BP28CT (NUC211) domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06530 AT3G06530 AT3G06530 AT3G06530 AT3G06530 |
| fragaria_vesca | FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 |
| malus_domestica | MD07G1249300.v1.1 |
| prunus_persica | Prupe.2G273000_v2.0.a1 Prupe.2G273000_v2.0.a1 Prupe.2G273000_v2.0.a1 |
| pyrus_communis | pycom01g18810 pycom01g18840 pycom05g24490 pycom07g22250 pycom07g22260 |
| rosa_chinensis | RchiOBHm_Chr1g0373711 RchiOBHm_Chr1g0373721 RchiOBHm_Chr5g0059891 RchiOBHm_Chr7g0224071 |
| rosa_laevigata | RLG00000026806 |
| rosa_multiflora | Rmu_co8395535.1_g000001 Rmu_sc0002606.1_g000003 Rmu_sc0002606.1_g000005 Rmu_sc0010519.1_g000004 Rmu_sc0023430.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00284050 Rroxscaffold_5G00353230 |
| rosa_rugosa | Rorug01G0379200 |
| rosa_samantha | Rh1AG388500 Rh1BG352900 Rh1CG365800 Rh1DG383300 Rh3AG266200 Rh3DG308600 |
| rosa_wichuraiana | Rw1G034670 Rw3G029530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2679 |
| AarI | CACCTGC | 1 cut(s) | 1934 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2435 |
| Acc36I | ACCTGC | 3 cut(s) | 1934, 2016, 4576 |
| AccB1I | GGYRCC | 2 cut(s) | 770, 1946 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 166, 3708 |
| AccBSI | CCGCTC | 2 cut(s) | 1340, 3422 |
| AccI | GTMKAC | 4 cut(s) | 4200, 5038, 5560, 5685 |
| AciI | CCGC | 6 cut(s) | 1340, 2198, 3422, 3433, 3863, 5765 |
| AclI | AACGTT | 1 cut(s) | 1819 |
| AclWI | GGATC | 7 cut(s) | 3231, 4086, 4357, 4370, 4502, 4815, 6131 |
| AcoI | YGGCCR | 3 cut(s) | 1922, 4747, 6214 |
| AdeI | CACNNNGTG | 2 cut(s) | 2502, 6290 |
| AfaI | GTAC | 8 cut(s) | 359, 389, 1101, 1395, 3714, 5427, 5497, 5904 |
| AfeI | AGCGCT | 1 cut(s) | 981 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 166, 1486, 1684, 3175, 3432, 3708, 4267, 6313, 6395 |
| AflIII | ACRYGT | 1 cut(s) | 1434 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1651, 3775 |
| AjiI | CACGTC | 1 cut(s) | 2257 |
| AjnI | CCWGG | 7 cut(s) | 1975, 2531, 2895, 3729, 3819, 4356, 6372 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 5538, 5570 |
| AleI | CACNNNNGTG | 1 cut(s) | 4371 |
| Alw21I | GWGCWC | 2 cut(s) | 520, 6423 |
| Alw44I | GTGCAC | 1 cut(s) | 516 |
| AlwI | GGATC | 7 cut(s) | 3231, 4086, 4357, 4370, 4502, 4815, 6131 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 3808, 5393, 5404, 6496 |
| Ama87I | CYCGRG | 4 cut(s) | 861, 3417, 4139, 5891 |
| Aor51HI | AGCGCT | 1 cut(s) | 981 |
| ApaLI | GTGCAC | 1 cut(s) | 516 |
| AseI | ATTAAT | 2 cut(s) | 282, 461 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 2468, 2553, 3697, 4554, 4893, 5486, 6384 |
| AspA2I | CCTAGG | 2 cut(s) | 5132, 5807 |
| AspLEI | GCGC | 3 cut(s) | 982, 3595, 3785 |
| AspS9I | GGNCC | 9 cut(s) | 78, 1216, 2164, 3668, 4116, 4996, 5129, 6303, 6316 |
| AsuHPI | GGTGA | 9 cut(s) | 2125, 2237, 2780, 3192, 3410, 4480, 5522, 6410, 6488 |
| AsuII | TTCGAA | 1 cut(s) | 448 |
| AsuNHI | GCTAGC | 3 cut(s) | 793, 1790, 2414 |
| AvaI | CYCGRG | 4 cut(s) | 861, 3417, 4139, 5891 |
| AvaII | GGWCC | 3 cut(s) | 1216, 4116, 6303 |
| AvrII | CCTAGG | 2 cut(s) | 5132, 5807 |
| BaeGI | GKGCMC | 3 cut(s) | 520, 3913, 5140 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 6017, 6050 |
| BalI | TGGCCA | 3 cut(s) | 1924, 4749, 6216 |
| BamHI | GGATCC | 1 cut(s) | 4362 |
| BanI | GGYRCC | 2 cut(s) | 770, 1946 |
| BanII | GRGCYC | 3 cut(s) | 1391, 2740, 6423 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1572, 1604, 3144, 3176 |
| BauI | CACGAG | 1 cut(s) | 5184 |
| BbsI | GAAGAC | 5 cut(s) | 2461, 3100, 3273, 3344, 5437 |
| Bbv12I | GWGCWC | 2 cut(s) | 520, 6423 |
| BbvCI | CCTCAGC | 2 cut(s) | 2927, 6485 |
| BceAI | ACGGC | 6 cut(s) | 49, 660, 1485, 5619, 5842, 6241 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 536, 570, 582, 616, 861, 895, 1950, 1984 |
| BciT130I | CCWGG | 7 cut(s) | 1977, 2533, 2897, 3731, 3821, 4358, 6374 |
| BciVI | GTATCC | 1 cut(s) | 4646 |
| BclI | TGATCA | 4 cut(s) | 921, 2935, 5115, 5395 |
| BfmI | CTRYAG | 8 cut(s) | 1123, 1331, 2235, 2562, 3302, 4089, 4608, 4698 |
| BfoI | RGCGCY | 1 cut(s) | 983 |
| BfuAI | ACCTGC | 3 cut(s) | 1934, 2016, 4576 |
| BfuI | GTATCC | 1 cut(s) | 4646 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 622 |
| BglII | AGATCT | 1 cut(s) | 1293 |
| BlnI | CCTAGG | 2 cut(s) | 5132, 5807 |
| BlpI | GCTNAGC | 1 cut(s) | 2882 |
| BmcAI | AGTACT | 1 cut(s) | 359 |
| Bme1390I | CCNGG | 7 cut(s) | 1977, 2533, 2897, 3731, 3821, 4358, 6374 |
| Bme18I | GGWCC | 3 cut(s) | 1216, 4116, 6303 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1651, 3775 |
| BmeT110I | CYCGRG | 4 cut(s) | 861, 3417, 4139, 5891 |
| BmgBI | CACGTC | 1 cut(s) | 2257 |
| BmgT120I | GGNCC | 9 cut(s) | 78, 1216, 2164, 3668, 4116, 4996, 5129, 6303, 6316 |
| BmiI | GGNNCC | 8 cut(s) | 670, 772, 1948, 3261, 3669, 4117, 4364, 6305 |
| BmrFI | CCNGG | 7 cut(s) | 1977, 2533, 2897, 3731, 3821, 4358, 6374 |
| BmrI | ACTGGG | 2 cut(s) | 16, 1700 |
| BmtI | GCTAGC | 3 cut(s) | 797, 1794, 2418 |
| BmuI | ACTGGG | 2 cut(s) | 16, 1700 |
| BpiI | GAAGAC | 5 cut(s) | 2461, 3100, 3273, 3344, 5437 |
| BpmI | CTGGAG | 6 cut(s) | 3112, 3197, 3246, 4583, 5943, 6252 |
| Bpu10I | CCTNAGC | 5 cut(s) | 1908, 2423, 2927, 3605, 6485 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2882 |
| Bpu14I | TTCGAA | 1 cut(s) | 448 |
| BpuEI | CTTGAG | 8 cut(s) | 374, 490, 752, 4434, 4828, 5071, 6428, 6437 |
| Bsa29I | ATCGAT | 3 cut(s) | 129, 135, 1803 |
| BsaAI | YACGTR | 1 cut(s) | 4369 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1611, 4148 |
| BsaI | GGTCTC | 3 cut(s) | 4790, 5865, 6458 |
| BsaWI | WCCGGW | 2 cut(s) | 3202, 5939 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 799, 829, 1904, 1934, 3344, 3374 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 166, 1486, 1684, 3175, 3432, 3708, 4267, 6313, 6395 |
| Bse118I | RCCGGY | 1 cut(s) | 4118 |
| Bse3DI | GCAATG | 6 cut(s) | 150, 554, 1850, 2007, 3046, 5700 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1611, 4148 |
| BseBI | CCWGG | 7 cut(s) | 1977, 2533, 2897, 3731, 3821, 4358, 6374 |
| BseCI | ATCGAT | 3 cut(s) | 129, 135, 1803 |
| BseJI | GATNNNNATC | 2 cut(s) | 1611, 4148 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 166, 1486, 1684, 3175, 3432, 3708, 4267, 6313, 6395 |
| BseMI | GCAATG | 6 cut(s) | 150, 554, 1850, 2007, 3046, 5700 |
| BseRI | GAGGAG | 2 cut(s) | 881, 2255 |
| BseSI | GKGCMC | 3 cut(s) | 520, 3913, 5140 |
| BsgI | GTGCAG | 3 cut(s) | 719, 2172, 5814 |
| BshNI | GGYRCC | 2 cut(s) | 770, 1946 |
| BshVI | ATCGAT | 3 cut(s) | 129, 135, 1803 |
| BsiHKAI | GWGCWC | 2 cut(s) | 520, 6423 |
| BsiHKCI | CYCGRG | 4 cut(s) | 861, 3417, 4139, 5891 |
| BsiSI | CCGG | 3 cut(s) | 3203, 4119, 5940 |
| BslFI | GGGAC | 5 cut(s) | 4, 1074, 2441, 4129, 6289 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 166, 1486, 1684, 3175, 3432, 3708, 4267, 6313, 6395 |
| BsmFI | GGGAC | 5 cut(s) | 4, 1074, 2441, 4129, 6289 |
| BsmI | GAATGC | 6 cut(s) | 1719, 1792, 3394, 3595, 4520, 5544 |
| Bso31I | GGTCTC | 3 cut(s) | 4790, 5865, 6458 |
| BsoBI | CYCGRG | 4 cut(s) | 861, 3417, 4139, 5891 |
| Bsp119I | TTCGAA | 1 cut(s) | 448 |
| Bsp1286I | GDGCHC | 6 cut(s) | 520, 1391, 2740, 3913, 5140, 6423 |
| Bsp1407I | TGTACA | 1 cut(s) | 387 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2882 |
| BspACI | CCGC | 6 cut(s) | 1340, 2198, 3422, 3433, 3863, 5765 |
| BspDI | ATCGAT | 3 cut(s) | 129, 135, 1803 |
| BspHI | TCATGA | 3 cut(s) | 1603, 4810, 5436 |
| BspLI | GGNNCC | 8 cut(s) | 670, 772, 1948, 3261, 3669, 4117, 4364, 6305 |
| BspMAI | CTGCAG | 2 cut(s) | 2566, 3306 |
| BspMI | ACCTGC | 3 cut(s) | 1934, 2016, 4576 |
| BspOI | GCTAGC | 3 cut(s) | 797, 1794, 2418 |
| BspPI | GGATC | 7 cut(s) | 3231, 4086, 4357, 4370, 4502, 4815, 6131 |
| BspQI | GCTCTTC | 1 cut(s) | 6150 |
| BspT104I | TTCGAA | 1 cut(s) | 448 |
| BspT107I | GGYRCC | 2 cut(s) | 770, 1946 |
| BspTNI | GGTCTC | 3 cut(s) | 4790, 5865, 6458 |
| BsrBI | CCGCTC | 2 cut(s) | 1340, 3422 |
| BsrDI | GCAATG | 6 cut(s) | 150, 554, 1850, 2007, 3046, 5700 |
| BsrFI | RCCGGY | 1 cut(s) | 4118 |
| BsrGI | TGTACA | 1 cut(s) | 387 |
| BssAI | RCCGGY | 1 cut(s) | 4118 |
| BssNAI | GTATAC | 2 cut(s) | 4201, 5686 |
| BssSI | CACGAG | 1 cut(s) | 5184 |
| BssT1I | CCWWGG | 6 cut(s) | 160, 1545, 2057, 5132, 5262, 5807 |
| Bst1107I | GTATAC | 2 cut(s) | 4201, 5686 |
| Bst2BI | CACGAG | 1 cut(s) | 5184 |
| Bst2UI | CCWGG | 7 cut(s) | 1977, 2533, 2897, 3731, 3821, 4358, 6374 |
| Bst6I | CTCTTC | 6 cut(s) | 107, 2610, 2755, 4262, 6091, 6150 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2318, 5108, 5699 |
| BstAUI | TGTACA | 1 cut(s) | 387 |
| BstBAI | YACGTR | 1 cut(s) | 4369 |
| BstBI | TTCGAA | 1 cut(s) | 448 |
| BstDSI | CCRYGG | 1 cut(s) | 6177 |
| BstEII | GGTNACC | 1 cut(s) | 5585 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1682 |
| BstH2I | RGCGCY | 1 cut(s) | 983 |
| BstHHI | GCGC | 3 cut(s) | 982, 3595, 3785 |
| BstNI | CCWGG | 7 cut(s) | 1977, 2533, 2897, 3731, 3821, 4358, 6374 |
| BstPI | GGTNACC | 1 cut(s) | 5585 |
| BstSCI | CCNGG | 7 cut(s) | 1975, 2531, 2895, 3729, 3819, 4356, 6372 |
| BstSFI | CTRYAG | 8 cut(s) | 1123, 1331, 2235, 2562, 3302, 4089, 4608, 4698 |
| BstSLI | GKGCMC | 3 cut(s) | 520, 3913, 5140 |
| BstV2I | GAAGAC | 5 cut(s) | 2461, 3100, 3273, 3344, 5437 |
| BstX2I | RGATCY | 5 cut(s) | 1293, 4078, 4362, 4507, 6136 |
| BstYI | RGATCY | 5 cut(s) | 1293, 4078, 4362, 4507, 6136 |
| BstZ17I | GTATAC | 2 cut(s) | 4201, 5686 |
| Bsu15I | ATCGAT | 3 cut(s) | 129, 135, 1803 |
| BsuI | GTATCC | 1 cut(s) | 4646 |
| BsuTUI | ATCGAT | 3 cut(s) | 129, 135, 1803 |
| BtgI | CCRYGG | 1 cut(s) | 6177 |
| BtgZI | GCGATG | 3 cut(s) | 1953, 2387, 4493 |
| BtrI | CACGTC | 1 cut(s) | 2257 |
| BtsI | GCAGTG | 2 cut(s) | 5085, 6295 |
| BveI | ACCTGC | 3 cut(s) | 1934, 2016, 4576 |
| CaiI | CAGNNNCTG | 4 cut(s) | 3808, 5393, 5404, 6496 |
| CciI | TCATGA | 3 cut(s) | 1603, 4810, 5436 |
| CfoI | GCGC | 3 cut(s) | 982, 3595, 3785 |
| Cfr10I | RCCGGY | 1 cut(s) | 4118 |
| Cfr13I | GGNCC | 9 cut(s) | 78, 1216, 2164, 3668, 4116, 4996, 5129, 6303, 6316 |
| ClaI | ATCGAT | 3 cut(s) | 129, 135, 1803 |
| CseI | GACGC | 7 cut(s) | 6, 116, 2134, 3105, 3475, 3814, 5373 |
| Csp6I | GTAC | 8 cut(s) | 358, 388, 1100, 1394, 3713, 5426, 5496, 5903 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 664, 699, 5460, 5495 |
| CviQI | GTAC | 8 cut(s) | 358, 388, 1100, 1394, 3713, 5426, 5496, 5903 |
| DraIII | CACNNNGTG | 2 cut(s) | 2502, 6290 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2435 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1651, 3775 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2435 |
| EaeI | YGGCCR | 3 cut(s) | 1922, 4747, 6214 |
| Eam1104I | CTCTTC | 6 cut(s) | 107, 2610, 2755, 4262, 6091, 6150 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1651, 3775 |
| EarI | CTCTTC | 6 cut(s) | 107, 2610, 2755, 4262, 6091, 6150 |
| EciI | GGCGGA | 3 cut(s) | 2213, 3878, 5780 |
| Ecl136II | GAGCTC | 1 cut(s) | 6421 |
| Eco130I | CCWWGG | 6 cut(s) | 160, 1545, 2057, 5132, 5262, 5807 |
| Eco147I | AGGCCT | 2 cut(s) | 616, 625 |
| Eco24I | GRGCYC | 3 cut(s) | 1391, 2740, 6423 |
| Eco31I | GGTCTC | 3 cut(s) | 4790, 5865, 6458 |
| Eco32I | GATATC | 4 cut(s) | 127, 133, 1585, 2386 |
| Eco47I | GGWCC | 3 cut(s) | 1216, 4116, 6303 |
| Eco47III | AGCGCT | 1 cut(s) | 981 |
| Eco53kI | GAGCTC | 1 cut(s) | 6421 |
| Eco88I | CYCGRG | 4 cut(s) | 861, 3417, 4139, 5891 |
| Eco91I | GGTNACC | 1 cut(s) | 5585 |
| EcoICRI | GAGCTC | 1 cut(s) | 6421 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1682 |
| EcoO109I | RGGNCCY | 2 cut(s) | 78, 1216 |
| EcoO65I | GGTNACC | 1 cut(s) | 5585 |
| EcoRI | GAATTC | 2 cut(s) | 2974, 4879 |
| EcoRII | CCWGG | 7 cut(s) | 1975, 2531, 2895, 3729, 3819, 4356, 6372 |
| EcoRV | GATATC | 4 cut(s) | 127, 133, 1585, 2386 |
| EcoT14I | CCWWGG | 6 cut(s) | 160, 1545, 2057, 5132, 5262, 5807 |
| EcoT22I | ATGCAT | 5 cut(s) | 595, 4308, 4391, 4677, 5070 |
| EcoT38I | GRGCYC | 3 cut(s) | 1391, 2740, 6423 |
| ErhI | CCWWGG | 6 cut(s) | 160, 1545, 2057, 5132, 5262, 5807 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 65, 97, 200, 232, 1280, 1312, 2453, 2485 |
| FaqI | GGGAC | 5 cut(s) | 4, 1074, 2441, 4129, 6289 |
| FbaI | TGATCA | 4 cut(s) | 921, 2935, 5115, 5395 |
| FblI | GTMKAC | 4 cut(s) | 4200, 5038, 5560, 5685 |
| FriOI | GRGCYC | 3 cut(s) | 1391, 2740, 6423 |
| GlaI | GCGC | 3 cut(s) | 981, 3594, 3784 |
| GsuI | CTGGAG | 6 cut(s) | 3112, 3197, 3246, 4583, 5943, 6252 |
| HaeII | RGCGCY | 1 cut(s) | 983 |
| HapII | CCGG | 3 cut(s) | 3203, 4119, 5940 |
| HgaI | GACGC | 7 cut(s) | 6, 116, 2134, 3105, 3475, 3814, 5373 |
| HhaI | GCGC | 3 cut(s) | 982, 3595, 3785 |
| Hin6I | GCGC | 3 cut(s) | 980, 3593, 3783 |
| HinP1I | GCGC | 3 cut(s) | 980, 3593, 3783 |
| HincII | GTYRAC | 5 cut(s) | 685, 2746, 3484, 3537, 5639 |
| HindII | GTYRAC | 5 cut(s) | 685, 2746, 3484, 3537, 5639 |
| HindIII | AAGCTT | 6 cut(s) | 2801, 3005, 3308, 3680, 4526, 6067 |
| HpaI | GTTAAC | 1 cut(s) | 3537 |
| HpaII | CCGG | 3 cut(s) | 3203, 4119, 5940 |
| HphI | GGTGA | 9 cut(s) | 2125, 2237, 2780, 3192, 3410, 4480, 5522, 6410, 6488 |
| Hpy99I | CGWCG | 2 cut(s) | 70, 110 |
| HpyCH4IV | ACGT | 4 cut(s) | 1819, 2256, 4368, 5905 |
| HpySE526I | ACGT | 4 cut(s) | 1819, 2256, 4368, 5905 |
| HspAI | GCGC | 3 cut(s) | 980, 3593, 3783 |
| Ksp22I | TGATCA | 4 cut(s) | 921, 2935, 5115, 5395 |
| KspAI | GTTAAC | 1 cut(s) | 3537 |
| LguI | GCTCTTC | 1 cut(s) | 6150 |
| MaeII | ACGT | 4 cut(s) | 1819, 2256, 4368, 5905 |
| MbiI | CCGCTC | 2 cut(s) | 1340, 3422 |
| MfeI | CAATTG | 1 cut(s) | 846 |
| MflI | RGATCY | 5 cut(s) | 1293, 4078, 4362, 4507, 6136 |
| MhlI | GDGCHC | 6 cut(s) | 520, 1391, 2740, 3913, 5140, 6423 |
| MlsI | TGGCCA | 3 cut(s) | 1924, 4749, 6216 |
| MluNI | TGGCCA | 3 cut(s) | 1924, 4749, 6216 |
| MmeI | TCCRAC | 5 cut(s) | 1086, 1398, 1977, 3228, 4739 |
| Mox20I | TGGCCA | 3 cut(s) | 1924, 4749, 6216 |
| Mph1103I | ATGCAT | 5 cut(s) | 595, 4308, 4391, 4677, 5070 |
| MroXI | GAANNNNTTC | 7 cut(s) | 2468, 2553, 3697, 4554, 4893, 5486, 6384 |
| MscI | TGGCCA | 3 cut(s) | 1924, 4749, 6216 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1608, 1724, 3620, 4371 |
| Msp20I | TGGCCA | 3 cut(s) | 1924, 4749, 6216 |
| MspI | CCGG | 3 cut(s) | 3203, 4119, 5940 |
| MspR9I | CCNGG | 7 cut(s) | 1977, 2533, 2897, 3731, 3821, 4358, 6374 |
| MunI | CAATTG | 1 cut(s) | 846 |
| Mva1269I | GAATGC | 6 cut(s) | 1719, 1792, 3394, 3595, 4520, 5544 |
| MvaI | CCWGG | 7 cut(s) | 1977, 2533, 2897, 3731, 3821, 4358, 6374 |
| NheI | GCTAGC | 3 cut(s) | 793, 1790, 2414 |
| NlaIV | GGNNCC | 8 cut(s) | 670, 772, 1948, 3261, 3669, 4117, 4364, 6305 |
| NmuCI | GTSAC | 8 cut(s) | 1437, 1502, 2494, 4039, 5290, 6226, 6239, 6290 |
| NsiI | ATGCAT | 5 cut(s) | 595, 4308, 4391, 4677, 5070 |
| NspV | TTCGAA | 1 cut(s) | 448 |
| OliI | CACNNNNGTG | 1 cut(s) | 4371 |
| PaeI | GCATGC | 2 cut(s) | 4310, 4675 |
| PaeR7I | CTCGAG | 4 cut(s) | 861, 3417, 4139, 5891 |
| PagI | TCATGA | 3 cut(s) | 1603, 4810, 5436 |
| PaqCI | CACCTGC | 1 cut(s) | 1934 |
| PasI | CCCWGGG | 1 cut(s) | 4357 |
| PceI | AGGCCT | 2 cut(s) | 616, 625 |
| PciI | ACATGT | 1 cut(s) | 1434 |
| PciSI | GCTCTTC | 1 cut(s) | 6150 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2253 |
| PctI | GAATGC | 6 cut(s) | 1719, 1792, 3394, 3595, 4520, 5544 |
| PdmI | GAANNNNTTC | 7 cut(s) | 2468, 2553, 3697, 4554, 4893, 5486, 6384 |
| PflFI | GACNNNGTC | 2 cut(s) | 3099, 4817 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 166, 3708 |
| PfoI | TCCNGGA | 2 cut(s) | 3729, 3819 |
| Ppu21I | YACGTR | 1 cut(s) | 4369 |
| PpuMI | RGGWCCY | 1 cut(s) | 1216 |
| PscI | ACATGT | 1 cut(s) | 1434 |
| PshBI | ATTAAT | 2 cut(s) | 282, 461 |
| PsiI | TTATAA | 1 cut(s) | 2679 |
| Psp124BI | GAGCTC | 1 cut(s) | 6423 |
| Psp1406I | AACGTT | 1 cut(s) | 1819 |
| Psp5II | RGGWCCY | 1 cut(s) | 1216 |
| Psp6I | CCWGG | 7 cut(s) | 1975, 2531, 2895, 3729, 3819, 4356, 6372 |
| PspEI | GGTNACC | 1 cut(s) | 5585 |
| PspGI | CCWGG | 7 cut(s) | 1975, 2531, 2895, 3729, 3819, 4356, 6372 |
| PspN4I | GGNNCC | 8 cut(s) | 670, 772, 1948, 3261, 3669, 4117, 4364, 6305 |
| PspPI | GGNCC | 9 cut(s) | 78, 1216, 2164, 3668, 4116, 4996, 5129, 6303, 6316 |
| PspPPI | RGGWCCY | 1 cut(s) | 1216 |
| PspXI | VCTCGAGB | 2 cut(s) | 3417, 5891 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3705, 3737 |
| PstI | CTGCAG | 2 cut(s) | 2566, 3306 |
| PstNI | CAGNNNCTG | 4 cut(s) | 3808, 5393, 5404, 6496 |
| PsuI | RGATCY | 5 cut(s) | 1293, 4078, 4362, 4507, 6136 |
| PsyI | GACNNNGTC | 2 cut(s) | 3099, 4817 |
| RsaI | GTAC | 8 cut(s) | 359, 389, 1101, 1395, 3714, 5427, 5497, 5904 |
| RsaNI | GTAC | 8 cut(s) | 358, 388, 1100, 1394, 3713, 5426, 5496, 5903 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1608, 1724, 3620, 4371 |
| SacI | GAGCTC | 1 cut(s) | 6423 |
| SapI | GCTCTTC | 1 cut(s) | 6150 |
| Sau96I | GGNCC | 9 cut(s) | 78, 1216, 2164, 3668, 4116, 4996, 5129, 6303, 6316 |
| ScaI | AGTACT | 1 cut(s) | 359 |
| ScrFI | CCNGG | 7 cut(s) | 1977, 2533, 2897, 3731, 3821, 4358, 6374 |
| SduI | GDGCHC | 6 cut(s) | 520, 1391, 2740, 3913, 5140, 6423 |
| SfcI | CTRYAG | 8 cut(s) | 1123, 1331, 2235, 2562, 3302, 4089, 4608, 4698 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 622 |
| Sfr274I | CTCGAG | 4 cut(s) | 861, 3417, 4139, 5891 |
| SfuI | TTCGAA | 1 cut(s) | 448 |
| SinI | GGWCC | 3 cut(s) | 1216, 4116, 6303 |
| SlaI | CTCGAG | 4 cut(s) | 861, 3417, 4139, 5891 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1608, 1724, 3620, 4371 |
| SphI | GCATGC | 2 cut(s) | 4310, 4675 |
| SseBI | AGGCCT | 2 cut(s) | 616, 625 |
| SsiI | CCGC | 6 cut(s) | 1340, 2198, 3422, 3433, 3863, 5765 |
| SspI | AATATT | 8 cut(s) | 1081, 2280, 2326, 3442, 4382, 5487, 5662, 6335 |
| SstI | GAGCTC | 1 cut(s) | 6423 |
| StuI | AGGCCT | 2 cut(s) | 616, 625 |
| StyD4I | CCNGG | 7 cut(s) | 1975, 2531, 2895, 3729, 3819, 4356, 6372 |
| StyI | CCWWGG | 6 cut(s) | 160, 1545, 2057, 5132, 5262, 5807 |
| TaiI | ACGT | 4 cut(s) | 1822, 2259, 4371, 5908 |
| TaqII | GACCGA | 3 cut(s) | 58, 5847, 6291 |
| TatI | WGTACW | 3 cut(s) | 357, 387, 1393 |
| TauI | GCSGC | 1 cut(s) | 3425 |
| TseFI | GTSAC | 8 cut(s) | 1437, 1502, 2494, 4039, 5290, 6226, 6239, 6290 |
| Tsp45I | GTSAC | 8 cut(s) | 1437, 1502, 2494, 4039, 5290, 6226, 6239, 6290 |
| TspGWI | ACGGA | 5 cut(s) | 31, 2640, 3549, 4250, 6166 |
| Tth111I | GACNNNGTC | 2 cut(s) | 3099, 4817 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 166, 3708 |
| VneI | GTGCAC | 1 cut(s) | 516 |
| VpaK11BI | GGWCC | 3 cut(s) | 1216, 4116, 6303 |
| VspI | ATTAAT | 2 cut(s) | 282, 461 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1682 |
| XbaI | TCTAGA | 4 cut(s) | 4870, 4984, 5341, 6151 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2014, 6391 |
| XhoI | CTCGAG | 4 cut(s) | 861, 3417, 4139, 5891 |
| XmaJI | CCTAGG | 2 cut(s) | 5132, 5807 |
| XmiI | GTMKAC | 4 cut(s) | 4200, 5038, 5560, 5685 |
| XmnI | GAANNNNTTC | 7 cut(s) | 2468, 2553, 3697, 4554, 4893, 5486, 6384 |
| ZrmI | AGTACT | 1 cut(s) | 359 |
| Zsp2I | ATGCAT | 5 cut(s) | 595, 4308, 4391, 4677, 5070 |