Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002606.1

Orthogroup ID

OG0002105

Physical Location & Seq

Genomic Coordinates Forward (+)

10608 .. 22154

Gene Structure 11547 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002606.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4077 bp

atggcgacctcgattgcgtcccagttaaaagtcctgaaatcgctgatacaagtcgaccaagacccgtcgcagaagcggcccttcactcgcccttcgatcctcttcgaccccaaagaggccgccgatatcgacatcgacacaattttcgccgtaggacttcaaggtcttgagcttcttgttagtaccgacgagcggttccgaaactttaagagtgacttgttcagctaccagagtaaggaattggatagagagttgatgggagtagaggaaaacaaacgcattgatgcttcgattagtaagtacttgagattgctgtcagggcatttcgagctcccatcgtcactcaagactctcgagtacttggtgcgaagatataagattcatgtgtacaacttcgaggaattgattttgtgtgctctgccgtaccatgagacccatgcatttgttaaaattgttcaattaattaactttggaaatagtaagtggaaatttttagagggcgtgaaagtttctggtgcagcgccacctagaaatgttatagtgcagcaatgtattcgtgacatgggggttttggaggctttattcgactatgcatccccgtcaaagaagtatcggccttcaaagcccgtgatcagattttgcacggcagttgttgttgaggttatgggttctgttgcatctgttgaaagtcatgttgtgaaaagaatctgttcacttattcattctgtacttgaggttggcacggatggacattcagaaaacaaggctggtgctatgatgattgttggtatgctagcaagtaaagttacaatatgtcccggacttgtcaagggattgattttattaattgctaaagttgctgaagaggatgcaaaagagtcagctgatcttcagctttttcacttatcacttatgactttgatcaaccttgttcagttgcaagttgtggataagtttcccatgaaggctctgaagagtttgatcggcattagggattttgctggcatccttctgggacttttcaacaagttcaaaattgatagattcctttccgtgcttttggattctcttgttgactatagttcgtctgatgaatcttgccagcttgcgttgatctccatattagatacagttccttccaagaattttgttcatcatgtagttccaaaggtcctatcttcctgcttgcaaaagtcacaggacatggaaaattcaacattattttcatcaggaagctgggcagagaaagttttactcattcttagaagatatccatctgaactgcatggagctgctcacaaatttctggaaaagaatgtgcaatctaagaaacggggttcggtacatgaagctctgcgtaaaatgttggatgggaatttggacaggtcactagcttgctcagaatcaaatttttggttcaggttgcatcatccagaggctgatgttcgtcgccgtacactttctgaaataaggacatcaggtcttctggaagccaagggtacaaattcgcagagtcttgtaatcatccaagatggcatattgcgacagcttcaggatgatgatcttagcgttgtcagagcggctttgtcgttagacagattgtccagtttaataaacccatctgatcttattgaagtactggacaatctgcttagaagatgcattggtcttttaacaaggtcattggagaacaatagcctagcatgtgatgttgctattttgtgcctaaagaatgctgttgctgacatccatgagaatgttgaatgttgcaataaactagctgctatgatatttcctttgctccttgttgtacctaagacacagaggttaaatttgaaagcattggaattagctaaggcagtaaaatggccactgtttgagaatcttgctgctgcatgcaatacagaacaagtcgagagtcttcactgtttttcctatctgtgtcttcaatcagaagttagattgccaattcaatttcttgctgaatttccatctcttcttgttccactggctagttgtaaccaggagataagaaatgttgccatgaattgtgttgagggtttacagaccttttcatctcatgttgactctttgagcaagaaaaatggaaaccgtgcaattcggattaatcatcttgataagctgctggacttgttggtccagcagaaaaggctaatcctatcggacaggaacttgcttccttctctcttggcctctttgctcagcccgtccttccagagcttcttaggaccaaagaatattgagataaggtttgatcaatctacaagagaagagattcttactttcatgttgaattctgccatgaaactgcctgattatgcaaggcttgctattctttctttgcttagaggaacaggcaatgccattatacatcataaagaagttaagtcatatttatctcatctcttggaaagacgcagtcggagtttgtcaaaaattgaagttcagatattatgccttctactggagtgttgtgcagtgccttcttcatcagacgggcatgtatttgaggaccatttattggaggctttgcaattggatggcttggctccagaagacgcttccaccatacagccttgtattactgtcctgcaaaagcttaatagccaaatttacagtggactgaagactgaagtgcaggagcttttgttccgaaaactggttgctgtgtttcagaattcaaatggggacatacaaaatgcaactagagcagccttgcagcgtttacatattacttgctccactatcgtccacactctcgatcacatactcaaagatggaagttgtgcaagtcgttcagtgcacggaacaaagaaaatgaaacgtcagaagtccacttcgtctagtgacgtgatacgtgacggagaaaatgcactctctttacttggttccctccttggtattttattatttaagaaagacatagagaagagggactctctattggggccgttgtttaagcttctttacaaaaccttttccaatgagtgggtacaggaccacttcagcatttctgatgccaggttgagcacagtaaattacatacaacagacactgctgataatcttagaagatatcagttcttcactaataagttctattccactggaggacaacatggtaaatgagattaatgtcaaacatttggttgagtgtgcccattctgcgaaggatggagttactcgcaaccatgtcttttcactgatttcctccatcacaaagatcgttccagaaaaagttttggagcatatgctggatatctttgctgttattggagagtcagcagtcacacagattgatagccattcacagcgtgtgtttgaggatcttttatctacagttgttccttgttggctgtctggggcaggcagcaacgacaaattgctgcagatttttgttaatgtactgcctgaagttgctgaatatagaaggctctcaattgttgtgtacctactgaggactttgggagagtcaaatagcttggcttcattacttgttcttcttttccgttcactaatttcaagaaaagggtcatcttggtttgataatgtgcatgcttcagatagctccacaacctctttacagagagagtgggagtatgccctagcgcttcaaatatgtgagcaatattcatgtatgatatggcttccccctcttgttatgctgcttaaacaaatggaaactggtcaagaggtatttagagaattgttaattgcaatgcggttcaccttgcataagctgcaagatcccgagtttgcgctcaagatggcatctggggaagagtcggacaaaattcaggctacattgggagaactcatggagcaggttgtctctctccagcaactggtagatgcaagaaggaaggataaaaatatcaatgtcattaggaaagatttgaaggagtgtatgcatgctgtaatgagggctattactggggtcatgaacccttcgacactctttaatggcataactaagttgcttggccacagagatcaaaatgtggaaaagaaggtagttattgcatatttcaatgttctactcattttgtcagtttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006355 GO:0006356 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034455 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

BP28CT U3snoRNP10

Protein Analysis

1358

Amino Acids

152.06

Weight (kDa)

7.54

Isoelectric Point (pI)

46.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06530 AT3G06530 AT3G06530 AT3G06530 AT3G06530
fragaria_vesca	FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990
malus_domestica	MD07G1249300.v1.1
prunus_persica	Prupe.2G273000_v2.0.a1 Prupe.2G273000_v2.0.a1 Prupe.2G273000_v2.0.a1
pyrus_communis	pycom01g18810 pycom01g18840 pycom05g24490 pycom07g22250 pycom07g22260
rosa_chinensis	RchiOBHm_Chr1g0373711 RchiOBHm_Chr1g0373721 RchiOBHm_Chr5g0059891 RchiOBHm_Chr7g0224071
rosa_laevigata	RLG00000026806
rosa_multiflora	Rmu_co8395535.1_g000001 Rmu_sc0002606.1_g000003 Rmu_sc0002606.1_g000005 Rmu_sc0010519.1_g000004 Rmu_sc0023430.1_g000002
rosa_roxburghii	Rroxscaffold_4G00284050 Rroxscaffold_5G00353230
rosa_rugosa	Rorug01G0379200
rosa_samantha	Rh1AG388500 Rh1BG352900 Rh1CG365800 Rh1DG383300 Rh3AG266200 Rh3DG308600
rosa_wichuraiana	Rw1G034670 Rw3G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	162, 2156
Acc36I	ACCTGC	1 cut(s)	3835
AccB7I	CCANNNNNTGG	3 cut(s)	2542, 3009, 3865
AccBSI	CCGCTC	2 cut(s)	193, 1580
AccI	GTMKAC	1 cut(s)	54
AciI	CCGC	5 cut(s)	76, 120, 193, 1580, 3742
AclWI	GGATC	3 cut(s)	91, 3354, 3761
AcoI	YGGCCR	2 cut(s)	1868, 4003
AcuI	CTGAAG	9 cut(s)	875, 882, 992, 1535, 2666, 2673, 3010, 3453, 3564
AdeI	CACNNNGTG	1 cut(s)	3335
AfeI	AGCGCT	1 cut(s)	3630
AfiI	CCNNNNNNNGG	8 cut(s)	115, 192, 235, 2485, 2542, 2680, 3009, 3865
AhdI	GACNNNNNGTC	2 cut(s)	1479, 1600
AjiI	CACGTC	1 cut(s)	2872
AjnI	CCWGG	2 cut(s)	2022, 3041
AloI	GAACNNNNNNTCC	2 cut(s)	2654, 2686
Alw21I	GWGCWC	4 cut(s)	333, 418, 2826, 3053
Alw26I	GTCTC	2 cut(s)	425, 3856
Alw44I	GTGCAC	1 cut(s)	2822
AlwI	GGATC	3 cut(s)	91, 3354, 3761
AlwNI	CAGNNNCTG	3 cut(s)	1439, 3076, 3865
Ama87I	CYCGRG	2 cut(s)	353, 3770
Aor51HI	AGCGCT	1 cut(s)	3630
AoxI	GGCC	7 cut(s)	77, 117, 614, 1868, 2211, 2969, 4003
ApaLI	GTGCAC	1 cut(s)	2822
ArsI	GACNNNNNNTTYG	2 cut(s)	128, 160
AseI	ATTAAT	4 cut(s)	461, 845, 2127, 3153
Asp700I	GAANNNNTTC	2 cut(s)	709, 2295
AspLEI	GCGC	3 cut(s)	523, 3631, 3781
AspS9I	GGNCC	7 cut(s)	78, 1171, 2158, 2249, 2533, 2969, 3019
AsuC2I	CCSGG	1 cut(s)	819
AsuHPI	GGTGA	1 cut(s)	3739
AsuNHI	GCTAGC	1 cut(s)	793
AvaI	CYCGRG	2 cut(s)	353, 3770
AvaII	GGWCC	5 cut(s)	1171, 2158, 2249, 2533, 3019
BaeGI	GKGCMC	2 cut(s)	2826, 3181
BalI	TGGCCA	2 cut(s)	1870, 4005
BanII	GRGCYC	1 cut(s)	333
BbsI	GAAGAC	5 cut(s)	1475, 1913, 1937, 2583, 2654
Bbv12I	GWGCWC	4 cut(s)	333, 418, 2826, 3053
BceAI	ACGGC	5 cut(s)	134, 406, 660, 1437, 2956
BcgI	CGANNNNNNTGC	2 cut(s)	536, 570
BciT130I	CCWGG	2 cut(s)	2024, 3043
BclI	TGATCA	3 cut(s)	630, 921, 2275
BcnI	CCSGG	1 cut(s)	819
BcoDI	GTCTC	2 cut(s)	425, 3856
BfaI	CTAG	9 cut(s)	528, 794, 1391, 1700, 1778, 2013, 2727, 2865, 3626
BfmI	CTRYAG	3 cut(s)	1078, 3357, 3407
BfoI	RGCGCY	2 cut(s)	524, 3632
BfuAI	ACCTGC	1 cut(s)	3835
BlpI	GCTNAGC	1 cut(s)	2222
BmcAI	AGTACT	3 cut(s)	302, 359, 1638
Bme1390I	CCNGG	3 cut(s)	819, 2024, 3043
Bme18I	GGWCC	5 cut(s)	1171, 2158, 2249, 2533, 3019
BmeRI	GACNNNNNGTC	2 cut(s)	1479, 1600
BmeT110I	CYCGRG	2 cut(s)	353, 3770
BmgBI	CACGTC	1 cut(s)	2872
BmgT120I	GGNCC	7 cut(s)	78, 1171, 2158, 2249, 2533, 2969, 3019
BmiI	GGNNCC	4 cut(s)	197, 2571, 2911, 2970
BmrFI	CCNGG	3 cut(s)	819, 2024, 3043
BmrI	ACTGGG	2 cut(s)	16, 3963
BmtI	GCTAGC	1 cut(s)	797
BmuI	ACTGGG	2 cut(s)	16, 3963
BpiI	GAAGAC	5 cut(s)	1475, 1913, 1937, 2583, 2654
BplI	GAGNNNNNCTC	2 cut(s)	2944, 2976
BpmI	CTGGAG	4 cut(s)	2507, 2556, 3149, 3842
Bpu10I	CCTNAGC	1 cut(s)	1854
Bpu1102I	GCTNAGC	1 cut(s)	2222
BpuEI	CTTGAG	5 cut(s)	188, 325, 329, 752, 3767
BpuMI	CCSGG	1 cut(s)	819
BsaAI	YACGTR	1 cut(s)	2879
BsaBI	GATNNNNATC	2 cut(s)	1273, 1560
BsaI	GGTCTC	1 cut(s)	425
BsaJI	CCNNGG	2 cut(s)	1494, 2917
BsaXI	ACNNNNNCTCC	2 cut(s)	2654, 2684
Bsc4I	CCNNNNNNNGG	8 cut(s)	115, 192, 235, 2485, 2542, 2680, 3009, 3865
Bse3DI	GCAATG	3 cut(s)	554, 2386, 3744
Bse8I	GATNNNNATC	2 cut(s)	1273, 1560
BseBI	CCWGG	2 cut(s)	2024, 3043
BseDI	CCNNGG	2 cut(s)	1494, 2917
BseJI	GATNNNNATC	2 cut(s)	1273, 1560
BseLI	CCNNNNNNNGG	8 cut(s)	115, 192, 235, 2485, 2542, 2680, 3009, 3865
BseMI	GCAATG	3 cut(s)	554, 2386, 3744
BseMII	CTCAG	3 cut(s)	1413, 2236, 3467
BseSI	GKGCMC	2 cut(s)	2826, 3181
BseYI	CCCAGC	1 cut(s)	1236
BsgI	GTGCAG	4 cut(s)	537, 563, 2517, 2678
BshFI	GGCC	7 cut(s)	79, 119, 616, 1870, 2213, 2971, 4005
BsiHKAI	GWGCWC	4 cut(s)	333, 418, 2826, 3053
BsiHKCI	CYCGRG	2 cut(s)	353, 3770
BsiSI	CCGG	1 cut(s)	819
BslFI	GGGAC	5 cut(s)	4, 801, 1029, 2723, 2969
BslI	CCNNNNNNNGG	8 cut(s)	115, 192, 235, 2485, 2542, 2680, 3009, 3865
BsmAI	GTCTC	2 cut(s)	425, 3856
BsmFI	GGGAC	5 cut(s)	4, 801, 1029, 2723, 2969
BsmI	GAATGC	1 cut(s)	1738
BsnI	GGCC	7 cut(s)	79, 119, 616, 1870, 2213, 2971, 4005
Bso31I	GGTCTC	1 cut(s)	425
BsoBI	CYCGRG	2 cut(s)	353, 3770
Bsp1286I	GDGCHC	5 cut(s)	333, 418, 2826, 3053, 3181
Bsp1407I	TGTACA	1 cut(s)	387
Bsp1720I	GCTNAGC	1 cut(s)	2222
BspACI	CCGC	5 cut(s)	76, 120, 193, 1580, 3742
BspANI	GGCC	7 cut(s)	79, 119, 616, 1870, 2213, 2971, 4005
BspCNI	CTCAG	3 cut(s)	1412, 2235, 3468
BspHI	TCATGA	1 cut(s)	3960
BspLI	GGNNCC	4 cut(s)	197, 2571, 2911, 2970
BspMAI	CTGCAG	1 cut(s)	3411
BspMI	ACCTGC	1 cut(s)	3835
BspOI	GCTAGC	1 cut(s)	797
BspPI	GGATC	3 cut(s)	91, 3354, 3761
BspTNI	GGTCTC	1 cut(s)	425
BsrBI	CCGCTC	2 cut(s)	193, 1580
BsrDI	GCAATG	3 cut(s)	554, 2386, 3744
BsrGI	TGTACA	1 cut(s)	387
BssECI	CCNNGG	2 cut(s)	1494, 2917
BssT1I	CCWWGG	2 cut(s)	1494, 2917
Bst2UI	CCWGG	2 cut(s)	2024, 3043
Bst4CI	ACNGT	8 cut(s)	1132, 1875, 1928, 2114, 2608, 2639, 3055, 3361
Bst6I	CTCTTC	7 cut(s)	107, 858, 968, 2001, 2286, 2945, 3795
BstAPI	GCANNNNNTGC	2 cut(s)	2348, 3760
BstAUI	TGTACA	1 cut(s)	387
BstBAI	YACGTR	1 cut(s)	2879
BstH2I	RGCGCY	2 cut(s)	524, 3632
BstHHI	GCGC	3 cut(s)	523, 3631, 3781
BstMAI	GTCTC	2 cut(s)	425, 3856
BstNI	CCWGG	2 cut(s)	2024, 3043
BstNSI	RCATGY	5 cut(s)	1707, 1899, 2525, 3578, 3935
BstSCI	CCNGG	3 cut(s)	817, 2022, 3041
BstSFI	CTRYAG	3 cut(s)	1078, 3357, 3407
BstSLI	GKGCMC	2 cut(s)	2826, 3181
BstV2I	GAAGAC	5 cut(s)	1475, 1913, 1937, 2583, 2654
BstX2I	RGATCY	2 cut(s)	3346, 3766
BstYI	RGATCY	2 cut(s)	3346, 3766
BsuRI	GGCC	7 cut(s)	79, 119, 616, 1870, 2213, 2971, 4005
BtrI	CACGTC	1 cut(s)	2872
BtsI	GCAGTG	2 cut(s)	2505, 3074
BtsIMutI	CAGTG	9 cut(s)	1871, 1924, 2006, 2505, 2644, 2826, 3074, 3125, 3221
BveI	ACCTGC	1 cut(s)	3835
CaiI	CAGNNNCTG	3 cut(s)	1439, 3076, 3865
CciI	TCATGA	1 cut(s)	3960
CfoI	GCGC	3 cut(s)	523, 3631, 3781
Cfr13I	GGNCC	7 cut(s)	78, 1171, 2158, 2249, 2533, 2969, 3019
CseI	GACGC	3 cut(s)	6, 2445, 2588
DraIII	CACNNNGTG	1 cut(s)	3335
DrdI	GACNNNNNNGTC	2 cut(s)	162, 2156
DriI	GACNNNNNGTC	2 cut(s)	1479, 1600
DseDI	GACNNNNNNGTC	2 cut(s)	162, 2156
EaeI	YGGCCR	2 cut(s)	1868, 4003
Eam1104I	CTCTTC	7 cut(s)	107, 858, 968, 2001, 2286, 2945, 3795
Eam1105I	GACNNNNNGTC	2 cut(s)	1479, 1600
EarI	CTCTTC	7 cut(s)	107, 858, 968, 2001, 2286, 2945, 3795
Ecl136II	GAGCTC	1 cut(s)	331
Eco130I	CCWWGG	2 cut(s)	1494, 2917
Eco24I	GRGCYC	1 cut(s)	333
Eco31I	GGTCTC	1 cut(s)	425
Eco32I	GATATC	4 cut(s)	127, 1271, 3097, 3280
Eco47I	GGWCC	5 cut(s)	1171, 2158, 2249, 2533, 3019
Eco47III	AGCGCT	1 cut(s)	3630
Eco53kI	GAGCTC	1 cut(s)	331
Eco57I	CTGAAG	9 cut(s)	875, 882, 992, 1535, 2666, 2673, 3010, 3453, 3564
Eco88I	CYCGRG	2 cut(s)	353, 3770
EcoICRI	GAGCTC	1 cut(s)	331
EcoO109I	RGGNCCY	1 cut(s)	1171
EcoRI	GAATTC	2 cut(s)	2314, 2698
EcoRII	CCWGG	2 cut(s)	2022, 3041
EcoRV	GATATC	4 cut(s)	127, 1271, 3097, 3280
EcoT14I	CCWWGG	2 cut(s)	1494, 2917
EcoT22I	ATGCAT	4 cut(s)	442, 595, 1664, 3933
EcoT38I	GRGCYC	1 cut(s)	333
ErhI	CCWWGG	2 cut(s)	1494, 2917
FalI	AAGNNNNNCTT	6 cut(s)	65, 97, 200, 232, 2283, 2315
FaqI	GGGAC	5 cut(s)	4, 801, 1029, 2723, 2969
FauNDI	CATATG	1 cut(s)	3270
FbaI	TGATCA	3 cut(s)	630, 921, 2275
FblI	GTMKAC	1 cut(s)	54
FriOI	GRGCYC	1 cut(s)	333
FspBI	CTAG	9 cut(s)	528, 794, 1391, 1700, 1778, 2013, 2727, 2865, 3626
GlaI	GCGC	3 cut(s)	522, 3630, 3780
GsaI	CCCAGC	1 cut(s)	1240
GsuI	CTGGAG	4 cut(s)	2507, 2556, 3149, 3842
HaeII	RGCGCY	2 cut(s)	524, 3632
HaeIII	GGCC	7 cut(s)	79, 119, 616, 1870, 2213, 2971, 4005
HapII	CCGG	1 cut(s)	819
HgaI	GACGC	3 cut(s)	6, 2445, 2588
HhaI	GCGC	3 cut(s)	523, 3631, 3781
Hin6I	GCGC	3 cut(s)	521, 3629, 3779
HinP1I	GCGC	3 cut(s)	521, 3629, 3779
HincII	GTYRAC	3 cut(s)	55, 1075, 2086
HindII	GTYRAC	3 cut(s)	55, 1075, 2086
HindIII	AAGCTT	2 cut(s)	2618, 2981
HpaII	CCGG	1 cut(s)	819
HphI	GGTGA	1 cut(s)	3739
Hpy99I	CGWCG	3 cut(s)	70, 191, 1452
HpyCH4III	ACNGT	8 cut(s)	1132, 1875, 1928, 2114, 2608, 2639, 3055, 3361
HpyCH4IV	ACGT	3 cut(s)	2845, 2871, 2878
HpySE526I	ACGT	3 cut(s)	2845, 2871, 2878
HspAI	GCGC	3 cut(s)	521, 3629, 3779
Ksp22I	TGATCA	3 cut(s)	630, 921, 2275
LmnI	GCTCC	9 cut(s)	336, 1289, 1806, 2575, 2662, 2765, 3265, 3593, 3841
MaeI	CTAG	9 cut(s)	528, 794, 1391, 1700, 1778, 2013, 2727, 2865, 3626
MaeII	ACGT	3 cut(s)	2845, 2871, 2878
MbiI	CCGCTC	2 cut(s)	193, 1580
MfeI	CAATTG	2 cut(s)	2555, 3459
MflI	RGATCY	2 cut(s)	3346, 3766
MhlI	GDGCHC	5 cut(s)	333, 418, 2826, 3053, 3181
MlsI	TGGCCA	2 cut(s)	1870, 4005
MluNI	TGGCCA	2 cut(s)	1870, 4005
MlyI	GAGTC	9 cut(s)	343, 887, 1522, 1927, 2081, 2951, 3308, 3500, 3812
MmeI	TCCRAC	3 cut(s)	1347, 2423, 3786
Mox20I	TGGCCA	2 cut(s)	1870, 4005
Mph1103I	ATGCAT	4 cut(s)	442, 595, 1664, 3933
MroXI	GAANNNNTTC	2 cut(s)	709, 2295
MscI	TGGCCA	2 cut(s)	1870, 4005
MslI	CAYNNNNRTG	1 cut(s)	1755
Msp20I	TGGCCA	2 cut(s)	1870, 4005
MspA1I	CMGCKG	1 cut(s)	884
MspI	CCGG	1 cut(s)	819
MspR9I	CCNGG	3 cut(s)	819, 2024, 3043
MunI	CAATTG	2 cut(s)	2555, 3459
Mva1269I	GAATGC	1 cut(s)	1738
MvaI	CCWGG	2 cut(s)	2024, 3043
NciI	CCSGG	1 cut(s)	819
NdeI	CATATG	1 cut(s)	3270
NheI	GCTAGC	1 cut(s)	793
NlaIV	GGNNCC	4 cut(s)	197, 2571, 2911, 2970
NmuCI	GTSAC	8 cut(s)	212, 339, 557, 1194, 1386, 2867, 2879, 3307
NsiI	ATGCAT	4 cut(s)	442, 595, 1664, 3933
NspI	RCATGY	5 cut(s)	1707, 1899, 2525, 3578, 3935
PacI	TTAATTAA	1 cut(s)	465
PaeI	GCATGC	3 cut(s)	1899, 3578, 3935
PaeR7I	CTCGAG	1 cut(s)	353
PagI	TCATGA	1 cut(s)	3960
PctI	GAATGC	1 cut(s)	1738
PdmI	GAANNNNTTC	2 cut(s)	709, 2295
PfeI	GAWTC	8 cut(s)	379, 705, 1044, 1064, 1094, 1403, 1882, 2296
PflFI	GACNNNGTC	1 cut(s)	2439
PflMI	CCANNNNNTGG	3 cut(s)	2542, 3009, 3865
PfoI	TCCNGGA	1 cut(s)	817
PleI	GAGTC	9 cut(s)	343, 886, 1521, 1926, 2081, 2951, 3307, 3499, 3811
PpsI	GAGTC	9 cut(s)	343, 886, 1521, 1926, 2081, 2951, 3307, 3499, 3811
Ppu21I	YACGTR	1 cut(s)	2879
PpuMI	RGGWCCY	1 cut(s)	1171
PshBI	ATTAAT	4 cut(s)	461, 845, 2127, 3153
Psp124BI	GAGCTC	1 cut(s)	333
Psp5II	RGGWCCY	1 cut(s)	1171
Psp6I	CCWGG	2 cut(s)	2022, 3041
PspFI	CCCAGC	1 cut(s)	1236
PspGI	CCWGG	2 cut(s)	2022, 3041
PspN4I	GGNNCC	4 cut(s)	197, 2571, 2911, 2970
PspPI	GGNCC	7 cut(s)	78, 1171, 2158, 2249, 2533, 2969, 3019
PspPPI	RGGWCCY	1 cut(s)	1171
PstI	CTGCAG	1 cut(s)	3411
PstNI	CAGNNNCTG	3 cut(s)	1439, 3076, 3865
PsuI	RGATCY	2 cut(s)	3346, 3766
PsyI	GACNNNGTC	1 cut(s)	2439
PvuII	CAGCTG	1 cut(s)	884
RseI	CAYNNNNRTG	1 cut(s)	1755
SacI	GAGCTC	1 cut(s)	333
SalI	GTCGAC	1 cut(s)	53
Sau96I	GGNCC	7 cut(s)	78, 1171, 2158, 2249, 2533, 2969, 3019
ScaI	AGTACT	3 cut(s)	302, 359, 1638
SchI	GAGTC	9 cut(s)	343, 887, 1522, 1927, 2081, 2951, 3308, 3500, 3812
ScrFI	CCNGG	3 cut(s)	819, 2024, 3043
SduI	GDGCHC	5 cut(s)	333, 418, 2826, 3053, 3181
SfcI	CTRYAG	3 cut(s)	1078, 3357, 3407
Sfr274I	CTCGAG	1 cut(s)	353
SinI	GGWCC	5 cut(s)	1171, 2158, 2249, 2533, 3019
SlaI	CTCGAG	1 cut(s)	353
SmiMI	CAYNNNNRTG	1 cut(s)	1755
SmlI	CTYRAG	6 cut(s)	167, 304, 344, 353, 731, 3782
SmoI	CTYRAG	6 cut(s)	167, 304, 344, 353, 731, 3782
SphI	GCATGC	3 cut(s)	1899, 3578, 3935
SsiI	CCGC	5 cut(s)	76, 120, 193, 1580, 3742
SspI	AATATT	2 cut(s)	2260, 3650
SspMI	CTAG	9 cut(s)	528, 794, 1391, 1700, 1778, 2013, 2727, 2865, 3626
SstI	GAGCTC	1 cut(s)	333
StyD4I	CCNGG	3 cut(s)	817, 2022, 3041
StyI	CCWWGG	2 cut(s)	1494, 2917
TaaI	ACNGT	8 cut(s)	1132, 1875, 1928, 2114, 2608, 2639, 3055, 3361
TaiI	ACGT	3 cut(s)	2848, 2874, 2881
TatI	WGTACW	6 cut(s)	300, 357, 387, 727, 1636, 3424
TauI	GCSGC	3 cut(s)	79, 122, 1583
TfiI	GAWTC	8 cut(s)	379, 705, 1044, 1064, 1094, 1403, 1882, 2296
TscAI	CASTG	9 cut(s)	1878, 1931, 2013, 2505, 2644, 2826, 3081, 3132, 3228
TseFI	GTSAC	8 cut(s)	212, 339, 557, 1194, 1386, 2867, 2879, 3307
Tsp45I	GTSAC	8 cut(s)	212, 339, 557, 1194, 1386, 2867, 2879, 3307
TspGWI	ACGGA	5 cut(s)	758, 1042, 2841, 2898, 3518
TspRI	CASTG	9 cut(s)	1878, 1931, 2013, 2505, 2644, 2826, 3081, 3132, 3228
Tth111I	GACNNNGTC	1 cut(s)	2439
Van91I	CCANNNNNTGG	3 cut(s)	2542, 3009, 3865
VneI	GTGCAC	1 cut(s)	2822
VpaK11BI	GGWCC	5 cut(s)	1171, 2158, 2249, 2533, 3019
VspI	ATTAAT	4 cut(s)	461, 845, 2127, 3153
XceI	RCATGY	5 cut(s)	1707, 1899, 2525, 3578, 3935
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2636
XhoI	CTCGAG	1 cut(s)	353
XmiI	GTMKAC	1 cut(s)	54
XmnI	GAANNNNTTC	2 cut(s)	709, 2295
XspI	CTAG	9 cut(s)	528, 794, 1391, 1700, 1778, 2013, 2727, 2865, 3626
ZrmI	AGTACT	3 cut(s)	302, 359, 1638
Zsp2I	ATGCAT	4 cut(s)	442, 595, 1664, 3933

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.