Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0002105

Physical Location & Seq

Genomic Coordinates Forward (+)

20259508 .. 20273037

Gene Structure 13530 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g26990.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6363 bp

ATGGCGACCTCGATTGCGTCCCAATTAAAAGTCCTGGTATCGCGGATACCAGTCGACCAGGACCCTTCCCAGAAGAGGCCCTTCACTCGTCCTTCGATCCTCTTCGACCCCAAAGAGGCCGCCGATATCGATATCGACACGATTTTCGCAATCGGAGTCCAAGGTCTGGAGCTTCTTGTTAGTACCGACGAGCGGTTCCGGAATTTTAAGAATGATCTGTTCAGCTACCAGAGTAAGGAGTTGGACAGGGAGTTGATGGGGAAAGAGGAGAACAAAAGCATTGATGTTTCGATTAGTAAGTTCTTGAGATTGCTGTCTGGGCATTTCGAGCTCCCATCGTCACTCAAGACTCTCGAGTACTTGATTCGGAGATATAAGATTCATGTGTACAACATTGAGGAATTGGTTTTGTGTGCCCTGCCGTACCATGAGACGCACGCTTTTGTTAAAATTGTTCAACTAATTAACTTCGGAAATAGTAAGTGGAAATTTCTAGAGGGCGTGAAACGATCTGGCGCAGCTCCACCGAGAAATGTTATAGTGCAGCAATGTATTCGTGACATGGGGGTTTTGGAGGCTTTATTCGACTATGCATCCCCGTCAAAGAAGTATCGGCCTTCAAAGCCAGTGATCAGATTTTGCACGGCAGTTGTCATTGAGGTTTTGGGTTCCGTTGCATCTGTTGAAAGTCATGTTGTGAAAAGAATCTATGCACTTATTCATTCTGTACTGGAGGTCGGCACGGATGGACATTCAGAAAACAAGGCTGGTGCTATGATGATTGTTGGTATGCTAGCAAGTAAAGTTACAATATCTCCTGGACTTGTCAAGGGGTTAATTTTATTAATTGCTAAAGTTGCTGAGGAGGATGCGAAAGAGTCGGCTGATCTTCAGCTTTTTCGCTTATCACTTATGACTTTGATCAACCTTGTTCAGTTGCAAGTCGTGGATAACTTCCCCATGAAAGCTCTGGAGAGTTTGATCGGCATTAGGGATTTTGCTGACATTCTTCTGGGGCTTTTCAACAAGTTCAAAATTGATAGATTTCTTTCTGTGCTTTTGGATTCTCTTGTTGACTATAGTTCGTCTAATGAATCCTGCCAGCTTGCGTTGATCTCCATATTGGATACAGTTCCTTCCAAGAATTTTGTTCATCATATAGTTCCAAAGGTCCTATCTTCCTGCTTGCAAAGGTCTAAGGACTTAGAAAATTCAATATTATTTTCATCAGGAAGCTGGGCAGAGAAAGTTTTATTTGTTCTTAGAAAATATCCATCTGAACTGCATGGAGCAGCTGACAAATTTTTGGAAAAAAACGTTCAATCTAAGAAACGCGGTTCGGTACATGAAGCTCTGCGTAAAATGTTGGATGGGAACTTGGATAGATCACTAGCTTGCTCAGAATCAAACATTTGGTTCAGGTTGCATCATCCAGAGGCTGATGTTCGTCGCCGTACACTTTCTGAAATGAAGACTTCAGGTCTTCTGGAAGCCAAGGGAACAAATTCGCAGAGTCTTGTAATCATCCAAGATGGCATATTGCGACAGCTTCAGGATAATGATCTTACGGTTGTCAGAGCAGCTTTGTCGTTAGACAAATTGTCCACTTTATTGAACCCATCTGATCTTACTGAAGTATTGGATAATCTGCTTAGAAGATGCATTGGTCTTTTGACAAGTTCGCTGGAGAACAACAGCCTAGCATGTGATGTTGCTATTTTGTGCCTGAAGAATGCTGTTGCTGTCATCCATCAGAATGTTGAATGTTGCAATAAACTAGCTGCTATGATATTTCCTTTGCTCCTTGTTTTACCGAAGACACAGAGGTTAAATTTGAAAGCATTGGAATTAGCCAAGGCAGAGAAATGGCCACTGTTTGAGAATCTTGCTGCTGCATGCAATACAGAACATTCATTACAACCAGGAAGCTTATCCTCCATCAACATGGCCACCATTACTAGTTTGGCGAGCAGATTTTTGTTGCACCCTGAAAAATCCATGCCTTGGCTTGTTCAGAGTTCTAATGAATTTGAGTTGTCAAAGACGCTCTTCTTTCTGGTGATGATGCAGACAGTTCTGATTGAAAAGGAATCTGTTGAATCTTTGGAACTTTTTGAAGTTCTGTTTCCAGCATTGAAGTCAGAATGGGAATCGTTTGAATCTACAGGTCTTAACTCTATAGCAGAGTTCAAAACCGAGATGCTGAATTGGGATTGCAGCAGATTTCTTGATAACATAGATTCCAATTTGATGGCATTAAATACAAATATTCTAATTTGCATCTTTTGGAGGTTGATGGAGGCATTTCTATCTGCGATGCCTGCAGATGTCCCATTGGATGGTGATGGGAAGTGGGTTAGCTGGCTAAGGGAATTGTTCACCTTCTTCTCAGGCTGTCAGTTTAAGAACATTTTTAAGGAACACCGTCATTACCTTGTCACAAAGTCCAAGATCTCTGCTGTTTCTTTCCTTGCCAAGTTTTTCACAGAAGAAGCCGTTCCTATTACAGTCCAGATTGAGAGTCTTCACTGTTTTTCCTACCTCTGCCTTCAGTCAGAAGTCAGAATGGCAGTTCAATTTCTTGCAGAGTTTCCATCTCTTCTTGTTCCACTGGCTAGTAGTAACCAGGAAGTAAGAAATGTTGCCATGAATTGTATTGAAGGTTTACACACATTTTCATCTCATGTTGACTCGTTGAGCAAGAAAAATGGAAACCGTGCAGTTCGGATTAATCATCTTGATAAGCTGCTGGACCTGGTGGTCCAGCAGAAAAGGCTAATCCTGTCAGATAGAAACTTGCTTCCTTCTCTCTTGGCCTCTTTGCTGAGCCCGTCCTTCGAGAGCTTCTTAGGGCCAAAGAATATTGAGATAAGGTTTGATCAATCTACAAGAGATGAGATTCTTACTTTCATGTTGAATTCTGCCATGAAACTGCCTGAATATGCAAAGCTTGCTATTCTTTCTTTGGTTAGAGGAACTGGCAATGCCATTATACATCATAAAGAAGTGAAGTCATATTTGTCTCATCTCTTGGGAAGACGCAGTCGTGACATGAACATTTCAAGTCAATGTTTGTCAAAAATTGAACTTCAGATATTATGCCTCCTACTGGAGTGCTGTGCCGTGCCATCTTCAACAGACGGGCATGTATTTGAGGACCAATTATTGGAGGCTTTGCAATTGGATGGTTTGGCTCCAGAAGAAGCTTCCACTGTACAGCCTTGTATTACTGTCTTGCAAAAGCTTAACAGCCAAATCTACAGTGGACTGAAGACAGAAGTGCAGGAGCTTTTGTTCCGTAAACTGGTAACTGCATTTCACAATCCAAATGGGGACATACAAAATGCAACTAGAGCAGCCTTGCAGCGTTTACATATTACTTGCTCCACTATCGTCCACACTCTTGATCACGTAGTCAAAAATGGCAGTTGTGCAATTCGTTCAGTGCAGAGAACAAAGAAAATGAAAAGTCAGAAGTCCACTCCGTCTAATGATGTGATATGTGAAAGAGAAAATGCACTCTCTTTACTTGGTTCCCTCCTTGGTATTATATTATTCAAGAAAGACATAGAGAAGAGGAACTCTCTTTTGGGCCCATTGTTTAAGCTTCTCTTCAAAACTTTTTCCAAAGAGTGGGTAGAAGATCAGTTCAACACTTCTGAAGCTACATCAAGCACAGTAAATTACATACAACAGACACTGCTAATAATCTTAGAAGATATCAGTTCTTCACTTATAAGTTCTATACCAGTGGAGGACAACATAGTAAATGAGATTAATGTCAAACTTTTGGTTGAGTGTGCCCATTCTGCAAAGGATGGAGTTACTCGCAACCATGTGTTTTCACTGATTTCCTCTATCACAAAGATCGTTCCAGAAAAGGTTTTGGAGCATATGCTGGATATATTTGCTGTTATTGGAGAGTCAGCAGTCACACAGATTGATAGCCATTCACAACGTGTGTTTGAGGATCTTTTATCTACAGTTGTTCCTTGTTGGCTTTCTGGGACAGGTAGCAATGACAAACTGCTCGAGATTTTTGTCAATGTACTGCCCGAAGTTGCCGAGTATAGAAGGCTATCAATTGTTGTGTACCTACTGAGGACTATGGGAGAGTCAAATAGCTTGGCGTCGTTACTTGTTCTTCTTTTCCGTTCAATAATTTCAAGAAAAGGGATATCTTGCTTTGATAATGTGCATGCTTCAGATACCTCTTTACAGAGAGAGTGGGAGTATGCCCTGGGGCTTCAAATATGTGAGCAATATTCATGTATGATATGGCTTCCCCCTCTTGTTGTGCTACTTAAACAAATAAGAATGGGTGAAGAGGTATTTAGAGAATTGTTGATTGCAATGAGGTTCATCTTGCATAAGCTGCAAGATCCAGAGTTTGCGCTCAAGATGGCATCCGGGGAAGACTCGGACAAAATTCAGGCTACATTGGGAGAACTCATGGAGCAGGTTGTCTCTCTCCAGCAACTTGTAGATGCGAGAAGAAAGGACAAAAGTATCAGTGTTGTGAGGAAAGATTTGAAGGAGTGTATGCATTCTGTAGTGTGGACTATTACTGGGGTCATGAACCCTTCGACACTCTTCAATGGCATAACTAAATTGCTTGGCGACAGAGATAGGAACGTGGAAAAGAAGGCACTTGGACTCCTATGTGAAACCATTAGGAATCTTGACACAGTCAAAGCAAAGCTTAAGTTTAATAAAGGCTCTAGTCTCCGTTGGAATCATCTTGATGAGATTTCTCTCAGCTCGTTACGAGTTACATGTCTGAAAATTGTTCAGCTAATTGATGATTCTTCTGATGATATGGAAGTCTCCTTGAAAGTGGCAGCAGCGTTGGCTCTAGATGTTTTAGCCCAAAGGTTCCCTTCTTACTCTTCCATCTTCAGTGAGTGTCTACCATCTGTTACAAAAAGTATCAGTATGCACGATTTGGCAGTGTCATCTAGCTGCCTTCAAACAACTGGTGCTTTGATCAATGTGCTTGGACCCAAGGCACTCTCTGAGCTTCCTCACATAATGGAAAGTTTGATCAAGATTTCTCATGAAGTCCTTGTATCCTCGCATACAAAAGCCATATCCAGCGGTGGTAGCCGGCCTGTGTTGCTAAAACCCCAGGAATCTCTAGTTTTGTCTATTCTTGTTACTTTGGAGGCTGTTGTGGTTAAGCTAGGGCAGTTCTTAAGCCCGTACCTTGAAGATATTACAAGAGTTATGGTGATCGATCTTGATTATGCATTAGGGTCTGATCAGAAGCTAAAAATGCGGGCTGAGTCGGTACGAAAACTCATCACCGAGAACATCACGGTTCGACTTGCTCTACCTCCCTTGTTAAACATCTACTCTAGCACAGTTGAGTCTGGGGATTCCAGTTTAATAATTTATTTTGGAATGCTGGCCAACATGATTGGAAGAATGGATAGGTCATCTGTTGGTAGTTACCATGCTAAGATTTTTGAACGGTGCTTGATTGCTCTTGATCTACGTCGTCAACATCCGGCTTCTGTTCGAAGAATTGATGATGTAGAGAATAGTGTTTTCACTGCAATGATTTCTCTCTCTATGAAGCTCACTGAGACAATGTTTAGACCTCTTTTCATTAGGAGTATTGATTGGGCAAACTCAGAAGTGGAAGATATTTCATGTGCGGGATATATACCTAGGGCTATCTCTTTCTACGGCCTCGTAAACAAACTTGCGGAAAACCACAGGTCCCTTTTTGTTCCTTATTTCAAATACTTGCTGGAGAATTGTGTACGGTATCTTACTGTTGCTGGAGATGCAATGCCTTCTGGTTCAACACGAAAGAAGAAGGCCAAGATTCAGGAATCTGATAACAGCATGTTCCTTGGAAACTGGCATCTTAGAGCGTTGGTCTTATCGTCATTACATAAATGTTTTCTCTATGATACTGGAAGCCTGAAGTTTCTTGATTCTTCCAATTTTCAGGTTCTACTGAAGCCAATTGTTTTCCAGCTTGTCATAGAACCTCCACAGTCTCTAGAGGAGCATTCTGATATTCCATCTGTACAGGAAGTTGATGAATTATTGGTTGTTTGTATTGGTCAAATGGCTGTGACCGCAGGAAGTGATCTTTTATGGAAGCCCTTGAATCATGAGGTGCTGATGCAGACACGCAGTGATAAGGTCCGTGCAAGAATTTTGGGCCTGAGAGTTGTTAAATATCTTGTGGAGCATCTAAGAGAAGAATATCTGGTATTTGTTCCCGAAACGGTTCCCTTCTTTGCTGAGTTGCTCGAGGATGTCGAGCCTTCTGTTAAATCCTTGGCACAAGAAATCTTCAATGAATTGAGCACCATGACTGGTGAAAACCTCTCAGAGTATATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006355 GO:0006356 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034455 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

BP28CT U3snoRNP10

Protein Analysis

2121

Amino Acids

237.71

Weight (kDa)

6.38

Isoelectric Point (pI)

46.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U3snoRNP10	PF12397	47 - 170	1.6e-15	U3 small nucleolar RNA-associated protein 10
ARM_At3g06530	PF24477	441 - 633	5.6e-76	At3g06530-like, ARM repeats
HEAT_HEATR1	PF23243	1152 - 1337	8.2e-62	HEATR1-like, HEAT repeats
BP28CT	PF08146	1629 - 1791	3.3e-38	BP28CT (NUC211) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06530 AT3G06530 AT3G06530 AT3G06530 AT3G06530
fragaria_vesca	FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990
malus_domestica	MD07G1249300.v1.1
prunus_persica	Prupe.2G273000_v2.0.a1 Prupe.2G273000_v2.0.a1 Prupe.2G273000_v2.0.a1
pyrus_communis	pycom01g18810 pycom01g18840 pycom05g24490 pycom07g22250 pycom07g22260
rosa_chinensis	RchiOBHm_Chr1g0373711 RchiOBHm_Chr1g0373721 RchiOBHm_Chr5g0059891 RchiOBHm_Chr7g0224071
rosa_laevigata	RLG00000026806
rosa_multiflora	Rmu_co8395535.1_g000001 Rmu_sc0002606.1_g000003 Rmu_sc0002606.1_g000005 Rmu_sc0010519.1_g000004 Rmu_sc0023430.1_g000002
rosa_roxburghii	Rroxscaffold_4G00284050 Rroxscaffold_5G00353230
rosa_rugosa	Rorug01G0379200
rosa_samantha	Rh1AG388500 Rh1BG352900 Rh1CG365800 Rh1DG383300 Rh3AG266200 Rh3DG308600
rosa_wichuraiana	Rw1G034670 Rw3G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3737
AasI	GACNNNNNNGTC	1 cut(s)	2759
Acc36I	ACCTGC	1 cut(s)	4450
AccB7I	CCANNNNNTGG	5 cut(s)	166, 2004, 2339, 3166, 3633
AccBSI	CCGCTC	1 cut(s)	193
AccI	GTMKAC	2 cut(s)	54, 4909
AccII	CGCG	2 cut(s)	43, 1335
AccIII	TCCGGA	1 cut(s)	198
AciI	CCGC	9 cut(s)	43, 120, 193, 1335, 5097, 5278, 5660, 5711, 6093
AclI	AACGTT	1 cut(s)	1317
AclWI	GGATC	3 cut(s)	91, 3978, 4376
AcoI	YGGCCR	3 cut(s)	1868, 1947, 5409
AcyI	GRCGYC	1 cut(s)	4130
AdeI	CACNNNGTG	2 cut(s)	3959, 6152
AflII	CTTAAG	2 cut(s)	4703, 5194
AflIII	ACRYGT	2 cut(s)	3958, 4775
AhdI	GACNNNNNGTC	2 cut(s)	1479, 1600
AhlI	ACTAGT	1 cut(s)	1958
AjnI	CCWGG	8 cut(s)	33, 57, 817, 1921, 2625, 2754, 4239, 5127
AjuI	GAANNNNNNNTTGG	2 cut(s)	3572, 3604
AloI	GAACNNNNNNTCC	2 cut(s)	3278, 3310
Alw21I	GWGCWC	2 cut(s)	333, 6329
Alw26I	GTCTC	7 cut(s)	425, 3027, 4471, 4730, 4831, 5582, 6015
AlwI	GGATC	3 cut(s)	91, 3978, 4376
AlwNI	CAGNNNCTG	2 cut(s)	1439, 3700
Ama87I	CYCGRG	3 cut(s)	353, 4031, 6269
Aor13HI	TCCGGA	1 cut(s)	198
ApaI	GGGCCC	1 cut(s)	3596
ArsI	GACNNNNNNTTYG	2 cut(s)	128, 160
AseI	ATTAAT	3 cut(s)	845, 2730, 3777
Asp700I	GAANNNNTTC	3 cut(s)	1504, 2496, 6246
AspA2I	CCTAGG	1 cut(s)	5672
AspLEI	GCGC	2 cut(s)	518, 4396
AsuC2I	CCSGG	1 cut(s)	4411
AsuHPI	GGTGA	7 cut(s)	2071, 2354, 2371, 4334, 5242, 5296, 6350
AsuII	TTCGAA	1 cut(s)	5521
AsuNHI	GCTAGC	1 cut(s)	793
AvaI	CYCGRG	3 cut(s)	353, 4031, 6269
AvaII	GGWCC	8 cut(s)	61, 1171, 2752, 2761, 3157, 5000, 5724, 6160
AvrII	CCTAGG	1 cut(s)	5672
BaeGI	GKGCMC	3 cut(s)	418, 3596, 3805
BaeI	ACNNNNGTAYC	2 cut(s)	4492, 4525
BalI	TGGCCA	3 cut(s)	1870, 1949, 5411
BanII	GRGCYC	3 cut(s)	333, 2831, 3596
BbsI	GAAGAC	7 cut(s)	1475, 1478, 1823, 2516, 3043, 3278, 4422
Bbv12I	GWGCWC	2 cut(s)	333, 6329
BbvCI	CCTCAGC	1 cut(s)	861
BceAI	ACGGC	6 cut(s)	406, 660, 1437, 2480, 3107, 5707
BcgI	CGANNNNNNTGC	4 cut(s)	536, 570, 1569, 1603
BciT130I	CCWGG	8 cut(s)	35, 59, 819, 1923, 2627, 2756, 4241, 5129
BciVI	GTATCC	3 cut(s)	39, 1120, 5080
BclI	TGATCA	7 cut(s)	630, 921, 2878, 3406, 4986, 5043, 5260
BcnI	CCSGG	1 cut(s)	4411
BcoDI	GTCTC	7 cut(s)	425, 3027, 4471, 4730, 4831, 5582, 6015
BcuI	ACTAGT	1 cut(s)	1958
BfmI	CTRYAG	7 cut(s)	1078, 2163, 2178, 2322, 3259, 3981, 4551
BfrI	CTTAAG	2 cut(s)	4703, 5194
BfuAI	ACCTGC	1 cut(s)	4450
BfuI	GTATCC	3 cut(s)	39, 1120, 5080
BglII	AGATCT	1 cut(s)	2451
BlnI	CCTAGG	1 cut(s)	5672
BlpI	GCTNAGC	1 cut(s)	2825
BmcAI	AGTACT	1 cut(s)	359
Bme1390I	CCNGG	9 cut(s)	35, 59, 819, 1923, 2627, 2756, 4241, 4411, 5129
Bme18I	GGWCC	8 cut(s)	61, 1171, 2752, 2761, 3157, 5000, 5724, 6160
BmeRI	GACNNNNNGTC	2 cut(s)	1479, 1600
BmeT110I	CYCGRG	3 cut(s)	353, 4031, 6269
BmrFI	CCNGG	9 cut(s)	35, 59, 819, 1923, 2627, 2756, 4241, 4411, 5129
BmrI	ACTGGG	1 cut(s)	4578
BmtI	GCTAGC	1 cut(s)	797
BmuI	ACTGGG	1 cut(s)	4578
BpiI	GAAGAC	7 cut(s)	1475, 1478, 1823, 2516, 3043, 3278, 4422
BplI	GAGNNNNNCTC	2 cut(s)	3568, 3600
BpmI	CTGGAG	9 cut(s)	188, 752, 992, 1706, 3131, 3180, 4457, 5777, 5808
Bpu10I	CCTNAGC	2 cut(s)	861, 2366
Bpu1102I	GCTNAGC	1 cut(s)	2825
Bpu14I	TTCGAA	1 cut(s)	5521
BpuEI	CTTGAG	3 cut(s)	325, 329, 4382
BpuMI	CCSGG	1 cut(s)	4411
Bsa29I	ATCGAT	2 cut(s)	129, 5235
BsaAI	YACGTR	1 cut(s)	3412
BsaBI	GATNNNNATC	1 cut(s)	1560
BsaHI	GRCGYC	1 cut(s)	4130
BsaWI	WCCGGW	1 cut(s)	198
BsaXI	ACNNNNNCTCC	6 cut(s)	799, 829, 3278, 3308, 4641, 4671
Bse118I	RCCGGY	1 cut(s)	5106
Bse3DI	GCAATG	6 cut(s)	554, 2989, 4024, 4359, 5565, 5802
Bse8I	GATNNNNATC	1 cut(s)	1560
BseAI	TCCGGA	1 cut(s)	198
BseBI	CCWGG	8 cut(s)	35, 59, 819, 1923, 2627, 2756, 4241, 5129
BseCI	ATCGAT	2 cut(s)	129, 5235
BseJI	GATNNNNATC	1 cut(s)	1560
BseMI	GCAATG	6 cut(s)	554, 2989, 4024, 4359, 5565, 5802
BseRI	GAGGAG	3 cut(s)	281, 878, 6032
BseSI	GKGCMC	3 cut(s)	418, 3596, 3805
BseYI	CCCAGC	1 cut(s)	1236
BsgI	GTGCAG	4 cut(s)	563, 2739, 3302, 3467
Bsh1236I	CGCG	2 cut(s)	43, 1335
BshVI	ATCGAT	2 cut(s)	129, 5235
BsiHKAI	GWGCWC	2 cut(s)	333, 6329
BsiHKCI	CYCGRG	3 cut(s)	353, 4031, 6269
BsiSI	CCGG	4 cut(s)	199, 4410, 5107, 5510
BslFI	GGGAC	5 cut(s)	4, 2315, 3347, 4021, 5710
BsmAI	GTCTC	7 cut(s)	425, 3027, 4471, 4730, 4831, 5582, 6015
BsmBI	CGTCTC	1 cut(s)	425
BsmFI	GGGAC	5 cut(s)	4, 2315, 3347, 4021, 5710
BsmI	GAATGC	4 cut(s)	1738, 4546, 5409, 6022
BsoBI	CYCGRG	3 cut(s)	353, 4031, 6269
Bsp119I	TTCGAA	1 cut(s)	5521
Bsp120I	GGGCCC	1 cut(s)	3592
Bsp1286I	GDGCHC	6 cut(s)	333, 418, 2831, 3596, 3805, 6329
Bsp13I	TCCGGA	1 cut(s)	198
Bsp1407I	TGTACA	3 cut(s)	387, 3214, 6040
Bsp1720I	GCTNAGC	1 cut(s)	2825
BspACI	CCGC	9 cut(s)	43, 120, 193, 1335, 5097, 5278, 5660, 5711, 6093
BspDI	ATCGAT	2 cut(s)	129, 5235
BspEI	TCCGGA	1 cut(s)	198
BspFNI	CGCG	2 cut(s)	43, 1335
BspHI	TCATGA	3 cut(s)	4575, 5056, 6127
BspMAI	CTGCAG	1 cut(s)	2326
BspMI	ACCTGC	1 cut(s)	4450
BspOI	GCTAGC	1 cut(s)	797
BspPI	GGATC	3 cut(s)	91, 3978, 4376
BspQI	GCTCTTC	1 cut(s)	2054
BspT104I	TTCGAA	1 cut(s)	5521
BspTI	CTTAAG	2 cut(s)	4703, 5194
BsrBI	CCGCTC	1 cut(s)	193
BsrDI	GCAATG	6 cut(s)	554, 2989, 4024, 4359, 5565, 5802
BsrFI	RCCGGY	1 cut(s)	5106
BsrGI	TGTACA	3 cut(s)	387, 3214, 6040
BssAI	RCCGGY	1 cut(s)	5106
BssNI	GRCGYC	1 cut(s)	4130
BssT1I	CCWWGG	9 cut(s)	160, 1494, 1854, 2003, 3541, 5004, 5672, 5860, 6297
Bst2UI	CCWGG	8 cut(s)	35, 59, 819, 1923, 2627, 2756, 4241, 5129
Bst6I	CTCTTC	9 cut(s)	68, 107, 2054, 2604, 3569, 3617, 4320, 4598, 4894
BstACI	GRCGYC	1 cut(s)	4130
BstAFI	CTTAAG	2 cut(s)	4703, 5194
BstAPI	GCANNNNNTGC	2 cut(s)	2951, 4375
BstAUI	TGTACA	3 cut(s)	387, 3214, 6040
BstBAI	YACGTR	1 cut(s)	3412
BstBI	TTCGAA	1 cut(s)	5521
BstFNI	CGCG	2 cut(s)	43, 1335
BstHHI	GCGC	2 cut(s)	518, 4396
BstMAI	GTCTC	7 cut(s)	425, 3027, 4471, 4730, 4831, 5582, 6015
BstNI	CCWGG	8 cut(s)	35, 59, 819, 1923, 2627, 2756, 4241, 5129
BstNSI	RCATGY	6 cut(s)	1707, 1899, 3149, 4202, 4779, 5857
BstSCI	CCNGG	9 cut(s)	33, 57, 817, 1921, 2625, 2754, 4239, 4409, 5127
BstSFI	CTRYAG	7 cut(s)	1078, 2163, 2178, 2322, 3259, 3981, 4551
BstSLI	GKGCMC	3 cut(s)	418, 3596, 3805
BstUI	CGCG	2 cut(s)	43, 1335
BstV2I	GAAGAC	7 cut(s)	1475, 1478, 1823, 2516, 3043, 3278, 4422
BstX2I	RGATCY	3 cut(s)	2451, 3970, 4381
BstXI	CCANNNNNNTGG	2 cut(s)	1945, 2251
BstYI	RGATCY	3 cut(s)	2451, 3970, 4381
Bsu15I	ATCGAT	2 cut(s)	129, 5235
BsuI	GTATCC	3 cut(s)	39, 1120, 5080
BsuTUI	ATCGAT	2 cut(s)	129, 5235
BtgZI	GCGATG	1 cut(s)	2330
BtsI	GCAGTG	4 cut(s)	3698, 4956, 5553, 6157
BveI	ACCTGC	1 cut(s)	4450
CaiI	CAGNNNCTG	2 cut(s)	1439, 3700
CciI	TCATGA	3 cut(s)	4575, 5056, 6127
CfoI	GCGC	2 cut(s)	518, 4396
Cfr10I	RCCGGY	1 cut(s)	5106
ClaI	ATCGAT	2 cut(s)	129, 5235
CseI	GACGC	5 cut(s)	6, 442, 2053, 3048, 4119
CsiI	ACCWGGT	1 cut(s)	2754
DraIII	CACNNNGTG	2 cut(s)	3959, 6152
DrdI	GACNNNNNNGTC	1 cut(s)	2759
DriI	GACNNNNNGTC	2 cut(s)	1479, 1600
DseDI	GACNNNNNNGTC	1 cut(s)	2759
EaeI	YGGCCR	3 cut(s)	1868, 1947, 5409
Eam1104I	CTCTTC	9 cut(s)	68, 107, 2054, 2604, 3569, 3617, 4320, 4598, 4894
Eam1105I	GACNNNNNGTC	2 cut(s)	1479, 1600
EarI	CTCTTC	9 cut(s)	68, 107, 2054, 2604, 3569, 3617, 4320, 4598, 4894
Ecl136II	GAGCTC	1 cut(s)	331
Eco130I	CCWWGG	9 cut(s)	160, 1494, 1854, 2003, 3541, 5004, 5672, 5860, 6297
Eco24I	GRGCYC	3 cut(s)	333, 2831, 3596
Eco32I	GATATC	4 cut(s)	127, 133, 3721, 4179
Eco47I	GGWCC	8 cut(s)	61, 1171, 2752, 2761, 3157, 5000, 5724, 6160
Eco53kI	GAGCTC	1 cut(s)	331
Eco88I	CYCGRG	3 cut(s)	353, 4031, 6269
EcoICRI	GAGCTC	1 cut(s)	331
EcoO109I	RGGNCCY	4 cut(s)	61, 78, 1171, 5724
EcoRI	GAATTC	1 cut(s)	2917
EcoRII	CCWGG	8 cut(s)	33, 57, 817, 1921, 2625, 2754, 4239, 5127
EcoRV	GATATC	4 cut(s)	127, 133, 3721, 4179
EcoT14I	CCWWGG	9 cut(s)	160, 1494, 1854, 2003, 3541, 5004, 5672, 5860, 6297
EcoT22I	ATGCAT	4 cut(s)	595, 1664, 4548, 5251
EcoT38I	GRGCYC	3 cut(s)	333, 2831, 3596
ErhI	CCWWGG	9 cut(s)	160, 1494, 1854, 2003, 3541, 5004, 5672, 5860, 6297
Esp3I	CGTCTC	1 cut(s)	425
FaqI	GGGAC	5 cut(s)	4, 2315, 3347, 4021, 5710
FauI	CCCGC	2 cut(s)	5271, 5653
FauNDI	CATATG	1 cut(s)	3894
FbaI	TGATCA	7 cut(s)	630, 921, 2878, 3406, 4986, 5043, 5260
FblI	GTMKAC	2 cut(s)	54, 4909
FriOI	GRGCYC	3 cut(s)	333, 2831, 3596
GlaI	GCGC	2 cut(s)	517, 4395
GsaI	CCCAGC	1 cut(s)	1240
GsuI	CTGGAG	9 cut(s)	188, 752, 992, 1706, 3131, 3180, 4457, 5777, 5808
HapII	CCGG	4 cut(s)	199, 4410, 5107, 5510
HgaI	GACGC	5 cut(s)	6, 442, 2053, 3048, 4119
HhaI	GCGC	2 cut(s)	518, 4396
Hin1I	GRCGYC	1 cut(s)	4130
Hin6I	GCGC	2 cut(s)	516, 4394
HinP1I	GCGC	2 cut(s)	516, 4394
HincII	GTYRAC	4 cut(s)	55, 1075, 2689, 5504
HindII	GTYRAC	4 cut(s)	55, 1075, 2689, 5504
HindIII	AAGCTT	6 cut(s)	1927, 2948, 3204, 3242, 3605, 4700
HpaII	CCGG	4 cut(s)	199, 4410, 5107, 5510
HphI	GGTGA	7 cut(s)	2071, 2354, 2371, 4334, 5242, 5296, 6350
Hpy99I	CGWCG	4 cut(s)	191, 1452, 4135, 5502
HpyCH4IV	ACGT	5 cut(s)	1317, 3411, 3958, 4635, 5497
HpySE526I	ACGT	5 cut(s)	1317, 3411, 3958, 4635, 5497
Hsp92I	GRCGYC	1 cut(s)	4130
HspAI	GCGC	2 cut(s)	516, 4394
Kpn2I	TCCGGA	1 cut(s)	198
KroI	GCCGGC	1 cut(s)	5106
KroNI	GCCGGC	1 cut(s)	5108
Ksp22I	TGATCA	7 cut(s)	630, 921, 2878, 3406, 4986, 5043, 5260
LguI	GCTCTTC	1 cut(s)	2054
MabI	ACCWGGT	1 cut(s)	2754
MaeII	ACGT	5 cut(s)	1317, 3411, 3958, 4635, 5497
MbiI	CCGCTC	1 cut(s)	193
MfeI	CAATTG	3 cut(s)	3179, 4083, 5976
MflI	RGATCY	3 cut(s)	2451, 3970, 4381
MhlI	GDGCHC	6 cut(s)	333, 418, 2831, 3596, 3805, 6329
MlsI	TGGCCA	3 cut(s)	1870, 1949, 5411
MluNI	TGGCCA	3 cut(s)	1870, 1949, 5411
MmeI	TCCRAC	3 cut(s)	222, 1347, 4712
Mox20I	TGGCCA	3 cut(s)	1870, 1949, 5411
Mph1103I	ATGCAT	4 cut(s)	595, 1664, 4548, 5251
MroI	TCCGGA	1 cut(s)	198
MroNI	GCCGGC	1 cut(s)	5106
MroXI	GAANNNNTTC	3 cut(s)	1504, 2496, 6246
MscI	TGGCCA	3 cut(s)	1870, 1949, 5411
MslI	CAYNNNNRTG	4 cut(s)	1755, 1943, 4743, 5558
Msp20I	TGGCCA	3 cut(s)	1870, 1949, 5411
MspA1I	CMGCKG	2 cut(s)	1295, 5097
MspCI	CTTAAG	2 cut(s)	4703, 5194
MspI	CCGG	4 cut(s)	199, 4410, 5107, 5510
MspR9I	CCNGG	9 cut(s)	35, 59, 819, 1923, 2627, 2756, 4241, 4411, 5129
MunI	CAATTG	3 cut(s)	3179, 4083, 5976
Mva1269I	GAATGC	4 cut(s)	1738, 4546, 5409, 6022
MvaI	CCWGG	8 cut(s)	35, 59, 819, 1923, 2627, 2756, 4241, 5129
MvnI	CGCG	2 cut(s)	43, 1335
NaeI	GCCGGC	1 cut(s)	5108
NciI	CCSGG	1 cut(s)	4411
NdeI	CATATG	1 cut(s)	3894
NgoMIV	GCCGGC	1 cut(s)	5106
NheI	GCTAGC	1 cut(s)	793
NmeAIII	GCCGAG	1 cut(s)	4090
NmuCI	GTSAC	6 cut(s)	339, 557, 2437, 3047, 3931, 6088
NsiI	ATGCAT	4 cut(s)	595, 1664, 4548, 5251
NspI	RCATGY	6 cut(s)	1707, 1899, 3149, 4202, 4779, 5857
NspV	TTCGAA	1 cut(s)	5521
PaeI	GCATGC	2 cut(s)	1899, 4202
PaeR7I	CTCGAG	3 cut(s)	353, 4031, 6269
PagI	TCATGA	3 cut(s)	4575, 5056, 6127
PasI	CCCWGGG	1 cut(s)	4240
PciI	ACATGT	1 cut(s)	4775
PciSI	GCTCTTC	1 cut(s)	2054
PcsI	WCGNNNNNNNCGW	1 cut(s)	6276
PctI	GAATGC	4 cut(s)	1738, 4546, 5409, 6022
PdiI	GCCGGC	1 cut(s)	5108
PdmI	GAANNNNTTC	3 cut(s)	1504, 2496, 6246
PflFI	GACNNNGTC	2 cut(s)	3042, 4688
PflMI	CCANNNNNTGG	5 cut(s)	166, 2004, 2339, 3166, 3633
PfoI	TCCNGGA	1 cut(s)	817
Ppu21I	YACGTR	1 cut(s)	3412
PpuMI	RGGWCCY	3 cut(s)	61, 1171, 5724
PscI	ACATGT	1 cut(s)	4775
PshBI	ATTAAT	3 cut(s)	845, 2730, 3777
PsiI	TTATAA	1 cut(s)	3737
Psp124BI	GAGCTC	1 cut(s)	333
Psp1406I	AACGTT	1 cut(s)	1317
Psp5II	RGGWCCY	3 cut(s)	61, 1171, 5724
Psp6I	CCWGG	8 cut(s)	33, 57, 817, 1921, 2625, 2754, 4239, 5127
PspFI	CCCAGC	1 cut(s)	1236
PspGI	CCWGG	8 cut(s)	33, 57, 817, 1921, 2625, 2754, 4239, 5127
PspOMI	GGGCCC	1 cut(s)	3592
PspPPI	RGGWCCY	3 cut(s)	61, 1171, 5724
PspXI	VCTCGAGB	1 cut(s)	6269
PsrI	GAACNNNNNNTAC	2 cut(s)	1899, 1931
PstI	CTGCAG	1 cut(s)	2326
PstNI	CAGNNNCTG	2 cut(s)	1439, 3700
PsuI	RGATCY	3 cut(s)	2451, 3970, 4381
PsyI	GACNNNGTC	2 cut(s)	3042, 4688
PvuII	CAGCTG	1 cut(s)	1295
RseI	CAYNNNNRTG	4 cut(s)	1755, 1943, 4743, 5558
SacI	GAGCTC	1 cut(s)	333
SalI	GTCGAC	1 cut(s)	53
SapI	GCTCTTC	1 cut(s)	2054
ScaI	AGTACT	1 cut(s)	359
ScrFI	CCNGG	9 cut(s)	35, 59, 819, 1923, 2627, 2756, 4241, 4411, 5129
SduI	GDGCHC	6 cut(s)	333, 418, 2831, 3596, 3805, 6329
SexAI	ACCWGGT	1 cut(s)	2754
SfcI	CTRYAG	7 cut(s)	1078, 2163, 2178, 2322, 3259, 3981, 4551
Sfr274I	CTCGAG	3 cut(s)	353, 4031, 6269
SfuI	TTCGAA	1 cut(s)	5521
SinI	GGWCC	8 cut(s)	61, 1171, 2752, 2761, 3157, 5000, 5724, 6160
SlaI	CTCGAG	3 cut(s)	353, 4031, 6269
SmiMI	CAYNNNNRTG	4 cut(s)	1755, 1943, 4743, 5558
SmlI	CTYRAG	8 cut(s)	304, 344, 353, 4031, 4397, 4703, 5194, 6269
SmoI	CTYRAG	8 cut(s)	304, 344, 353, 4031, 4397, 4703, 5194, 6269
SpeI	ACTAGT	1 cut(s)	1958
SphI	GCATGC	2 cut(s)	1899, 4202
SsiI	CCGC	9 cut(s)	43, 120, 193, 1335, 5097, 5278, 5660, 5711, 6093
SspI	AATATT	4 cut(s)	1218, 2269, 2863, 4265
SstI	GAGCTC	1 cut(s)	333
StyD4I	CCNGG	9 cut(s)	33, 57, 817, 1921, 2625, 2754, 4239, 4409, 5127
StyI	CCWWGG	9 cut(s)	160, 1494, 1854, 2003, 3541, 5004, 5672, 5860, 6297
TaiI	ACGT	5 cut(s)	1320, 3414, 3961, 4638, 5500
TatI	WGTACW	6 cut(s)	357, 387, 727, 3214, 4048, 6040
TauI	GCSGC	1 cut(s)	122
TseFI	GTSAC	6 cut(s)	339, 557, 2437, 3047, 3931, 6088
Tsp45I	GTSAC	6 cut(s)	339, 557, 2437, 3047, 3931, 6088
TspGWI	ACGGA	7 cut(s)	661, 758, 3287, 3474, 4142, 4718, 6152
Tth111I	GACNNNGTC	2 cut(s)	3042, 4688
Van91I	CCANNNNNTGG	5 cut(s)	166, 2004, 2339, 3166, 3633
Vha464I	CTTAAG	2 cut(s)	4703, 5194
VpaK11BI	GGWCC	8 cut(s)	61, 1171, 2752, 2761, 3157, 5000, 5724, 6160
VspI	ATTAAT	3 cut(s)	845, 2730, 3777
XbaI	TCTAGA	3 cut(s)	493, 4855, 6013
XceI	RCATGY	6 cut(s)	1707, 1899, 3149, 4202, 4779, 5857
XcmI	CCANNNNNNNNNTGG	3 cut(s)	967, 1960, 3260
XhoI	CTCGAG	3 cut(s)	353, 4031, 6269
XmaJI	CCTAGG	1 cut(s)	5672
XmiI	GTMKAC	2 cut(s)	54, 4909
XmnI	GAANNNNTTC	3 cut(s)	1504, 2496, 6246
ZrmI	AGTACT	1 cut(s)	359
Zsp2I	ATGCAT	4 cut(s)	595, 1664, 4548, 5251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.