Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0002105

Physical Location & Seq

Genomic Coordinates Forward (+)

17663582 .. 17668581

Gene Structure 5000 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g18840.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2604 bp

ATGTTGGTTGAGTGTGCCCATTCAGCGAAAGATGGAGTTACTCGTAACCATGTATTTTCACTAATTTCCTCTGTCACAAAGATTATTCCGGAAAAAGTTTTGGAGCATGTACTGGATATTTTTACTGTTATTGGTGAAGCAGCAGTCACACAGATTGACAGCCATTCACAGCATGTGTTTGAGGATCTTATATCCACAGTTGTTCCATGCTGGTTATCTGGGACAGGCAACAATGACAAATTGCTCCAGATTTTTATCAATGTATTGCCTGAAGTTGCCGAGCATAGAAGGCTATCAATCCTTGTATACCTACTGAGGACCTTGGGAGAGGCAAATAGTTTGGCTTCATTACTTGTCCTTCTCTTCCGTTCATTGGTTACACGAAAAGGATTATCTTGCTTTGAGAACACACATACTTCAGATAGCTCCACAGCCTCATTACAGAGAGAATGGGAATATTCTCTGGGTCTCCAAATATGTGAGCAATATTCGTGCATGATATGGCTTCCCCCTTTGGTTTTGATGCTTAAACAAATAGGAGCTGGTATTCAGTCGCAAGAACTGTTTATTGAATTATTAATTGCTATGCGATTCACCTTAAACAAATTGCAAGATACAGAGTTTGCATTCAAGCTTGCATCAGGGGAAGATCCAGAAAAGATTCAGGCTACGCTGGAAGAACTCATGGAGCAGGTTGTCTCTATCCAGCAACTTGTTGATGCAACAAGGAAGAAAAAGAGTATCAATGTTTCTGTTAGAAAAGCGCTGAAGGAGTGCATGCATACTGTATTAAGGATGATTACAGTGGTCATGATCCCCCACACACACTTCAGTGGTATCACTAAGTTGCTTGGCCATAGAGATAGAAATGTGGCAAAGAAGGCACTTGGACTGTTGTGTGAAACAGTTGGGAAGCATGACATGGTCCGACCAAAGCAAAAACATAAATCCATTTCCAGTGATCGGTGGCAGCATCTAGATGAGAATTCTCTTGAATCGTTTCGCAGTTTGTGTTTGAAAATTGTTCAGTTAATTGATAATTCATCAGATGATAAGGAAGTCTCCTTGAAGGTGGCAGCGGCTTTGGCTCTAGAAGTTCTGGCCCATAGGTTTTCTTCTAATCATTCCATCTTCAATGAGTGTCTACCATATGTTACAAAAAATATTAGTATGCACAACTTGGCAGTGTCCTCTAGCTGCCTTCAAGCAACTGGTGCTTTGATTAATGTGCTCGGCCCCAGGGCACTCTCTGAGCTTCCTCACATAATGGAAAATTTGATTAGGATTTCTCGCAAAATGTTTTTATCTTCAGATATGAAAACCATATCTGGTGTGGATGGCACGGATATTGCATTACAGATACCAAAGGAATCTCTTATTTTATCAATTCTAGTCACTCTGGAGGCTGTTGTGGTTAAGCTAGGAGGTTTCTTGAACCCATATCTTGAAGAAATTACAAGAATTATAGTGCTTGATCTTGATTATGCGTCAGGGTCTGATCCGAAGCTGAAAATGAAAGCTGACTCAGTACGAAGGCTCATCACCGAGAATATCCCTGTTCGACTTGCCCTACCGCCTTTGCTGAAAATATACTCTAGTACAGTTGAGTCTGGTGATTCGAGCTTAGCAGTTTATTTTGGAATGCTGGAAAACTTGATTGGGAGAATGGATAGATCATCTGTTAGTGGTTACCATGCTAAGATCTTTGACCTCTGCTTGCTTGCTCTTGATCTACGTTGCCAACATCCTGCATTGGTTCAGAAAATTGATGATGTAGAGAAGATTGTGTTCAATGCAATGATTGCTCTCACTATGAAACTCACTGAAAGCTTGTTCAAGCCTCTTTTCATTAGGAGTATTGATTGGGCAGAGTCAGATGTGGAAGATATTGCATGTACAGGAAATATATCTAGGGCCATATCTTTCTATGGTCTGGTAAATAAACTTGCTGAGAACCATCGATCTCTTTTTGTTCCTTACTTCAAATACTTGGTGGAGGGTTGTGTGCGTTACCTTACTGTTTCTGGAGATGCAAATACTTCTGGTTCAATACGAAAAAAGAAGGCTAAGATTCAGGAAGGGAAGGACAACAGTATGTTGCTTGGAAATTGGCATCTCAGGGCTTTGGTGTTATCATCTTTACACAAGTGTTTTCTTTATGATACTAGAAGCCTGAAATTCTTGGACTCTTCAAATTTTCAGGTTCTTCTGAAACCCATTGTTTCACAGCTTGTCGCTGAACCACCATCATCTCTAGAAGAGCATCCAGACATACCATCCGTAGAGGAAGTTGATAATTTATTGGTTGTTTGTATTGGTCAAATGGCTGTGACTGTAGGAAGTGACCTTTTATGGAAGCCCTTGAATTATGAGGTGCTGATGCAGACACGCAGTGACAAGGTCCGGACCCGAATTTTGGGCCTGAGAATTGTTAAGTATTTATTGGAGCATCTGAGAGAAGAGTATCTGGTATTCCTGCCTGAGACCATTCCGATCTTGGGAGAATTGCTCGAGGATGTGGAGCTCCCTGTTAAATCTCTTGCACAGTCGATTCTCAAGGATATGGAGACCATGAGTGGTGAAAGCCTCAGGGAGTATCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006355 GO:0006356 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034455 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

BP28CT U3snoRNP10

Protein Analysis

868

Amino Acids

97.14

Weight (kDa)

6.36

Isoelectric Point (pI)

41.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06530 AT3G06530 AT3G06530 AT3G06530 AT3G06530
fragaria_vesca	FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990
malus_domestica	MD07G1249300.v1.1
prunus_persica	Prupe.2G273000_v2.0.a1 Prupe.2G273000_v2.0.a1 Prupe.2G273000_v2.0.a1
pyrus_communis	pycom01g18810 pycom01g18840 pycom05g24490 pycom07g22250 pycom07g22260
rosa_chinensis	RchiOBHm_Chr1g0373711 RchiOBHm_Chr1g0373721 RchiOBHm_Chr5g0059891 RchiOBHm_Chr7g0224071
rosa_laevigata	RLG00000026806
rosa_multiflora	Rmu_co8395535.1_g000001 Rmu_sc0002606.1_g000003 Rmu_sc0002606.1_g000005 Rmu_sc0010519.1_g000004 Rmu_sc0023430.1_g000002
rosa_roxburghii	Rroxscaffold_4G00284050 Rroxscaffold_5G00353230
rosa_rugosa	Rorug01G0379200
rosa_samantha	Rh1AG388500 Rh1BG352900 Rh1CG365800 Rh1DG383300 Rh3AG266200 Rh3DG308600
rosa_wichuraiana	Rw1G034670 Rw3G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	682
AccI	GTMKAC	2 cut(s)	306, 1144
AccIII	TCCGGA	2 cut(s)	88, 2403
AciI	CCGC	2 cut(s)	1079, 1574
AclWI	GGATC	4 cut(s)	192, 644, 808, 1493
AcoI	YGGCCR	1 cut(s)	853
AcsI	RAATTY	5 cut(s)	985, 1273, 2177, 2194, 2412
AcuI	CTGAAG	5 cut(s)	291, 402, 788, 814, 1293
AdeI	CACNNNGTG	1 cut(s)	2393
AfaI	GTAC	4 cut(s)	111, 1530, 1600, 1897
AfeI	AGCGCT	1 cut(s)	765
AfiI	CCNNNNNNNGG	4 cut(s)	373, 963, 2416, 2498
AjnI	CCWGG	1 cut(s)	1238
AjuI	GAANNNNNNNTTGG	2 cut(s)	1641, 1673
AleI	CACNNNNGTG	1 cut(s)	831
Alw21I	GWGCWC	2 cut(s)	1233, 2526
Alw26I	GTCTC	5 cut(s)	473, 703, 1066, 2477, 2561
AlwI	GGATC	4 cut(s)	192, 644, 808, 1493
AlwNI	CAGNNNCTG	1 cut(s)	1496
Ama87I	CYCGRG	1 cut(s)	2510
Aor13HI	TCCGGA	2 cut(s)	88, 2403
Aor51HI	AGCGCT	1 cut(s)	765
AoxI	GGCC	5 cut(s)	853, 1101, 1234, 1914, 2419
ApeKI	GCWGC	4 cut(s)	140, 970, 1076, 1197
ApoI	RAATTY	5 cut(s)	985, 1273, 2177, 2194, 2412
ArsI	GACNNNNNNTTYG	2 cut(s)	2398, 2430
AseI	ATTAAT	2 cut(s)	578, 1224
Asp700I	GAANNNNTTC	2 cut(s)	660, 999
AspLEI	GCGC	1 cut(s)	766
AspS9I	GGNCC	8 cut(s)	318, 925, 1102, 1235, 1914, 2401, 2406, 2419
AsuHPI	GGTGA	5 cut(s)	146, 586, 1534, 1625, 2591
AvaI	CYCGRG	1 cut(s)	2510
AvaII	GGWCC	4 cut(s)	318, 925, 2401, 2406
AxyI	CCTNAGG	1 cut(s)	2588
BaeGI	GKGCMC	2 cut(s)	19, 1246
BalI	TGGCCA	1 cut(s)	855
BanII	GRGCYC	1 cut(s)	2526
Bbv12I	GWGCWC	2 cut(s)	1233, 2526
BbvI	GCAGC	4 cut(s)	152, 982, 1088, 1184
BccI	CCATC	6 cut(s)	26, 1136, 1331, 1965, 2254, 2284
BciT130I	CCWGG	1 cut(s)	1240
BcoDI	GTCTC	5 cut(s)	473, 703, 1066, 2477, 2561
BfaI	CTAG	9 cut(s)	977, 1091, 1194, 1391, 1421, 1596, 1911, 2166, 2255
BfmI	CTRYAG	1 cut(s)	2334
BfoI	RGCGCY	1 cut(s)	767
BfuAI	ACCTGC	1 cut(s)	682
BglII	AGATCT	1 cut(s)	1701
BisI	GCNGC	5 cut(s)	141, 971, 1077, 1080, 1198
BlpI	GCTNAGC	1 cut(s)	1624
BlsI	GCNGC	5 cut(s)	142, 972, 1078, 1081, 1199
Bme1390I	CCNGG	1 cut(s)	1240
Bme18I	GGWCC	4 cut(s)	318, 925, 2401, 2406
BmeT110I	CYCGRG	1 cut(s)	2510
BmgT120I	GGNCC	8 cut(s)	318, 925, 1102, 1235, 1914, 2401, 2406, 2419
BmiI	GGNNCC	2 cut(s)	1237, 2408
BmrFI	CCNGG	1 cut(s)	1240
BmsI	GCATC	9 cut(s)	513, 647, 709, 982, 2020, 2122, 2272, 2370, 2458
BplI	GAGNNNNNCTC	2 cut(s)	2493, 2525
BpmI	CTGGAG	3 cut(s)	230, 1421, 2046
Bpu1102I	GCTNAGC	1 cut(s)	1624
BpuEI	CTTGAG	1 cut(s)	2540
Bsa29I	ATCGAT	1 cut(s)	1960
BsaBI	GATNNNNATC	1 cut(s)	254
BsaI	GGTCTC	3 cut(s)	473, 2477, 2561
BsaJI	CCNNGG	3 cut(s)	321, 1238, 1239
BsaWI	WCCGGW	2 cut(s)	88, 2403
BsaXI	ACNNNNNCTCC	1 cut(s)	2585
Bsc4I	CCNNNNNNNGG	4 cut(s)	373, 963, 2416, 2498
Bse1I	ACTGG	3 cut(s)	117, 957, 1216
Bse21I	CCTNAGG	1 cut(s)	2588
Bse3DI	GCAATG	1 cut(s)	1803
Bse8I	GATNNNNATC	1 cut(s)	254
BseAI	TCCGGA	2 cut(s)	88, 2403
BseBI	CCWGG	1 cut(s)	1240
BseCI	ATCGAT	1 cut(s)	1960
BseDI	CCNNGG	3 cut(s)	321, 1238, 1239
BseGI	GGATG	6 cut(s)	801, 1342, 1744, 2263, 2276, 2521
BseJI	GATNNNNATC	1 cut(s)	254
BseLI	CCNNNNNNNGG	4 cut(s)	373, 963, 2416, 2498
BseMI	GCAATG	1 cut(s)	1803
BseMII	CTCAG	9 cut(s)	305, 1242, 1539, 1941, 2131, 2414, 2444, 2472, 2602
BseNI	ACTGG	3 cut(s)	117, 957, 1216
BseSI	GKGCMC	2 cut(s)	19, 1246
BseXI	GCAGC	4 cut(s)	152, 982, 1088, 1184
BshFI	GGCC	5 cut(s)	855, 1103, 1236, 1916, 2421
BshVI	ATCGAT	1 cut(s)	1960
BsiHKAI	GWGCWC	2 cut(s)	1233, 2526
BsiHKCI	CYCGRG	1 cut(s)	2510
BsiSI	CCGG	2 cut(s)	89, 2404
BslFI	GGGAC	1 cut(s)	235
BslI	CCNNNNNNNGG	4 cut(s)	373, 963, 2416, 2498
BsmAI	GTCTC	5 cut(s)	473, 703, 1066, 2477, 2561
BsmFI	GGGAC	1 cut(s)	235
BsmI	GAATGC	2 cut(s)	626, 1647
BsnI	GGCC	5 cut(s)	855, 1103, 1236, 1916, 2421
Bso31I	GGTCTC	3 cut(s)	473, 2477, 2561
BsoBI	CYCGRG	1 cut(s)	2510
Bsp1286I	GDGCHC	4 cut(s)	19, 1233, 1246, 2526
Bsp13I	TCCGGA	2 cut(s)	88, 2403
Bsp1407I	TGTACA	1 cut(s)	1895
Bsp1720I	GCTNAGC	1 cut(s)	1624
BspACI	CCGC	2 cut(s)	1079, 1574
BspANI	GGCC	5 cut(s)	855, 1103, 1236, 1916, 2421
BspCNI	CTCAG	9 cut(s)	306, 1243, 1538, 1942, 2130, 2415, 2445, 2473, 2601
BspDI	ATCGAT	1 cut(s)	1960
BspEI	TCCGGA	2 cut(s)	88, 2403
BspHI	TCATGA	1 cut(s)	810
BspLI	GGNNCC	2 cut(s)	1237, 2408
BspMI	ACCTGC	1 cut(s)	682
BspPI	GGATC	4 cut(s)	192, 644, 808, 1493
BspQI	GCTCTTC	1 cut(s)	2253
BspTNI	GGTCTC	3 cut(s)	473, 2477, 2561
BsrDI	GCAATG	1 cut(s)	1803
BsrGI	TGTACA	1 cut(s)	1895
BsrI	ACTGG	3 cut(s)	117, 957, 1216
BssECI	CCNNGG	3 cut(s)	321, 1238, 1239
BssNAI	GTATAC	1 cut(s)	307
BssT1I	CCWWGG	1 cut(s)	321
Bst1107I	GTATAC	1 cut(s)	307
Bst2UI	CCWGG	1 cut(s)	1240
Bst6I	CTCTTC	4 cut(s)	368, 2194, 2253, 2454
BstAPI	GCANNNNNTGC	2 cut(s)	1214, 1802
BstAUI	TGTACA	1 cut(s)	1895
BstC8I	GCNNGC	4 cut(s)	636, 779, 1718, 1722
BstEII	GGTNACC	1 cut(s)	1688
BstF5I	GGATG	6 cut(s)	801, 1342, 1744, 2263, 2276, 2521
BstH2I	RGCGCY	1 cut(s)	767
BstHHI	GCGC	1 cut(s)	766
BstMAI	GTCTC	5 cut(s)	473, 703, 1066, 2477, 2561
BstMWI	GCNNNNNNNGC	6 cut(s)	23, 289, 881, 1085, 1214, 1802
BstNI	CCWGG	1 cut(s)	1240
BstNSI	RCATGY	4 cut(s)	110, 176, 781, 1896
BstPI	GGTNACC	1 cut(s)	1688
BstSCI	CCNGG	1 cut(s)	1238
BstSFI	CTRYAG	1 cut(s)	2334
BstSLI	GKGCMC	2 cut(s)	19, 1246
BstV1I	GCAGC	4 cut(s)	152, 982, 1088, 1184
BstX2I	RGATCY	3 cut(s)	184, 649, 1701
BstYI	RGATCY	3 cut(s)	184, 649, 1701
BstZ17I	GTATAC	1 cut(s)	307
Bsu15I	ATCGAT	1 cut(s)	1960
Bsu36I	CCTNAGG	1 cut(s)	2588
BsuRI	GGCC	5 cut(s)	855, 1103, 1236, 1916, 2421
BsuTUI	ATCGAT	1 cut(s)	1960
BtsCI	GGATG	6 cut(s)	801, 1342, 1744, 2263, 2276, 2521
BtsI	GCAGTG	2 cut(s)	1191, 2398
BtsIMutI	CAGTG	6 cut(s)	810, 838, 964, 1191, 1821, 2398
BveI	ACCTGC	1 cut(s)	682
Cac8I	GCNNGC	4 cut(s)	636, 779, 1718, 1722
CaiI	CAGNNNCTG	1 cut(s)	1496
CciI	TCATGA	1 cut(s)	810
CfoI	GCGC	1 cut(s)	766
Cfr13I	GGNCC	8 cut(s)	318, 925, 1102, 1235, 1914, 2401, 2406, 2419
ClaI	ATCGAT	1 cut(s)	1960
CseI	GACGC	1 cut(s)	1476
Csp6I	GTAC	4 cut(s)	110, 1529, 1599, 1896
CviQI	GTAC	4 cut(s)	110, 1529, 1599, 1896
DraIII	CACNNNGTG	1 cut(s)	2393
EaeI	YGGCCR	1 cut(s)	853
Eam1104I	CTCTTC	4 cut(s)	368, 2194, 2253, 2454
EarI	CTCTTC	4 cut(s)	368, 2194, 2253, 2454
Ecl136II	GAGCTC	1 cut(s)	2524
Eco130I	CCWWGG	1 cut(s)	321
Eco24I	GRGCYC	1 cut(s)	2526
Eco31I	GGTCTC	3 cut(s)	473, 2477, 2561
Eco47I	GGWCC	4 cut(s)	318, 925, 2401, 2406
Eco47III	AGCGCT	1 cut(s)	765
Eco53kI	GAGCTC	1 cut(s)	2524
Eco57I	CTGAAG	5 cut(s)	291, 402, 788, 814, 1293
Eco81I	CCTNAGG	1 cut(s)	2588
Eco88I	CYCGRG	1 cut(s)	2510
Eco91I	GGTNACC	1 cut(s)	1688
EcoICRI	GAGCTC	1 cut(s)	2524
EcoO109I	RGGNCCY	1 cut(s)	318
EcoO65I	GGTNACC	1 cut(s)	1688
EcoRI	GAATTC	1 cut(s)	985
EcoRII	CCWGG	1 cut(s)	1238
EcoT14I	CCWWGG	1 cut(s)	321
EcoT22I	ATGCAT	1 cut(s)	783
EcoT38I	GRGCYC	1 cut(s)	2526
ErhI	CCWWGG	1 cut(s)	321
FaqI	GGGAC	1 cut(s)	235
FauNDI	CATATG	1 cut(s)	1150
FblI	GTMKAC	2 cut(s)	306, 1144
Fnu4HI	GCNGC	5 cut(s)	141, 971, 1077, 1080, 1198
FokI	GGATG	6 cut(s)	808, 1349, 1731, 2250, 2263, 2528
FriOI	GRGCYC	1 cut(s)	2526
Fsp4HI	GCNGC	5 cut(s)	141, 971, 1077, 1080, 1198
FspBI	CTAG	9 cut(s)	977, 1091, 1194, 1391, 1421, 1596, 1911, 2166, 2255
GlaI	GCGC	1 cut(s)	765
GluI	GCNGC	5 cut(s)	141, 971, 1077, 1080, 1198
GsuI	CTGGAG	3 cut(s)	230, 1421, 2046
HaeII	RGCGCY	1 cut(s)	767
HaeIII	GGCC	5 cut(s)	855, 1103, 1236, 1916, 2421
HapII	CCGG	2 cut(s)	89, 2404
HgaI	GACGC	1 cut(s)	1476
HhaI	GCGC	1 cut(s)	766
Hin6I	GCGC	1 cut(s)	764
HinP1I	GCGC	1 cut(s)	764
HindIII	AAGCTT	2 cut(s)	632, 1828
HpaII	CCGG	2 cut(s)	89, 2404
HphI	GGTGA	5 cut(s)	146, 586, 1534, 1625, 2591
Hpy166II	GTNNAC	2 cut(s)	307, 1145
Hpy8I	GTNNAC	2 cut(s)	307, 1145
HpyCH4IV	ACGT	1 cut(s)	1735
HpyF10VI	GCNNNNNNNGC	6 cut(s)	23, 289, 881, 1085, 1214, 1802
HpySE526I	ACGT	1 cut(s)	1735
HspAI	GCGC	1 cut(s)	764
Kpn2I	TCCGGA	2 cut(s)	88, 2403
LguI	GCTCTTC	1 cut(s)	2253
LmnI	GCTCC	8 cut(s)	103, 249, 431, 539, 688, 2446, 2521, 2529
Lsp1109I	GCAGC	4 cut(s)	152, 982, 1088, 1184
LweI	GCATC	9 cut(s)	513, 647, 709, 982, 2020, 2122, 2272, 2370, 2458
MaeI	CTAG	9 cut(s)	977, 1091, 1194, 1391, 1421, 1596, 1911, 2166, 2255
MaeII	ACGT	1 cut(s)	1735
MflI	RGATCY	3 cut(s)	184, 649, 1701
MhlI	GDGCHC	4 cut(s)	19, 1233, 1246, 2526
MlsI	TGGCCA	1 cut(s)	855
MluNI	TGGCCA	1 cut(s)	855
MlyI	GAGTC	4 cut(s)	1517, 1616, 1880, 2180
MmeI	TCCRAC	1 cut(s)	952
Mox20I	TGGCCA	1 cut(s)	855
Mph1103I	ATGCAT	1 cut(s)	783
MroI	TCCGGA	2 cut(s)	88, 2403
MroXI	GAANNNNTTC	2 cut(s)	660, 999
MscI	TGGCCA	1 cut(s)	855
MseI	TTAA	9 cut(s)	528, 578, 599, 791, 1031, 1224, 1416, 2433, 2532
MslI	CAYNNNNRTG	2 cut(s)	831, 978
Msp20I	TGGCCA	1 cut(s)	855
MspA1I	CMGCKG	1 cut(s)	1079
MspI	CCGG	2 cut(s)	89, 2404
MspR9I	CCNGG	1 cut(s)	1240
Mva1269I	GAATGC	2 cut(s)	626, 1647
MvaI	CCWGG	1 cut(s)	1240
MwoI	GCNNNNNNNGC	6 cut(s)	23, 289, 881, 1085, 1214, 1802
NdeI	CATATG	1 cut(s)	1150
NlaIV	GGNNCC	2 cut(s)	1237, 2408
NmeAIII	GCCGAG	2 cut(s)	304, 1212
NmuCI	GTSAC	6 cut(s)	73, 145, 1393, 2329, 2342, 2393
NsiI	ATGCAT	1 cut(s)	783
NspI	RCATGY	4 cut(s)	110, 176, 781, 1896
OliI	CACNNNNGTG	1 cut(s)	831
PaeI	GCATGC	1 cut(s)	781
PaeR7I	CTCGAG	1 cut(s)	2510
PagI	TCATGA	1 cut(s)	810
PasI	CCCWGGG	1 cut(s)	1239
PciSI	GCTCTTC	1 cut(s)	2253
PctI	GAATGC	2 cut(s)	626, 1647
PdmI	GAANNNNTTC	2 cut(s)	660, 999
PfeI	GAWTC	7 cut(s)	591, 661, 995, 1370, 1616, 2071, 2551
PflFI	GACNNNGTC	2 cut(s)	923, 2399
PkrI	GCNGC	5 cut(s)	142, 972, 1078, 1081, 1199
PleI	GAGTC	4 cut(s)	1517, 1615, 1879, 2180
PpsI	GAGTC	4 cut(s)	1517, 1615, 1879, 2180
PpuMI	RGGWCCY	1 cut(s)	318
PshBI	ATTAAT	2 cut(s)	578, 1224
Psp124BI	GAGCTC	1 cut(s)	2526
Psp5II	RGGWCCY	1 cut(s)	318
Psp6I	CCWGG	1 cut(s)	1238
PspEI	GGTNACC	1 cut(s)	1688
PspGI	CCWGG	1 cut(s)	1238
PspN4I	GGNNCC	2 cut(s)	1237, 2408
PspPI	GGNCC	8 cut(s)	318, 925, 1102, 1235, 1914, 2401, 2406, 2419
PspPPI	RGGWCCY	1 cut(s)	318
PspXI	VCTCGAGB	1 cut(s)	2510
PstNI	CAGNNNCTG	1 cut(s)	1496
PsuI	RGATCY	3 cut(s)	184, 649, 1701
PsyI	GACNNNGTC	2 cut(s)	923, 2399
RsaI	GTAC	4 cut(s)	111, 1530, 1600, 1897
RsaNI	GTAC	4 cut(s)	110, 1529, 1599, 1896
RseI	CAYNNNNRTG	2 cut(s)	831, 978
SacI	GAGCTC	1 cut(s)	2526
SapI	GCTCTTC	1 cut(s)	2253
SaqAI	TTAA	9 cut(s)	528, 578, 599, 791, 1031, 1224, 1416, 2433, 2532
SatI	GCNGC	5 cut(s)	141, 971, 1077, 1080, 1198
Sau96I	GGNCC	8 cut(s)	318, 925, 1102, 1235, 1914, 2401, 2406, 2419
SchI	GAGTC	4 cut(s)	1517, 1616, 1880, 2180
ScrFI	CCNGG	1 cut(s)	1240
SduI	GDGCHC	4 cut(s)	19, 1233, 1246, 2526
SfaNI	GCATC	9 cut(s)	513, 647, 709, 982, 2020, 2122, 2272, 2370, 2458
SfcI	CTRYAG	1 cut(s)	2334
Sfr274I	CTCGAG	1 cut(s)	2510
SinI	GGWCC	4 cut(s)	318, 925, 2401, 2406
SlaI	CTCGAG	1 cut(s)	2510
SmiMI	CAYNNNNRTG	2 cut(s)	831, 978
SmlI	CTYRAG	2 cut(s)	2510, 2555
SmoI	CTYRAG	2 cut(s)	2510, 2555
SphI	GCATGC	1 cut(s)	781
SsiI	CCGC	2 cut(s)	1079, 1574
SspI	AATATT	3 cut(s)	458, 488, 1165
SspMI	CTAG	9 cut(s)	977, 1091, 1194, 1391, 1421, 1596, 1911, 2166, 2255
SstI	GAGCTC	1 cut(s)	2526
StyD4I	CCNGG	1 cut(s)	1238
StyI	CCWWGG	1 cut(s)	321
TaiI	ACGT	1 cut(s)	1738
TaqI	TCGA	5 cut(s)	1561, 1619, 1960, 2511, 2549
TatI	WGTACW	3 cut(s)	109, 1598, 1895
TauI	GCSGC	1 cut(s)	1082
TfiI	GAWTC	7 cut(s)	591, 661, 995, 1370, 1616, 2071, 2551
Tru1I	TTAA	9 cut(s)	528, 578, 599, 791, 1031, 1224, 1416, 2433, 2532
Tru9I	TTAA	9 cut(s)	528, 578, 599, 791, 1031, 1224, 1416, 2433, 2532
TscAI	CASTG	6 cut(s)	810, 838, 964, 1191, 1828, 2398
TseFI	GTSAC	6 cut(s)	73, 145, 1393, 2329, 2342, 2393
TseI	GCWGC	4 cut(s)	140, 970, 1076, 1197
Tsp45I	GTSAC	6 cut(s)	73, 145, 1393, 2329, 2342, 2393
TspDTI	ATGAA	7 cut(s)	336, 360, 1032, 1331, 1529, 1829, 1837
TspGWI	ACGGA	3 cut(s)	356, 1358, 2269
TspRI	CASTG	6 cut(s)	810, 838, 964, 1191, 1828, 2398
Tth111I	GACNNNGTC	2 cut(s)	923, 2399
VpaK11BI	GGWCC	4 cut(s)	318, 925, 2401, 2406
VspI	ATTAAT	2 cut(s)	578, 1224
XapI	RAATTY	5 cut(s)	985, 1273, 2177, 2194, 2412
XbaI	TCTAGA	3 cut(s)	976, 1090, 2254
XceI	RCATGY	4 cut(s)	110, 176, 781, 1896
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1330, 2494
XhoI	CTCGAG	1 cut(s)	2510
XmiI	GTMKAC	2 cut(s)	306, 1144
XmnI	GAANNNNTTC	2 cut(s)	660, 999
XspI	CTAG	9 cut(s)	977, 1091, 1194, 1391, 1421, 1596, 1911, 2166, 2255
Zsp2I	ATGCAT	1 cut(s)	783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.