Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003931

Physical Location & Seq

Genomic Coordinates Forward (+)

2146243 .. 2150851

Gene Structure 4609 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G06810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGGGAAGCAGCACGGGCGATCTTGTGACACGTATCCAATCAGCTCACCGTTTCGATCACGATGCCTTGTTTCGTTTTGCCGCCGACAACGTCTCTGGCTTTCCGACCAACCCTTCCCAATTCAAAGTCTCACAGTTCGGACATGGGCAGTCGAATCCAACGTTTCTGATAGAGGTTGGCTCAGGGAGTTCCTTGAAACGATACGTTTTGAGGAAGAAGCCTCCTGGCAAGCTTCTTCAATCTGCTCATGCTGTTGATCGAGAGTTTCAGGTGCTTCGGGCTTTAGGTGAACATACACAGGTTCCTGTTCCTAAAGTCTTCTGCTTATGCACTGACCCTGCTGTCATTGGGACTGCTTTTTACATTATGGAGTTTATGGAAGGACGTATTTTCATTGATCCAAAGTTGCCGAATGTAGCACCTGAAAGGAGAAATGCGATCTATCGTGCAACCGCCAAAGCCTTGGCATCTCTTCACTCTGCTGATGTGGATGCCATTGGTCTTGAGAAATATGGTCGGCGAGGCAATTACTGCAAAAGACAGATAGATAGGTGGTTCAAACAATATTTGGCTTCAACAAGTGAAGGTAAACCTGAAAGGAATCCAAAGATGTTTGAGCTTGTTGATTGGTTACGCAAAAACATCCCCGCGGAAGATTCAACTGGAGCAACATCAGGCCTTGTCCATGGAGACTTTCGCATTGACAATCTCGTTTTTCATCCTTCTGAGGATCGAGTTATTGGAATAATTGACTGGGAATTGTCCACGCTTGGGAACCAAATGTGTGATGTTGCATACAGCTGCATGCATTACATTGTGAATGTTCAGCTCGATAAGGAGCATGTTAGTGAAGGTTTTGAAACTACTGGGCTTCCAGAAGGAATGCTTTCGATGCCAGAATTTCTCTTAGAATACTGTTCTGCATCGGGAAAACCATGGCCTGCTGCAAACTGGAAGTTCTACGTAGCGTTCTCCTTATTTCGGGCTGCTTCAATCTACACAGGGGTGTACAGTAGATGGTTAATGGGGAATGCTTCTGCCGGTGAAAGAGCGCGAAATACAGGGGTTCAAGCTAATGAGCTTGTAGAGTCTGCCTTGGGTTATATTGCACGTGAAAATGTTCTTCCAGAACACCCTCCATCTGTTCAAAGAGACGTGTCTCCGTCGTATGAAAGCCTTGTGGATGGAAGCGGGAGATTCATCCCCAACAGAAAAGTATTGGAGTTAAGGCAGAAGTTGATCAAGTTTATGGAAACTCATATCTACCCAATGGAAAACGAGTTCTCCAAACTTGCTCAATCAGATATGCGATGGACCGTTCACCCTCAGGAGGAAAAGTTAAAGGAAATGGCAAAGAGAGAAGGCCTATGGAACTTATTTGTTCCTGTAGATAGTGCTGCTAGAGCTAGAAGAGAACTGGCGGCTACCGAGAATAAACATAACCTCTCGGGCAAGTCTTTTGATCAATTGTTTGGTGAGGGCCTCACGAACCTGGAGTATGGTTACCTTTGTGAGATCATGGGTCGTTCTGTTTGGGCTCCACAGGTGTTTAACTGTGGTGCACCAGATACTGGAAACATGGAGGTGATACTGCGGTATGGTAACAAAGAACAAATTTCTGAATGGCTTATTCCGTTGCTCGAGGGAAGAATTCGTTCTGGATTTGCTATGACTGAGCCACAAGTTGCATCGTCTGATGCAACCAATATTGAATGCTCTATCCGAAGACAAGGTGATTCATACGTCATTAATGGCACAAAATGGTGGACAAGTGGAGCTATGGATCCCAGGTGCAGAGTCCTTATTCTCATGGGAAAAACTGATTTCAACGCCCCAAAACATAAGCAGCAGTCTATGATATTAGTGGACATGCGGACTCCAGGTATAAGTGTGAAGAGGCCTCTCACAGTGTTTGGTTTTGATGACGCACCTCATGGACATGCTGAAATTTCTTTTGAAAATGTGGTTGTCCCGGCGAAGAACATTCTCCTTGGAGAAGGCCGAGGATTCGAGATTGCTCAGGGTAGGTTAGGCCCTGGAAGACTGCACCATTGCATGAGACTAATAGGTGCAGCAGAGCGTGGAATGGAGCTAATGGCTCAAAGAGCTCTGAGTAGAAAAACTTTTGGGAAGTTCATTGCGCAGCACGGTTCTTTCGTCTCTGATCTTGCAAAGTTACGGGTAGAGCTAGAAGGAACCCGATTGTTGGTTCTAGAAGCTGCTGATCATCTTGATAAATTTGGAAACAAAAAAGCTCGAGGAATTCTCGCAATGGCCAAGGTTGCAGCTCCAAACATGGCATTGAAGGTACTAGACACGGCAATACAAGTTCATGGAGCAGCCGGTGTATCCTCGGACACAGTTTTAGCGCATTTGTGGGCTACAGCTAGAACACTGAGGATTGCTGATGGACCTGATGAGGTTCATCTTGGGACCATTGGCAAGTTAGAACTGCAAAGAGCTTCAAAGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003995 GO:0005488 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016042 GO:0016049 GO:0016054 GO:0016491 GO:0016627 GO:0019395 GO:0019752 GO:0021700 GO:0022622 GO:0030154 GO:0030258 GO:0032501 GO:0032502 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0040007 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0046395 GO:0048037 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050660 GO:0050662 GO:0055114 GO:0060560 GO:0071695 GO:0071704 GO:0072329 GO:0080147 GO:0090558 GO:0090627 GO:0097159 GO:0099402 GO:1901265 GO:1901363 GO:1901575 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00071 ko00280 ko00410 ko00640 ko01100 ko01110 ko01130 ko01200 ko01212 ko03320 map00071 map00280 map00410 map00640 map01100 map01110 map01130 map01200 map01212 map03320

Pfam Domains

Protein Families

APH Acyl-CoA_dh_1 Acyl-CoA_dh_M Acyl-CoA_dh_N

Protein Analysis

824

Amino Acids

91.71

Weight (kDa)

8.56

Isoelectric Point (pI)

38.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APH	PF01636	43 - 271	4.4e-49	Phosphotransferase enzyme family
Acyl-CoA_dh_M	PF02770	554 - 655	1.2e-19	Acyl-CoA dehydrogenase, middle domain
Acyl-CoA_dh_1	PF00441	667 - 815	2.8e-35	Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_2	PF08028	683 - 797	1.3e-06	Acyl-CoA dehydrogenase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003931)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06810
fragaria_vesca	FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700
malus_domestica	MD13G1164300.v1.1 MD16G1164100.v1.1
prunus_persica	Prupe.1G131800_v2.0.a1 Prupe.1G131800_v2.0.a1 Prupe.1G131800_v2.0.a1
pyrus_communis	pycom13g14030 pycom16g13880 pycom16g13890
rosa_chinensis	RchiOBHm_Chr3g0480631 RchiOBHm_Chr4g0423401 RchiOBHm_Chr6g0311831
rosa_laevigata	RLG00000007561
rosa_multiflora	Rmu_sc0002752.1_g000004 Rmu_ssc0000174.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365600
rosa_rugosa	Rorug04G0187300
rosa_samantha	Rh1BG304700 Rh3AG236600 Rh3DG262000 Rh4AG246200 Rh4AG246300 Rh4BG251700 Rh4CG260200 Rh4DG247100
rosa_wichuraiana	Rw4G021160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	341
Acc16I	TGCGCA	1 cut(s)	2142
AccB7I	CCANNNNNTGG	1 cut(s)	1571
AccII	CGCG	2 cut(s)	650, 1054
AciI	CCGC	8 cut(s)	81, 453, 648, 650, 1191, 1421, 1594, 1873
AclI	AACGTT	1 cut(s)	161
AclWI	GGATC	4 cut(s)	392, 738, 1778, 1791
AcoI	YGGCCR	1 cut(s)	2274
AcsI	RAATTY	6 cut(s)	899, 1614, 1650, 1947, 2237, 2262
AcvI	CACGTG	1 cut(s)	1112
AfaI	GTAC	2 cut(s)	1010, 2310
AfiI	CCNNNNNNNGG	5 cut(s)	771, 981, 1330, 1571, 2206
AflIII	ACRYGT	2 cut(s)	29, 1155
AjiI	CACGTC	1 cut(s)	1156
AjnI	CCWGG	5 cut(s)	223, 1491, 1787, 1879, 2035
AleI	CACNNNNGTG	1 cut(s)	1004
AloI	GAACNNNNNNTCC	2 cut(s)	1265, 1297
Alw21I	GWGCWC	2 cut(s)	1564, 2110
Alw26I	GTCTC	7 cut(s)	97, 133, 684, 1146, 1164, 2053, 2164
Alw44I	GTGCAC	1 cut(s)	1560
AlwI	GGATC	4 cut(s)	392, 738, 1778, 1791
AlwNI	CAGNNNCTG	1 cut(s)	1571
Ama87I	CYCGRG	3 cut(s)	1447, 1640, 2256
AoxI	GGCC	8 cut(s)	676, 938, 1363, 1480, 1898, 1999, 2032, 2274
ApaLI	GTGCAC	1 cut(s)	1560
ApoI	RAATTY	6 cut(s)	899, 1614, 1650, 1947, 2237, 2262
AseI	ATTAAT	1 cut(s)	1749
Asp700I	GAANNNNTTC	3 cut(s)	886, 1119, 1654
AspLEI	GCGC	3 cut(s)	1054, 2143, 2371
AspS9I	GGNCC	5 cut(s)	1314, 1480, 2033, 2411, 2433
AsuC2I	CCSGG	1 cut(s)	1973
AsuHPI	GGTGA	7 cut(s)	38, 299, 1055, 1313, 1487, 1597, 1745
AvaI	CYCGRG	3 cut(s)	1447, 1640, 2256
AvaII	GGWCC	3 cut(s)	1314, 2411, 2433
AxyI	CCTNAGG	1 cut(s)	1326
BaeGI	GKGCMC	1 cut(s)	1564
BaeI	ACNNNNGTAYC	2 cut(s)	1580, 1613
BalI	TGGCCA	1 cut(s)	2276
BamHI	GGATCC	1 cut(s)	1783
BanII	GRGCYC	2 cut(s)	1540, 2110
BbrPI	CACGTG	1 cut(s)	1112
BbsI	GAAGAC	3 cut(s)	310, 1732, 2047
Bbv12I	GWGCWC	2 cut(s)	1564, 2110
BccI	CCATC	5 cut(s)	1011, 1147, 1178, 1305, 2402
BceAI	ACGGC	1 cut(s)	2334
BcgI	CGANNNNNNTGC	2 cut(s)	44, 78
BciT130I	CCWGG	5 cut(s)	225, 1493, 1789, 1881, 2037
BciVI	GTATCC	2 cut(s)	44, 2359
BclI	TGATCA	3 cut(s)	1239, 1462, 2224
BcnI	CCSGG	1 cut(s)	1973
BcoDI	GTCTC	7 cut(s)	97, 133, 684, 1146, 1164, 2053, 2164
BfaI	CTAG	6 cut(s)	1401, 1407, 2189, 2213, 2312, 2388
BfmI	CTRYAG	2 cut(s)	1386, 2382
BfuI	GTATCC	2 cut(s)	44, 2359
Bme1390I	CCNGG	6 cut(s)	225, 1493, 1789, 1881, 1973, 2037
Bme18I	GGWCC	3 cut(s)	1314, 2411, 2433
BmeT110I	CYCGRG	3 cut(s)	1447, 1640, 2256
BmgBI	CACGTC	1 cut(s)	1156
BmgT120I	GGNCC	5 cut(s)	1314, 1480, 2033, 2411, 2433
BmiI	GGNNCC	6 cut(s)	303, 776, 1539, 1785, 2197, 2434
BmrFI	CCNGG	6 cut(s)	225, 1493, 1789, 1881, 1973, 2037
BmrI	ACTGGG	2 cut(s)	763, 876
BmsI	GCATC	7 cut(s)	52, 476, 481, 882, 932, 1687, 1697
BmuI	ACTGGG	2 cut(s)	763, 876
BpiI	GAAGAC	3 cut(s)	310, 1732, 2047
BplI	GAGNNNNNCTC	4 cut(s)	164, 196, 2250, 2282
BpmI	CTGGAG	3 cut(s)	684, 1514, 1863
Bpu10I	CCTNAGC	2 cut(s)	181, 2019
BpuEI	CTTGAG	1 cut(s)	524
BpuMI	CCSGG	1 cut(s)	1973
BsaAI	YACGTR	3 cut(s)	32, 964, 1112
BsaXI	ACNNNNNCTCC	4 cut(s)	1268, 1298, 1322, 1352
Bsc4I	CCNNNNNNNGG	5 cut(s)	771, 981, 1330, 1571, 2206
Bse118I	RCCGGY	2 cut(s)	1040, 2342
Bse1I	ACTGG	6 cut(s)	667, 758, 871, 956, 1422, 1576
Bse21I	CCTNAGG	1 cut(s)	1326
Bse3DI	GCAATG	3 cut(s)	2050, 2136, 2277
BseBI	CCWGG	5 cut(s)	225, 1493, 1789, 1881, 2037
BseGI	GGATG	5 cut(s)	496, 642, 718, 1189, 1200
BseLI	CCNNNNNNNGG	5 cut(s)	771, 981, 1330, 1571, 2206
BseMI	GCAATG	3 cut(s)	2050, 2136, 2277
BseMII	CTCAG	7 cut(s)	195, 717, 1340, 1665, 2033, 2102, 2387
BseNI	ACTGG	6 cut(s)	667, 758, 871, 956, 1422, 1576
BseSI	GKGCMC	1 cut(s)	1564
BsgI	GTGCAG	3 cut(s)	1813, 2030, 2091
Bsh1236I	CGCG	2 cut(s)	650, 1054
BshFI	GGCC	8 cut(s)	678, 940, 1365, 1482, 1900, 2001, 2034, 2276
BsiHKAI	GWGCWC	2 cut(s)	1564, 2110
BsiHKCI	CYCGRG	3 cut(s)	1447, 1640, 2256
BsiSI	CCGG	3 cut(s)	1041, 1973, 2343
BslFI	GGGAC	3 cut(s)	364, 1955, 2446
BslI	CCNNNNNNNGG	5 cut(s)	771, 981, 1330, 1571, 2206
BsmAI	GTCTC	7 cut(s)	97, 133, 684, 1146, 1164, 2053, 2164
BsmBI	CGTCTC	3 cut(s)	97, 1146, 2164
BsmFI	GGGAC	3 cut(s)	364, 1955, 2446
BsmI	GAATGC	3 cut(s)	888, 1036, 1718
BsnI	GGCC	8 cut(s)	678, 940, 1365, 1482, 1900, 2001, 2034, 2276
BsoBI	CYCGRG	3 cut(s)	1447, 1640, 2256
Bsp1286I	GDGCHC	3 cut(s)	1540, 1564, 2110
Bsp1407I	TGTACA	1 cut(s)	1008
Bsp19I	CCATGG	2 cut(s)	685, 935
BspACI	CCGC	8 cut(s)	81, 453, 648, 650, 1191, 1421, 1594, 1873
BspANI	GGCC	8 cut(s)	678, 940, 1365, 1482, 1900, 2001, 2034, 2276
BspCNI	CTCAG	7 cut(s)	194, 718, 1339, 1666, 2032, 2103, 2388
BspFNI	CGCG	2 cut(s)	650, 1054
BspLI	GGNNCC	6 cut(s)	303, 776, 1539, 1785, 2197, 2434
BspPI	GGATC	4 cut(s)	392, 738, 1778, 1791
BsrDI	GCAATG	3 cut(s)	2050, 2136, 2277
BsrFI	RCCGGY	2 cut(s)	1040, 2342
BsrGI	TGTACA	1 cut(s)	1008
BsrI	ACTGG	6 cut(s)	667, 758, 871, 956, 1422, 1576
BssAI	RCCGGY	2 cut(s)	1040, 2342
BssT1I	CCWWGG	6 cut(s)	462, 685, 935, 1095, 1990, 2277
Bst2UI	CCWGG	5 cut(s)	225, 1493, 1789, 1881, 2037
Bst4CI	ACNGT	9 cut(s)	50, 135, 917, 1013, 1318, 1556, 1909, 2150, 2362
Bst6I	CTCTTC	3 cut(s)	477, 1405, 1889
BstAPI	GCANNNNNTGC	1 cut(s)	531
BstAUI	TGTACA	1 cut(s)	1008
BstBAI	YACGTR	3 cut(s)	32, 964, 1112
BstC8I	GCNNGC	3 cut(s)	230, 806, 942
BstDEI	CTNAG	8 cut(s)	181, 726, 907, 1326, 1674, 2019, 2111, 2396
BstDSI	CCRYGG	3 cut(s)	648, 685, 935
BstEII	GGTNACC	1 cut(s)	1502
BstF5I	GGATG	5 cut(s)	496, 642, 718, 1189, 1200
BstFNI	CGCG	2 cut(s)	650, 1054
BstHHI	GCGC	3 cut(s)	1054, 2143, 2371
BstMAI	GTCTC	7 cut(s)	97, 133, 684, 1146, 1164, 2053, 2164
BstMWI	GCNNNNNNNGC	6 cut(s)	15, 531, 892, 1403, 2105, 2282
BstNI	CCWGG	5 cut(s)	225, 1493, 1789, 1881, 2037
BstNSI	RCATGY	4 cut(s)	808, 845, 1873, 1943
BstPI	GGTNACC	1 cut(s)	1502
BstSCI	CCNGG	6 cut(s)	223, 1491, 1787, 1879, 1971, 2035
BstSFI	CTRYAG	2 cut(s)	1386, 2382
BstSLI	GKGCMC	1 cut(s)	1564
BstSNI	TACGTA	1 cut(s)	964
BstUI	CGCG	2 cut(s)	650, 1054
BstV2I	GAAGAC	3 cut(s)	310, 1732, 2047
BstX2I	RGATCY	1 cut(s)	1783
BstXI	CCANNNNNNTGG	1 cut(s)	463
BstYI	RGATCY	1 cut(s)	1783
Bsu36I	CCTNAGG	1 cut(s)	1326
BsuI	GTATCC	2 cut(s)	44, 2359
BsuRI	GGCC	8 cut(s)	678, 940, 1365, 1482, 1900, 2001, 2034, 2276
BtgI	CCRYGG	3 cut(s)	648, 685, 935
BtgZI	GCGATG	1 cut(s)	1324
BtrI	CACGTC	1 cut(s)	1156
BtsCI	GGATG	5 cut(s)	496, 642, 718, 1189, 1200
BtsIMutI	CAGTG	3 cut(s)	330, 1914, 2393
Cac8I	GCNNGC	3 cut(s)	230, 806, 942
CaiI	CAGNNNCTG	1 cut(s)	1571
CfoI	GCGC	3 cut(s)	1054, 2143, 2371
Cfr10I	RCCGGY	2 cut(s)	1040, 2342
Cfr13I	GGNCC	5 cut(s)	1314, 1480, 2033, 2411, 2433
Cfr42I	CCGCGG	1 cut(s)	651
CseI	GACGC	1 cut(s)	1934
Csp6I	GTAC	2 cut(s)	1009, 2309
CviQI	GTAC	2 cut(s)	1009, 2309
DdeI	CTNAG	8 cut(s)	181, 726, 907, 1326, 1674, 2019, 2111, 2396
DrdI	GACNNNNNNGTC	1 cut(s)	341
DseDI	GACNNNNNNGTC	1 cut(s)	341
EaeI	YGGCCR	1 cut(s)	2274
Eam1104I	CTCTTC	3 cut(s)	477, 1405, 1889
EarI	CTCTTC	3 cut(s)	477, 1405, 1889
Ecl136II	GAGCTC	1 cut(s)	2108
Eco105I	TACGTA	1 cut(s)	964
Eco130I	CCWWGG	6 cut(s)	462, 685, 935, 1095, 1990, 2277
Eco147I	AGGCCT	3 cut(s)	678, 1365, 1900
Eco24I	GRGCYC	2 cut(s)	1540, 2110
Eco47I	GGWCC	3 cut(s)	1314, 2411, 2433
Eco53kI	GAGCTC	1 cut(s)	2108
Eco72I	CACGTG	1 cut(s)	1112
Eco81I	CCTNAGG	1 cut(s)	1326
Eco88I	CYCGRG	3 cut(s)	1447, 1640, 2256
Eco91I	GGTNACC	1 cut(s)	1502
EcoICRI	GAGCTC	1 cut(s)	2108
EcoO109I	RGGNCCY	2 cut(s)	1480, 2033
EcoO65I	GGTNACC	1 cut(s)	1502
EcoRI	GAATTC	2 cut(s)	1650, 2262
EcoRII	CCWGG	5 cut(s)	223, 1491, 1787, 1879, 2035
EcoT14I	CCWWGG	6 cut(s)	462, 685, 935, 1095, 1990, 2277
EcoT22I	ATGCAT	1 cut(s)	810
EcoT38I	GRGCYC	2 cut(s)	1540, 2110
ErhI	CCWWGG	6 cut(s)	462, 685, 935, 1095, 1990, 2277
Esp3I	CGTCTC	3 cut(s)	97, 1146, 2164
FalI	AAGNNNNNCTT	2 cut(s)	870, 902
FaqI	GGGAC	3 cut(s)	364, 1955, 2446
FauI	CCCGC	2 cut(s)	655, 1184
FbaI	TGATCA	3 cut(s)	1239, 1462, 2224
FokI	GGATG	5 cut(s)	503, 629, 705, 1187, 1196
FriOI	GRGCYC	2 cut(s)	1540, 2110
FspBI	CTAG	6 cut(s)	1401, 1407, 2189, 2213, 2312, 2388
FspI	TGCGCA	1 cut(s)	2142
GlaI	GCGC	3 cut(s)	1053, 2142, 2370
GsuI	CTGGAG	3 cut(s)	684, 1514, 1863
HaeIII	GGCC	8 cut(s)	678, 940, 1365, 1482, 1900, 2001, 2034, 2276
HapII	CCGG	3 cut(s)	1041, 1973, 2343
HgaI	GACGC	1 cut(s)	1934
HhaI	GCGC	3 cut(s)	1054, 2143, 2371
Hin6I	GCGC	3 cut(s)	1052, 2141, 2369
HinP1I	GCGC	3 cut(s)	1052, 2141, 2369
HindIII	AAGCTT	2 cut(s)	230, 2468
HinfI	GANTC	9 cut(s)	154, 601, 656, 1088, 1197, 1736, 1797, 1876, 2007
HpaII	CCGG	3 cut(s)	1041, 1973, 2343
HphI	GGTGA	7 cut(s)	38, 299, 1055, 1313, 1487, 1597, 1745
Hpy166II	GTNNAC	8 cut(s)	290, 590, 765, 1009, 1321, 1562, 1767, 1867
Hpy8I	GTNNAC	8 cut(s)	290, 590, 765, 1009, 1321, 1562, 1767, 1867
Hpy99I	CGWCG	1 cut(s)	1168
HpyCH4III	ACNGT	9 cut(s)	50, 135, 917, 1013, 1318, 1556, 1909, 2150, 2362
HpyCH4IV	ACGT	9 cut(s)	31, 90, 161, 204, 385, 963, 1111, 1155, 1743
HpyF10VI	GCNNNNNNNGC	6 cut(s)	15, 531, 892, 1403, 2105, 2282
HpyF3I	CTNAG	8 cut(s)	181, 726, 907, 1326, 1674, 2019, 2111, 2396
HpySE526I	ACGT	9 cut(s)	31, 90, 161, 204, 385, 963, 1111, 1155, 1743
HspAI	GCGC	3 cut(s)	1052, 2141, 2369
Ksp22I	TGATCA	3 cut(s)	1239, 1462, 2224
KspI	CCGCGG	1 cut(s)	651
LmnI	GCTCC	7 cut(s)	665, 838, 1543, 1775, 2089, 2293, 2336
LweI	GCATC	7 cut(s)	52, 476, 481, 882, 932, 1687, 1697
MaeI	CTAG	6 cut(s)	1401, 1407, 2189, 2213, 2312, 2388
MaeII	ACGT	9 cut(s)	31, 90, 161, 204, 385, 963, 1111, 1155, 1743
MaeIII	GTNAC	5 cut(s)	25, 630, 1502, 1601, 2175
MfeI	CAATTG	1 cut(s)	1466
MflI	RGATCY	1 cut(s)	1783
MhlI	GDGCHC	3 cut(s)	1540, 1564, 2110
MlsI	TGGCCA	1 cut(s)	2276
MluNI	TGGCCA	1 cut(s)	2276
MlyI	GAGTC	3 cut(s)	1097, 1806, 1870
MmeI	TCCRAC	2 cut(s)	128, 182
Mox20I	TGGCCA	1 cut(s)	2276
Mph1103I	ATGCAT	1 cut(s)	810
MroXI	GAANNNNTTC	3 cut(s)	886, 1119, 1654
MscI	TGGCCA	1 cut(s)	2276
MseI	TTAA	6 cut(s)	1022, 1226, 1340, 1551, 1749, 2473
MslI	CAYNNNNRTG	4 cut(s)	846, 1004, 1583, 1938
Msp20I	TGGCCA	1 cut(s)	2276
MspA1I	CMGCKG	2 cut(s)	650, 801
MspI	CCGG	3 cut(s)	1041, 1973, 2343
MspR9I	CCNGG	6 cut(s)	225, 1493, 1789, 1881, 1973, 2037
MunI	CAATTG	1 cut(s)	1466
Mva1269I	GAATGC	3 cut(s)	888, 1036, 1718
MvaI	CCWGG	5 cut(s)	225, 1493, 1789, 1881, 2037
MvnI	CGCG	2 cut(s)	650, 1054
MwoI	GCNNNNNNNGC	6 cut(s)	15, 531, 892, 1403, 2105, 2282
NciI	CCSGG	1 cut(s)	1973
NcoI	CCATGG	2 cut(s)	685, 935
NlaIV	GGNNCC	6 cut(s)	303, 776, 1539, 1785, 2197, 2434
NmeAIII	GCCGAG	1 cut(s)	2027
NmuCI	GTSAC	1 cut(s)	25
NsbI	TGCGCA	1 cut(s)	2142
NsiI	ATGCAT	1 cut(s)	810
NspI	RCATGY	4 cut(s)	808, 845, 1873, 1943
OliI	CACNNNNGTG	1 cut(s)	1004
PaeI	GCATGC	1 cut(s)	808
PaeR7I	CTCGAG	2 cut(s)	1640, 2256
PceI	AGGCCT	3 cut(s)	678, 1365, 1900
PcsI	WCGNNNNNNNCGW	2 cut(s)	158, 2154
PctI	GAATGC	3 cut(s)	888, 1036, 1718
PdmI	GAANNNNTTC	3 cut(s)	886, 1119, 1654
PfeI	GAWTC	6 cut(s)	154, 601, 656, 1197, 1736, 2007
PflFI	GACNNNGTC	1 cut(s)	89
PflMI	CCANNNNNTGG	1 cut(s)	1571
PleI	GAGTC	3 cut(s)	1096, 1805, 1870
PmaCI	CACGTG	1 cut(s)	1112
PmlI	CACGTG	1 cut(s)	1112
PpsI	GAGTC	3 cut(s)	1096, 1805, 1870
Ppu21I	YACGTR	3 cut(s)	32, 964, 1112
PshBI	ATTAAT	1 cut(s)	1749
Psp124BI	GAGCTC	1 cut(s)	2110
Psp1406I	AACGTT	1 cut(s)	161
Psp6I	CCWGG	5 cut(s)	223, 1491, 1787, 1879, 2035
PspCI	CACGTG	1 cut(s)	1112
PspEI	GGTNACC	1 cut(s)	1502
PspGI	CCWGG	5 cut(s)	223, 1491, 1787, 1879, 2035
PspN4I	GGNNCC	6 cut(s)	303, 776, 1539, 1785, 2197, 2434
PspPI	GGNCC	5 cut(s)	1314, 1480, 2033, 2411, 2433
PspXI	VCTCGAGB	2 cut(s)	1640, 2256
PstNI	CAGNNNCTG	1 cut(s)	1571
PsuI	RGATCY	1 cut(s)	1783
PsyI	GACNNNGTC	1 cut(s)	89
PvuII	CAGCTG	1 cut(s)	801
RsaI	GTAC	2 cut(s)	1010, 2310
RsaNI	GTAC	2 cut(s)	1009, 2309
RseI	CAYNNNNRTG	4 cut(s)	846, 1004, 1583, 1938
SacI	GAGCTC	1 cut(s)	2110
SacII	CCGCGG	1 cut(s)	651
SaqAI	TTAA	6 cut(s)	1022, 1226, 1340, 1551, 1749, 2473
Sau96I	GGNCC	5 cut(s)	1314, 1480, 2033, 2411, 2433
SchI	GAGTC	3 cut(s)	1097, 1806, 1870
ScrFI	CCNGG	6 cut(s)	225, 1493, 1789, 1881, 1973, 2037
SduI	GDGCHC	3 cut(s)	1540, 1564, 2110
SfaNI	GCATC	7 cut(s)	52, 476, 481, 882, 932, 1687, 1697
SfcI	CTRYAG	2 cut(s)	1386, 2382
Sfr274I	CTCGAG	2 cut(s)	1640, 2256
Sfr303I	CCGCGG	1 cut(s)	651
SgrBI	CCGCGG	1 cut(s)	651
SinI	GGWCC	3 cut(s)	1314, 2411, 2433
SlaI	CTCGAG	2 cut(s)	1640, 2256
SmiMI	CAYNNNNRTG	4 cut(s)	846, 1004, 1583, 1938
SmlI	CTYRAG	3 cut(s)	503, 1640, 2256
SmoI	CTYRAG	3 cut(s)	503, 1640, 2256
SnaBI	TACGTA	1 cut(s)	964
SphI	GCATGC	1 cut(s)	808
SseBI	AGGCCT	3 cut(s)	678, 1365, 1900
SsiI	CCGC	8 cut(s)	81, 453, 648, 650, 1191, 1421, 1594, 1873
SspI	AATATT	2 cut(s)	566, 1708
SspMI	CTAG	6 cut(s)	1401, 1407, 2189, 2213, 2312, 2388
SstI	GAGCTC	1 cut(s)	2110
StuI	AGGCCT	3 cut(s)	678, 1365, 1900
StyD4I	CCNGG	6 cut(s)	223, 1491, 1787, 1879, 1971, 2035
StyI	CCWWGG	6 cut(s)	462, 685, 935, 1095, 1990, 2277
TaaI	ACNGT	9 cut(s)	50, 135, 917, 1013, 1318, 1556, 1909, 2150, 2362
TaiI	ACGT	9 cut(s)	34, 93, 164, 207, 388, 966, 1114, 1158, 1746
TaqI	TCGA	9 cut(s)	54, 152, 259, 733, 831, 890, 1641, 2010, 2257
TatI	WGTACW	1 cut(s)	1008
TauI	GCSGC	2 cut(s)	83, 1424
TfiI	GAWTC	6 cut(s)	154, 601, 656, 1197, 1736, 2007
Tru1I	TTAA	6 cut(s)	1022, 1226, 1340, 1551, 1749, 2473
Tru9I	TTAA	6 cut(s)	1022, 1226, 1340, 1551, 1749, 2473
TscAI	CASTG	3 cut(s)	337, 1914, 2400
TseFI	GTSAC	1 cut(s)	25
Tsp45I	GTSAC	1 cut(s)	25
TspDTI	ATGAA	8 cut(s)	382, 707, 1185, 1189, 1728, 2125, 2321, 2414
TspGWI	ACGGA	2 cut(s)	1152, 1623
TspRI	CASTG	3 cut(s)	337, 1914, 2400
Tth111I	GACNNNGTC	1 cut(s)	89
Van91I	CCANNNNNTGG	1 cut(s)	1571
VneI	GTGCAC	1 cut(s)	1560
VpaK11BI	GGWCC	3 cut(s)	1314, 2411, 2433
VspI	ATTAAT	1 cut(s)	1749
XapI	RAATTY	6 cut(s)	899, 1614, 1650, 1947, 2237, 2262
XbaI	TCTAGA	1 cut(s)	2212
XceI	RCATGY	4 cut(s)	808, 845, 1873, 1943
XhoI	CTCGAG	2 cut(s)	1640, 2256
XmnI	GAANNNNTTC	3 cut(s)	886, 1119, 1654
XspI	CTAG	6 cut(s)	1401, 1407, 2189, 2213, 2312, 2388
Zsp2I	ATGCAT	1 cut(s)	810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.