Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003931

Physical Location & Seq

Genomic Coordinates Forward (+)

10374312 .. 10380360

Gene Structure 6049 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G131800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2457 bp

ATGGATCGAAAAGCTCTCGACTTCGACCTCAAGGCCTTGCTTTCCTACGCCTCCACTAACGTCACTGGCTTTCCTCCCTCTCCCTCTAATTTCACAGTCTCGAAGTTTGGGCATGGGCAATCGAACCCGACGTATAAGCTGGAGGTGAGTTCGGGGGCGTCGCTGAAACGCTACGTTTTGAGAAAGAAGCCTGCGGGGAAGTTGCTCCCGTCTGCTCATGCCGTCGAGAGAGAGTTCCAGGTTCTTCAGGCATTGGGTACTCATACACTGGTTCCGGTTCCTAAGGTGTTCTGTTTGTGTACCGACCCAAGCGTGATTGGAACACCCTTTTACATCATGGAGTTTTTGGAAGGACGCATTTTTCTCGACCCCAAGCTACCGGGTGTAACACCTGAGAAGAGGAGGGCACTTTACCAAGCAACGGCAAAAGCTTTAGCATCCCTACATTCTGCTGATGTTGATGCCATTGGTCTAGGAAAATATGGGCGCCGCGACAACTATTGTAAACGGCAGGTAGAGAGGTGGGCAAAGCAATATATTGCCTCAACTGGTGAGGGCAAGCCCAAGAGGAATCCAAAGATGTTTGAGCTGATTGATTGGTTACAGCAGCACATTCCTCTTGAAGATTCTTCAGGAGCTGCAGCTGGCTTAGTTCATGGGGACTTTCGCATTGACAATCTTGTGTTTCATCCTATTGAGGATCGAGTCATTGGCATTCTTGACTGGGAATTGTCTACTCTTGGAAACCAAATGTGTGATGTTGCGTACAGCTCTTTGCCTTACAACGTGGACCTTGGGGTTGAACATGGTGAAGGTTTGGAACAGACTGGGGTTCCAGAAGGGATTCCGTCTCAGGCACAGTATGTGGCAGAATACTGCTCTTCATCTGGAAAGCCATGGCCATCTTCGGAGTGGAAGTTCTATATTGCCTTTTCTTTATTTCGCGGAGCATCAATTTATGCAGGGATATATAGTAGATGGATCATGGGTAATGCTTCAGGAGGAGAGAGCGCCCAGCATGCAGGGGAAAGAGCTAATTTCATTATAGACTTTGCATGGGAATTTATTAGACGAGAATCTGTGCTTCCCAAGCATCCTCCATCAGGCGCTTTTGTTTCTCAAGACTACTTGAAAAGATCTGGACAAGAAAGTGAAGATCAAGTATTTTCAAAAGGGGGAGGGAAGTTTGTCCCCGGTAAAAGGGTTTTGGAATTGCGAAACAGGTTGTTAAAGTTCCTGGAAGATCACATATATCCCATGGAAAAGGAATTCTACAAACTTGCTGAGTCTACCTCACGTTGGACAGTCCATCCAGAGGAGGAGAGGTTAAAGGAGCTAGCAAAGAAAGAAGGCCTATGGAACTTATGGATACCTTTTGATAGTGCTGCCAGGGCCAGAAAATTGATTTTTGATGGAAGCAATCATCTTCTATCGGAGAATACCTACGATCGCTTATTGGGCGCAGGTCTTTCAAACCTCGAATATGGATATCTTTGTGAGATCATGGGTCGTTCTGTTTGGGCTCCACAAGTGTTCAATTGTGGTGCACCTGACACGGGAAATATGGAGGTATTGTTGCGGTATGGGAGCAAAGAGCAGCTACTTGAATGGCTTCTTCCTTTGCTTGAGGGAAAAATCAGGTCAGGATTCGCAATGACGGAACCTAGAGTTGCATCCTCTGATGCAACCAATATCGAGTGTTCTATTAAAAGACAAGGAGATTCATACATAATCAATGGAATAAAATGGTGGACAAGTGGCGCTATGGATCCGAGGTGCAGACTTCTTATAGTTATGGGAAAAACCGACTTCAATGCTGCCATGCATAAGCAGCAATCTATGATCTTAGTGGATATCCAAACTCCAGGTGTACACATAAAGAGACCACTTACAGTTTTTGGCTTTGATGATGCACCTCATGGGCATGCAGAAGTACTATTTGAGAATGTACGTGTCCCAGCAAAGAATATTCTACTAGGAGAAGGACGTGGGTTTGAGATTGCACAGGGTAGACTAGGCCCAGGAAGGTTGCACCATTGCATGAGACTGATGGGAGCTGCTGAGCGTGGCATGCAGATAATGGCTCAAAGGGCTCTTAGTAGAAAAGTTTTCGGGAAGTTGATTGCTGAACAGGGCTCATTTCGTTCAGATATTGCAAAGTGTCGAATAGAGCTAGAGAAAACCAGATTGTTGGTTCTGGAGGCAGCTGATCAACTTGATAGACTTGGAAACAAAAAAGCCCGAGGAACTTTAGCAATGGCAAAGGTAGCAGCCCCAAACATGGCGCTGATGGTGCTTGACATGGCAATGCAAGTGCATGGCGCTGCTGGCTTGTCATCCGACACTTGTCTGGCTCATCTATGGGCCACGGCAAGAACACTGAGAATAGCAGATGGTCCAGATGAAGTCCACTTGGGTACTATTGCCAAGTTAGAACTTCAGAGAGCTAAACTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003995 GO:0005488 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016042 GO:0016049 GO:0016054 GO:0016491 GO:0016627 GO:0019395 GO:0019752 GO:0021700 GO:0022622 GO:0030154 GO:0030258 GO:0032501 GO:0032502 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0040007 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0046395 GO:0048037 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050660 GO:0050662 GO:0055114 GO:0060560 GO:0071695 GO:0071704 GO:0072329 GO:0080147 GO:0090558 GO:0090627 GO:0097159 GO:0099402 GO:1901265 GO:1901363 GO:1901575 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00071 ko00280 ko00410 ko00640 ko01100 ko01110 ko01130 ko01200 ko01212 ko03320 map00071 map00280 map00410 map00640 map01100 map01110 map01130 map01200 map01212 map03320

Pfam Domains

Protein Families

APH Acyl-CoA_dh_1 Acyl-CoA_dh_M Acyl-CoA_dh_N

Protein Analysis

819

Amino Acids

91.01

Weight (kDa)

8.74

Isoelectric Point (pI)

41.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003931)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06810
fragaria_vesca	FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700
malus_domestica	MD13G1164300.v1.1 MD16G1164100.v1.1
prunus_persica	Prupe.1G131800_v2.0.a1 Prupe.1G131800_v2.0.a1 Prupe.1G131800_v2.0.a1
pyrus_communis	pycom13g14030 pycom16g13880 pycom16g13890
rosa_chinensis	RchiOBHm_Chr3g0480631 RchiOBHm_Chr4g0423401 RchiOBHm_Chr6g0311831
rosa_laevigata	RLG00000007561
rosa_multiflora	Rmu_sc0002752.1_g000004 Rmu_ssc0000174.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365600
rosa_rugosa	Rorug04G0187300
rosa_samantha	Rh1BG304700 Rh3AG236600 Rh3DG262000 Rh4AG246200 Rh4AG246300 Rh4BG251700 Rh4CG260200 Rh4DG247100
rosa_wichuraiana	Rw4G021160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	502, 1454
AccB1I	GGYRCC	1 cut(s)	486
AccI	GTMKAC	3 cut(s)	734, 1289, 2011
AccII	CGCG	2 cut(s)	492, 945
AciI	CCGC	4 cut(s)	194, 490, 945, 1579
AclWI	GGATC	5 cut(s)	12, 708, 989, 1763, 1776
AcoI	YGGCCR	1 cut(s)	899
AcsI	RAATTY	2 cut(s)	1061, 1268
AcuI	CTGAAG	4 cut(s)	230, 615, 981, 2423
AcyI	GRCGYC	2 cut(s)	158, 487
AfaI	GTAC	7 cut(s)	259, 301, 767, 1872, 1935, 1950, 2419
AfiI	CCNNNNNNNGG	7 cut(s)	421, 1103, 1200, 1299, 1315, 1556, 2281
AflIII	ACRYGT	1 cut(s)	1951
AgsI	TTSAA	8 cut(s)	623, 803, 1132, 1170, 1473, 1537, 1607, 1813
AjiI	CACGTC	1 cut(s)	1988
AjnI	CCWGG	5 cut(s)	237, 1236, 1388, 1864, 2020
AloI	GAACNNNNNNTCC	2 cut(s)	902, 934
Alw21I	GWGCWC	1 cut(s)	1549
Alw26I	GTCTC	4 cut(s)	103, 855, 1876, 2038
Alw44I	GTGCAC	1 cut(s)	1545
AlwI	GGATC	5 cut(s)	12, 708, 989, 1763, 1776
AlwNI	CAGNNNCTG	1 cut(s)	638
Ama87I	CYCGRG	1 cut(s)	2241
AoxI	GGCC	6 cut(s)	33, 899, 1351, 1392, 2017, 2364
ApaLI	GTGCAC	1 cut(s)	1545
ApoI	RAATTY	2 cut(s)	1061, 1268
Asp700I	GAANNNNTTC	2 cut(s)	843, 1611
AspLEI	GCGC	7 cut(s)	489, 1013, 1109, 1463, 1763, 2287, 2324
AspS9I	GGNCC	5 cut(s)	790, 1392, 2018, 2364, 2396
AsuC2I	CCSGG	2 cut(s)	381, 1194
AsuHPI	GGTGA	3 cut(s)	157, 563, 821
AsuNHI	GCTAGC	1 cut(s)	1336
AvaI	CYCGRG	1 cut(s)	2241
AvaII	GGWCC	2 cut(s)	790, 2396
AxyI	CCTNAGG	1 cut(s)	282
BaeGI	GKGCMC	2 cut(s)	409, 1549
BalI	TGGCCA	1 cut(s)	901
BamHI	GGATCC	1 cut(s)	1768
BanI	GGYRCC	1 cut(s)	486
BanII	GRGCYC	3 cut(s)	1525, 2095, 2138
Bbv12I	GWGCWC	1 cut(s)	1549
BccI	CCATC	8 cut(s)	910, 972, 1108, 1317, 1406, 2044, 2284, 2387
BceAI	ACGGC	4 cut(s)	206, 438, 524, 2385
BcgI	CGANNNNNNTGC	4 cut(s)	346, 380, 1796, 1830
BciT130I	CCWGG	5 cut(s)	239, 1238, 1390, 1866, 2022
BciVI	GTATCC	1 cut(s)	1362
BclI	TGATCA	1 cut(s)	2209
BcnI	CCSGG	2 cut(s)	381, 1194
BcoDI	GTCTC	4 cut(s)	103, 855, 1876, 2038
BfaI	CTAG	6 cut(s)	473, 1337, 1665, 1976, 2015, 2174
BfmI	CTRYAG	1 cut(s)	639
BfoI	RGCGCY	6 cut(s)	490, 1014, 1110, 1764, 2288, 2325
BfuAI	ACCTGC	2 cut(s)	502, 1454
BfuI	GTATCC	1 cut(s)	1362
BglII	AGATCT	1 cut(s)	1136
BlpI	GCTNAGC	1 cut(s)	2061
BmcAI	AGTACT	1 cut(s)	1935
Bme1390I	CCNGG	7 cut(s)	239, 381, 1194, 1238, 1390, 1866, 2022
Bme18I	GGWCC	2 cut(s)	790, 2396
BmeT110I	CYCGRG	1 cut(s)	2241
BmgBI	CACGTC	1 cut(s)	1988
BmgT120I	GGNCC	5 cut(s)	790, 1392, 2018, 2364, 2396
BmiI	GGNNCC	7 cut(s)	273, 279, 488, 834, 1524, 1662, 1770
BmrFI	CCNGG	7 cut(s)	239, 381, 1194, 1238, 1390, 1866, 2022
BmrI	ACTGGG	2 cut(s)	733, 837
BmsI	GCATC	7 cut(s)	446, 451, 959, 1102, 1672, 1682, 1900
BmtI	GCTAGC	1 cut(s)	1340
BmuI	ACTGGG	2 cut(s)	733, 837
BoxI	GACNNNNGTC	1 cut(s)	2346
BplI	GAGNNNNNCTC	3 cut(s)	1277, 1309, 2436
BpmI	CTGGAG	3 cut(s)	161, 1848, 2219
Bpu1102I	GCTNAGC	1 cut(s)	2061
BpuEI	CTTGAG	3 cut(s)	14, 1104, 1646
BpuMI	CCSGG	2 cut(s)	381, 1194
BsaAI	YACGTR	1 cut(s)	1952
BsaHI	GRCGYC	2 cut(s)	158, 487
BsaI	GGTCTC	1 cut(s)	1876
BsaJI	CCNNGG	9 cut(s)	793, 896, 1192, 1257, 1389, 1772, 2020, 2242, 2367
BsaWI	WCCGGW	1 cut(s)	274
BsaXI	ACNNNNNCTCC	6 cut(s)	902, 932, 1310, 1340, 1559, 1589
Bsc4I	CCNNNNNNNGG	7 cut(s)	421, 1103, 1200, 1299, 1315, 1556, 2281
Bse1I	ACTGG	5 cut(s)	70, 273, 553, 728, 832
Bse21I	CCTNAGG	1 cut(s)	282
Bse3DI	GCAATG	4 cut(s)	1659, 2035, 2262, 2313
BseBI	CCWGG	5 cut(s)	239, 1238, 1390, 1866, 2022
BseDI	CCNNGG	9 cut(s)	793, 896, 1192, 1257, 1389, 1772, 2020, 2242, 2367
BseGI	GGATG	6 cut(s)	437, 688, 1093, 1309, 1673, 2336
BseLI	CCNNNNNNNGG	7 cut(s)	421, 1103, 1200, 1299, 1315, 1556, 2281
BseMI	GCAATG	4 cut(s)	1659, 2035, 2262, 2313
BseMII	CTCAG	5 cut(s)	384, 866, 1275, 2052, 2372
BseNI	ACTGG	5 cut(s)	70, 273, 553, 728, 832
BseRI	GAGGAG	4 cut(s)	415, 1017, 1331, 1334
BseSI	GKGCMC	2 cut(s)	409, 1549
BseYI	CCCAGC	2 cut(s)	1014, 1957
BsgI	GTGCAG	1 cut(s)	1798
Bsh1236I	CGCG	2 cut(s)	492, 945
Bsh1285I	CGRYCG	1 cut(s)	1450
BshFI	GGCC	6 cut(s)	35, 901, 1353, 1394, 2019, 2366
BshNI	GGYRCC	1 cut(s)	486
BsiEI	CGRYCG	1 cut(s)	1450
BsiHKAI	GWGCWC	1 cut(s)	1549
BsiHKCI	CYCGRG	1 cut(s)	2241
BsiSI	CCGG	3 cut(s)	275, 380, 1194
BslFI	GGGAC	3 cut(s)	674, 1175, 1940
BslI	CCNNNNNNNGG	7 cut(s)	421, 1103, 1200, 1299, 1315, 1556, 2281
BsmAI	GTCTC	4 cut(s)	103, 855, 1876, 2038
BsmBI	CGTCTC	1 cut(s)	855
BsmFI	GGGAC	3 cut(s)	674, 1175, 1940
BsmI	GAATGC	1 cut(s)	714
BsnI	GGCC	6 cut(s)	35, 901, 1353, 1394, 2019, 2366
Bso31I	GGTCTC	1 cut(s)	1876
BsoBI	CYCGRG	1 cut(s)	2241
Bsp1286I	GDGCHC	5 cut(s)	409, 1525, 1549, 2095, 2138
Bsp1407I	TGTACA	1 cut(s)	1870
Bsp1720I	GCTNAGC	1 cut(s)	2061
Bsp19I	CCATGG	2 cut(s)	896, 1257
BspACI	CCGC	4 cut(s)	194, 490, 945, 1579
BspANI	GGCC	6 cut(s)	35, 901, 1353, 1394, 2019, 2366
BspCNI	CTCAG	5 cut(s)	385, 865, 1276, 2053, 2373
BspFNI	CGCG	2 cut(s)	492, 945
BspLI	GGNNCC	7 cut(s)	273, 279, 488, 834, 1524, 1662, 1770
BspMAI	CTGCAG	1 cut(s)	643
BspMI	ACCTGC	2 cut(s)	502, 1454
BspOI	GCTAGC	1 cut(s)	1340
BspPI	GGATC	5 cut(s)	12, 708, 989, 1763, 1776
BspQI	GCTCTTC	1 cut(s)	886
BspT107I	GGYRCC	1 cut(s)	486
BspTNI	GGTCTC	1 cut(s)	1876
BsrDI	GCAATG	4 cut(s)	1659, 2035, 2262, 2313
BsrGI	TGTACA	1 cut(s)	1870
BsrI	ACTGG	5 cut(s)	70, 273, 553, 728, 832
BssECI	CCNNGG	9 cut(s)	793, 896, 1192, 1257, 1389, 1772, 2020, 2242, 2367
BssNI	GRCGYC	2 cut(s)	158, 487
BssT1I	CCWWGG	3 cut(s)	793, 896, 1257
Bst2UI	CCWGG	5 cut(s)	239, 1238, 1390, 1866, 2022
Bst4CI	ACNGT	4 cut(s)	97, 861, 1306, 1894
Bst6I	CTCTTC	2 cut(s)	392, 886
BstACI	GRCGYC	2 cut(s)	158, 487
BstAUI	TGTACA	1 cut(s)	1870
BstBAI	YACGTR	1 cut(s)	1952
BstC8I	GCNNGC	8 cut(s)	192, 560, 646, 1020, 1338, 1926, 2072, 2329
BstDEI	CTNAG	9 cut(s)	282, 393, 649, 852, 1284, 1846, 2061, 2096, 2381
BstDSI	CCRYGG	3 cut(s)	896, 1257, 2367
BstENI	CCTNNNNNAGG	1 cut(s)	1101
BstF5I	GGATG	6 cut(s)	437, 688, 1093, 1309, 1673, 2336
BstFNI	CGCG	2 cut(s)	492, 945
BstH2I	RGCGCY	6 cut(s)	490, 1014, 1110, 1764, 2288, 2325
BstHHI	GCGC	7 cut(s)	489, 1013, 1109, 1463, 1763, 2287, 2324
BstMAI	GTCTC	4 cut(s)	103, 855, 1876, 2038
BstMCI	CGRYCG	1 cut(s)	1450
BstNI	CCWGG	5 cut(s)	239, 1238, 1390, 1866, 2022
BstNSI	RCATGY	3 cut(s)	1022, 1928, 2074
BstPAI	GACNNNNGTC	1 cut(s)	2346
BstSCI	CCNGG	7 cut(s)	237, 379, 1192, 1236, 1388, 1864, 2020
BstSFI	CTRYAG	1 cut(s)	639
BstSLI	GKGCMC	2 cut(s)	409, 1549
BstUI	CGCG	2 cut(s)	492, 945
BstX2I	RGATCY	2 cut(s)	1136, 1768
BstXI	CCANNNNNNTGG	1 cut(s)	2191
BstYI	RGATCY	2 cut(s)	1136, 1768
Bsu36I	CCTNAGG	1 cut(s)	282
BsuI	GTATCC	1 cut(s)	1362
BsuRI	GGCC	6 cut(s)	35, 901, 1353, 1394, 2019, 2366
BtgI	CCRYGG	3 cut(s)	896, 1257, 2367
BtrI	CACGTC	1 cut(s)	1988
BtsCI	GGATG	6 cut(s)	437, 688, 1093, 1309, 1673, 2336
BtsIMutI	CAGTG	3 cut(s)	63, 266, 2378
BveI	ACCTGC	2 cut(s)	502, 1454
Cac8I	GCNNGC	8 cut(s)	192, 560, 646, 1020, 1338, 1926, 2072, 2329
CaiI	CAGNNNCTG	1 cut(s)	638
CfoI	GCGC	7 cut(s)	489, 1013, 1109, 1463, 1763, 2287, 2324
Cfr13I	GGNCC	5 cut(s)	790, 1392, 2018, 2364, 2396
CseI	GACGC	2 cut(s)	147, 363
Csp6I	GTAC	7 cut(s)	258, 300, 766, 1871, 1934, 1949, 2418
CviQI	GTAC	7 cut(s)	258, 300, 766, 1871, 1934, 1949, 2418
DdeI	CTNAG	9 cut(s)	282, 393, 649, 852, 1284, 1846, 2061, 2096, 2381
DinI	GGCGCC	1 cut(s)	488
EaeI	YGGCCR	1 cut(s)	899
Eam1104I	CTCTTC	2 cut(s)	392, 886
EarI	CTCTTC	2 cut(s)	392, 886
Eco130I	CCWWGG	3 cut(s)	793, 896, 1257
Eco147I	AGGCCT	2 cut(s)	35, 1353
Eco24I	GRGCYC	3 cut(s)	1525, 2095, 2138
Eco31I	GGTCTC	1 cut(s)	1876
Eco32I	GATATC	2 cut(s)	1490, 1855
Eco47I	GGWCC	2 cut(s)	790, 2396
Eco57I	CTGAAG	4 cut(s)	230, 615, 981, 2423
Eco81I	CCTNAGG	1 cut(s)	282
Eco88I	CYCGRG	1 cut(s)	2241
EcoNI	CCTNNNNNAGG	1 cut(s)	1101
EcoRI	GAATTC	1 cut(s)	1268
EcoRII	CCWGG	5 cut(s)	237, 1236, 1388, 1864, 2020
EcoRV	GATATC	2 cut(s)	1490, 1855
EcoT14I	CCWWGG	3 cut(s)	793, 896, 1257
EcoT22I	ATGCAT	1 cut(s)	1827
EcoT38I	GRGCYC	3 cut(s)	1525, 2095, 2138
EgeI	GGCGCC	1 cut(s)	488
EheI	GGCGCC	1 cut(s)	488
ErhI	CCWWGG	3 cut(s)	793, 896, 1257
Esp3I	CGTCTC	1 cut(s)	855
FaqI	GGGAC	3 cut(s)	674, 1175, 1940
FauI	CCCGC	1 cut(s)	187
FbaI	TGATCA	1 cut(s)	2209
FblI	GTMKAC	3 cut(s)	734, 1289, 2011
FokI	GGATG	6 cut(s)	424, 675, 1080, 1296, 1660, 2323
FriOI	GRGCYC	3 cut(s)	1525, 2095, 2138
FspBI	CTAG	6 cut(s)	473, 1337, 1665, 1976, 2015, 2174
GlaI	GCGC	7 cut(s)	488, 1012, 1108, 1462, 1762, 2286, 2323
GsaI	CCCAGC	2 cut(s)	1018, 1961
GsuI	CTGGAG	3 cut(s)	161, 1848, 2219
HaeII	RGCGCY	6 cut(s)	490, 1014, 1110, 1764, 2288, 2325
HaeIII	GGCC	6 cut(s)	35, 901, 1353, 1394, 2019, 2366
HapII	CCGG	3 cut(s)	275, 380, 1194
HgaI	GACGC	2 cut(s)	147, 363
HhaI	GCGC	7 cut(s)	489, 1013, 1109, 1463, 1763, 2287, 2324
Hin1I	GRCGYC	2 cut(s)	158, 487
Hin6I	GCGC	7 cut(s)	487, 1011, 1107, 1461, 1761, 2285, 2322
HinP1I	GCGC	7 cut(s)	487, 1011, 1107, 1461, 1761, 2285, 2322
HindIII	AAGCTT	1 cut(s)	429
HinfI	GANTC	8 cut(s)	571, 626, 705, 844, 1076, 1286, 1647, 1721
HpaII	CCGG	3 cut(s)	275, 380, 1194
HphI	GGTGA	3 cut(s)	157, 563, 821
Hpy188I	TCNGA	8 cut(s)	910, 1435, 1681, 1773, 2149, 2341, 2442, 2456
Hpy99I	CGWCG	3 cut(s)	133, 163, 227
HpyAV	CCTTC	6 cut(s)	344, 806, 833, 1343, 1976, 2019
HpyCH4III	ACNGT	4 cut(s)	97, 861, 1306, 1894
HpyCH4IV	ACGT	7 cut(s)	60, 131, 174, 786, 1297, 1951, 1987
HpyF3I	CTNAG	9 cut(s)	282, 393, 649, 852, 1284, 1846, 2061, 2096, 2381
HpySE526I	ACGT	7 cut(s)	60, 131, 174, 786, 1297, 1951, 1987
Hsp92I	GRCGYC	2 cut(s)	158, 487
HspAI	GCGC	7 cut(s)	487, 1011, 1107, 1461, 1761, 2285, 2322
KasI	GGCGCC	1 cut(s)	486
Ksp22I	TGATCA	1 cut(s)	2209
LguI	GCTCTTC	1 cut(s)	886
LmnI	GCTCC	7 cut(s)	210, 635, 947, 1333, 1528, 1587, 2054
LweI	GCATC	7 cut(s)	446, 451, 959, 1102, 1672, 1682, 1900
MaeI	CTAG	6 cut(s)	473, 1337, 1665, 1976, 2015, 2174
MaeII	ACGT	7 cut(s)	60, 131, 174, 786, 1297, 1951, 1987
MaeIII	GTNAC	3 cut(s)	61, 385, 600
MfeI	CAATTG	1 cut(s)	1537
MflI	RGATCY	2 cut(s)	1136, 1768
MhlI	GDGCHC	5 cut(s)	409, 1525, 1549, 2095, 2138
MlsI	TGGCCA	1 cut(s)	901
MluCI	AATT	9 cut(s)	88, 728, 954, 1036, 1061, 1211, 1268, 1400, 1537
MluNI	TGGCCA	1 cut(s)	901
Mly113I	GGCGCC	1 cut(s)	487
MlyI	GAGTC	2 cut(s)	714, 1295
MmeI	TCCRAC	2 cut(s)	1280, 2364
Mox20I	TGGCCA	1 cut(s)	901
Mph1103I	ATGCAT	1 cut(s)	1827
MroXI	GAANNNNTTC	2 cut(s)	843, 1611
MscI	TGGCCA	1 cut(s)	901
MseI	TTAA	3 cut(s)	1229, 1328, 1707
MslI	CAYNNNNRTG	2 cut(s)	1923, 2306
Msp20I	TGGCCA	1 cut(s)	901
MspA1I	CMGCKG	2 cut(s)	644, 2207
MspI	CCGG	3 cut(s)	275, 380, 1194
MspR9I	CCNGG	7 cut(s)	239, 381, 1194, 1238, 1390, 1866, 2022
MunI	CAATTG	1 cut(s)	1537
Mva1269I	GAATGC	1 cut(s)	714
MvaI	CCWGG	5 cut(s)	239, 1238, 1390, 1866, 2022
MvnI	CGCG	2 cut(s)	492, 945
NarI	GGCGCC	1 cut(s)	487
NciI	CCSGG	2 cut(s)	381, 1194
NcoI	CCATGG	2 cut(s)	896, 1257
NheI	GCTAGC	1 cut(s)	1336
NlaIV	GGNNCC	7 cut(s)	273, 279, 488, 834, 1524, 1662, 1770
NmuCI	GTSAC	1 cut(s)	61
NsiI	ATGCAT	1 cut(s)	1827
NspI	RCATGY	3 cut(s)	1022, 1928, 2074
PaeI	GCATGC	3 cut(s)	1022, 1928, 2074
PceI	AGGCCT	2 cut(s)	35, 1353
PciSI	GCTCTTC	1 cut(s)	886
PcsI	WCGNNNNNNNCGW	1 cut(s)	128
PctI	GAATGC	1 cut(s)	714
PdmI	GAANNNNTTC	2 cut(s)	843, 1611
PfeI	GAWTC	6 cut(s)	571, 626, 844, 1076, 1647, 1721
PfoI	TCCNGGA	1 cut(s)	1236
Ple19I	CGATCG	1 cut(s)	1450
PleI	GAGTC	2 cut(s)	713, 1294
PluTI	GGCGCC	1 cut(s)	490
PpsI	GAGTC	2 cut(s)	713, 1294
Ppu21I	YACGTR	1 cut(s)	1952
PshAI	GACNNNNGTC	1 cut(s)	2346
Psp6I	CCWGG	5 cut(s)	237, 1236, 1388, 1864, 2020
PspFI	CCCAGC	2 cut(s)	1014, 1957
PspGI	CCWGG	5 cut(s)	237, 1236, 1388, 1864, 2020
PspN4I	GGNNCC	7 cut(s)	273, 279, 488, 834, 1524, 1662, 1770
PspPI	GGNCC	5 cut(s)	790, 1392, 2018, 2364, 2396
PstI	CTGCAG	1 cut(s)	643
PstNI	CAGNNNCTG	1 cut(s)	638
PsuI	RGATCY	2 cut(s)	1136, 1768
PvuI	CGATCG	1 cut(s)	1450
PvuII	CAGCTG	2 cut(s)	644, 2207
RsaI	GTAC	7 cut(s)	259, 301, 767, 1872, 1935, 1950, 2419
RsaNI	GTAC	7 cut(s)	258, 300, 766, 1871, 1934, 1949, 2418
RseI	CAYNNNNRTG	2 cut(s)	1923, 2306
SapI	GCTCTTC	1 cut(s)	886
SaqAI	TTAA	3 cut(s)	1229, 1328, 1707
Sau96I	GGNCC	5 cut(s)	790, 1392, 2018, 2364, 2396
ScaI	AGTACT	1 cut(s)	1935
SchI	GAGTC	2 cut(s)	714, 1295
ScrFI	CCNGG	7 cut(s)	239, 381, 1194, 1238, 1390, 1866, 2022
SduI	GDGCHC	5 cut(s)	409, 1525, 1549, 2095, 2138
SfaNI	GCATC	7 cut(s)	446, 451, 959, 1102, 1672, 1682, 1900
SfcI	CTRYAG	1 cut(s)	639
SfoI	GGCGCC	1 cut(s)	488
SinI	GGWCC	2 cut(s)	790, 2396
SmiMI	CAYNNNNRTG	2 cut(s)	1923, 2306
SmlI	CTYRAG	3 cut(s)	29, 1119, 1625
SmoI	CTYRAG	3 cut(s)	29, 1119, 1625
SphI	GCATGC	3 cut(s)	1022, 1928, 2074
Sse9I	AATT	9 cut(s)	88, 728, 954, 1036, 1061, 1211, 1268, 1400, 1537
SseBI	AGGCCT	2 cut(s)	35, 1353
SsiI	CCGC	4 cut(s)	194, 490, 945, 1579
SspDI	GGCGCC	1 cut(s)	486
SspI	AATATT	1 cut(s)	1969
SspMI	CTAG	6 cut(s)	473, 1337, 1665, 1976, 2015, 2174
StuI	AGGCCT	2 cut(s)	35, 1353
StyD4I	CCNGG	7 cut(s)	237, 379, 1192, 1236, 1388, 1864, 2020
StyI	CCWWGG	3 cut(s)	793, 896, 1257
TaaI	ACNGT	4 cut(s)	97, 861, 1306, 1894
TaiI	ACGT	7 cut(s)	63, 134, 177, 789, 1300, 1954, 1990
TasI	AATT	9 cut(s)	88, 728, 954, 1036, 1061, 1211, 1268, 1400, 1537
TatI	WGTACW	2 cut(s)	1870, 1933
TauI	GCSGC	1 cut(s)	492
TfiI	GAWTC	6 cut(s)	571, 626, 844, 1076, 1647, 1721
Tru1I	TTAA	3 cut(s)	1229, 1328, 1707
Tru9I	TTAA	3 cut(s)	1229, 1328, 1707
TscAI	CASTG	3 cut(s)	70, 273, 2385
TseFI	GTSAC	1 cut(s)	61
Tsp45I	GTSAC	1 cut(s)	61
TspDTI	ATGAA	6 cut(s)	644, 677, 873, 1030, 1713, 2418
TspGWI	ACGGA	2 cut(s)	837, 1673
TspRI	CASTG	3 cut(s)	70, 273, 2385
VneI	GTGCAC	1 cut(s)	1545
VpaK11BI	GGWCC	2 cut(s)	790, 2396
XagI	CCTNNNNNAGG	1 cut(s)	1101
XapI	RAATTY	2 cut(s)	1061, 1268
XceI	RCATGY	3 cut(s)	1022, 1928, 2074
XcmI	CCANNNNNNNNNTGG	1 cut(s)	909
XmiI	GTMKAC	3 cut(s)	734, 1289, 2011
XmnI	GAANNNNTTC	2 cut(s)	843, 1611
XspI	CTAG	6 cut(s)	473, 1337, 1665, 1976, 2015, 2174
ZrmI	AGTACT	1 cut(s)	1935
Zsp2I	ATGCAT	1 cut(s)	1827

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.