Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0003931

Physical Location & Seq

Genomic Coordinates Reverse (-)

22554655 .. 22560634

Gene Structure 5980 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g18700.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGGCGGCTAACGACCTCGACCTCGACGCCTTGCTCCGTTACGCCGCCGCTAACGTCCCCGCCTTCCCTCCCTCGCCGTCCAATTTCACCGTCTCCAAGTTCGGCCATGGACAATCGAATCCGACTTATCTGATGCAAGTCGGATTCGGAGCGGCGGTGAAACGCTACGTTTTGAGAAAGAAGCCTCCGGGGAAGCTGCTCCAGTCTGCTCACGCCGTCGAGAGAGAATTCCAGGTGCTTCAAGCGTTGAGTAATCACACGCTGGTTCCGGTTCCGAAAGTCTTCTGTTTGTGTACTGATCCCAGTGTGATTGGAACGTCTTTTTACATCATGGAGTTTCTGGAAGGCCGCATTTTCGTTGACCCGAGGCTACCGGGCGTGGAGCCTGCGAGCAGGAGGGCTATTTACCAAGCAACTGCGAAAGTTTTAGCGTCTCTGCATTCCGCTGATTTTGATGCCATTGGTCTAGGAAAGTATGGGCGCCGTGAAAACTATTGTAAACGGCAGGTAGAGAGGTGGGCGAAACAATATATTGCCTCCACTGGTGAAGGCAAGCCTGAGAGAAATCCAAAGATGTTTGAGCTAATTGATTGGTTACAGCAGCATATTCCTCTTGAAGATTCTTCAGGAGGTGCAACCGGCTTAGTTCATGGGGACTTTCGCCTCGATAATCTTGTGTTTCATCCTATTGAGGATCGAGTGATTGGCATTCTTGACTGGGAATTGTCTACTCTTGGAAACCAAATGTGTGATGTTGCTTACTGCTCCATGCCTTATATCACGGACCTTGGGGCTGACAAAGATCATCTTGGTAAAGGTATGGAACATACTGGGCTTCCAGAAGGGATTCCTTCTCTGGCAGAATATGTGGCAGAATACTGCTCGTCATCTGGAAAGCCATGGCCTTTTGCTGAGTGGAAGTTTTATATAGCATTTTCTTTATTCCGTGGTGCATCAATATATGCTGGCATTTATAGTAGATGGACCATGGGTAATGCTTCAGGAGGTGAGAGTGCCCGGCATGCAGGTGACAAAGCTAATTTTCTTATAGACAACGCATGGGAACTTGTTAGACGAGAATCTGTGCTTCCTGAGCATCCTCCATCAGGTTCTTTTGTTGCTCAGGACTACTTCAAAGGGTTGGCACGAGAGAGTGAAGATCAAGGATTTTTAAAAGGGGAAGGGAAGTTTGTCCCCAGTAAAAGCATTCTGGAATTGAGAAACAGGTTGGTCAAGTTCATGGAAGATCACATATATCCCATGGAAAAAGAATTCTATGAACTTTCTGAGTCTACCTCGCGTTGGACAGTGCATCCTGAGGAGGAGAAGTTAAAGGAGCTAGCCAAGAAAGAAGGCCTATGGAACTTATTTATACCTATTGATAGTGCTGCCAGGGCAAAAAAAATAATTTTTGATGGGACTAATCAGCTTCAGTCAGATGATACCTACAATCAGTTATTGGGCGCGGGTCTTTCAAACCTTGAATATGGATATCTTTGTGAGATCATGGGTCGTTCTGTTTGGGCTCCACAAGTGTTCAACTGTGGTGCACCTGATACCGGAAATATGGAGGTCTTGTTGCGTTATGGGAACAAAGAACAACTGCTTGAATGGCTTATTCCTTTACTTGAGGGGAGAATTAGGTCAGGATTCGCAATGACAGAGCCCAAAGTTGCATCCTCTGATGCAACTAACATCGAATGTTCTATTAGTAGACAAGGAGATTCATATATTATCAATGGAACAAAATGGTGGACAAGTGGGGCTATGGATCCAAGATGTAGACTTCTTATAGTCATGGGAAAAACCGACTTCAGTGCTGCCATGCATAAGCAGCAGTCTATGATCTTAGTGGATATCCGGACTCCAGGTGTACACATTAAGAGACCACTTACAGTTTTTGGCTATGATGATGCACCTCATGGGCATGCAGAAGTTTTATTTGACAATGTACGCGTCCCAGCTAAGAATATACTACTGGGAGAGGGACGTGGGTTTGAGATTGCACAGGGTAGGTTAGGCCCAGGAAGGTTACACCATTGCATGAGACTGATAGGAGCTGCCGAACGAGGCATGCAGATAATGGCCGAAAGGGCTCTTAGTAGAACGGTTTTTAGGAAGTTGATTGCTGAACAAGGCTCTTTTCGTTCTGATATAGCAAAGTGTCGAATAGAGCTAGAGAAAACCAGATTGTTGGTTCTGGATGCAGCTGACCAGCTTGATAGACTTGGAAACAAAAAGGCCCGCGGAGCTCTAGCAATGGCAAAGGTAGCAGCCCCAAACATGGCTCTAATGGTGCTGGACATGGCAATGCAAGTCCATGGCGGCGCTGGCTTGTCTTCTGACACTTGTCTGGCTCATCTTTGGGCCACGGCAAGAACCTTGAGAATAGCAGATGGTCCAGATGAAGTTCACTTGGGTACCATTGCCAAGTTAGAACTACAGAGAGCTAAAGCTAAACTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003995 GO:0005488 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016042 GO:0016049 GO:0016054 GO:0016491 GO:0016627 GO:0019395 GO:0019752 GO:0021700 GO:0022622 GO:0030154 GO:0030258 GO:0032501 GO:0032502 GO:0032787 GO:0033539 GO:0034440 GO:0036094 GO:0040007 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0046395 GO:0048037 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050660 GO:0050662 GO:0055114 GO:0060560 GO:0071695 GO:0071704 GO:0072329 GO:0080147 GO:0090558 GO:0090627 GO:0097159 GO:0099402 GO:1901265 GO:1901363 GO:1901575 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00071 ko00280 ko00410 ko00640 ko01100 ko01110 ko01130 ko01200 ko01212 ko03320 map00071 map00280 map00410 map00640 map01100 map01110 map01130 map01200 map01212 map03320

Pfam Domains

Protein Families

APH Acyl-CoA_dh_1 Acyl-CoA_dh_M Acyl-CoA_dh_N

Protein Analysis

822

Amino Acids

91.2

Weight (kDa)

7.08

Isoelectric Point (pI)

40.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APH	PF01636	3 - 70	8.3e-14	Phosphotransferase enzyme family
Acyl-CoA_dh_M	PF02770	359 - 460	1.7e-18	Acyl-CoA dehydrogenase, middle domain
Acyl-CoA_dh_1	PF00441	472 - 620	2.1e-34	Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_2	PF08028	488 - 598	9.7e-07	Acyl-CoA dehydrogenase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003931)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06810
fragaria_vesca	FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700
malus_domestica	MD13G1164300.v1.1 MD16G1164100.v1.1
prunus_persica	Prupe.1G131800_v2.0.a1 Prupe.1G131800_v2.0.a1 Prupe.1G131800_v2.0.a1
pyrus_communis	pycom13g14030 pycom16g13880 pycom16g13890
rosa_chinensis	RchiOBHm_Chr3g0480631 RchiOBHm_Chr4g0423401 RchiOBHm_Chr6g0311831
rosa_laevigata	RLG00000007561
rosa_multiflora	Rmu_sc0002752.1_g000004 Rmu_ssc0000174.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365600
rosa_rugosa	Rorug04G0187300
rosa_samantha	Rh1BG304700 Rh3AG236600 Rh3DG262000 Rh4AG246200 Rh4AG246300 Rh4BG251700 Rh4CG260200 Rh4DG247100
rosa_wichuraiana	Rw4G021160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1016
Acc36I	ACCTGC	2 cut(s)	496, 1016
Acc65I	GGTACC	1 cut(s)	2420
AccB1I	GGYRCC	2 cut(s)	480, 2420
AccBSI	CCGCTC	1 cut(s)	152
AccI	GTMKAC	4 cut(s)	728, 1292, 1714, 1783
AccII	CGCG	4 cut(s)	1300, 1466, 1956, 2247
AccIII	TCCGGA	1 cut(s)	1860
AclWI	GGATC	4 cut(s)	293, 702, 1766, 1779
AcoI	YGGCCR	2 cut(s)	103, 2085
AcsI	RAATTY	2 cut(s)	227, 1271
AcuI	CTGAAG	4 cut(s)	609, 984, 1415, 1798
AcyI	GRCGYC	2 cut(s)	27, 481
AfaI	GTAC	4 cut(s)	295, 1875, 1953, 2422
AfiI	CCNNNNNNNGG	4 cut(s)	1106, 1302, 1559, 2284
AflIII	ACRYGT	1 cut(s)	1954
AgsI	TTSAA	7 cut(s)	242, 617, 1135, 1476, 1484, 1540, 1610
AjiI	CACGTC	1 cut(s)	1991
AjnI	CCWGG	4 cut(s)	231, 1391, 1867, 2023
Alw21I	GWGCWC	2 cut(s)	1552, 2254
Alw26I	GTCTC	4 cut(s)	97, 438, 1879, 2041
Alw44I	GTGCAC	1 cut(s)	1548
AlwI	GGATC	4 cut(s)	293, 702, 1766, 1779
Ama87I	CYCGRG	1 cut(s)	364
Aor13HI	TCCGGA	1 cut(s)	1860
AoxI	GGCC	8 cut(s)	103, 346, 902, 1354, 2020, 2085, 2241, 2367
ApaLI	GTGCAC	1 cut(s)	1548
ApeKI	GCWGC	8 cut(s)	196, 601, 1388, 1820, 1834, 2060, 2207, 2273
ApoI	RAATTY	2 cut(s)	227, 1271
Asp700I	GAANNNNTTC	2 cut(s)	281, 846
Asp718I	GGTACC	1 cut(s)	2420
AspLEI	GCGC	3 cut(s)	483, 1466, 2330
AspS9I	GGNCC	6 cut(s)	784, 984, 2021, 2242, 2367, 2399
AsuC2I	CCSGG	3 cut(s)	189, 375, 1018
AsuHPI	GGTGA	5 cut(s)	79, 169, 557, 1019, 1040
AsuNHI	GCTAGC	1 cut(s)	1339
AvaI	CYCGRG	1 cut(s)	364
AvaII	GGWCC	3 cut(s)	784, 984, 2399
AxyI	CCTNAGG	1 cut(s)	1317
BaeGI	GKGCMC	2 cut(s)	1018, 1552
BaeI	ACNNNNGTAYC	2 cut(s)	2404, 2437
BamHI	GGATCC	1 cut(s)	1771
BanI	GGYRCC	2 cut(s)	480, 2420
BanII	GRGCYC	4 cut(s)	1528, 1668, 2098, 2254
BauI	CACGAG	1 cut(s)	1146
BbsI	GAAGAC	2 cut(s)	274, 2331
Bbv12I	GWGCWC	2 cut(s)	1552, 2254
BbvI	GCAGC	8 cut(s)	183, 613, 1375, 1807, 1846, 2047, 2219, 2285
BccI	CCATC	4 cut(s)	975, 1111, 1409, 2390
BceAI	ACGGC	5 cut(s)	61, 200, 468, 518, 2388
BcgI	CGANNNNNNTGC	2 cut(s)	1799, 1833
BciT130I	CCWGG	4 cut(s)	233, 1393, 1869, 2025
BcnI	CCSGG	3 cut(s)	189, 375, 1018
BcoDI	GTCTC	4 cut(s)	97, 438, 1879, 2041
BfaI	CTAG	4 cut(s)	467, 1340, 2177, 2255
BfmI	CTRYAG	1 cut(s)	2441
BfoI	RGCGCY	2 cut(s)	484, 2331
BfuAI	ACCTGC	2 cut(s)	496, 1016
BglI	GCCNNNNNGGC	1 cut(s)	2093
Bme1390I	CCNGG	7 cut(s)	189, 233, 375, 1018, 1393, 1869, 2025
Bme18I	GGWCC	3 cut(s)	784, 984, 2399
BmeT110I	CYCGRG	1 cut(s)	364
BmgBI	CACGTC	1 cut(s)	1991
BmgT120I	GGNCC	6 cut(s)	784, 984, 2021, 2242, 2367, 2399
BmiI	GGNNCC	7 cut(s)	267, 273, 384, 482, 1527, 1773, 2422
BmrFI	CCNGG	7 cut(s)	189, 233, 375, 1018, 1393, 1869, 2025
BmrI	ACTGGG	5 cut(s)	297, 727, 840, 1191, 1988
BmsI	GCATC	9 cut(s)	123, 445, 962, 1105, 1321, 1675, 1685, 1903, 2194
BmtI	GCTAGC	1 cut(s)	1343
BmuI	ACTGGG	5 cut(s)	297, 727, 840, 1191, 1988
BoxI	GACNNNNGTC	1 cut(s)	2349
BpiI	GAAGAC	2 cut(s)	274, 2331
BplI	GAGNNNNNCTC	2 cut(s)	1280, 1312
BpmI	CTGGAG	2 cut(s)	185, 1851
Bpu10I	CCTNAGC	2 cut(s)	1092, 1122
BpuEI	CTTGAG	2 cut(s)	1649, 2404
BpuMI	CCSGG	3 cut(s)	189, 375, 1018
BsaHI	GRCGYC	2 cut(s)	27, 481
BsaI	GGTCTC	1 cut(s)	1879
BsaWI	WCCGGW	3 cut(s)	268, 1559, 1860
BsaXI	ACNNNNNCTCC	6 cut(s)	141, 171, 1313, 1343, 1562, 1592
Bsc4I	CCNNNNNNNGG	4 cut(s)	1106, 1302, 1559, 2284
Bse118I	RCCGGY	1 cut(s)	638
Bse1I	ACTGG	7 cut(s)	202, 303, 547, 722, 835, 1197, 1983
Bse21I	CCTNAGG	1 cut(s)	1317
Bse3DI	GCAATG	5 cut(s)	1662, 2038, 2265, 2316, 2424
BseAI	TCCGGA	1 cut(s)	1860
BseBI	CCWGG	4 cut(s)	233, 1393, 1869, 2025
BseGI	GGATG	5 cut(s)	682, 1096, 1312, 1676, 2209
BseLI	CCNNNNNNNGG	4 cut(s)	1106, 1302, 1559, 2284
BseMI	GCAATG	5 cut(s)	1662, 2038, 2265, 2316, 2424
BseMII	CTCAG	6 cut(s)	549, 903, 1083, 1136, 1278, 1308
BseNI	ACTGG	7 cut(s)	202, 303, 547, 722, 835, 1197, 1983
BseRI	GAGGAG	2 cut(s)	1334, 1337
BseSI	GKGCMC	2 cut(s)	1018, 1552
BseXI	GCAGC	8 cut(s)	183, 613, 1375, 1807, 1846, 2047, 2219, 2285
BseYI	CCCAGC	1 cut(s)	1960
Bsh1236I	CGCG	4 cut(s)	1300, 1466, 1956, 2247
BshFI	GGCC	8 cut(s)	105, 348, 904, 1356, 2022, 2087, 2243, 2369
BshNI	GGYRCC	2 cut(s)	480, 2420
BsiHKAI	GWGCWC	2 cut(s)	1552, 2254
BsiHKCI	CYCGRG	1 cut(s)	364
BsiSI	CCGG	7 cut(s)	188, 269, 374, 639, 1018, 1560, 1861
BslFI	GGGAC	6 cut(s)	41, 668, 1178, 1432, 1943, 2001
BslI	CCNNNNNNNGG	4 cut(s)	1106, 1302, 1559, 2284
BsmAI	GTCTC	4 cut(s)	97, 438, 1879, 2041
BsmBI	CGTCTC	2 cut(s)	97, 438
BsmFI	GGGAC	6 cut(s)	41, 668, 1178, 1432, 1943, 2001
BsmI	GAATGC	3 cut(s)	439, 708, 1206
BsnI	GGCC	8 cut(s)	105, 348, 904, 1356, 2022, 2087, 2243, 2369
Bso31I	GGTCTC	1 cut(s)	1879
BsoBI	CYCGRG	1 cut(s)	364
Bsp1286I	GDGCHC	6 cut(s)	1018, 1528, 1552, 1668, 2098, 2254
Bsp13I	TCCGGA	1 cut(s)	1860
Bsp1407I	TGTACA	1 cut(s)	1873
Bsp143I	GATC	8 cut(s)	298, 694, 802, 1159, 1246, 1503, 1771, 1845
Bsp19I	CCATGG	5 cut(s)	106, 899, 987, 1260, 2320
BspANI	GGCC	8 cut(s)	105, 348, 904, 1356, 2022, 2087, 2243, 2369
BspCNI	CTCAG	6 cut(s)	550, 904, 1084, 1135, 1279, 1309
BspEI	TCCGGA	1 cut(s)	1860
BspFNI	CGCG	4 cut(s)	1300, 1466, 1956, 2247
BspLI	GGNNCC	7 cut(s)	267, 273, 384, 482, 1527, 1773, 2422
BspMI	ACCTGC	2 cut(s)	496, 1016
BspOI	GCTAGC	1 cut(s)	1343
BspPI	GGATC	4 cut(s)	293, 702, 1766, 1779
BspT107I	GGYRCC	2 cut(s)	480, 2420
BspTNI	GGTCTC	1 cut(s)	1879
BsrBI	CCGCTC	1 cut(s)	152
BsrDI	GCAATG	5 cut(s)	1662, 2038, 2265, 2316, 2424
BsrFI	RCCGGY	1 cut(s)	638
BsrGI	TGTACA	1 cut(s)	1873
BsrI	ACTGG	7 cut(s)	202, 303, 547, 722, 835, 1197, 1983
BssAI	RCCGGY	1 cut(s)	638
BssMI	GATC	8 cut(s)	298, 694, 802, 1159, 1246, 1503, 1771, 1845
BssNI	GRCGYC	2 cut(s)	27, 481
BssSI	CACGAG	1 cut(s)	1146
BssT1I	CCWWGG	6 cut(s)	106, 787, 899, 987, 1260, 2320
Bst2BI	CACGAG	1 cut(s)	1146
Bst2UI	CCWGG	4 cut(s)	233, 1393, 1869, 2025
Bst4CI	ACNGT	5 cut(s)	91, 1309, 1544, 1897, 2110
BstACI	GRCGYC	2 cut(s)	27, 481
BstAUI	TGTACA	1 cut(s)	1873
BstDSI	CCRYGG	8 cut(s)	106, 899, 946, 987, 1260, 2245, 2320, 2370
BstENI	CCTNNNNNAGG	1 cut(s)	1104
BstF5I	GGATG	5 cut(s)	682, 1096, 1312, 1676, 2209
BstFNI	CGCG	4 cut(s)	1300, 1466, 1956, 2247
BstH2I	RGCGCY	2 cut(s)	484, 2331
BstHHI	GCGC	3 cut(s)	483, 1466, 2330
BstKTI	GATC	8 cut(s)	301, 697, 805, 1162, 1249, 1506, 1774, 1848
BstMAI	GTCTC	4 cut(s)	97, 438, 1879, 2041
BstMBI	GATC	8 cut(s)	298, 694, 802, 1159, 1246, 1503, 1771, 1845
BstMWI	GCNNNNNNNGC	9 cut(s)	1022, 1093, 1394, 1612, 1834, 2093, 2249, 2270, 2331
BstNI	CCWGG	4 cut(s)	233, 1393, 1869, 2025
BstNSI	RCATGY	3 cut(s)	1025, 1931, 2077
BstPAI	GACNNNNGTC	1 cut(s)	2349
BstSCI	CCNGG	7 cut(s)	187, 231, 373, 1016, 1391, 1867, 2023
BstSFI	CTRYAG	1 cut(s)	2441
BstSLI	GKGCMC	2 cut(s)	1018, 1552
BstUI	CGCG	4 cut(s)	1300, 1466, 1956, 2247
BstV1I	GCAGC	8 cut(s)	183, 613, 1375, 1807, 1846, 2047, 2219, 2285
BstV2I	GAAGAC	2 cut(s)	274, 2331
BstX2I	RGATCY	1 cut(s)	1771
BstXI	CCANNNNNNTGG	1 cut(s)	2194
BstYI	RGATCY	1 cut(s)	1771
Bsu36I	CCTNAGG	1 cut(s)	1317
BsuRI	GGCC	8 cut(s)	105, 348, 904, 1356, 2022, 2087, 2243, 2369
BtgI	CCRYGG	8 cut(s)	106, 899, 946, 987, 1260, 2245, 2320, 2370
BtrI	CACGTC	1 cut(s)	1991
BtsCI	GGATG	5 cut(s)	682, 1096, 1312, 1676, 2209
BtsIMutI	CAGTG	4 cut(s)	310, 540, 1314, 1822
BveI	ACCTGC	2 cut(s)	496, 1016
CfoI	GCGC	3 cut(s)	483, 1466, 2330
Cfr10I	RCCGGY	1 cut(s)	638
Cfr13I	GGNCC	6 cut(s)	784, 984, 2021, 2242, 2367, 2399
Cfr42I	CCGCGG	1 cut(s)	2248
CseI	GACGC	3 cut(s)	35, 420, 1945
Csp6I	GTAC	4 cut(s)	294, 1874, 1952, 2421
CviQI	GTAC	4 cut(s)	294, 1874, 1952, 2421
DinI	GGCGCC	1 cut(s)	482
DpnI	GATC	8 cut(s)	300, 696, 804, 1161, 1248, 1505, 1773, 1847
DpnII	GATC	8 cut(s)	298, 694, 802, 1159, 1246, 1503, 1771, 1845
DraI	TTTAAA	1 cut(s)	1173
EaeI	YGGCCR	2 cut(s)	103, 2085
Ecl136II	GAGCTC	1 cut(s)	2252
Eco130I	CCWWGG	6 cut(s)	106, 787, 899, 987, 1260, 2320
Eco147I	AGGCCT	1 cut(s)	1356
Eco24I	GRGCYC	4 cut(s)	1528, 1668, 2098, 2254
Eco31I	GGTCTC	1 cut(s)	1879
Eco32I	GATATC	2 cut(s)	1493, 1858
Eco47I	GGWCC	3 cut(s)	784, 984, 2399
Eco53kI	GAGCTC	1 cut(s)	2252
Eco57I	CTGAAG	4 cut(s)	609, 984, 1415, 1798
Eco81I	CCTNAGG	1 cut(s)	1317
Eco88I	CYCGRG	1 cut(s)	364
EcoICRI	GAGCTC	1 cut(s)	2252
EcoNI	CCTNNNNNAGG	1 cut(s)	1104
EcoRI	GAATTC	2 cut(s)	227, 1271
EcoRII	CCWGG	4 cut(s)	231, 1391, 1867, 2023
EcoRV	GATATC	2 cut(s)	1493, 1858
EcoT14I	CCWWGG	6 cut(s)	106, 787, 899, 987, 1260, 2320
EcoT22I	ATGCAT	1 cut(s)	1830
EcoT38I	GRGCYC	4 cut(s)	1528, 1668, 2098, 2254
EgeI	GGCGCC	1 cut(s)	482
EheI	GGCGCC	1 cut(s)	482
ErhI	CCWWGG	6 cut(s)	106, 787, 899, 987, 1260, 2320
Esp3I	CGTCTC	2 cut(s)	97, 438
FalI	AAGNNNNNCTT	2 cut(s)	792, 824
FaqI	GGGAC	6 cut(s)	41, 668, 1178, 1432, 1943, 2001
FauI	CCCGC	3 cut(s)	67, 1459, 2252
FblI	GTMKAC	4 cut(s)	728, 1292, 1714, 1783
FokI	GGATG	5 cut(s)	669, 1083, 1299, 1663, 2216
FriOI	GRGCYC	4 cut(s)	1528, 1668, 2098, 2254
FspBI	CTAG	4 cut(s)	467, 1340, 2177, 2255
GlaI	GCGC	3 cut(s)	482, 1465, 2329
GsaI	CCCAGC	1 cut(s)	1964
GsuI	CTGGAG	2 cut(s)	185, 1851
HaeII	RGCGCY	2 cut(s)	484, 2331
HaeIII	GGCC	8 cut(s)	105, 348, 904, 1356, 2022, 2087, 2243, 2369
HapII	CCGG	7 cut(s)	188, 269, 374, 639, 1018, 1560, 1861
HgaI	GACGC	3 cut(s)	35, 420, 1945
HhaI	GCGC	3 cut(s)	483, 1466, 2330
Hin1I	GRCGYC	2 cut(s)	27, 481
Hin6I	GCGC	3 cut(s)	481, 1464, 2328
HinP1I	GCGC	3 cut(s)	481, 1464, 2328
HincII	GTYRAC	1 cut(s)	361
HindII	GTYRAC	1 cut(s)	361
HinfI	GANTC	9 cut(s)	118, 144, 620, 847, 1079, 1289, 1650, 1724, 1864
HpaII	CCGG	7 cut(s)	188, 269, 374, 639, 1018, 1560, 1861
HphI	GGTGA	5 cut(s)	79, 169, 557, 1019, 1040
Hpy99I	CGWCG	2 cut(s)	29, 221
HpyAV	CCTTC	8 cut(s)	73, 338, 542, 836, 861, 1175, 1346, 2022
HpyCH4III	ACNGT	5 cut(s)	91, 1309, 1544, 1897, 2110
HpyCH4IV	ACGT	4 cut(s)	54, 168, 317, 1990
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1022, 1093, 1394, 1612, 1834, 2093, 2249, 2270, 2331
HpySE526I	ACGT	4 cut(s)	54, 168, 317, 1990
Hsp92I	GRCGYC	2 cut(s)	27, 481
HspAI	GCGC	3 cut(s)	481, 1464, 2328
KasI	GGCGCC	1 cut(s)	480
Kpn2I	TCCGGA	1 cut(s)	1860
KpnI	GGTACC	1 cut(s)	2424
KspI	CCGCGG	1 cut(s)	2248
Kzo9I	GATC	8 cut(s)	298, 694, 802, 1159, 1246, 1503, 1771, 1845
LmnI	GCTCC	9 cut(s)	39, 149, 204, 382, 770, 1336, 1531, 2057, 2249
Lsp1109I	GCAGC	8 cut(s)	183, 613, 1375, 1807, 1846, 2047, 2219, 2285
LweI	GCATC	9 cut(s)	123, 445, 962, 1105, 1321, 1675, 1685, 1903, 2194
MaeI	CTAG	4 cut(s)	467, 1340, 2177, 2255
MaeII	ACGT	4 cut(s)	54, 168, 317, 1990
MaeIII	GTNAC	4 cut(s)	38, 594, 1028, 2031
MalI	GATC	8 cut(s)	300, 696, 804, 1161, 1248, 1505, 1773, 1847
MbiI	CCGCTC	1 cut(s)	152
MboI	GATC	8 cut(s)	298, 694, 802, 1159, 1246, 1503, 1771, 1845
MboII	GAAGA	6 cut(s)	274, 615, 629, 1169, 1256, 2331
MflI	RGATCY	1 cut(s)	1771
MhlI	GDGCHC	6 cut(s)	1018, 1528, 1552, 1668, 2098, 2254
MluCI	AATT	9 cut(s)	82, 227, 585, 722, 1039, 1214, 1271, 1407, 1638
MluI	ACGCGT	1 cut(s)	1954
Mly113I	GGCGCC	1 cut(s)	481
MlyI	GAGTC	2 cut(s)	1298, 1858
MmeI	TCCRAC	3 cut(s)	121, 146, 1283
Mph1103I	ATGCAT	1 cut(s)	1830
MroI	TCCGGA	1 cut(s)	1860
MroXI	GAANNNNTTC	2 cut(s)	281, 846
MseI	TTAA	3 cut(s)	1172, 1331, 1881
MslI	CAYNNNNRTG	3 cut(s)	1026, 1926, 2309
MspA1I	CMGCKG	3 cut(s)	446, 2210, 2247
MspI	CCGG	7 cut(s)	188, 269, 374, 639, 1018, 1560, 1861
MspR9I	CCNGG	7 cut(s)	189, 233, 375, 1018, 1393, 1869, 2025
Mva1269I	GAATGC	3 cut(s)	439, 708, 1206
MvaI	CCWGG	4 cut(s)	233, 1393, 1869, 2025
MvnI	CGCG	4 cut(s)	1300, 1466, 1956, 2247
MwoI	GCNNNNNNNGC	9 cut(s)	1022, 1093, 1394, 1612, 1834, 2093, 2249, 2270, 2331
NarI	GGCGCC	1 cut(s)	481
NciI	CCSGG	3 cut(s)	189, 375, 1018
NcoI	CCATGG	5 cut(s)	106, 899, 987, 1260, 2320
NdeII	GATC	8 cut(s)	298, 694, 802, 1159, 1246, 1503, 1771, 1845
NheI	GCTAGC	1 cut(s)	1339
NlaIV	GGNNCC	7 cut(s)	267, 273, 384, 482, 1527, 1773, 2422
NmuCI	GTSAC	1 cut(s)	1028
NsiI	ATGCAT	1 cut(s)	1830
NspI	RCATGY	3 cut(s)	1025, 1931, 2077
PaeI	GCATGC	3 cut(s)	1025, 1931, 2077
PaqCI	CACCTGC	1 cut(s)	1016
PceI	AGGCCT	1 cut(s)	1356
PctI	GAATGC	3 cut(s)	439, 708, 1206
PdmI	GAANNNNTTC	2 cut(s)	281, 846
PfeI	GAWTC	7 cut(s)	118, 144, 620, 847, 1079, 1650, 1724
PleI	GAGTC	2 cut(s)	1297, 1858
PluTI	GGCGCC	1 cut(s)	484
PpsI	GAGTC	2 cut(s)	1297, 1858
PshAI	GACNNNNGTC	1 cut(s)	2349
Psp124BI	GAGCTC	1 cut(s)	2254
Psp6I	CCWGG	4 cut(s)	231, 1391, 1867, 2023
PspFI	CCCAGC	1 cut(s)	1960
PspGI	CCWGG	4 cut(s)	231, 1391, 1867, 2023
PspN4I	GGNNCC	7 cut(s)	267, 273, 384, 482, 1527, 1773, 2422
PspPI	GGNCC	6 cut(s)	784, 984, 2021, 2242, 2367, 2399
PsuI	RGATCY	1 cut(s)	1771
PvuII	CAGCTG	1 cut(s)	2210
RsaI	GTAC	4 cut(s)	295, 1875, 1953, 2422
RsaNI	GTAC	4 cut(s)	294, 1874, 1952, 2421
RseI	CAYNNNNRTG	3 cut(s)	1026, 1926, 2309
SacI	GAGCTC	1 cut(s)	2254
SacII	CCGCGG	1 cut(s)	2248
SaqAI	TTAA	3 cut(s)	1172, 1331, 1881
Sau3AI	GATC	8 cut(s)	298, 694, 802, 1159, 1246, 1503, 1771, 1845
Sau96I	GGNCC	6 cut(s)	784, 984, 2021, 2242, 2367, 2399
SchI	GAGTC	2 cut(s)	1298, 1858
ScrFI	CCNGG	7 cut(s)	189, 233, 375, 1018, 1393, 1869, 2025
SduI	GDGCHC	6 cut(s)	1018, 1528, 1552, 1668, 2098, 2254
SfaNI	GCATC	9 cut(s)	123, 445, 962, 1105, 1321, 1675, 1685, 1903, 2194
SfcI	CTRYAG	1 cut(s)	2441
SfoI	GGCGCC	1 cut(s)	482
Sfr303I	CCGCGG	1 cut(s)	2248
SgrBI	CCGCGG	1 cut(s)	2248
SinI	GGWCC	3 cut(s)	784, 984, 2399
SmiMI	CAYNNNNRTG	3 cut(s)	1026, 1926, 2309
SmlI	CTYRAG	2 cut(s)	1628, 2383
SmoI	CTYRAG	2 cut(s)	1628, 2383
SphI	GCATGC	3 cut(s)	1025, 1931, 2077
Sse9I	AATT	9 cut(s)	82, 227, 585, 722, 1039, 1214, 1271, 1407, 1638
SseBI	AGGCCT	1 cut(s)	1356
SspDI	GGCGCC	1 cut(s)	480
SspMI	CTAG	4 cut(s)	467, 1340, 2177, 2255
SstI	GAGCTC	1 cut(s)	2254
StuI	AGGCCT	1 cut(s)	1356
StyD4I	CCNGG	7 cut(s)	187, 231, 373, 1016, 1391, 1867, 2023
StyI	CCWWGG	6 cut(s)	106, 787, 899, 987, 1260, 2320
TaaI	ACNGT	5 cut(s)	91, 1309, 1544, 1897, 2110
TaiI	ACGT	4 cut(s)	57, 171, 320, 1993
TaqI	TCGA	8 cut(s)	18, 24, 116, 219, 666, 697, 1698, 2167
TasI	AATT	9 cut(s)	82, 227, 585, 722, 1039, 1214, 1271, 1407, 1638
TatI	WGTACW	2 cut(s)	293, 1873
TauI	GCSGC	6 cut(s)	8, 47, 50, 155, 351, 2328
TfiI	GAWTC	7 cut(s)	118, 144, 620, 847, 1079, 1650, 1724
Tru1I	TTAA	3 cut(s)	1172, 1331, 1881
Tru9I	TTAA	3 cut(s)	1172, 1331, 1881
TscAI	CASTG	4 cut(s)	310, 547, 1314, 1822
TseFI	GTSAC	1 cut(s)	1028
TseI	GCWGC	8 cut(s)	196, 601, 1388, 1820, 1834, 2060, 2207, 2273
Tsp45I	GTSAC	1 cut(s)	1028
TspDTI	ATGAA	6 cut(s)	638, 671, 1228, 1293, 1716, 2421
TspGWI	ACGGA	3 cut(s)	26, 797, 935
TspRI	CASTG	4 cut(s)	310, 547, 1314, 1822
VneI	GTGCAC	1 cut(s)	1548
VpaK11BI	GGWCC	3 cut(s)	784, 984, 2399
XagI	CCTNNNNNAGG	1 cut(s)	1104
XapI	RAATTY	2 cut(s)	227, 1271
XceI	RCATGY	3 cut(s)	1025, 1931, 2077
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2327
XmiI	GTMKAC	4 cut(s)	728, 1292, 1714, 1783
XmnI	GAANNNNTTC	2 cut(s)	281, 846
XspI	CTAG	4 cut(s)	467, 1340, 2177, 2255
Zsp2I	ATGCAT	1 cut(s)	1830

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.