Acyl-CoA dehydrogenase family member
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06810 |
| fragaria_vesca | FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 FvH4_4g18700 |
| malus_domestica | MD13G1164300.v1.1 MD16G1164100.v1.1 |
| prunus_persica | Prupe.1G131800_v2.0.a1 Prupe.1G131800_v2.0.a1 Prupe.1G131800_v2.0.a1 |
| pyrus_communis | pycom13g14030 pycom16g13880 pycom16g13890 |
| rosa_chinensis | RchiOBHm_Chr3g0480631 RchiOBHm_Chr4g0423401 RchiOBHm_Chr6g0311831 |
| rosa_laevigata | RLG00000007561 |
| rosa_multiflora | Rmu_sc0002752.1_g000004 Rmu_ssc0000174.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00365600 |
| rosa_rugosa | Rorug04G0187300 |
| rosa_samantha | Rh1BG304700 Rh3AG236600 Rh3DG262000 Rh4AG246200 Rh4AG246300 Rh4BG251700 Rh4CG260200 Rh4DG247100 |
| rosa_wichuraiana | Rw4G021160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 508, 1460 |
| AciI | CCGC | 3 cut(s) | 60, 197, 650 |
| AclI | AACGTT | 1 cut(s) | 66 |
| AclWI | GGATC | 2 cut(s) | 12, 714 |
| AcsI | RAATTY | 3 cut(s) | 1067, 1274, 1444 |
| AcuI | CTGAAG | 2 cut(s) | 236, 828 |
| AcyI | GRCGYC | 1 cut(s) | 493 |
| AfaI | GTAC | 2 cut(s) | 307, 414 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1109, 1205, 1206, 1562 |
| AgsI | TTSAA | 7 cut(s) | 629, 1138, 1176, 1279, 1479, 1487, 1543 |
| AjnI | CCWGG | 3 cut(s) | 243, 1318, 1394 |
| AluBI | AGCT | 7 cut(s) | 382, 437, 595, 777, 1040, 1299, 1342 |
| AluI | AGCT | 7 cut(s) | 382, 437, 595, 777, 1040, 1299, 1342 |
| Alw21I | GWGCWC | 2 cut(s) | 439, 1555 |
| Alw26I | GTCTC | 1 cut(s) | 109 |
| Alw44I | GTGCAC | 1 cut(s) | 1551 |
| AlwI | GGATC | 2 cut(s) | 12, 714 |
| AoxI | GGCC | 3 cut(s) | 905, 1357, 1398 |
| ApaLI | GTGCAC | 1 cut(s) | 1551 |
| ApeKI | GCWGC | 3 cut(s) | 644, 647, 1391 |
| ApoI | RAATTY | 3 cut(s) | 1067, 1274, 1444 |
| AseI | ATTAAT | 1 cut(s) | 1409 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 849 |
| AspLEI | GCGC | 3 cut(s) | 19, 363, 1469 |
| AspS9I | GGNCC | 1 cut(s) | 1398 |
| AsuC2I | CCSGG | 3 cut(s) | 201, 387, 1021 |
| AsuHPI | GGTGA | 2 cut(s) | 569, 827 |
| AsuNHI | GCTAGC | 1 cut(s) | 1342 |
| BaeGI | GKGCMC | 2 cut(s) | 1021, 1555 |
| BanII | GRGCYC | 2 cut(s) | 439, 1531 |
| Bbv12I | GWGCWC | 2 cut(s) | 439, 1555 |
| BbvI | GCAGC | 3 cut(s) | 656, 659, 1378 |
| BccI | CCATC | 3 cut(s) | 479, 978, 1412 |
| BceAI | ACGGC | 2 cut(s) | 212, 530 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 352, 386 |
| BciT130I | CCWGG | 3 cut(s) | 245, 1320, 1396 |
| BclI | TGATCA | 1 cut(s) | 1162 |
| BcnI | CCSGG | 3 cut(s) | 201, 387, 1021 |
| BcoDI | GTCTC | 1 cut(s) | 109 |
| BfaI | CTAG | 4 cut(s) | 440, 479, 1296, 1343 |
| BfuAI | ACCTGC | 2 cut(s) | 508, 1460 |
| BisI | GCNGC | 4 cut(s) | 197, 645, 648, 1392 |
| BlsI | GCNGC | 4 cut(s) | 198, 646, 649, 1393 |
| Bme1390I | CCNGG | 6 cut(s) | 201, 245, 387, 1021, 1320, 1396 |
| BmgT120I | GGNCC | 1 cut(s) | 1398 |
| BmiI | GGNNCC | 5 cut(s) | 279, 285, 328, 840, 1530 |
| BmrFI | CCNGG | 6 cut(s) | 201, 245, 387, 1021, 1320, 1396 |
| BmrI | ACTGGG | 2 cut(s) | 739, 1194 |
| BmsI | GCATC | 4 cut(s) | 173, 452, 457, 965 |
| BmtI | GCTAGC | 1 cut(s) | 1346 |
| BmuI | ACTGGG | 2 cut(s) | 739, 1194 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1283, 1315, 1433, 1465 |
| BpmI | CTGGAG | 2 cut(s) | 197, 1026 |
| BpuEI | CTTGAG | 1 cut(s) | 1110 |
| BpuMI | CCSGG | 3 cut(s) | 201, 387, 1021 |
| BsaHI | GRCGYC | 1 cut(s) | 493 |
| BsaJI | CCNNGG | 5 cut(s) | 200, 902, 1263, 1319, 1395 |
| BsaWI | WCCGGW | 1 cut(s) | 280 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 23, 53, 1316, 1346 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1109, 1205, 1206, 1562 |
| Bse1I | ACTGG | 4 cut(s) | 214, 559, 734, 1200 |
| BseBI | CCWGG | 3 cut(s) | 245, 1320, 1396 |
| BseDI | CCNNGG | 5 cut(s) | 200, 902, 1263, 1319, 1395 |
| BseGI | GGATG | 3 cut(s) | 443, 694, 1315 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1109, 1205, 1206, 1562 |
| BseMII | CTCAG | 4 cut(s) | 390, 872, 906, 1281 |
| BseNI | ACTGG | 4 cut(s) | 214, 559, 734, 1200 |
| BseRI | GAGGAG | 5 cut(s) | 418, 421, 966, 1023, 1340 |
| BseSI | GKGCMC | 2 cut(s) | 1021, 1555 |
| BseXI | GCAGC | 3 cut(s) | 656, 659, 1378 |
| BseYI | CCCAGC | 1 cut(s) | 1028 |
| BshFI | GGCC | 3 cut(s) | 907, 1359, 1400 |
| BsiHKAI | GWGCWC | 2 cut(s) | 439, 1555 |
| BsiSI | CCGG | 4 cut(s) | 200, 281, 386, 1021 |
| BslFI | GGGAC | 3 cut(s) | 680, 1046, 1181 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1109, 1205, 1206, 1562 |
| BsmAI | GTCTC | 1 cut(s) | 109 |
| BsmFI | GGGAC | 3 cut(s) | 680, 1046, 1181 |
| BsmI | GAATGC | 1 cut(s) | 720 |
| BsnI | GGCC | 3 cut(s) | 907, 1359, 1400 |
| Bsp1286I | GDGCHC | 4 cut(s) | 439, 1021, 1531, 1555 |
| Bsp143I | GATC | 5 cut(s) | 4, 706, 1162, 1249, 1506 |
| Bsp19I | CCATGG | 2 cut(s) | 902, 1263 |
| BspACI | CCGC | 3 cut(s) | 60, 197, 650 |
| BspANI | GGCC | 3 cut(s) | 907, 1359, 1400 |
| BspCNI | CTCAG | 4 cut(s) | 391, 871, 907, 1282 |
| BspLI | GGNNCC | 5 cut(s) | 279, 285, 328, 840, 1530 |
| BspMI | ACCTGC | 2 cut(s) | 508, 1460 |
| BspOI | GCTAGC | 1 cut(s) | 1346 |
| BspPI | GGATC | 2 cut(s) | 12, 714 |
| BsrI | ACTGG | 4 cut(s) | 214, 559, 734, 1200 |
| BssECI | CCNNGG | 5 cut(s) | 200, 902, 1263, 1319, 1395 |
| BssMI | GATC | 5 cut(s) | 4, 706, 1162, 1249, 1506 |
| BssNI | GRCGYC | 1 cut(s) | 493 |
| BssT1I | CCWWGG | 2 cut(s) | 902, 1263 |
| Bst2UI | CCWGG | 3 cut(s) | 245, 1320, 1396 |
| Bst4CI | ACNGT | 5 cut(s) | 103, 299, 884, 1312, 1388 |
| BstACI | GRCGYC | 1 cut(s) | 493 |
| BstC8I | GCNNGC | 4 cut(s) | 566, 652, 1026, 1344 |
| BstDEI | CTNAG | 6 cut(s) | 108, 399, 655, 858, 915, 1290 |
| BstDSI | CCRYGG | 2 cut(s) | 902, 1263 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1107 |
| BstF5I | GGATG | 3 cut(s) | 443, 694, 1315 |
| BstHHI | GCGC | 3 cut(s) | 19, 363, 1469 |
| BstKTI | GATC | 5 cut(s) | 7, 709, 1165, 1252, 1509 |
| BstMAI | GTCTC | 1 cut(s) | 109 |
| BstMBI | GATC | 5 cut(s) | 4, 706, 1162, 1249, 1506 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1025, 1121, 1397, 1464 |
| BstNI | CCWGG | 3 cut(s) | 245, 1320, 1396 |
| BstNSI | RCATGY | 1 cut(s) | 1028 |
| BstSCI | CCNGG | 6 cut(s) | 199, 243, 385, 1019, 1318, 1394 |
| BstSLI | GKGCMC | 2 cut(s) | 1021, 1555 |
| BstV1I | GCAGC | 3 cut(s) | 656, 659, 1378 |
| BsuRI | GGCC | 3 cut(s) | 907, 1359, 1400 |
| BtgI | CCRYGG | 2 cut(s) | 902, 1263 |
| BtgZI | GCGATG | 1 cut(s) | 150 |
| BtsCI | GGATG | 3 cut(s) | 443, 694, 1315 |
| BtsIMutI | CAGTG | 1 cut(s) | 1393 |
| BveI | ACCTGC | 2 cut(s) | 508, 1460 |
| Cac8I | GCNNGC | 4 cut(s) | 566, 652, 1026, 1344 |
| CfoI | GCGC | 3 cut(s) | 19, 363, 1469 |
| Cfr13I | GGNCC | 1 cut(s) | 1398 |
| CseI | GACGC | 1 cut(s) | 482 |
| Csp6I | GTAC | 2 cut(s) | 306, 413 |
| CviQI | GTAC | 2 cut(s) | 306, 413 |
| DdeI | CTNAG | 6 cut(s) | 108, 399, 655, 858, 915, 1290 |
| DpnI | GATC | 5 cut(s) | 6, 708, 1164, 1251, 1508 |
| DpnII | GATC | 5 cut(s) | 4, 706, 1162, 1249, 1506 |
| EciI | GGCGGA | 1 cut(s) | 49 |
| Ecl136II | GAGCTC | 1 cut(s) | 437 |
| Eco130I | CCWWGG | 2 cut(s) | 902, 1263 |
| Eco147I | AGGCCT | 1 cut(s) | 1359 |
| Eco24I | GRGCYC | 2 cut(s) | 439, 1531 |
| Eco32I | GATATC | 1 cut(s) | 1496 |
| Eco53kI | GAGCTC | 1 cut(s) | 437 |
| Eco57I | CTGAAG | 2 cut(s) | 236, 828 |
| EcoICRI | GAGCTC | 1 cut(s) | 437 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1107 |
| EcoRI | GAATTC | 2 cut(s) | 1274, 1444 |
| EcoRII | CCWGG | 3 cut(s) | 243, 1318, 1394 |
| EcoRV | GATATC | 1 cut(s) | 1496 |
| EcoT14I | CCWWGG | 2 cut(s) | 902, 1263 |
| EcoT22I | ATGCAT | 1 cut(s) | 1063 |
| EcoT38I | GRGCYC | 2 cut(s) | 439, 1531 |
| ErhI | CCWWGG | 2 cut(s) | 902, 1263 |
| FaqI | GGGAC | 3 cut(s) | 680, 1046, 1181 |
| FauI | CCCGC | 1 cut(s) | 643 |
| FbaI | TGATCA | 1 cut(s) | 1162 |
| Fnu4HI | GCNGC | 4 cut(s) | 197, 645, 648, 1392 |
| FokI | GGATG | 3 cut(s) | 430, 681, 1302 |
| FriOI | GRGCYC | 2 cut(s) | 439, 1531 |
| Fsp4HI | GCNGC | 4 cut(s) | 197, 645, 648, 1392 |
| FspBI | CTAG | 4 cut(s) | 440, 479, 1296, 1343 |
| GlaI | GCGC | 3 cut(s) | 18, 362, 1468 |
| GluI | GCNGC | 4 cut(s) | 197, 645, 648, 1392 |
| GsaI | CCCAGC | 1 cut(s) | 1032 |
| GsuI | CTGGAG | 2 cut(s) | 197, 1026 |
| HaeIII | GGCC | 3 cut(s) | 907, 1359, 1400 |
| HapII | CCGG | 4 cut(s) | 200, 281, 386, 1021 |
| HgaI | GACGC | 1 cut(s) | 482 |
| HhaI | GCGC | 3 cut(s) | 19, 363, 1469 |
| Hin1I | GRCGYC | 1 cut(s) | 493 |
| Hin6I | GCGC | 3 cut(s) | 17, 361, 1467 |
| HinP1I | GCGC | 3 cut(s) | 17, 361, 1467 |
| HindIII | AAGCTT | 1 cut(s) | 380 |
| HinfI | GANTC | 7 cut(s) | 130, 311, 632, 850, 1082, 1099, 1292 |
| HpaII | CCGG | 4 cut(s) | 200, 281, 386, 1021 |
| HphI | GGTGA | 2 cut(s) | 569, 827 |
| Hpy166II | GTNNAC | 3 cut(s) | 295, 796, 1553 |
| Hpy188I | TCNGA | 6 cut(s) | 94, 135, 326, 582, 1216, 1441 |
| Hpy8I | GTNNAC | 3 cut(s) | 295, 796, 1553 |
| Hpy99I | CGWCG | 5 cut(s) | 139, 233, 498, 794, 1080 |
| HpyAV | CCTTC | 7 cut(s) | 350, 554, 812, 839, 864, 946, 1349 |
| HpyCH4III | ACNGT | 5 cut(s) | 103, 299, 884, 1312, 1388 |
| HpyCH4IV | ACGT | 6 cut(s) | 66, 137, 180, 765, 789, 1303 |
| HpyCH4V | TGCA | 5 cut(s) | 431, 510, 968, 1061, 1553 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1025, 1121, 1397, 1464 |
| HpyF3I | CTNAG | 6 cut(s) | 108, 399, 655, 858, 915, 1290 |
| HpySE526I | ACGT | 6 cut(s) | 66, 137, 180, 765, 789, 1303 |
| Hsp92I | GRCGYC | 1 cut(s) | 493 |
| HspAI | GCGC | 3 cut(s) | 17, 361, 1467 |
| Ksp22I | TGATCA | 1 cut(s) | 1162 |
| Kzo9I | GATC | 5 cut(s) | 4, 706, 1162, 1249, 1506 |
| LmnI | GCTCC | 4 cut(s) | 216, 953, 1339, 1534 |
| Lsp1109I | GCAGC | 3 cut(s) | 656, 659, 1378 |
| LweI | GCATC | 4 cut(s) | 173, 452, 457, 965 |
| MaeI | CTAG | 4 cut(s) | 440, 479, 1296, 1343 |
| MaeII | ACGT | 6 cut(s) | 66, 137, 180, 765, 789, 1303 |
| MaeIII | GTNAC | 3 cut(s) | 497, 606, 761 |
| MalI | GATC | 5 cut(s) | 6, 708, 1164, 1251, 1508 |
| MboI | GATC | 5 cut(s) | 4, 706, 1162, 1249, 1506 |
| MboII | GAAGA | 7 cut(s) | 202, 242, 595, 627, 641, 879, 1259 |
| MfeI | CAATTG | 1 cut(s) | 1543 |
| MhlI | GDGCHC | 4 cut(s) | 439, 1021, 1531, 1555 |
| MlyI | GAGTC | 1 cut(s) | 1301 |
| MmeI | TCCRAC | 2 cut(s) | 158, 1286 |
| Mph1103I | ATGCAT | 1 cut(s) | 1063 |
| MroXI | GAANNNNTTC | 1 cut(s) | 849 |
| MseI | TTAA | 2 cut(s) | 1334, 1409 |
| MslI | CAYNNNNRTG | 1 cut(s) | 12 |
| MspA1I | CMGCKG | 1 cut(s) | 650 |
| MspI | CCGG | 4 cut(s) | 200, 281, 386, 1021 |
| MspR9I | CCNGG | 6 cut(s) | 201, 245, 387, 1021, 1320, 1396 |
| MunI | CAATTG | 1 cut(s) | 1543 |
| Mva1269I | GAATGC | 1 cut(s) | 720 |
| MvaI | CCWGG | 3 cut(s) | 245, 1320, 1396 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1025, 1121, 1397, 1464 |
| NciI | CCSGG | 3 cut(s) | 201, 387, 1021 |
| NcoI | CCATGG | 2 cut(s) | 902, 1263 |
| NdeII | GATC | 5 cut(s) | 4, 706, 1162, 1249, 1506 |
| NheI | GCTAGC | 1 cut(s) | 1342 |
| NlaIV | GGNNCC | 5 cut(s) | 279, 285, 328, 840, 1530 |
| NmuCI | GTSAC | 2 cut(s) | 497, 761 |
| NsiI | ATGCAT | 1 cut(s) | 1063 |
| NspI | RCATGY | 1 cut(s) | 1028 |
| PaeI | GCATGC | 1 cut(s) | 1028 |
| PceI | AGGCCT | 1 cut(s) | 1359 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 134 |
| PctI | GAATGC | 1 cut(s) | 720 |
| PdmI | GAANNNNTTC | 1 cut(s) | 849 |
| PfeI | GAWTC | 6 cut(s) | 130, 311, 632, 850, 1082, 1099 |
| PkrI | GCNGC | 4 cut(s) | 198, 646, 649, 1393 |
| PleI | GAGTC | 1 cut(s) | 1300 |
| PpsI | GAGTC | 1 cut(s) | 1300 |
| PshBI | ATTAAT | 1 cut(s) | 1409 |
| Psp124BI | GAGCTC | 1 cut(s) | 439 |
| Psp1406I | AACGTT | 1 cut(s) | 66 |
| Psp6I | CCWGG | 3 cut(s) | 243, 1318, 1394 |
| PspFI | CCCAGC | 1 cut(s) | 1028 |
| PspGI | CCWGG | 3 cut(s) | 243, 1318, 1394 |
| PspN4I | GGNNCC | 5 cut(s) | 279, 285, 328, 840, 1530 |
| PspPI | GGNCC | 1 cut(s) | 1398 |
| RsaI | GTAC | 2 cut(s) | 307, 414 |
| RsaNI | GTAC | 2 cut(s) | 306, 413 |
| RseI | CAYNNNNRTG | 1 cut(s) | 12 |
| SacI | GAGCTC | 1 cut(s) | 439 |
| SaqAI | TTAA | 2 cut(s) | 1334, 1409 |
| SatI | GCNGC | 4 cut(s) | 197, 645, 648, 1392 |
| Sau3AI | GATC | 5 cut(s) | 4, 706, 1162, 1249, 1506 |
| Sau96I | GGNCC | 1 cut(s) | 1398 |
| SchI | GAGTC | 1 cut(s) | 1301 |
| ScrFI | CCNGG | 6 cut(s) | 201, 245, 387, 1021, 1320, 1396 |
| SduI | GDGCHC | 4 cut(s) | 439, 1021, 1531, 1555 |
| SfaNI | GCATC | 4 cut(s) | 173, 452, 457, 965 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 12 |
| SmlI | CTYRAG | 1 cut(s) | 1125 |
| SmoI | CTYRAG | 1 cut(s) | 1125 |
| SphI | GCATGC | 1 cut(s) | 1028 |
| SseBI | AGGCCT | 1 cut(s) | 1359 |
| SsiI | CCGC | 3 cut(s) | 60, 197, 650 |
| SspMI | CTAG | 4 cut(s) | 440, 479, 1296, 1343 |
| SstI | GAGCTC | 1 cut(s) | 439 |
| StuI | AGGCCT | 1 cut(s) | 1359 |
| StyD4I | CCNGG | 6 cut(s) | 199, 243, 385, 1019, 1318, 1394 |
| StyI | CCWWGG | 2 cut(s) | 902, 1263 |
| TaaI | ACNGT | 5 cut(s) | 103, 299, 884, 1312, 1388 |
| TaiI | ACGT | 6 cut(s) | 69, 140, 183, 768, 792, 1306 |
| TaqI | TCGA | 8 cut(s) | 24, 30, 128, 231, 372, 709, 949, 1075 |
| TaqII | GACCGA | 1 cut(s) | 464 |
| TatI | WGTACW | 1 cut(s) | 305 |
| TauI | GCSGC | 1 cut(s) | 199 |
| TfiI | GAWTC | 6 cut(s) | 130, 311, 632, 850, 1082, 1099 |
| Tru1I | TTAA | 2 cut(s) | 1334, 1409 |
| Tru9I | TTAA | 2 cut(s) | 1334, 1409 |
| TscAI | CASTG | 1 cut(s) | 1393 |
| TseFI | GTSAC | 2 cut(s) | 497, 761 |
| TseI | GCWGC | 3 cut(s) | 644, 647, 1391 |
| Tsp45I | GTSAC | 2 cut(s) | 497, 761 |
| TspDTI | ATGAA | 5 cut(s) | 650, 683, 879, 1231, 1304 |
| TspGWI | ACGGA | 1 cut(s) | 1095 |
| TspRI | CASTG | 1 cut(s) | 1393 |
| VneI | GTGCAC | 1 cut(s) | 1551 |
| VspI | ATTAAT | 1 cut(s) | 1409 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1107 |
| XapI | RAATTY | 3 cut(s) | 1067, 1274, 1444 |
| XceI | RCATGY | 1 cut(s) | 1028 |
| XmnI | GAANNNNTTC | 1 cut(s) | 849 |
| XspI | CTAG | 4 cut(s) | 440, 479, 1296, 1343 |
| Zsp2I | ATGCAT | 1 cut(s) | 1063 |