PHD-zinc-finger like domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14740 AT3G14740 |
| fragaria_vesca | FvH4_3g17540 FvH4_3g17570 FvH4_3g17570 FvH4_3g17570 FvH4_3g17570 |
| malus_domestica | MD03G1251300.v1.1 MD04G1118000.v1.1 |
| prunus_persica | Prupe.4G155300_v2.0.a1 |
| pyrus_communis | pycom03g19870 |
| rosa_chinensis | RchiOBHm_Chr5g0029121 RchiOBHm_Chr5g0029161 RchiOBHm_Chr5g0029281 |
| rosa_laevigata | RLG00000033147 RLG00000033149 |
| rosa_multiflora | Rmu_co8077588.1_g000001 Rmu_sc0012347.1_g000003 Rmu_sc0025685.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00050720 Rroxscaffold_1G00050750 |
| rosa_rugosa | Rorug05G0112800 |
| rosa_samantha | Rh5AG204700 Rh5AG204900 Rh5BG203300 Rh5BG203600 Rh5CG224400 Rh5CG224500 Rh5DG207000 |
| rosa_wichuraiana | Rw5G018580 Rw5G018630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 969 |
| AccI | GTMKAC | 1 cut(s) | 592 |
| AccII | CGCG | 1 cut(s) | 822 |
| AccIII | TCCGGA | 1 cut(s) | 718 |
| AciI | CCGC | 2 cut(s) | 657, 822 |
| AclWI | GGATC | 6 cut(s) | 224, 224, 383, 479, 731, 744 |
| AcuI | CTGAAG | 1 cut(s) | 762 |
| AfaI | GTAC | 3 cut(s) | 475, 646, 992 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 969 |
| AgsI | TTSAA | 3 cut(s) | 305, 344, 493 |
| AluBI | AGCT | 3 cut(s) | 68, 85, 410 |
| AluI | AGCT | 3 cut(s) | 68, 85, 410 |
| AlwI | GGATC | 6 cut(s) | 224, 224, 383, 479, 731, 744 |
| Aor13HI | TCCGGA | 1 cut(s) | 718 |
| ApeKI | GCWGC | 2 cut(s) | 68, 636 |
| AsuHPI | GGTGA | 2 cut(s) | 494, 590 |
| BamHI | GGATCC | 1 cut(s) | 736 |
| BanII | GRGCYC | 1 cut(s) | 694 |
| BauI | CACGAG | 1 cut(s) | 144 |
| BbsI | GAAGAC | 1 cut(s) | 191 |
| BbvI | GCAGC | 2 cut(s) | 55, 623 |
| BccI | CCATC | 7 cut(s) | 440, 473, 506, 520, 674, 681, 780 |
| BfaI | CTAG | 3 cut(s) | 348, 353, 395 |
| BglII | AGATCT | 5 cut(s) | 19, 58, 415, 624, 892 |
| BisI | GCNGC | 2 cut(s) | 69, 637 |
| BlsI | GCNGC | 2 cut(s) | 70, 638 |
| BmiI | GGNNCC | 1 cut(s) | 738 |
| BpiI | GAAGAC | 1 cut(s) | 191 |
| BsaBI | GATNNNNATC | 2 cut(s) | 234, 483 |
| BsaWI | WCCGGW | 3 cut(s) | 97, 245, 718 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 92, 122 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 969 |
| Bse118I | RCCGGY | 1 cut(s) | 121 |
| Bse8I | GATNNNNATC | 2 cut(s) | 234, 483 |
| BseAI | TCCGGA | 1 cut(s) | 718 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseJI | GATNNNNATC | 2 cut(s) | 234, 483 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 969 |
| BseRI | GAGGAG | 1 cut(s) | 18 |
| BseXI | GCAGC | 2 cut(s) | 55, 623 |
| Bsh1236I | CGCG | 1 cut(s) | 822 |
| BsiSI | CCGG | 5 cut(s) | 98, 122, 203, 246, 719 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 969 |
| Bsp1286I | GDGCHC | 1 cut(s) | 694 |
| Bsp13I | TCCGGA | 1 cut(s) | 718 |
| Bsp1407I | TGTACA | 1 cut(s) | 644 |
| BspACI | CCGC | 2 cut(s) | 657, 822 |
| BspEI | TCCGGA | 1 cut(s) | 718 |
| BspFNI | CGCG | 1 cut(s) | 822 |
| BspLI | GGNNCC | 1 cut(s) | 738 |
| BspPI | GGATC | 6 cut(s) | 224, 224, 383, 479, 731, 744 |
| BsrFI | RCCGGY | 1 cut(s) | 121 |
| BsrGI | TGTACA | 1 cut(s) | 644 |
| BssAI | RCCGGY | 1 cut(s) | 121 |
| BssSI | CACGAG | 1 cut(s) | 144 |
| Bst2BI | CACGAG | 1 cut(s) | 144 |
| Bst4CI | ACNGT | 2 cut(s) | 48, 597 |
| Bst6I | CTCTTC | 4 cut(s) | 125, 300, 742, 917 |
| BstAUI | TGTACA | 1 cut(s) | 644 |
| BstC8I | GCNNGC | 1 cut(s) | 123 |
| BstEII | GGTNACC | 1 cut(s) | 254 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstFNI | CGCG | 1 cut(s) | 822 |
| BstPI | GGTNACC | 1 cut(s) | 254 |
| BstUI | CGCG | 1 cut(s) | 822 |
| BstV1I | GCAGC | 2 cut(s) | 55, 623 |
| BstV2I | GAAGAC | 1 cut(s) | 191 |
| BstX2I | RGATCY | 8 cut(s) | 19, 58, 216, 388, 415, 624, 736, 892 |
| BstYI | RGATCY | 8 cut(s) | 19, 58, 216, 388, 415, 624, 736, 892 |
| BtgZI | GCGATG | 1 cut(s) | 677 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| BtsIMutI | CAGTG | 1 cut(s) | 602 |
| Cac8I | GCNNGC | 1 cut(s) | 123 |
| Cfr10I | RCCGGY | 1 cut(s) | 121 |
| CseI | GACGC | 2 cut(s) | 176, 828 |
| Csp6I | GTAC | 3 cut(s) | 474, 645, 991 |
| CviAII | CATG | 2 cut(s) | 533, 869 |
| CviJI | RGCY | 7 cut(s) | 68, 85, 295, 410, 566, 692, 863 |
| CviKI_1 | RGCY | 7 cut(s) | 68, 85, 295, 410, 566, 692, 863 |
| CviQI | GTAC | 3 cut(s) | 474, 645, 991 |
| Eam1104I | CTCTTC | 4 cut(s) | 125, 300, 742, 917 |
| EarI | CTCTTC | 4 cut(s) | 125, 300, 742, 917 |
| Eco24I | GRGCYC | 1 cut(s) | 694 |
| Eco57I | CTGAAG | 1 cut(s) | 762 |
| Eco91I | GGTNACC | 1 cut(s) | 254 |
| EcoO65I | GGTNACC | 1 cut(s) | 254 |
| EcoT38I | GRGCYC | 1 cut(s) | 694 |
| FaeI | CATG | 2 cut(s) | 536, 872 |
| FatI | CATG | 2 cut(s) | 532, 868 |
| FauI | CCCGC | 1 cut(s) | 650 |
| FblI | GTMKAC | 1 cut(s) | 592 |
| Fnu4HI | GCNGC | 2 cut(s) | 69, 637 |
| FokI | GGATG | 1 cut(s) | 17 |
| FriOI | GRGCYC | 1 cut(s) | 694 |
| Fsp4HI | GCNGC | 2 cut(s) | 69, 637 |
| FspBI | CTAG | 3 cut(s) | 348, 353, 395 |
| GluI | GCNGC | 2 cut(s) | 69, 637 |
| HapII | CCGG | 5 cut(s) | 98, 122, 203, 246, 719 |
| HgaI | GACGC | 2 cut(s) | 176, 828 |
| Hin1II | CATG | 2 cut(s) | 536, 872 |
| HincII | GTYRAC | 1 cut(s) | 330 |
| HindII | GTYRAC | 1 cut(s) | 330 |
| HindIII | AAGCTT | 1 cut(s) | 408 |
| HinfI | GANTC | 4 cut(s) | 142, 344, 493, 550 |
| HpaII | CCGG | 5 cut(s) | 98, 122, 203, 246, 719 |
| HphI | GGTGA | 2 cut(s) | 494, 590 |
| Hpy166II | GTNNAC | 4 cut(s) | 330, 593, 645, 727 |
| Hpy188I | TCNGA | 2 cut(s) | 424, 844 |
| Hpy188III | TCNNGA | 8 cut(s) | 17, 62, 233, 353, 572, 719, 740, 911 |
| Hpy8I | GTNNAC | 4 cut(s) | 330, 593, 645, 727 |
| Hpy99I | CGWCG | 2 cut(s) | 170, 610 |
| HpyAV | CCTTC | 4 cut(s) | 569, 737, 746, 908 |
| HpyCH4III | ACNGT | 2 cut(s) | 48, 597 |
| HpyCH4V | TGCA | 2 cut(s) | 52, 115 |
| Hsp92II | CATG | 2 cut(s) | 536, 872 |
| Kpn2I | TCCGGA | 1 cut(s) | 718 |
| KroI | GCCGGC | 1 cut(s) | 121 |
| KroNI | GCCGGC | 1 cut(s) | 123 |
| Lsp1109I | GCAGC | 2 cut(s) | 55, 623 |
| MaeI | CTAG | 3 cut(s) | 348, 353, 395 |
| MaeIII | GTNAC | 2 cut(s) | 254, 871 |
| MfeI | CAATTG | 2 cut(s) | 315, 498 |
| MflI | RGATCY | 8 cut(s) | 19, 58, 216, 388, 415, 624, 736, 892 |
| MhlI | GDGCHC | 1 cut(s) | 694 |
| MluCI | AATT | 2 cut(s) | 315, 498 |
| MlyI | GAGTC | 1 cut(s) | 136 |
| MnlI | CCTC | 8 cut(s) | 36, 39, 126, 349, 402, 564, 727, 763 |
| MroI | TCCGGA | 1 cut(s) | 718 |
| MroNI | GCCGGC | 1 cut(s) | 121 |
| MseI | TTAA | 3 cut(s) | 41, 561, 884 |
| MspI | CCGG | 5 cut(s) | 98, 122, 203, 246, 719 |
| MunI | CAATTG | 2 cut(s) | 315, 498 |
| MvnI | CGCG | 1 cut(s) | 822 |
| NaeI | GCCGGC | 1 cut(s) | 123 |
| NgoMIV | GCCGGC | 1 cut(s) | 121 |
| NlaIII | CATG | 2 cut(s) | 536, 872 |
| NlaIV | GGNNCC | 1 cut(s) | 738 |
| PdiI | GCCGGC | 1 cut(s) | 123 |
| PfeI | GAWTC | 3 cut(s) | 344, 493, 550 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 969 |
| PkrI | GCNGC | 2 cut(s) | 70, 638 |
| PleI | GAGTC | 1 cut(s) | 136 |
| PpsI | GAGTC | 1 cut(s) | 136 |
| PspEI | GGTNACC | 1 cut(s) | 254 |
| PspN4I | GGNNCC | 1 cut(s) | 738 |
| PsuI | RGATCY | 8 cut(s) | 19, 58, 216, 388, 415, 624, 736, 892 |
| RsaI | GTAC | 3 cut(s) | 475, 646, 992 |
| RsaNI | GTAC | 3 cut(s) | 474, 645, 991 |
| SaqAI | TTAA | 3 cut(s) | 41, 561, 884 |
| SatI | GCNGC | 2 cut(s) | 69, 637 |
| SchI | GAGTC | 1 cut(s) | 136 |
| SduI | GDGCHC | 1 cut(s) | 694 |
| Sse9I | AATT | 2 cut(s) | 315, 498 |
| SsiI | CCGC | 2 cut(s) | 657, 822 |
| SspMI | CTAG | 3 cut(s) | 348, 353, 395 |
| TaaI | ACNGT | 2 cut(s) | 48, 597 |
| TaqI | TCGA | 2 cut(s) | 63, 608 |
| TasI | AATT | 2 cut(s) | 315, 498 |
| TatI | WGTACW | 3 cut(s) | 473, 644, 990 |
| TfiI | GAWTC | 3 cut(s) | 344, 493, 550 |
| Tru1I | TTAA | 3 cut(s) | 41, 561, 884 |
| Tru9I | TTAA | 3 cut(s) | 41, 561, 884 |
| TscAI | CASTG | 1 cut(s) | 602 |
| TseI | GCWGC | 2 cut(s) | 68, 636 |
| TspDTI | ATGAA | 5 cut(s) | 119, 456, 521, 680, 857 |
| TspRI | CASTG | 1 cut(s) | 602 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 969 |
| XbaI | TCTAGA | 1 cut(s) | 352 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 579 |
| XmiI | GTMKAC | 1 cut(s) | 592 |
| XspI | CTAG | 3 cut(s) | 348, 353, 395 |