AT3G24255

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0002415
Physical Location & Seq
Forward (+)
8788814 .. 8793371
4558 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G24255.2

Sequence Viewer

Length: 2241 bp
ATGGCTGGAGTGAAAGACAATGACAAAGCAGACATTCTTCACAGTTTCCCTTTTGCCTCCGGCGCACTACCTGTTCGTTACCTAGGGCTACCATTGCTGACAAAAAAGATGACGACAAGCGACTACGGCCCTCTCGTTGAAAAAATCAGAGTACGAATAGGTAAATGGACGGCGAGACACCTCTCCTTTGCGGGTCGTCTACAACTCATTAGTTCGGTAATCCATAGTCTAACCAACTTTTGGATGTCTGCGTTTCGTCTTCCAAGTGCCTGCATCAAAGAAATCGATAGCATTTGCTCTTCTTTTCTCTGGTCTGGCCCCGAACTGAATACAAAAAAGGCTAAAGTAGCATGGAGTGATGTTTGCACACCCAAAGATGAAGGAGGGTTAGGCATCAGATCTTTAAAGGAAGCAAACAAGGGTTCCTTTTGGTCTATCAGTGGGAACACAACTCTAGGATCATGGATGTGGAAGAAGATTCTTAAACACAGAGCTTTAGCTTCAGGTTTTGTGAAGCACGACATTCACAATGGCAGCAATACATCGTTTTGGTTTGATAACTGGTCAAAGATAGGAAGGCTGATTGATGTAACAGGTCATCGGGGTTGCATTGACATGGGAATCACTCTTCACGCCTCTGTAGCTGAAGCGGTTGTGAACCATAGACCAAGACGCCACCGACATGATACTCTGCTTCGAATAGAAGACGTCATTGCCGAGGTGCGCCACCAGGGACTTACTTCGGGGGAGGATACAGTTCGTTGGAAGGGAAATGGGGACATTTTTAAACCGTGTTTTAACACAAAGGAGACCTGGGCTGCAACTCGGGAACCAAAACTGAAAGTCAACTGGTATAAGGGTGTTTGGTTTTCACATGCAACGCCTAAATACTCAGTTTTAGCTTGGATAGCGATAAAGAATCGTCTAACTACGGGAGATCGGATGTTAAGTTGGAATGCGGGAGCTGACTCTTCGTGTGTGCTCTGTCACCACCTCGTGGAAACGCGCGACCACTTGTTCTTCACATGCCCTTACTCAGCAGAGGTTCCGTTCTTGACAAGATACACTTTTCAGCTAACTCTCCACTCTCTTTGGAAGGAAAGAAATGGCAGACGACATGGAGAAGTGCCGCAGGCTGCAGCTCAAATGATGAAGTATGAAAGTCAAATAATGGTGAAATTAAGTGATGGAAATCTGACAGATGCTTACTTGGAGTACTTGAGAAATGAGCTTCAGTCTGTGGAGGCTGAAAGTGCCAAAGTTTCTGAAGAAATTGAACGTCTTTCTCAGTCTCATGCCCTAGATTCTAGTAGGTTGCAAAGGGATCTTGAAGGTCTTTTACTGTCACTGGATTCTATGTCATCTCAGGATGTGGAGAAGTCAAAAGAGAATCAACCATCTAGCAGCTCAATGGAAGTATGTGAAGTGATTGATGATGACAAGTTTAAGATGTTTGAACTCGAAAATCAGATGGAGGAGAAAAGGATGATTCTTAAGTCATTGGAAGATCTGGATTCGTTACGTAAAAGGTTTGATGCTGCAGAACAAGTTGAGGACGCATTGACAGGCTTGAAGGTGCTCGAGTTTGACGGAAACTTTATTAGGCTCCAACTGCGAACATATATTCAAAAACTAGACGGTTTTCTTGGACAGCACAAATTTGACCACATTACTGAGCCATCTGAATTGATCCATGAATTGCTAATATACCTGAAGGATAAAACTACAGAGATAACAAAATTTGAGATGTTTCCAAATGATATATACATAGGAGACATCATCGAGGCAGCTGATTCTTTCAGGCAGGTAAGGTTACACTCTGCAGTGCTAGACACAAGATCTTCAGTCCAGTGGGTTGTCGCCAAAGTGCAAGATAAAATTATTTCAACAACTTTGAGAAAAGATTTTGTGATGAGTTCGAAAACAATTAGGTACACGTTTGAATACTACGACAAAGATGAAACAATTGTGGCTCATATAGCTGGAGGTATTGATGCATTTTTAAAGGTCTCTGATGGTTGGCCACTGCTGAATACCCCATTGAAGCTTGCATCTCTCAAGAACTCTGACAATCAGTCAAAGGGATTTTCTCTGAGCCTTATCAGCAAACTTGAGGAACTAGCGAACTCCTTGGATTTAGAGACCCGGCAAAACTTATCAGGCTTCATGGATGCTGTTGAGAAAATACTCGTGCAGCAAACCCGTGAAGAACTCAAGTCCAATGAATCCTCCCAAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

746

Amino Acids

84.87

Weight (kDa)

6.94

Isoelectric Point (pI)

39.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 711
Acc36I ACCTGC 1 cut(s) 1795
AccB7I CCANNNNNTGG 2 cut(s) 240, 997
AccI GTMKAC 1 cut(s) 199
AccII CGCG 2 cut(s) 1006, 1008
AciI CCGC 4 cut(s) 191, 650, 959, 1130
AclWI GGATC 3 cut(s) 466, 1332, 1684
AcoI YGGCCR 1 cut(s) 2021
AcsI RAATTY 2 cut(s) 1658, 1739
AcuI CTGAAG 6 cut(s) 486, 666, 1217, 1287, 1733, 1827
AcyI GRCGYC 2 cut(s) 673, 708
AdeI CACNNNGTG 1 cut(s) 997
AfaI GTAC 3 cut(s) 153, 1217, 1934
AfiI CCNNNNNNNGG 2 cut(s) 240, 997
AflII CTTAAG 1 cut(s) 1493
AflIII ACRYGT 1 cut(s) 1935
AgsI TTSAA 9 cut(s) 140, 1277, 1331, 1457, 1573, 1628, 1887, 1943, 2044
AhdI GACNNNNNGTC 1 cut(s) 2074
AjnI CCWGG 2 cut(s) 729, 812
Alw21I GWGCWC 2 cut(s) 984, 1581
Alw26I GTCTC 6 cut(s) 169, 803, 1296, 1767, 2014, 2135
AlwI GGATC 3 cut(s) 466, 1332, 1684
Ama87I CYCGRG 2 cut(s) 825, 1580
AoxI GGCC 3 cut(s) 127, 316, 2021
ApeKI GCWGC 8 cut(s) 534, 818, 1136, 1139, 1404, 1538, 1787, 2194
ApoI RAATTY 2 cut(s) 1658, 1739
AspA2I CCTAGG 1 cut(s) 82
AspLEI GCGC 3 cut(s) 65, 726, 1008
AspS9I GGNCC 2 cut(s) 128, 317
AsuC2I CCSGG 1 cut(s) 2146
AsuHPI GGTGA 2 cut(s) 980, 1186
AsuII TTCGAA 2 cut(s) 697, 1919
AvaI CYCGRG 2 cut(s) 825, 1580
AvrII CCTAGG 1 cut(s) 82
BalI TGGCCA 1 cut(s) 2023
BarI GAAGNNNNNNTAC 2 cut(s) 1323, 1355
BauI CACGAG 2 cut(s) 995, 2189
BbsI GAAGAC 2 cut(s) 251, 711
Bbv12I GWGCWC 2 cut(s) 984, 1581
BbvI GCAGC 8 cut(s) 546, 805, 1123, 1151, 1416, 1525, 1799, 2206
BccI CCATC 5 cut(s) 1181, 1405, 1465, 1687, 2009
BceAI ACGGC 2 cut(s) 142, 186
BciT130I CCWGG 2 cut(s) 731, 814
BciVI GTATCC 1 cut(s) 745
BcnI CCSGG 1 cut(s) 2146
BcoDI GTCTC 6 cut(s) 169, 803, 1296, 1767, 2014, 2135
BfaI CTAG 8 cut(s) 83, 455, 1301, 1308, 1401, 1634, 1829, 2120
BfmI CTRYAG 5 cut(s) 639, 1137, 1539, 1725, 1821
BfrI CTTAAG 1 cut(s) 1493
BfuAI ACCTGC 1 cut(s) 1795
BfuI GTATCC 1 cut(s) 745
BglII AGATCT 3 cut(s) 398, 1507, 1838
BisI GCNGC 9 cut(s) 535, 819, 1130, 1137, 1140, 1405, 1539, 1788, 2195
BlnI CCTAGG 1 cut(s) 82
BlsI GCNGC 9 cut(s) 536, 820, 1131, 1138, 1141, 1406, 1540, 1789, 2196
BmcAI AGTACT 1 cut(s) 1217
Bme1390I CCNGG 3 cut(s) 731, 814, 2146
BmeRI GACNNNNNGTC 1 cut(s) 2074
BmeT110I CYCGRG 2 cut(s) 825, 1580
BmgT120I GGNCC 2 cut(s) 128, 317
BmiI GGNNCC 5 cut(s) 319, 424, 831, 1047, 1607
BmrFI CCNGG 3 cut(s) 731, 814, 2146
BmsI GCATC 7 cut(s) 282, 402, 1192, 1525, 1984, 2060, 2161
BpiI GAAGAC 2 cut(s) 251, 711
BpmI CTGGAG 2 cut(s) 27, 2004
Bpu14I TTCGAA 2 cut(s) 697, 1919
BpuEI CTTGAG 4 cut(s) 1240, 2042, 2132, 2198
BpuMI CCSGG 1 cut(s) 2146
Bsa29I ATCGAT 1 cut(s) 285
BsaAI YACGTR 1 cut(s) 1523
BsaBI GATNNNNATC 1 cut(s) 1191
BsaHI GRCGYC 2 cut(s) 673, 708
BsaI GGTCTC 3 cut(s) 803, 2014, 2135
BsaJI CCNNGG 5 cut(s) 82, 717, 730, 813, 2130
Bsc4I CCNNNNNNNGG 2 cut(s) 240, 997
Bse1I ACTGG 4 cut(s) 566, 854, 1353, 1849
Bse3DI GCAATG 2 cut(s) 92, 711
Bse8I GATNNNNATC 1 cut(s) 1191
BseBI CCWGG 2 cut(s) 731, 814
BseCI ATCGAT 1 cut(s) 285
BseDI CCNNGG 5 cut(s) 82, 717, 730, 813, 2130
BseGI GGATG 6 cut(s) 249, 471, 948, 1375, 1491, 2176
BseJI GATNNNNATC 1 cut(s) 1191
BseLI CCNNNNNNNGG 2 cut(s) 240, 997
BseMI GCAATG 2 cut(s) 92, 711
BseMII CTCAG 6 cut(s) 906, 1050, 1301, 1379, 1665, 2084
BseNI ACTGG 4 cut(s) 566, 854, 1353, 1849
BseRI GAGGAG 1 cut(s) 1490
BseXI GCAGC 8 cut(s) 546, 805, 1123, 1151, 1416, 1525, 1799, 2206
BsgI GTGCAG 1 cut(s) 2213
Bsh1236I CGCG 2 cut(s) 1006, 1008
BshFI GGCC 3 cut(s) 129, 318, 2023
BshVI ATCGAT 1 cut(s) 285
BsiHKAI GWGCWC 2 cut(s) 984, 1581
BsiHKCI CYCGRG 2 cut(s) 825, 1580
BsiSI CCGG 2 cut(s) 60, 2146
BslFI GGGAC 2 cut(s) 747, 791
BslI CCNNNNNNNGG 2 cut(s) 240, 997
BsmAI GTCTC 6 cut(s) 169, 803, 1296, 1767, 2014, 2135
BsmFI GGGAC 2 cut(s) 747, 791
BsmI GAATGC 1 cut(s) 961
BsnI GGCC 3 cut(s) 129, 318, 2023
Bso31I GGTCTC 3 cut(s) 803, 2014, 2135
BsoBI CYCGRG 2 cut(s) 825, 1580
Bsp119I TTCGAA 2 cut(s) 697, 1919
Bsp1286I GDGCHC 2 cut(s) 984, 1581
Bsp143I GATC 7 cut(s) 398, 458, 937, 1324, 1507, 1689, 1838
BspACI CCGC 4 cut(s) 191, 650, 959, 1130
BspANI GGCC 3 cut(s) 129, 318, 2023
BspCNI CTCAG 6 cut(s) 905, 1049, 1300, 1378, 1666, 2085
BspDI ATCGAT 1 cut(s) 285
BspFNI CGCG 2 cut(s) 1006, 1008
BspLI GGNNCC 5 cut(s) 319, 424, 831, 1047, 1607
BspMAI CTGCAG 3 cut(s) 1141, 1543, 1825
BspMI ACCTGC 1 cut(s) 1795
BspPI GGATC 3 cut(s) 466, 1332, 1684
BspQI GCTCTTC 1 cut(s) 304
BspT104I TTCGAA 2 cut(s) 697, 1919
BspTI CTTAAG 1 cut(s) 1493
BspTNI GGTCTC 3 cut(s) 803, 2014, 2135
BsrDI GCAATG 2 cut(s) 92, 711
BsrI ACTGG 4 cut(s) 566, 854, 1353, 1849
BssECI CCNNGG 5 cut(s) 82, 717, 730, 813, 2130
BssMI GATC 7 cut(s) 398, 458, 937, 1324, 1507, 1689, 1838
BssNI GRCGYC 2 cut(s) 673, 708
BssSI CACGAG 2 cut(s) 995, 2189
BssT1I CCWWGG 2 cut(s) 82, 2130
Bst2BI CACGAG 2 cut(s) 995, 2189
Bst2UI CCWGG 2 cut(s) 731, 814
Bst4CI ACNGT 5 cut(s) 44, 757, 792, 1344, 1640
Bst6I CTCTTC 3 cut(s) 304, 633, 976
BstACI GRCGYC 2 cut(s) 673, 708
BstAFI CTTAAG 1 cut(s) 1493
BstBAI YACGTR 1 cut(s) 1523
BstBI TTCGAA 2 cut(s) 697, 1919
BstC8I GCNNGC 3 cut(s) 271, 1134, 2049
BstDEI CTNAG 6 cut(s) 892, 1036, 1287, 1365, 1674, 2093
BstF5I GGATG 6 cut(s) 249, 471, 948, 1375, 1491, 2176
BstFNI CGCG 2 cut(s) 1006, 1008
BstHHI GCGC 3 cut(s) 65, 726, 1008
BstKTI GATC 7 cut(s) 401, 461, 940, 1327, 1510, 1692, 1841
BstMAI GTCTC 6 cut(s) 169, 803, 1296, 1767, 2014, 2135
BstMBI GATC 7 cut(s) 398, 458, 937, 1324, 1507, 1689, 1838
BstNI CCWGG 2 cut(s) 731, 814
BstNSI RCATGY 2 cut(s) 878, 1029
BstSCI CCNGG 3 cut(s) 729, 812, 2144
BstSFI CTRYAG 5 cut(s) 639, 1137, 1539, 1725, 1821
BstSNI TACGTA 1 cut(s) 1523
BstUI CGCG 2 cut(s) 1006, 1008
BstV1I GCAGC 8 cut(s) 546, 805, 1123, 1151, 1416, 1525, 1799, 2206
BstV2I GAAGAC 2 cut(s) 251, 711
BstX2I RGATCY 4 cut(s) 398, 1324, 1507, 1838
BstYI RGATCY 4 cut(s) 398, 1324, 1507, 1838
Bsu15I ATCGAT 1 cut(s) 285
BsuI GTATCC 1 cut(s) 745
BsuRI GGCC 3 cut(s) 129, 318, 2023
BsuTUI ATCGAT 1 cut(s) 285
BtsCI GGATG 6 cut(s) 249, 471, 948, 1375, 1491, 2176
BtsI GCAGTG 2 cut(s) 1830, 2024
BtsIMutI CAGTG 5 cut(s) 445, 1346, 1830, 1856, 2024
BveI ACCTGC 1 cut(s) 1795
Cac8I GCNNGC 3 cut(s) 271, 1134, 2049
CfoI GCGC 3 cut(s) 65, 726, 1008
Cfr13I GGNCC 2 cut(s) 128, 317
ClaI ATCGAT 1 cut(s) 285
CseI GACGC 2 cut(s) 681, 1565
Csp6I GTAC 3 cut(s) 152, 1216, 1933
CspCI CAANNNNNGTGG 2 cut(s) 1073, 1108
CviQI GTAC 3 cut(s) 152, 1216, 1933
DdeI CTNAG 6 cut(s) 892, 1036, 1287, 1365, 1674, 2093
DpnI GATC 7 cut(s) 400, 460, 939, 1326, 1509, 1691, 1840
DpnII GATC 7 cut(s) 398, 458, 937, 1324, 1507, 1689, 1838
DraI TTTAAA 3 cut(s) 405, 787, 2004
DraIII CACNNNGTG 1 cut(s) 997
DriI GACNNNNNGTC 1 cut(s) 2074
EaeI YGGCCR 1 cut(s) 2021
Eam1104I CTCTTC 3 cut(s) 304, 633, 976
Eam1105I GACNNNNNGTC 1 cut(s) 2074
EarI CTCTTC 3 cut(s) 304, 633, 976
Eco105I TACGTA 1 cut(s) 1523
Eco130I CCWWGG 2 cut(s) 82, 2130
Eco31I GGTCTC 3 cut(s) 803, 2014, 2135
Eco57I CTGAAG 6 cut(s) 486, 666, 1217, 1287, 1733, 1827
Eco88I CYCGRG 2 cut(s) 825, 1580
EcoRII CCWGG 2 cut(s) 729, 812
EcoT14I CCWWGG 2 cut(s) 82, 2130
EcoT22I ATGCAT 1 cut(s) 1999
ErhI CCWWGG 2 cut(s) 82, 2130
FalI AAGNNNNNCTT 4 cut(s) 410, 442, 1051, 1083
FaqI GGGAC 2 cut(s) 747, 791
FauI CCCGC 2 cut(s) 184, 952
FblI GTMKAC 1 cut(s) 199
Fnu4HI GCNGC 9 cut(s) 535, 819, 1130, 1137, 1140, 1405, 1539, 1788, 2195
FokI GGATG 6 cut(s) 256, 478, 955, 1382, 1498, 2183
Fsp4HI GCNGC 9 cut(s) 535, 819, 1130, 1137, 1140, 1405, 1539, 1788, 2195
FspBI CTAG 8 cut(s) 83, 455, 1301, 1308, 1401, 1634, 1829, 2120
GlaI GCGC 3 cut(s) 64, 725, 1007
GluI GCNGC 9 cut(s) 535, 819, 1130, 1137, 1140, 1405, 1539, 1788, 2195
GsuI CTGGAG 2 cut(s) 27, 2004
HaeIII GGCC 3 cut(s) 129, 318, 2023
HapII CCGG 2 cut(s) 60, 2146
HgaI GACGC 2 cut(s) 681, 1565
HhaI GCGC 3 cut(s) 65, 726, 1008
Hin1I GRCGYC 2 cut(s) 673, 708
Hin6I GCGC 3 cut(s) 63, 724, 1006
HinP1I GCGC 3 cut(s) 63, 724, 1006
HincII GTYRAC 1 cut(s) 847
HindII GTYRAC 1 cut(s) 847
HindIII AAGCTT 1 cut(s) 2045
HpaII CCGG 2 cut(s) 60, 2146
HphI GGTGA 2 cut(s) 980, 1186
Hpy166II GTNNAC 4 cut(s) 200, 658, 847, 1935
Hpy188III TCNNGA 6 cut(s) 827, 1054, 1328, 1367, 1511, 2059
Hpy8I GTNNAC 4 cut(s) 200, 658, 847, 1935
HpyAV CCTTC 7 cut(s) 374, 570, 760, 1090, 1325, 1567, 1708
HpyCH4III ACNGT 5 cut(s) 44, 757, 792, 1344, 1640
HpyCH4IV ACGT 4 cut(s) 708, 1279, 1522, 1937
HpyF3I CTNAG 6 cut(s) 892, 1036, 1287, 1365, 1674, 2093
HpySE526I ACGT 4 cut(s) 708, 1279, 1522, 1937
Hsp92I GRCGYC 2 cut(s) 673, 708
HspAI GCGC 3 cut(s) 63, 724, 1006
Kzo9I GATC 7 cut(s) 398, 458, 937, 1324, 1507, 1689, 1838
LguI GCTCTTC 1 cut(s) 304
LmnI GCTCC 2 cut(s) 962, 1611
Lsp1109I GCAGC 8 cut(s) 546, 805, 1123, 1151, 1416, 1525, 1799, 2206
LweI GCATC 7 cut(s) 282, 402, 1192, 1525, 1984, 2060, 2161
MaeI CTAG 8 cut(s) 83, 455, 1301, 1308, 1401, 1634, 1829, 2120
MaeII ACGT 4 cut(s) 708, 1279, 1522, 1937
MaeIII GTNAC 6 cut(s) 77, 589, 986, 1344, 1518, 1812
MalI GATC 7 cut(s) 400, 460, 939, 1326, 1509, 1691, 1840
MboI GATC 7 cut(s) 398, 458, 937, 1324, 1507, 1689, 1838
MfeI CAATTG 1 cut(s) 1965
MflI RGATCY 4 cut(s) 398, 1324, 1507, 1838
MhlI GDGCHC 2 cut(s) 984, 1581
MlsI TGGCCA 1 cut(s) 2023
MluCI AATT 9 cut(s) 1178, 1272, 1658, 1685, 1697, 1739, 1878, 1926, 1965
MluNI TGGCCA 1 cut(s) 2023
MlyI GAGTC 1 cut(s) 962
MmeI TCCRAC 3 cut(s) 743, 932, 1633
Mox20I TGGCCA 1 cut(s) 2023
Mph1103I ATGCAT 1 cut(s) 1999
MscI TGGCCA 1 cut(s) 2023
MseI TTAA 9 cut(s) 404, 483, 786, 798, 947, 1181, 1446, 1494, 2003
MslI CAYNNNNRTG 3 cut(s) 466, 614, 681
Msp20I TGGCCA 1 cut(s) 2023
MspA1I CMGCKG 1 cut(s) 1790
MspCI CTTAAG 1 cut(s) 1493
MspI CCGG 2 cut(s) 60, 2146
MspR9I CCNGG 3 cut(s) 731, 814, 2146
MunI CAATTG 1 cut(s) 1965
Mva1269I GAATGC 1 cut(s) 961
MvaI CCWGG 2 cut(s) 731, 814
MvnI CGCG 2 cut(s) 1006, 1008
NciI CCSGG 1 cut(s) 2146
NdeII GATC 7 cut(s) 398, 458, 937, 1324, 1507, 1689, 1838
NlaIV GGNNCC 5 cut(s) 319, 424, 831, 1047, 1607
NmeAIII GCCGAG 1 cut(s) 742
NmuCI GTSAC 2 cut(s) 986, 1344
NsiI ATGCAT 1 cut(s) 1999
NspI RCATGY 2 cut(s) 878, 1029
NspV TTCGAA 2 cut(s) 697, 1919
PaeR7I CTCGAG 1 cut(s) 1580
PciSI GCTCTTC 1 cut(s) 304
PcsI WCGNNNNNNNCGW 2 cut(s) 132, 714
PctI GAATGC 1 cut(s) 961
PflMI CCANNNNNTGG 2 cut(s) 240, 997
PkrI GCNGC 9 cut(s) 536, 820, 1131, 1138, 1141, 1406, 1540, 1789, 2196
PleI GAGTC 1 cut(s) 962
PpsI GAGTC 1 cut(s) 962
Ppu21I YACGTR 1 cut(s) 1523
Psp6I CCWGG 2 cut(s) 729, 812
PspGI CCWGG 2 cut(s) 729, 812
PspN4I GGNNCC 5 cut(s) 319, 424, 831, 1047, 1607
PspPI GGNCC 2 cut(s) 128, 317
PspXI VCTCGAGB 1 cut(s) 1580
PstI CTGCAG 3 cut(s) 1141, 1543, 1825
PsuI RGATCY 4 cut(s) 398, 1324, 1507, 1838
PvuII CAGCTG 1 cut(s) 1790
RsaI GTAC 3 cut(s) 153, 1217, 1934
RsaNI GTAC 3 cut(s) 152, 1216, 1933
RseI CAYNNNNRTG 3 cut(s) 466, 614, 681
SapI GCTCTTC 1 cut(s) 304
SaqAI TTAA 9 cut(s) 404, 483, 786, 798, 947, 1181, 1446, 1494, 2003
SatI GCNGC 9 cut(s) 535, 819, 1130, 1137, 1140, 1405, 1539, 1788, 2195
Sau3AI GATC 7 cut(s) 398, 458, 937, 1324, 1507, 1689, 1838
Sau96I GGNCC 2 cut(s) 128, 317
ScaI AGTACT 1 cut(s) 1217
SchI GAGTC 1 cut(s) 962
ScrFI CCNGG 3 cut(s) 731, 814, 2146
SduI GDGCHC 2 cut(s) 984, 1581
SfaNI GCATC 7 cut(s) 282, 402, 1192, 1525, 1984, 2060, 2161
SfcI CTRYAG 5 cut(s) 639, 1137, 1539, 1725, 1821
Sfr274I CTCGAG 1 cut(s) 1580
SfuI TTCGAA 2 cut(s) 697, 1919
SlaI CTCGAG 1 cut(s) 1580
SmiMI CAYNNNNRTG 3 cut(s) 466, 614, 681
SmlI CTYRAG 6 cut(s) 1219, 1493, 1580, 2057, 2111, 2213
SmoI CTYRAG 6 cut(s) 1219, 1493, 1580, 2057, 2111, 2213
SnaBI TACGTA 1 cut(s) 1523
Sse9I AATT 9 cut(s) 1178, 1272, 1658, 1685, 1697, 1739, 1878, 1926, 1965
SsiI CCGC 4 cut(s) 191, 650, 959, 1130
SspMI CTAG 8 cut(s) 83, 455, 1301, 1308, 1401, 1634, 1829, 2120
StyD4I CCNGG 3 cut(s) 729, 812, 2144
StyI CCWWGG 2 cut(s) 82, 2130
TaaI ACNGT 5 cut(s) 44, 757, 792, 1344, 1640
TaiI ACGT 4 cut(s) 711, 1282, 1525, 1940
TaqI TCGA 6 cut(s) 285, 697, 1461, 1581, 1782, 1919
TasI AATT 9 cut(s) 1178, 1272, 1658, 1685, 1697, 1739, 1878, 1926, 1965
TatI WGTACW 1 cut(s) 1215
TauI GCSGC 1 cut(s) 1132
Tru1I TTAA 9 cut(s) 404, 483, 786, 798, 947, 1181, 1446, 1494, 2003
Tru9I TTAA 9 cut(s) 404, 483, 786, 798, 947, 1181, 1446, 1494, 2003
TscAI CASTG 5 cut(s) 445, 1353, 1830, 1856, 2031
TseFI GTSAC 2 cut(s) 986, 1344
TseI GCWGC 8 cut(s) 534, 818, 1136, 1139, 1404, 1538, 1787, 2194
Tsp45I GTSAC 2 cut(s) 986, 1344
TspDTI ATGAA 7 cut(s) 393, 1166, 1173, 1710, 1974, 2155, 2238
TspGWI ACGGA 2 cut(s) 1038, 1605
TspRI CASTG 5 cut(s) 445, 1353, 1830, 1856, 2031
Van91I CCANNNNNTGG 2 cut(s) 240, 997
Vha464I CTTAAG 1 cut(s) 1493
XapI RAATTY 2 cut(s) 1658, 1739
XceI RCATGY 2 cut(s) 878, 1029
XhoI CTCGAG 1 cut(s) 1580
XmaJI CCTAGG 1 cut(s) 82
XmiI GTMKAC 1 cut(s) 199
XspI CTAG 8 cut(s) 83, 455, 1301, 1308, 1401, 1634, 1829, 2120
ZraI GACGTC 1 cut(s) 709
ZrmI AGTACT 1 cut(s) 1217
Zsp2I ATGCAT 1 cut(s) 1999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.