No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G46430 AT5G59613 AT5G59613 |
| fragaria_vesca | FvH4_3g35530 |
| malus_domestica | MD01G1124900.v1.1 MD03G1096900.v1.1 MD11G1143400.v1.1 |
| prunus_persica | Prupe.2G232300_v2.0.a1 Prupe.6G081200_v2.0.a1 |
| pyrus_communis | pycom01g15120 |
| rosa_chinensis | RchiOBHm_Chr1g0340881 RchiOBHm_Chr1g0360701 RchiOBHm_Chr1g0367621 RchiOBHm_Chr2g0162431 RchiOBHm_Chr3g0463581 RchiOBHm_Chr5g0063751 RchiOBHm_Chr6g0265721 RchiOBHm_Chr7g0198591 RchiOBHm_Chr7g0223231 |
| rosa_laevigata | RLG00000035665 |
| rosa_multiflora | Rmu_sc0005638.1_g000001 Rmu_ssc0000309.1_g000040 |
| rosa_roxburghii | Rroxscaffold_1G00017110 Rroxscaffold_4G00320260 |
| rosa_rugosa | Rorug01G0461200 Rorug05G0359100 |
| rosa_samantha | Rh3AG123100 |
| rosa_wichuraiana | Rw2G027430 Rw4G009610 Rw5G037380 Rw5G039260 Rw6G010810 Rw6G019310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 108 |
| AclI | AACGTT | 1 cut(s) | 49 |
| AclWI | GGATC | 1 cut(s) | 8 |
| AcoI | YGGCCR | 2 cut(s) | 20, 56 |
| AgeI | ACCGGT | 1 cut(s) | 68 |
| AgsI | TTSAA | 1 cut(s) | 34 |
| AluBI | AGCT | 1 cut(s) | 103 |
| AluI | AGCT | 1 cut(s) | 103 |
| AlwI | GGATC | 1 cut(s) | 8 |
| AoxI | GGCC | 2 cut(s) | 20, 56 |
| AsiGI | ACCGGT | 1 cut(s) | 68 |
| AsuHPI | GGTGA | 3 cut(s) | 58, 73, 88 |
| BalI | TGGCCA | 2 cut(s) | 22, 58 |
| BceAI | ACGGC | 1 cut(s) | 62 |
| BmsI | GCATC | 1 cut(s) | 118 |
| BsaJI | CCNNGG | 1 cut(s) | 17 |
| BsaWI | WCCGGW | 1 cut(s) | 68 |
| Bse118I | RCCGGY | 2 cut(s) | 68, 83 |
| Bse1I | ACTGG | 1 cut(s) | 23 |
| BseDI | CCNNGG | 1 cut(s) | 17 |
| BseMII | CTCAG | 1 cut(s) | 111 |
| BseNI | ACTGG | 1 cut(s) | 23 |
| BshFI | GGCC | 2 cut(s) | 22, 58 |
| BshTI | ACCGGT | 1 cut(s) | 68 |
| BsiSI | CCGG | 3 cut(s) | 69, 84, 111 |
| BsnI | GGCC | 2 cut(s) | 22, 58 |
| Bsp143I | GATC | 1 cut(s) | 13 |
| Bsp19I | CCATGG | 1 cut(s) | 17 |
| BspACI | CCGC | 1 cut(s) | 108 |
| BspANI | GGCC | 2 cut(s) | 22, 58 |
| BspCNI | CTCAG | 1 cut(s) | 112 |
| BspPI | GGATC | 1 cut(s) | 8 |
| BsrFI | RCCGGY | 2 cut(s) | 68, 83 |
| BsrI | ACTGG | 1 cut(s) | 23 |
| BssAI | RCCGGY | 2 cut(s) | 68, 83 |
| BssECI | CCNNGG | 1 cut(s) | 17 |
| BssMI | GATC | 1 cut(s) | 13 |
| BssT1I | CCWWGG | 1 cut(s) | 17 |
| BstC8I | GCNNGC | 1 cut(s) | 56 |
| BstDEI | CTNAG | 2 cut(s) | 120, 132 |
| BstDSI | CCRYGG | 1 cut(s) | 17 |
| BstKTI | GATC | 1 cut(s) | 16 |
| BstMBI | GATC | 1 cut(s) | 13 |
| BsuRI | GGCC | 2 cut(s) | 22, 58 |
| BtgI | CCRYGG | 1 cut(s) | 17 |
| BtsIMutI | CAGTG | 2 cut(s) | 30, 117 |
| Cac8I | GCNNGC | 1 cut(s) | 56 |
| Cfr10I | RCCGGY | 2 cut(s) | 68, 83 |
| CspAI | ACCGGT | 1 cut(s) | 68 |
| CviAII | CATG | 1 cut(s) | 18 |
| CviJI | RGCY | 3 cut(s) | 22, 58, 103 |
| CviKI_1 | RGCY | 3 cut(s) | 22, 58, 103 |
| DdeI | CTNAG | 2 cut(s) | 120, 132 |
| DpnI | GATC | 1 cut(s) | 15 |
| DpnII | GATC | 1 cut(s) | 13 |
| EaeI | YGGCCR | 2 cut(s) | 20, 56 |
| Eco130I | CCWWGG | 1 cut(s) | 17 |
| EcoT14I | CCWWGG | 1 cut(s) | 17 |
| ErhI | CCWWGG | 1 cut(s) | 17 |
| FaeI | CATG | 1 cut(s) | 21 |
| FaiI | YATR | 1 cut(s) | 19 |
| FatI | CATG | 1 cut(s) | 17 |
| HaeIII | GGCC | 2 cut(s) | 22, 58 |
| HapII | CCGG | 3 cut(s) | 69, 84, 111 |
| Hin1II | CATG | 1 cut(s) | 21 |
| HinfI | GANTC | 1 cut(s) | 114 |
| HpaII | CCGG | 3 cut(s) | 69, 84, 111 |
| HphI | GGTGA | 3 cut(s) | 58, 73, 88 |
| Hpy188III | TCNNGA | 1 cut(s) | 34 |
| HpyAV | CCTTC | 1 cut(s) | 156 |
| HpyCH4IV | ACGT | 1 cut(s) | 49 |
| HpyF3I | CTNAG | 2 cut(s) | 120, 132 |
| HpySE526I | ACGT | 1 cut(s) | 49 |
| Hsp92II | CATG | 1 cut(s) | 21 |
| Kzo9I | GATC | 1 cut(s) | 13 |
| LpnPI | CCDG | 6 cut(s) | 36, 40, 82, 97, 124, 164 |
| LweI | GCATC | 1 cut(s) | 118 |
| MaeII | ACGT | 1 cut(s) | 49 |
| MaeIII | GTNAC | 1 cut(s) | 79 |
| MalI | GATC | 1 cut(s) | 15 |
| MboI | GATC | 1 cut(s) | 13 |
| MboII | GAAGA | 2 cut(s) | 22, 137 |
| MlsI | TGGCCA | 2 cut(s) | 22, 58 |
| MluNI | TGGCCA | 2 cut(s) | 22, 58 |
| MlyI | GAGTC | 1 cut(s) | 108 |
| MnlI | CCTC | 2 cut(s) | 74, 115 |
| Mox20I | TGGCCA | 2 cut(s) | 22, 58 |
| MscI | TGGCCA | 2 cut(s) | 22, 58 |
| Msp20I | TGGCCA | 2 cut(s) | 22, 58 |
| MspI | CCGG | 3 cut(s) | 69, 84, 111 |
| NcoI | CCATGG | 1 cut(s) | 17 |
| NdeII | GATC | 1 cut(s) | 13 |
| NlaIII | CATG | 1 cut(s) | 21 |
| NmuCI | GTSAC | 1 cut(s) | 79 |
| PinAI | ACCGGT | 1 cut(s) | 68 |
| PleI | GAGTC | 1 cut(s) | 108 |
| PpsI | GAGTC | 1 cut(s) | 108 |
| Psp1406I | AACGTT | 1 cut(s) | 49 |
| Sau3AI | GATC | 1 cut(s) | 13 |
| SchI | GAGTC | 1 cut(s) | 108 |
| SetI | ASST | 4 cut(s) | 8, 52, 105, 167 |
| SfaNI | GCATC | 1 cut(s) | 118 |
| SgrAI | CRCCGGYG | 1 cut(s) | 83 |
| SsiI | CCGC | 1 cut(s) | 108 |
| StyI | CCWWGG | 1 cut(s) | 17 |
| TaiI | ACGT | 1 cut(s) | 52 |
| TaqI | TCGA | 1 cut(s) | 12 |
| TscAI | CASTG | 2 cut(s) | 30, 124 |
| TseFI | GTSAC | 1 cut(s) | 79 |
| Tsp45I | GTSAC | 1 cut(s) | 79 |
| TspRI | CASTG | 2 cut(s) | 30, 124 |