Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004115

Physical Location & Seq

Genomic Coordinates Reverse (-)

55461240 .. 55465849

Gene Structure 4610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0461200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1266 bp

ATGATTTCGAATCCGAGTCTGGTGTACTACGCGTGCATTGCCCAGAAGGAAACGATTCTCGGCGAGATTGCGAAGGAGCCCGGAATCGGAGCCCTAGCTCAGAAATGCATTGCGAAAACCCCACTGCACCACTCCCTGTACACCCACACCGTCAGAAAGCGGACCTACGTGTTCTCGATCGTCGACCCTTTCGTGTTCTTCGGCATTTTCGATCAAGATCTCGATCAGTCCGAGGCGCTTGCGTTCTTGAATCGATTGAGATGCGATTTCGAGAAGGTGAATGGAAATGGTGGAGAATTTGAATCGCATTGTTTTCAAGCTGAGTTTGATTCGATTATGAGGGAGGTGATGGCGTCGGAGATGGATTTGGCGGCGTCGCCGCCGGCGAGCCGGAATCTGAGCATGGATTCGAGTAGTAGTAAAGGGAAGAAATTGGTGCTGGCGCCGCTGCTGGGGAACCAGGGGTTGAAAAAGAAGAAGAGATTGTCTGGGGAGGTGAATGGGGAGCTGTGCAAAGATGTGGTGATGAGCACTATGGAGAAGAAGCTGGATGTGGGTGAGGATGGAAGGGATTTCGCAATGCCGGCGCTGAAGAGTGGGGGTTTGCATCCATGTGAGCGGCAGAAGGCCAAGCAGTCACGGTCTATATTTCCTTTTTCATGGCATGGAGAAGATATCATAATTTTCAAAAGAGGGGTAACCATGGCCCTGCACTCAGGGACGGATCGTTTTTCACCACTAATGTCGACTCTTCATCATCATCATCATCATCGCCTGAGAGGCGTGGAATCAAAAGACGGTTTGATGTACCTCCTGTTGGACCCCTGCCCACGCCATCTTTTCCTTCTAGGCCCTTCTAGGCCAGTGCAGGGACCGTTCCTCAGAGACGGGAGCTTCAAAAGAATGAAAGATTGCGACTTGGCCCATATTCTGGTGAGGGAGAATATTGAAGTGAGGAGGCTTGCATGTGCAGCTCCTCCTCCTACCCAAGAGGCAATGCCATTGGCATCCGTCAGAACTGGGAGCTCCCAACCCAATCTTCAAGTTCCTACTACCAATGCGACCTCTACTGTTCCATCACTTTACTCATCCTCCAGTTCAAGTAACAAAGAGCTTAAACAGATGGGGCTACCAATATCTTTTGGTGCTAAAAAGTCGGGGCTGGGAAGTGAAAGACTGATTGGGCCAGAGTATGGATTAAAATGTTCAAATGAGGATTTCACCAATCCCTTCTTTCTTAATTTTTTTGGTCTCGCTGAAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0016020 GO:0019866 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

421

Amino Acids

46.53

Weight (kDa)

8.7

Isoelectric Point (pI)

50.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004115)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46430 AT5G59613 AT5G59613
fragaria_vesca	FvH4_3g35530
malus_domestica	MD01G1124900.v1.1 MD03G1096900.v1.1 MD11G1143400.v1.1
prunus_persica	Prupe.2G232300_v2.0.a1 Prupe.6G081200_v2.0.a1
pyrus_communis	pycom01g15120
rosa_chinensis	RchiOBHm_Chr1g0340881 RchiOBHm_Chr1g0360701 RchiOBHm_Chr1g0367621 RchiOBHm_Chr2g0162431 RchiOBHm_Chr3g0463581 RchiOBHm_Chr5g0063751 RchiOBHm_Chr6g0265721 RchiOBHm_Chr7g0198591 RchiOBHm_Chr7g0223231
rosa_laevigata	RLG00000035665
rosa_multiflora	Rmu_sc0005638.1_g000001 Rmu_ssc0000309.1_g000040
rosa_roxburghii	Rroxscaffold_1G00017110 Rroxscaffold_4G00320260
rosa_rugosa	Rorug01G0461200 Rorug05G0359100
rosa_samantha	Rh3AG123100
rosa_wichuraiana	Rw2G027430 Rw4G009610 Rw5G037380 Rw5G039260 Rw6G010810 Rw6G019310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	442
AccB7I	CCANNNNNTGG	2 cut(s)	931, 1193
AccBSI	CCGCTC	1 cut(s)	619
AccI	GTMKAC	2 cut(s)	183, 746
AccII	CGCG	1 cut(s)	32
AciI	CCGC	5 cut(s)	160, 371, 380, 446, 619
AclWI	GGATC	1 cut(s)	732
AcsI	RAATTY	1 cut(s)	296
AcuI	CTGAAG	1 cut(s)	611
AcyI	GRCGYC	3 cut(s)	353, 374, 443
AfaI	GTAC	3 cut(s)	26, 140, 809
AfiI	CCNNNNNNNGG	6 cut(s)	86, 452, 817, 869, 931, 1193
AflIII	ACRYGT	2 cut(s)	30, 168
AjnI	CCWGG	1 cut(s)	459
AjuI	GAANNNNNNNTTGG	4 cut(s)	1023, 1055, 1164, 1196
AluBI	AGCT	8 cut(s)	98, 320, 508, 547, 894, 974, 1026, 1114
AluI	AGCT	8 cut(s)	98, 320, 508, 547, 894, 974, 1026, 1114
Alw21I	GWGCWC	2 cut(s)	533, 1028
Alw26I	GTCTC	2 cut(s)	879, 1256
AlwI	GGATC	1 cut(s)	732
AoxI	GGCC	6 cut(s)	627, 705, 850, 860, 921, 1184
ApeKI	GCWGC	2 cut(s)	448, 971
ApoI	RAATTY	1 cut(s)	296
Asp700I	GAANNNNTTC	1 cut(s)	54
AspLEI	GCGC	3 cut(s)	238, 445, 589
AspS9I	GGNCC	7 cut(s)	162, 706, 820, 851, 872, 922, 1184
AsuC2I	CCSGG	1 cut(s)	81
AsuHPI	GGTGA	8 cut(s)	289, 358, 508, 535, 569, 726, 946, 1213
AsuII	TTCGAA	1 cut(s)	8
AvaII	GGWCC	3 cut(s)	162, 820, 872
BanI	GGYRCC	1 cut(s)	442
BanII	GRGCYC	3 cut(s)	81, 94, 1028
Bbv12I	GWGCWC	2 cut(s)	533, 1028
BbvI	GCAGC	2 cut(s)	435, 983
BccI	CCATC	6 cut(s)	343, 355, 557, 843, 1084, 1117
BcgI	CGANNNNNNTGC	4 cut(s)	221, 243, 255, 277
BciT130I	CCWGG	1 cut(s)	461
BcnI	CCSGG	1 cut(s)	81
BcoDI	GTCTC	2 cut(s)	879, 1256
BfaI	CTAG	3 cut(s)	95, 848, 858
BfoI	RGCGCY	3 cut(s)	239, 446, 590
BglI	GCCNNNNNGGC	1 cut(s)	780
BglII	AGATCT	1 cut(s)	217
BisI	GCNGC	6 cut(s)	372, 380, 446, 449, 620, 972
BlsI	GCNGC	6 cut(s)	373, 381, 447, 450, 621, 973
Bme1390I	CCNGG	2 cut(s)	81, 461
Bme18I	GGWCC	3 cut(s)	162, 820, 872
BmgT120I	GGNCC	7 cut(s)	162, 706, 820, 851, 872, 922, 1184
BmiI	GGNNCC	6 cut(s)	78, 91, 444, 458, 822, 873
BmrFI	CCNGG	2 cut(s)	81, 461
BmrI	ACTGGG	1 cut(s)	1029
BmsI	GCATC	3 cut(s)	251, 616, 1016
BmuI	ACTGGG	1 cut(s)	1029
BpmI	CTGGAG	1 cut(s)	1078
Bpu14I	TTCGAA	1 cut(s)	8
BpuMI	CCSGG	1 cut(s)	81
Bsa29I	ATCGAT	1 cut(s)	253
BsaAI	YACGTR	1 cut(s)	169
BsaBI	GATNNNNATC	2 cut(s)	216, 222
BsaHI	GRCGYC	3 cut(s)	353, 374, 443
BsaI	GGTCTC	1 cut(s)	1256
BsaJI	CCNNGG	3 cut(s)	231, 460, 702
BsaXI	ACNNNNNCTCC	2 cut(s)	1076, 1106
Bsc4I	CCNNNNNNNGG	6 cut(s)	86, 452, 817, 869, 931, 1193
Bse118I	RCCGGY	2 cut(s)	382, 583
Bse1I	ACTGG	3 cut(s)	863, 1024, 1095
Bse3DI	GCAATG	4 cut(s)	36, 108, 585, 1002
Bse8I	GATNNNNATC	2 cut(s)	216, 222
BseBI	CCWGG	1 cut(s)	461
BseCI	ATCGAT	1 cut(s)	253
BseDI	CCNNGG	3 cut(s)	231, 460, 702
BseGI	GGATG	5 cut(s)	556, 568, 607, 1007, 1088
BseJI	GATNNNNATC	2 cut(s)	216, 222
BseLI	CCNNNNNNNGG	6 cut(s)	86, 452, 817, 869, 931, 1193
BseMI	GCAATG	4 cut(s)	36, 108, 585, 1002
BseMII	CTCAG	6 cut(s)	113, 312, 389, 729, 767, 895
BseNI	ACTGG	3 cut(s)	863, 1024, 1095
BseRI	GAGGAG	3 cut(s)	966, 969, 970
BseXI	GCAGC	2 cut(s)	435, 983
BseYI	CCCAGC	2 cut(s)	451, 1162
BsgI	GTGCAG	4 cut(s)	110, 695, 887, 990
Bsh1236I	CGCG	1 cut(s)	32
Bsh1285I	CGRYCG	1 cut(s)	180
BshFI	GGCC	6 cut(s)	629, 707, 852, 862, 923, 1186
BshNI	GGYRCC	1 cut(s)	442
BshVI	ATCGAT	1 cut(s)	253
BsiEI	CGRYCG	1 cut(s)	180
BsiHKAI	GWGCWC	2 cut(s)	533, 1028
BsiSI	CCGG	4 cut(s)	81, 383, 391, 584
BslFI	GGGAC	2 cut(s)	733, 885
BslI	CCNNNNNNNGG	6 cut(s)	86, 452, 817, 869, 931, 1193
BsmAI	GTCTC	2 cut(s)	879, 1256
BsmBI	CGTCTC	1 cut(s)	879
BsmFI	GGGAC	2 cut(s)	733, 885
BsnI	GGCC	6 cut(s)	629, 707, 852, 862, 923, 1186
Bso31I	GGTCTC	1 cut(s)	1256
Bsp119I	TTCGAA	1 cut(s)	8
Bsp1286I	GDGCHC	4 cut(s)	81, 94, 533, 1028
Bsp1407I	TGTACA	1 cut(s)	138
Bsp143I	GATC	5 cut(s)	177, 211, 217, 223, 724
Bsp19I	CCATGG	1 cut(s)	702
BspACI	CCGC	5 cut(s)	160, 371, 380, 446, 619
BspANI	GGCC	6 cut(s)	629, 707, 852, 862, 923, 1186
BspCNI	CTCAG	6 cut(s)	112, 313, 390, 728, 768, 894
BspDI	ATCGAT	1 cut(s)	253
BspFNI	CGCG	1 cut(s)	32
BspLI	GGNNCC	6 cut(s)	78, 91, 444, 458, 822, 873
BspPI	GGATC	1 cut(s)	732
BspT104I	TTCGAA	1 cut(s)	8
BspT107I	GGYRCC	1 cut(s)	442
BspTNI	GGTCTC	1 cut(s)	1256
BsrBI	CCGCTC	1 cut(s)	619
BsrDI	GCAATG	4 cut(s)	36, 108, 585, 1002
BsrFI	RCCGGY	2 cut(s)	382, 583
BsrGI	TGTACA	1 cut(s)	138
BsrI	ACTGG	3 cut(s)	863, 1024, 1095
BssAI	RCCGGY	2 cut(s)	382, 583
BssECI	CCNNGG	3 cut(s)	231, 460, 702
BssMI	GATC	5 cut(s)	177, 211, 217, 223, 724
BssNI	GRCGYC	3 cut(s)	353, 374, 443
BssT1I	CCWWGG	1 cut(s)	702
Bst2UI	CCWGG	1 cut(s)	461
Bst4CI	ACNGT	5 cut(s)	151, 642, 800, 876, 1072
Bst6I	CTCTTC	3 cut(s)	473, 587, 756
BstACI	GRCGYC	3 cut(s)	353, 374, 443
BstAUI	TGTACA	1 cut(s)	138
BstBAI	YACGTR	1 cut(s)	169
BstBI	TTCGAA	1 cut(s)	8
BstC8I	GCNNGC	7 cut(s)	34, 240, 384, 388, 441, 585, 963
BstDEI	CTNAG	6 cut(s)	99, 321, 398, 715, 776, 881
BstDSI	CCRYGG	1 cut(s)	702
BstEII	GGTNACC	1 cut(s)	697
BstF5I	GGATG	5 cut(s)	556, 568, 607, 1007, 1088
BstFNI	CGCG	1 cut(s)	32
BstH2I	RGCGCY	3 cut(s)	239, 446, 590
BstHHI	GCGC	3 cut(s)	238, 445, 589
BstKTI	GATC	5 cut(s)	180, 214, 220, 226, 727
BstMAI	GTCTC	2 cut(s)	879, 1256
BstMBI	GATC	5 cut(s)	177, 211, 217, 223, 724
BstMCI	CGRYCG	1 cut(s)	180
BstMWI	GCNNNNNNNGC	5 cut(s)	38, 445, 584, 780, 971
BstNI	CCWGG	1 cut(s)	461
BstNSI	RCATGY	1 cut(s)	969
BstPI	GGTNACC	1 cut(s)	697
BstSCI	CCNGG	2 cut(s)	79, 459
BstUI	CGCG	1 cut(s)	32
BstV1I	GCAGC	2 cut(s)	435, 983
BstX2I	RGATCY	1 cut(s)	217
BstYI	RGATCY	1 cut(s)	217
Bsu15I	ATCGAT	1 cut(s)	253
BsuRI	GGCC	6 cut(s)	629, 707, 852, 862, 923, 1186
BsuTUI	ATCGAT	1 cut(s)	253
BtgI	CCRYGG	1 cut(s)	702
BtgZI	GCGATG	1 cut(s)	755
BtsCI	GGATG	5 cut(s)	556, 568, 607, 1007, 1088
BtsI	GCAGTG	1 cut(s)	122
BtsIMutI	CAGTG	2 cut(s)	122, 870
Cac8I	GCNNGC	7 cut(s)	34, 240, 384, 388, 441, 585, 963
CfoI	GCGC	3 cut(s)	238, 445, 589
Cfr10I	RCCGGY	2 cut(s)	382, 583
Cfr13I	GGNCC	7 cut(s)	162, 706, 820, 851, 872, 922, 1184
ClaI	ATCGAT	1 cut(s)	253
CseI	GACGC	2 cut(s)	342, 363
Csp6I	GTAC	3 cut(s)	25, 139, 808
CviAII	CATG	6 cut(s)	403, 612, 660, 665, 703, 966
CviQI	GTAC	3 cut(s)	25, 139, 808
DdeI	CTNAG	6 cut(s)	99, 321, 398, 715, 776, 881
DinI	GGCGCC	1 cut(s)	444
DpnI	GATC	5 cut(s)	179, 213, 219, 225, 726
DpnII	GATC	5 cut(s)	177, 211, 217, 223, 724
Eam1104I	CTCTTC	3 cut(s)	473, 587, 756
EarI	CTCTTC	3 cut(s)	473, 587, 756
Ecl136II	GAGCTC	1 cut(s)	1026
Eco130I	CCWWGG	1 cut(s)	702
Eco24I	GRGCYC	3 cut(s)	81, 94, 1028
Eco31I	GGTCTC	1 cut(s)	1256
Eco32I	GATATC	1 cut(s)	676
Eco47I	GGWCC	3 cut(s)	162, 820, 872
Eco53kI	GAGCTC	1 cut(s)	1026
Eco57I	CTGAAG	1 cut(s)	611
Eco91I	GGTNACC	1 cut(s)	697
EcoICRI	GAGCTC	1 cut(s)	1026
EcoO109I	RGGNCCY	1 cut(s)	851
EcoO65I	GGTNACC	1 cut(s)	697
EcoRII	CCWGG	1 cut(s)	459
EcoRV	GATATC	1 cut(s)	676
EcoT14I	CCWWGG	1 cut(s)	702
EcoT22I	ATGCAT	1 cut(s)	110
EcoT38I	GRGCYC	3 cut(s)	81, 94, 1028
EgeI	GGCGCC	1 cut(s)	444
EheI	GGCGCC	1 cut(s)	444
ErhI	CCWWGG	1 cut(s)	702
Esp3I	CGTCTC	1 cut(s)	879
FaeI	CATG	6 cut(s)	406, 615, 663, 668, 706, 969
FaqI	GGGAC	2 cut(s)	733, 885
FatI	CATG	6 cut(s)	402, 611, 659, 664, 702, 965
FblI	GTMKAC	2 cut(s)	183, 746
Fnu4HI	GCNGC	6 cut(s)	372, 380, 446, 449, 620, 972
FokI	GGATG	5 cut(s)	563, 575, 594, 994, 1075
FriOI	GRGCYC	3 cut(s)	81, 94, 1028
Fsp4HI	GCNGC	6 cut(s)	372, 380, 446, 449, 620, 972
FspBI	CTAG	3 cut(s)	95, 848, 858
GlaI	GCGC	3 cut(s)	237, 444, 588
GluI	GCNGC	6 cut(s)	372, 380, 446, 449, 620, 972
GsaI	CCCAGC	2 cut(s)	455, 1166
GsuI	CTGGAG	1 cut(s)	1078
HaeII	RGCGCY	3 cut(s)	239, 446, 590
HaeIII	GGCC	6 cut(s)	629, 707, 852, 862, 923, 1186
HapII	CCGG	4 cut(s)	81, 383, 391, 584
HgaI	GACGC	2 cut(s)	342, 363
HhaI	GCGC	3 cut(s)	238, 445, 589
Hin1I	GRCGYC	3 cut(s)	353, 374, 443
Hin1II	CATG	6 cut(s)	406, 615, 663, 668, 706, 969
Hin6I	GCGC	3 cut(s)	236, 443, 587
HinP1I	GCGC	3 cut(s)	236, 443, 587
HincII	GTYRAC	2 cut(s)	184, 747
HindII	GTYRAC	2 cut(s)	184, 747
HpaII	CCGG	4 cut(s)	81, 383, 391, 584
HphI	GGTGA	8 cut(s)	289, 358, 508, 535, 569, 726, 946, 1213
Hpy166II	GTNNAC	4 cut(s)	25, 141, 184, 747
Hpy188I	TCNGA	9 cut(s)	15, 89, 102, 155, 232, 358, 399, 884, 1016
Hpy188III	TCNNGA	5 cut(s)	175, 215, 221, 247, 271
Hpy8I	GTNNAC	4 cut(s)	25, 141, 184, 747
Hpy99I	CGWCG	3 cut(s)	185, 358, 379
HpyAV	CCTTC	8 cut(s)	40, 67, 268, 561, 619, 854, 864, 1240
HpyCH4III	ACNGT	5 cut(s)	151, 642, 800, 876, 1072
HpyCH4IV	ACGT	1 cut(s)	168
HpyCH4V	TGCA	9 cut(s)	36, 108, 127, 513, 607, 712, 868, 965, 971
HpyF10VI	GCNNNNNNNGC	5 cut(s)	38, 445, 584, 780, 971
HpyF3I	CTNAG	6 cut(s)	99, 321, 398, 715, 776, 881
HpySE526I	ACGT	1 cut(s)	168
Hsp92I	GRCGYC	3 cut(s)	353, 374, 443
Hsp92II	CATG	6 cut(s)	406, 615, 663, 668, 706, 969
HspAI	GCGC	3 cut(s)	236, 443, 587
KasI	GGCGCC	1 cut(s)	442
KroI	GCCGGC	2 cut(s)	382, 583
KroNI	GCCGGC	2 cut(s)	384, 585
Kzo9I	GATC	5 cut(s)	177, 211, 217, 223, 724
LmnI	GCTCC	7 cut(s)	76, 89, 505, 891, 979, 1023, 1031
Lsp1109I	GCAGC	2 cut(s)	435, 983
LweI	GCATC	3 cut(s)	251, 616, 1016
MaeI	CTAG	3 cut(s)	95, 848, 858
MaeII	ACGT	1 cut(s)	168
MaeIII	GTNAC	3 cut(s)	636, 697, 1103
MalI	GATC	5 cut(s)	179, 213, 219, 225, 726
MbiI	CCGCTC	1 cut(s)	619
MboI	GATC	5 cut(s)	177, 211, 217, 223, 724
MboII	GAAGA	9 cut(s)	190, 439, 487, 490, 553, 604, 683, 743, 1031
MflI	RGATCY	1 cut(s)	217
MhlI	GDGCHC	4 cut(s)	81, 94, 533, 1028
MluCI	AATT	4 cut(s)	296, 431, 681, 1240
MluI	ACGCGT	1 cut(s)	30
Mly113I	GGCGCC	1 cut(s)	443
MlyI	GAGTC	2 cut(s)	25, 742
MmeI	TCCRAC	2 cut(s)	336, 798
Mph1103I	ATGCAT	1 cut(s)	110
MreI	CGCCGGCG	1 cut(s)	382
MroNI	GCCGGC	2 cut(s)	382, 583
MroXI	GAANNNNTTC	1 cut(s)	54
MseI	TTAA	4 cut(s)	1116, 1199, 1239, 1264
MslI	CAYNNNNRTG	1 cut(s)	612
MspA1I	CMGCKG	1 cut(s)	448
MspI	CCGG	4 cut(s)	81, 383, 391, 584
MspR9I	CCNGG	2 cut(s)	81, 461
MvaI	CCWGG	1 cut(s)	461
MvnI	CGCG	1 cut(s)	32
MwoI	GCNNNNNNNGC	5 cut(s)	38, 445, 584, 780, 971
NaeI	GCCGGC	2 cut(s)	384, 585
NarI	GGCGCC	1 cut(s)	443
NciI	CCSGG	1 cut(s)	81
NcoI	CCATGG	1 cut(s)	702
NdeII	GATC	5 cut(s)	177, 211, 217, 223, 724
NgoMIV	GCCGGC	2 cut(s)	382, 583
NlaIII	CATG	6 cut(s)	406, 615, 663, 668, 706, 969
NlaIV	GGNNCC	6 cut(s)	78, 91, 444, 458, 822, 873
NmeAIII	GCCGAG	1 cut(s)	39
NmuCI	GTSAC	1 cut(s)	636
NsiI	ATGCAT	1 cut(s)	110
NspI	RCATGY	1 cut(s)	969
NspV	TTCGAA	1 cut(s)	8
PcsI	WCGNNNNNNNCGW	4 cut(s)	189, 207, 228, 383
PdiI	GCCGGC	2 cut(s)	384, 585
PdmI	GAANNNNTTC	1 cut(s)	54
PfeI	GAWTC	9 cut(s)	10, 55, 84, 250, 302, 329, 394, 407, 788
PflMI	CCANNNNNTGG	2 cut(s)	931, 1193
PkrI	GCNGC	6 cut(s)	373, 381, 447, 450, 621, 973
Ple19I	CGATCG	1 cut(s)	180
PleI	GAGTC	2 cut(s)	24, 742
PluTI	GGCGCC	1 cut(s)	446
PpsI	GAGTC	2 cut(s)	24, 742
Ppu21I	YACGTR	1 cut(s)	169
Psp124BI	GAGCTC	1 cut(s)	1028
Psp6I	CCWGG	1 cut(s)	459
PspEI	GGTNACC	1 cut(s)	697
PspFI	CCCAGC	2 cut(s)	451, 1162
PspGI	CCWGG	1 cut(s)	459
PspN4I	GGNNCC	6 cut(s)	78, 91, 444, 458, 822, 873
PspPI	GGNCC	7 cut(s)	162, 706, 820, 851, 872, 922, 1184
PsuI	RGATCY	1 cut(s)	217
PvuI	CGATCG	1 cut(s)	180
RsaI	GTAC	3 cut(s)	26, 140, 809
RsaNI	GTAC	3 cut(s)	25, 139, 808
RseI	CAYNNNNRTG	1 cut(s)	612
SacI	GAGCTC	1 cut(s)	1028
SalI	GTCGAC	2 cut(s)	182, 745
SaqAI	TTAA	4 cut(s)	1116, 1199, 1239, 1264
SatI	GCNGC	6 cut(s)	372, 380, 446, 449, 620, 972
Sau3AI	GATC	5 cut(s)	177, 211, 217, 223, 724
Sau96I	GGNCC	7 cut(s)	162, 706, 820, 851, 872, 922, 1184
SchI	GAGTC	2 cut(s)	25, 742
ScrFI	CCNGG	2 cut(s)	81, 461
SduI	GDGCHC	4 cut(s)	81, 94, 533, 1028
SfaNI	GCATC	3 cut(s)	251, 616, 1016
SfoI	GGCGCC	1 cut(s)	444
SfuI	TTCGAA	1 cut(s)	8
SgrAI	CRCCGGYG	1 cut(s)	382
SinI	GGWCC	3 cut(s)	162, 820, 872
SmiMI	CAYNNNNRTG	1 cut(s)	612
Sse9I	AATT	4 cut(s)	296, 431, 681, 1240
SsiI	CCGC	5 cut(s)	160, 371, 380, 446, 619
SspDI	GGCGCC	1 cut(s)	442
SspI	AATATT	1 cut(s)	946
SspMI	CTAG	3 cut(s)	95, 848, 858
SstI	GAGCTC	1 cut(s)	1028
StyD4I	CCNGG	2 cut(s)	79, 459
StyI	CCWWGG	1 cut(s)	702
TaaI	ACNGT	5 cut(s)	151, 642, 800, 876, 1072
TaiI	ACGT	1 cut(s)	171
TasI	AATT	4 cut(s)	296, 431, 681, 1240
TatI	WGTACW	2 cut(s)	24, 138
TauI	GCSGC	4 cut(s)	374, 382, 448, 622
TfiI	GAWTC	9 cut(s)	10, 55, 84, 250, 302, 329, 394, 407, 788
Tru1I	TTAA	4 cut(s)	1116, 1199, 1239, 1264
Tru9I	TTAA	4 cut(s)	1116, 1199, 1239, 1264
TscAI	CASTG	2 cut(s)	129, 870
TseFI	GTSAC	1 cut(s)	636
TseI	GCWGC	2 cut(s)	448, 971
Tsp45I	GTSAC	1 cut(s)	636
TspDTI	ATGAA	3 cut(s)	648, 743, 920
TspGWI	ACGGA	2 cut(s)	737, 1000
TspRI	CASTG	2 cut(s)	129, 870
Van91I	CCANNNNNTGG	2 cut(s)	931, 1193
VpaK11BI	GGWCC	3 cut(s)	162, 820, 872
XapI	RAATTY	1 cut(s)	296
XceI	RCATGY	1 cut(s)	969
XmiI	GTMKAC	2 cut(s)	183, 746
XmnI	GAANNNNTTC	1 cut(s)	54
XspI	CTAG	3 cut(s)	95, 848, 858
Zsp2I	ATGCAT	1 cut(s)	110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.