No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G46430 AT5G59613 AT5G59613 |
| fragaria_vesca | FvH4_3g35530 |
| malus_domestica | MD01G1124900.v1.1 MD03G1096900.v1.1 MD11G1143400.v1.1 |
| prunus_persica | Prupe.2G232300_v2.0.a1 Prupe.6G081200_v2.0.a1 |
| pyrus_communis | pycom01g15120 |
| rosa_chinensis | RchiOBHm_Chr1g0340881 RchiOBHm_Chr1g0360701 RchiOBHm_Chr1g0367621 RchiOBHm_Chr2g0162431 RchiOBHm_Chr3g0463581 RchiOBHm_Chr5g0063751 RchiOBHm_Chr6g0265721 RchiOBHm_Chr7g0198591 RchiOBHm_Chr7g0223231 |
| rosa_laevigata | RLG00000035665 |
| rosa_multiflora | Rmu_sc0005638.1_g000001 Rmu_ssc0000309.1_g000040 |
| rosa_roxburghii | Rroxscaffold_1G00017110 Rroxscaffold_4G00320260 |
| rosa_rugosa | Rorug01G0461200 Rorug05G0359100 |
| rosa_samantha | Rh3AG123100 |
| rosa_wichuraiana | Rw2G027430 Rw4G009610 Rw5G037380 Rw5G039260 Rw6G010810 Rw6G019310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 8 |
| AcoI | YGGCCR | 2 cut(s) | 20, 56 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 121 |
| AgsI | TTSAA | 1 cut(s) | 34 |
| AjnI | CCWGG | 1 cut(s) | 63 |
| AluBI | AGCT | 1 cut(s) | 143 |
| AluI | AGCT | 1 cut(s) | 143 |
| AlwI | GGATC | 1 cut(s) | 8 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 54 |
| AoxI | GGCC | 3 cut(s) | 20, 56, 112 |
| AsuHPI | GGTGA | 2 cut(s) | 73, 88 |
| BbsI | GAAGAC | 1 cut(s) | 132 |
| BccI | CCATC | 1 cut(s) | 86 |
| BceAI | ACGGC | 1 cut(s) | 43 |
| BciT130I | CCWGG | 1 cut(s) | 65 |
| Bme1390I | CCNGG | 1 cut(s) | 65 |
| BmiI | GGNNCC | 1 cut(s) | 88 |
| BmrFI | CCNGG | 1 cut(s) | 65 |
| BpiI | GAAGAC | 1 cut(s) | 132 |
| BsaJI | CCNNGG | 1 cut(s) | 17 |
| BsaWI | WCCGGW | 1 cut(s) | 83 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 121 |
| Bse1I | ACTGG | 1 cut(s) | 59 |
| BseBI | CCWGG | 1 cut(s) | 65 |
| BseDI | CCNNGG | 1 cut(s) | 17 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 121 |
| BseMII | CTCAG | 2 cut(s) | 111, 153 |
| BseNI | ACTGG | 1 cut(s) | 59 |
| BshFI | GGCC | 3 cut(s) | 22, 58, 114 |
| BsiSI | CCGG | 1 cut(s) | 84 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 121 |
| BsnI | GGCC | 3 cut(s) | 22, 58, 114 |
| Bsp143I | GATC | 1 cut(s) | 13 |
| Bsp19I | CCATGG | 1 cut(s) | 17 |
| BspANI | GGCC | 3 cut(s) | 22, 58, 114 |
| BspCNI | CTCAG | 2 cut(s) | 112, 152 |
| BspLI | GGNNCC | 1 cut(s) | 88 |
| BspPI | GGATC | 1 cut(s) | 8 |
| BsrI | ACTGG | 1 cut(s) | 59 |
| BssECI | CCNNGG | 1 cut(s) | 17 |
| BssMI | GATC | 1 cut(s) | 13 |
| BssT1I | CCWWGG | 1 cut(s) | 17 |
| Bst2UI | CCWGG | 1 cut(s) | 65 |
| BstDEI | CTNAG | 3 cut(s) | 120, 132, 139 |
| BstDSI | CCRYGG | 1 cut(s) | 17 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 119 |
| BstKTI | GATC | 1 cut(s) | 16 |
| BstMBI | GATC | 1 cut(s) | 13 |
| BstNI | CCWGG | 1 cut(s) | 65 |
| BstSCI | CCNGG | 1 cut(s) | 63 |
| BstV2I | GAAGAC | 1 cut(s) | 132 |
| BsuRI | GGCC | 3 cut(s) | 22, 58, 114 |
| BtgI | CCRYGG | 1 cut(s) | 17 |
| BtsIMutI | CAGTG | 1 cut(s) | 117 |
| CaiI | CAGNNNCTG | 1 cut(s) | 54 |
| CseI | GACGC | 1 cut(s) | 137 |
| CviAII | CATG | 1 cut(s) | 18 |
| CviJI | RGCY | 4 cut(s) | 22, 58, 114, 143 |
| CviKI_1 | RGCY | 4 cut(s) | 22, 58, 114, 143 |
| DdeI | CTNAG | 3 cut(s) | 120, 132, 139 |
| DpnI | GATC | 1 cut(s) | 15 |
| DpnII | GATC | 1 cut(s) | 13 |
| EaeI | YGGCCR | 2 cut(s) | 20, 56 |
| Eco130I | CCWWGG | 1 cut(s) | 17 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 119 |
| EcoRII | CCWGG | 1 cut(s) | 63 |
| EcoT14I | CCWWGG | 1 cut(s) | 17 |
| ErhI | CCWWGG | 1 cut(s) | 17 |
| FaeI | CATG | 1 cut(s) | 21 |
| FaiI | YATR | 1 cut(s) | 19 |
| FatI | CATG | 1 cut(s) | 17 |
| HaeIII | GGCC | 3 cut(s) | 22, 58, 114 |
| HapII | CCGG | 1 cut(s) | 84 |
| HgaI | GACGC | 1 cut(s) | 137 |
| Hin1II | CATG | 1 cut(s) | 21 |
| HpaII | CCGG | 1 cut(s) | 84 |
| HphI | GGTGA | 2 cut(s) | 73, 88 |
| Hpy188I | TCNGA | 1 cut(s) | 153 |
| HpyF3I | CTNAG | 3 cut(s) | 120, 132, 139 |
| Hsp92II | CATG | 1 cut(s) | 21 |
| Kzo9I | GATC | 1 cut(s) | 13 |
| LpnPI | CCDG | 5 cut(s) | 34, 40, 50, 77, 97 |
| MalI | GATC | 1 cut(s) | 15 |
| MboI | GATC | 1 cut(s) | 13 |
| MboII | GAAGA | 2 cut(s) | 22, 137 |
| MnlI | CCTC | 5 cut(s) | 101, 115, 125, 147, 156 |
| MspI | CCGG | 1 cut(s) | 84 |
| MspR9I | CCNGG | 1 cut(s) | 65 |
| MvaI | CCWGG | 1 cut(s) | 65 |
| NcoI | CCATGG | 1 cut(s) | 17 |
| NdeII | GATC | 1 cut(s) | 13 |
| NlaIII | CATG | 1 cut(s) | 21 |
| NlaIV | GGNNCC | 1 cut(s) | 88 |
| Psp6I | CCWGG | 1 cut(s) | 63 |
| PspGI | CCWGG | 1 cut(s) | 63 |
| PspN4I | GGNNCC | 1 cut(s) | 88 |
| PstNI | CAGNNNCTG | 1 cut(s) | 54 |
| Sau3AI | GATC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 1 cut(s) | 65 |
| SetI | ASST | 2 cut(s) | 145, 167 |
| StyD4I | CCNGG | 1 cut(s) | 63 |
| StyI | CCWWGG | 1 cut(s) | 17 |
| TaqI | TCGA | 1 cut(s) | 12 |
| TscAI | CASTG | 1 cut(s) | 124 |
| TspRI | CASTG | 1 cut(s) | 124 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 119 |