Rw6G019310

No description available

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
38519079 .. 38519345
267 bp
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UTR
Exon/CDS
Intron
Rw6G019310.1

Sequence Viewer

Length: 153 bp
ATGAGAAAGTTCAATGCTTGGCTCGTGTTCTTCAAGCGCGAGTGGAATCGGAACTGGCATTTCCTCATCGGCTTCGCCATCACCGGGATTCTCATCACCAAGTTCTCTCTCTGTCTCACTGGCTTGCCTTTTGTGCAGAGGTACAAGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

50

Amino Acids

6.14

Weight (kDa)

11.1

Isoelectric Point (pI)

25.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 39
AfaI GTAC 1 cut(s) 143
AfiI CCNNNNNNNGG 1 cut(s) 84
AgsI TTSAA 2 cut(s) 13, 34
Alw26I GTCTC 1 cut(s) 119
AspLEI GCGC 1 cut(s) 39
AsuC2I CCSGG 1 cut(s) 85
AsuHPI GGTGA 2 cut(s) 73, 88
BauI CACGAG 1 cut(s) 23
BccI CCATC 1 cut(s) 86
BcnI CCSGG 1 cut(s) 85
BcoDI GTCTC 1 cut(s) 119
Bme1390I CCNGG 1 cut(s) 85
BmrFI CCNGG 1 cut(s) 85
BpuMI CCSGG 1 cut(s) 85
BsaBI GATNNNNATC 1 cut(s) 92
Bsc4I CCNNNNNNNGG 1 cut(s) 84
Bse1I ACTGG 2 cut(s) 59, 124
Bse8I GATNNNNATC 1 cut(s) 92
BseJI GATNNNNATC 1 cut(s) 92
BseLI CCNNNNNNNGG 1 cut(s) 84
BseNI ACTGG 2 cut(s) 59, 124
Bsh1236I CGCG 1 cut(s) 39
BsiSI CCGG 1 cut(s) 84
BslI CCNNNNNNNGG 1 cut(s) 84
BsmAI GTCTC 1 cut(s) 119
BspFNI CGCG 1 cut(s) 39
BsrI ACTGG 2 cut(s) 59, 124
BssSI CACGAG 1 cut(s) 23
Bst2BI CACGAG 1 cut(s) 23
BstC8I GCNNGC 1 cut(s) 125
BstFNI CGCG 1 cut(s) 39
BstHHI GCGC 1 cut(s) 39
BstMAI GTCTC 1 cut(s) 119
BstMWI GCNNNNNNNGC 1 cut(s) 133
BstSCI CCNGG 1 cut(s) 83
BstUI CGCG 1 cut(s) 39
BtsIMutI CAGTG 1 cut(s) 117
Cac8I GCNNGC 1 cut(s) 125
CfoI GCGC 1 cut(s) 39
Csp6I GTAC 1 cut(s) 142
CviJI RGCY 3 cut(s) 22, 72, 123
CviKI_1 RGCY 3 cut(s) 22, 72, 123
CviQI GTAC 1 cut(s) 142
GlaI GCGC 1 cut(s) 38
HapII CCGG 1 cut(s) 84
HhaI GCGC 1 cut(s) 39
Hin6I GCGC 1 cut(s) 37
HinP1I GCGC 1 cut(s) 37
HinfI GANTC 2 cut(s) 46, 88
HpaII CCGG 1 cut(s) 84
HphI GGTGA 2 cut(s) 73, 88
Hpy188I TCNGA 1 cut(s) 51
HpyCH4V TGCA 1 cut(s) 136
HpyF10VI GCNNNNNNNGC 1 cut(s) 133
HspAI GCGC 1 cut(s) 37
LpnPI CCDG 3 cut(s) 40, 97, 105
MboII GAAGA 1 cut(s) 22
MnlI CCTC 2 cut(s) 74, 132
MspI CCGG 1 cut(s) 84
MspR9I CCNGG 1 cut(s) 85
MvnI CGCG 1 cut(s) 39
MwoI GCNNNNNNNGC 1 cut(s) 133
NciI CCSGG 1 cut(s) 85
PfeI GAWTC 2 cut(s) 46, 88
RsaI GTAC 1 cut(s) 143
RsaNI GTAC 1 cut(s) 142
ScrFI CCNGG 1 cut(s) 85
SetI ASST 1 cut(s) 143
StyD4I CCNGG 1 cut(s) 83
TfiI GAWTC 2 cut(s) 46, 88
TscAI CASTG 1 cut(s) 124
TspRI CASTG 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.