AT5G59613

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
24015394 .. 24016610
1217 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G59613.2

Sequence Viewer

Length: 168 bp
ATGAGGTTGTTCGATCCATGGCCAGTGTTCTTCAAGAGAGAATGGAAACGTTGTTGGCCGTTTCTCACCGGATTCGCCGTTACCGGCGTTCTCATCACCAAGCTCACCGCTGGACTCACTGAGGAAGACGCCAAGAACTCCAAGTTTGTCCAACAACACAGGCGGTAA

Protein Analysis

55

Amino Acids

6.58

Weight (kDa)

10.17

Isoelectric Point (pI)

48.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 108, 163
AclI AACGTT 1 cut(s) 49
AclWI GGATC 1 cut(s) 8
AcoI YGGCCR 2 cut(s) 20, 56
AcyI GRCGYC 1 cut(s) 129
AgsI TTSAA 1 cut(s) 34
AluBI AGCT 1 cut(s) 103
AluI AGCT 1 cut(s) 103
AlwI GGATC 1 cut(s) 8
AoxI GGCC 2 cut(s) 20, 56
AsuHPI GGTGA 3 cut(s) 58, 88, 97
BalI TGGCCA 1 cut(s) 22
BbsI GAAGAC 1 cut(s) 132
BceAI ACGGC 2 cut(s) 43, 62
BpiI GAAGAC 1 cut(s) 132
BsaHI GRCGYC 1 cut(s) 129
BsaJI CCNNGG 1 cut(s) 17
BsaWI WCCGGW 1 cut(s) 68
Bse118I RCCGGY 1 cut(s) 83
Bse1I ACTGG 1 cut(s) 23
BseDI CCNNGG 1 cut(s) 17
BseMII CTCAG 1 cut(s) 111
BseNI ACTGG 1 cut(s) 23
BshFI GGCC 2 cut(s) 22, 58
BsiSI CCGG 2 cut(s) 69, 84
BsnI GGCC 2 cut(s) 22, 58
Bsp143I GATC 1 cut(s) 13
Bsp19I CCATGG 1 cut(s) 17
BspACI CCGC 2 cut(s) 108, 163
BspANI GGCC 2 cut(s) 22, 58
BspCNI CTCAG 1 cut(s) 112
BspPI GGATC 1 cut(s) 8
BsrFI RCCGGY 1 cut(s) 83
BsrI ACTGG 1 cut(s) 23
BssAI RCCGGY 1 cut(s) 83
BssECI CCNNGG 1 cut(s) 17
BssMI GATC 1 cut(s) 13
BssNI GRCGYC 1 cut(s) 129
BssT1I CCWWGG 1 cut(s) 17
BstACI GRCGYC 1 cut(s) 129
BstDEI CTNAG 1 cut(s) 120
BstDSI CCRYGG 1 cut(s) 17
BstKTI GATC 1 cut(s) 16
BstMBI GATC 1 cut(s) 13
BstV2I GAAGAC 1 cut(s) 132
BsuRI GGCC 2 cut(s) 22, 58
BtgI CCRYGG 1 cut(s) 17
BtsIMutI CAGTG 2 cut(s) 30, 117
Cfr10I RCCGGY 1 cut(s) 83
CseI GACGC 1 cut(s) 137
CviAII CATG 1 cut(s) 18
CviJI RGCY 3 cut(s) 22, 58, 103
CviKI_1 RGCY 3 cut(s) 22, 58, 103
DdeI CTNAG 1 cut(s) 120
DpnI GATC 1 cut(s) 15
DpnII GATC 1 cut(s) 13
EaeI YGGCCR 2 cut(s) 20, 56
Eco130I CCWWGG 1 cut(s) 17
EcoT14I CCWWGG 1 cut(s) 17
ErhI CCWWGG 1 cut(s) 17
FaeI CATG 1 cut(s) 21
FaiI YATR 1 cut(s) 19
FatI CATG 1 cut(s) 17
HaeIII GGCC 2 cut(s) 22, 58
HapII CCGG 2 cut(s) 69, 84
HgaI GACGC 1 cut(s) 137
Hin1I GRCGYC 1 cut(s) 129
Hin1II CATG 1 cut(s) 21
HinfI GANTC 2 cut(s) 72, 114
HpaII CCGG 2 cut(s) 69, 84
HphI GGTGA 3 cut(s) 58, 88, 97
Hpy188III TCNNGA 1 cut(s) 34
HpyCH4IV ACGT 1 cut(s) 49
HpyF3I CTNAG 1 cut(s) 120
HpySE526I ACGT 1 cut(s) 49
Hsp92I GRCGYC 1 cut(s) 129
Hsp92II CATG 1 cut(s) 21
Kzo9I GATC 1 cut(s) 13
LpnPI CCDG 5 cut(s) 36, 82, 96, 97, 145
MaeII ACGT 1 cut(s) 49
MaeIII GTNAC 1 cut(s) 79
MalI GATC 1 cut(s) 15
MboI GATC 1 cut(s) 13
MboII GAAGA 2 cut(s) 22, 137
MlsI TGGCCA 1 cut(s) 22
MluNI TGGCCA 1 cut(s) 22
MlyI GAGTC 1 cut(s) 108
MnlI CCTC 1 cut(s) 115
Mox20I TGGCCA 1 cut(s) 22
MscI TGGCCA 1 cut(s) 22
Msp20I TGGCCA 1 cut(s) 22
MspA1I CMGCKG 1 cut(s) 110
MspI CCGG 2 cut(s) 69, 84
NcoI CCATGG 1 cut(s) 17
NdeII GATC 1 cut(s) 13
NlaIII CATG 1 cut(s) 21
PfeI GAWTC 1 cut(s) 72
PleI GAGTC 1 cut(s) 108
PpsI GAGTC 1 cut(s) 108
Psp1406I AACGTT 1 cut(s) 49
Sau3AI GATC 1 cut(s) 13
SchI GAGTC 1 cut(s) 108
SetI ASST 3 cut(s) 8, 52, 105
SgeI CNNG 9 cut(s) 30, 35, 46, 81, 96, 112, 123, 145, 154
SsiI CCGC 2 cut(s) 108, 163
StyI CCWWGG 1 cut(s) 17
TaiI ACGT 1 cut(s) 52
TaqI TCGA 1 cut(s) 12
TfiI GAWTC 1 cut(s) 72
TscAI CASTG 2 cut(s) 30, 124
TspRI CASTG 2 cut(s) 30, 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.