RchiOBHm_Chr6g0265721

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
21646760 .. 21646915
156 bp
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UTR
Exon/CDS
Intron
PRQ23828

Sequence Viewer

Length: 156 bp
ATGAGAAAGTTCAATTCTTGGCTTGTGTTCTTCAAGCGCGAGTGGAATTGGAATTGGCCTTTCCTCGTCGGCTTCGCTATCACCGGGATTCTCATCACCAAGTTCTCTCTCTGTCTCACTGGGTACTCCACTCCATTTCTCTTTCTCATTCTATGA

Protein Analysis

51

Amino Acids

6.16

Weight (kDa)

10.03

Isoelectric Point (pI)

22.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 39
AfaI GTAC 1 cut(s) 125
AgsI TTSAA 2 cut(s) 13, 34
Alw26I GTCTC 1 cut(s) 119
AoxI GGCC 1 cut(s) 56
AspLEI GCGC 1 cut(s) 39
AsuC2I CCSGG 1 cut(s) 85
AsuHPI GGTGA 2 cut(s) 73, 88
BcnI CCSGG 1 cut(s) 85
BcoDI GTCTC 1 cut(s) 119
Bme1390I CCNGG 1 cut(s) 85
BmrFI CCNGG 1 cut(s) 85
BmrI ACTGGG 1 cut(s) 129
BmuI ACTGGG 1 cut(s) 129
BpuMI CCSGG 1 cut(s) 85
BsaBI GATNNNNATC 1 cut(s) 92
Bse1I ACTGG 1 cut(s) 124
Bse8I GATNNNNATC 1 cut(s) 92
BseJI GATNNNNATC 1 cut(s) 92
BseNI ACTGG 1 cut(s) 124
Bsh1236I CGCG 1 cut(s) 39
BshFI GGCC 1 cut(s) 58
BsiSI CCGG 1 cut(s) 84
BsmAI GTCTC 1 cut(s) 119
BsnI GGCC 1 cut(s) 58
BspANI GGCC 1 cut(s) 58
BspFNI CGCG 1 cut(s) 39
BsrI ACTGG 1 cut(s) 124
BstFNI CGCG 1 cut(s) 39
BstHHI GCGC 1 cut(s) 39
BstMAI GTCTC 1 cut(s) 119
BstSCI CCNGG 1 cut(s) 83
BstUI CGCG 1 cut(s) 39
BsuRI GGCC 1 cut(s) 58
BtsIMutI CAGTG 1 cut(s) 117
CfoI GCGC 1 cut(s) 39
Csp6I GTAC 1 cut(s) 124
CviJI RGCY 3 cut(s) 22, 58, 72
CviKI_1 RGCY 3 cut(s) 22, 58, 72
CviQI GTAC 1 cut(s) 124
FaiI YATR 1 cut(s) 154
GlaI GCGC 1 cut(s) 38
HaeIII GGCC 1 cut(s) 58
HapII CCGG 1 cut(s) 84
HhaI GCGC 1 cut(s) 39
Hin6I GCGC 1 cut(s) 37
HinP1I GCGC 1 cut(s) 37
HinfI GANTC 1 cut(s) 88
HpaII CCGG 1 cut(s) 84
HphI GGTGA 2 cut(s) 73, 88
Hpy99I CGWCG 1 cut(s) 71
HspAI GCGC 1 cut(s) 37
LpnPI CCDG 2 cut(s) 97, 105
MboII GAAGA 1 cut(s) 22
MluCI AATT 3 cut(s) 13, 46, 52
MnlI CCTC 1 cut(s) 74
MspI CCGG 1 cut(s) 84
MspR9I CCNGG 1 cut(s) 85
MvnI CGCG 1 cut(s) 39
NciI CCSGG 1 cut(s) 85
PfeI GAWTC 1 cut(s) 88
RsaI GTAC 1 cut(s) 125
RsaNI GTAC 1 cut(s) 124
ScrFI CCNGG 1 cut(s) 85
Sse9I AATT 3 cut(s) 13, 46, 52
StyD4I CCNGG 1 cut(s) 83
TasI AATT 3 cut(s) 13, 46, 52
TfiI GAWTC 1 cut(s) 88
TscAI CASTG 1 cut(s) 124
TspRI CASTG 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.