Polygalacturonase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23900 AT3G48950 |
| fragaria_vesca | FvH4_4g13870 |
| malus_domestica | MD01G1208400.v1.1 MD07G1279000.v1.1 |
| prunus_persica | Prupe.2G300900_v2.0.a1 Prupe.2G301000_v2.0.a1 Prupe.3G147400_v2.0.a1 Prupe.3G193700_v2.0.a1 |
| pyrus_communis | pycom01g21900 pycom07g25380 |
| rosa_chinensis | RchiOBHm_Chr1g0378321 RchiOBHm_Chr1g0378361 RchiOBHm_Chr4g0414931 RchiOBHm_Chr4g0414961 |
| rosa_laevigata | RLG00000008108 RLG00000008109 RLG00000026441 RLG00000026442 |
| rosa_multiflora | Rmu_sc0001017.1_g000009 Rmu_sc0004043.1_g000006 |
| rosa_roxburghii | Rroxscaffold_4G00280510 Rroxscaffold_4G00280520 Rroxscaffold_5G00358720 |
| rosa_rugosa | Rorug01G0408300 Rorug04G0131000 |
| rosa_samantha | Rh1AG429700 Rh1BG387400 Rh1CG400800 Rh1DG418400 Rh4AG189700 Rh4BG188300 Rh4BG188500 Rh4CG201700 Rh4DG188500 Rh4DG189100 |
| rosa_wichuraiana | Rw1G037600 Rw4G016180 Rw4G016220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 17 |
| AccII | CGCG | 1 cut(s) | 1128 |
| AccIII | TCCGGA | 2 cut(s) | 755, 896 |
| AciI | CCGC | 8 cut(s) | 155, 234, 783, 951, 971, 1126, 1139, 1229 |
| AclI | AACGTT | 1 cut(s) | 14 |
| AclWI | GGATC | 4 cut(s) | 829, 1022, 1082, 1178 |
| AcoI | YGGCCR | 1 cut(s) | 356 |
| AcsI | RAATTY | 4 cut(s) | 79, 101, 512, 806 |
| AfaI | GTAC | 5 cut(s) | 252, 383, 439, 548, 1261 |
| AfeI | AGCGCT | 1 cut(s) | 111 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 17, 52, 82, 264, 383, 411, 1079, 1193 |
| AgsI | TTSAA | 7 cut(s) | 62, 101, 421, 517, 532, 581, 1393 |
| AhlI | ACTAGT | 1 cut(s) | 25 |
| AjiI | CACGTC | 2 cut(s) | 454, 980 |
| AluBI | AGCT | 4 cut(s) | 211, 239, 1223, 1328 |
| AluI | AGCT | 4 cut(s) | 211, 239, 1223, 1328 |
| Alw21I | GWGCWC | 1 cut(s) | 241 |
| Alw26I | GTCTC | 5 cut(s) | 390, 431, 753, 757, 1169 |
| AlwI | GGATC | 4 cut(s) | 829, 1022, 1082, 1178 |
| Aor13HI | TCCGGA | 2 cut(s) | 755, 896 |
| Aor51HI | AGCGCT | 1 cut(s) | 111 |
| AoxI | GGCC | 1 cut(s) | 356 |
| ApeKI | GCWGC | 1 cut(s) | 823 |
| ApoI | RAATTY | 4 cut(s) | 79, 101, 512, 806 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1067, 1099, 1207, 1239 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 172, 527 |
| AspLEI | GCGC | 2 cut(s) | 112, 986 |
| AspS9I | GGNCC | 1 cut(s) | 790 |
| AsuC2I | CCSGG | 3 cut(s) | 67, 258, 412 |
| AsuHPI | GGTGA | 3 cut(s) | 65, 97, 655 |
| AvaII | GGWCC | 1 cut(s) | 790 |
| AxyI | CCTNAGG | 1 cut(s) | 880 |
| BalI | TGGCCA | 1 cut(s) | 358 |
| BanII | GRGCYC | 1 cut(s) | 241 |
| BbsI | GAAGAC | 2 cut(s) | 744, 1031 |
| Bbv12I | GWGCWC | 1 cut(s) | 241 |
| BbvI | GCAGC | 1 cut(s) | 835 |
| BccI | CCATC | 5 cut(s) | 158, 224, 335, 385, 962 |
| BceAI | ACGGC | 4 cut(s) | 595, 758, 857, 1152 |
| BcnI | CCSGG | 3 cut(s) | 67, 258, 412 |
| BcoDI | GTCTC | 5 cut(s) | 390, 431, 753, 757, 1169 |
| BcuI | ACTAGT | 1 cut(s) | 25 |
| BfaI | CTAG | 2 cut(s) | 26, 1008 |
| BfmI | CTRYAG | 1 cut(s) | 1218 |
| BfoI | RGCGCY | 2 cut(s) | 113, 987 |
| BglII | AGATCT | 1 cut(s) | 558 |
| BisI | GCNGC | 2 cut(s) | 824, 1230 |
| BlpI | GCTNAGC | 1 cut(s) | 212 |
| BlsI | GCNGC | 2 cut(s) | 825, 1231 |
| Bme1390I | CCNGG | 3 cut(s) | 67, 258, 412 |
| Bme18I | GGWCC | 1 cut(s) | 790 |
| BmgBI | CACGTC | 2 cut(s) | 454, 980 |
| BmgT120I | GGNCC | 1 cut(s) | 790 |
| BmiI | GGNNCC | 3 cut(s) | 403, 409, 791 |
| BmrFI | CCNGG | 3 cut(s) | 67, 258, 412 |
| BmsI | GCATC | 3 cut(s) | 344, 777, 861 |
| BpiI | GAAGAC | 2 cut(s) | 744, 1031 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 228, 260 |
| BpmI | CTGGAG | 1 cut(s) | 1293 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1233, 1329 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 212 |
| BpuMI | CCSGG | 3 cut(s) | 67, 258, 412 |
| Bsa29I | ATCGAT | 1 cut(s) | 603 |
| BsaBI | GATNNNNATC | 2 cut(s) | 557, 1182 |
| BsaJI | CCNNGG | 1 cut(s) | 1092 |
| BsaWI | WCCGGW | 5 cut(s) | 272, 404, 434, 755, 896 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 737, 767 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 17, 52, 82, 264, 383, 411, 1079, 1193 |
| Bse1I | ACTGG | 2 cut(s) | 359, 469 |
| Bse21I | CCTNAGG | 1 cut(s) | 880 |
| Bse3DI | GCAATG | 1 cut(s) | 371 |
| Bse8I | GATNNNNATC | 2 cut(s) | 557, 1182 |
| BseAI | TCCGGA | 2 cut(s) | 755, 896 |
| BseCI | ATCGAT | 1 cut(s) | 603 |
| BseDI | CCNNGG | 1 cut(s) | 1092 |
| BseGI | GGATG | 7 cut(s) | 309, 327, 349, 625, 954, 1053, 1069 |
| BseJI | GATNNNNATC | 2 cut(s) | 557, 1182 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 17, 52, 82, 264, 383, 411, 1079, 1193 |
| BseMI | GCAATG | 1 cut(s) | 371 |
| BseMII | CTCAG | 4 cut(s) | 226, 353, 1308, 1343 |
| BseNI | ACTGG | 2 cut(s) | 359, 469 |
| BseXI | GCAGC | 1 cut(s) | 835 |
| BsgI | GTGCAG | 1 cut(s) | 888 |
| Bsh1236I | CGCG | 1 cut(s) | 1128 |
| BshFI | GGCC | 1 cut(s) | 358 |
| BshVI | ATCGAT | 1 cut(s) | 603 |
| BsiHKAI | GWGCWC | 1 cut(s) | 241 |
| BsiWI | CGTACG | 1 cut(s) | 381 |
| BslFI | GGGAC | 4 cut(s) | 507, 521, 803, 990 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 17, 52, 82, 264, 383, 411, 1079, 1193 |
| BsmAI | GTCTC | 5 cut(s) | 390, 431, 753, 757, 1169 |
| BsmBI | CGTCTC | 2 cut(s) | 390, 753 |
| BsmFI | GGGAC | 4 cut(s) | 507, 521, 803, 990 |
| BsmI | GAATGC | 1 cut(s) | 819 |
| BsnI | GGCC | 1 cut(s) | 358 |
| Bsp1286I | GDGCHC | 1 cut(s) | 241 |
| Bsp13I | TCCGGA | 2 cut(s) | 755, 896 |
| Bsp1407I | TGTACA | 1 cut(s) | 1259 |
| Bsp143I | GATC | 9 cut(s) | 480, 552, 558, 600, 732, 834, 1014, 1087, 1183 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 212 |
| BspACI | CCGC | 8 cut(s) | 155, 234, 783, 951, 971, 1126, 1139, 1229 |
| BspANI | GGCC | 1 cut(s) | 358 |
| BspCNI | CTCAG | 4 cut(s) | 225, 352, 1309, 1342 |
| BspDI | ATCGAT | 1 cut(s) | 603 |
| BspEI | TCCGGA | 2 cut(s) | 755, 896 |
| BspFNI | CGCG | 1 cut(s) | 1128 |
| BspLI | GGNNCC | 3 cut(s) | 403, 409, 791 |
| BspPI | GGATC | 4 cut(s) | 829, 1022, 1082, 1178 |
| BsrDI | GCAATG | 1 cut(s) | 371 |
| BsrGI | TGTACA | 1 cut(s) | 1259 |
| BsrI | ACTGG | 2 cut(s) | 359, 469 |
| BssECI | CCNNGG | 1 cut(s) | 1092 |
| BssMI | GATC | 9 cut(s) | 480, 552, 558, 600, 732, 834, 1014, 1087, 1183 |
| BssT1I | CCWWGG | 1 cut(s) | 1092 |
| Bst4CI | ACNGT | 9 cut(s) | 425, 498, 546, 667, 685, 701, 743, 1064, 1349 |
| Bst6I | CTCTTC | 1 cut(s) | 388 |
| BstAUI | TGTACA | 1 cut(s) | 1259 |
| BstC8I | GCNNGC | 1 cut(s) | 209 |
| BstDEI | CTNAG | 7 cut(s) | 212, 339, 880, 1233, 1239, 1317, 1329 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1077 |
| BstF5I | GGATG | 7 cut(s) | 309, 327, 349, 625, 954, 1053, 1069 |
| BstFNI | CGCG | 1 cut(s) | 1128 |
| BstH2I | RGCGCY | 2 cut(s) | 113, 987 |
| BstHHI | GCGC | 2 cut(s) | 112, 986 |
| BstKTI | GATC | 9 cut(s) | 483, 555, 561, 603, 735, 837, 1017, 1090, 1186 |
| BstMAI | GTCTC | 5 cut(s) | 390, 431, 753, 757, 1169 |
| BstMBI | GATC | 9 cut(s) | 480, 552, 558, 600, 732, 834, 1014, 1087, 1183 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 213, 823, 875, 1229, 1235 |
| BstNSI | RCATGY | 1 cut(s) | 852 |
| BstSCI | CCNGG | 3 cut(s) | 65, 256, 410 |
| BstSFI | CTRYAG | 1 cut(s) | 1218 |
| BstUI | CGCG | 1 cut(s) | 1128 |
| BstV1I | GCAGC | 1 cut(s) | 835 |
| BstV2I | GAAGAC | 2 cut(s) | 744, 1031 |
| BstX2I | RGATCY | 2 cut(s) | 558, 1183 |
| BstYI | RGATCY | 2 cut(s) | 558, 1183 |
| Bsu15I | ATCGAT | 1 cut(s) | 603 |
| Bsu36I | CCTNAGG | 1 cut(s) | 880 |
| BsuRI | GGCC | 1 cut(s) | 358 |
| BsuTUI | ATCGAT | 1 cut(s) | 603 |
| BtgZI | GCGATG | 1 cut(s) | 754 |
| BtrI | CACGTC | 2 cut(s) | 454, 980 |
| BtsCI | GGATG | 7 cut(s) | 309, 327, 349, 625, 954, 1053, 1069 |
| BtsI | GCAGTG | 1 cut(s) | 1256 |
| BtsIMutI | CAGTG | 3 cut(s) | 462, 681, 1256 |
| Cac8I | GCNNGC | 1 cut(s) | 209 |
| CfoI | GCGC | 2 cut(s) | 112, 986 |
| Cfr13I | GGNCC | 1 cut(s) | 790 |
| ClaI | ATCGAT | 1 cut(s) | 603 |
| CseI | GACGC | 2 cut(s) | 634, 829 |
| Csp6I | GTAC | 5 cut(s) | 251, 382, 438, 547, 1260 |
| CviAII | CATG | 2 cut(s) | 849, 1302 |
| CviQI | GTAC | 5 cut(s) | 251, 382, 438, 547, 1260 |
| DdeI | CTNAG | 7 cut(s) | 212, 339, 880, 1233, 1239, 1317, 1329 |
| DpnI | GATC | 9 cut(s) | 482, 554, 560, 602, 734, 836, 1016, 1089, 1185 |
| DpnII | GATC | 9 cut(s) | 480, 552, 558, 600, 732, 834, 1014, 1087, 1183 |
| EaeI | YGGCCR | 1 cut(s) | 356 |
| Eam1104I | CTCTTC | 1 cut(s) | 388 |
| EarI | CTCTTC | 1 cut(s) | 388 |
| EciI | GGCGGA | 3 cut(s) | 249, 940, 1154 |
| Ecl136II | GAGCTC | 1 cut(s) | 239 |
| Eco130I | CCWWGG | 1 cut(s) | 1092 |
| Eco24I | GRGCYC | 1 cut(s) | 241 |
| Eco47I | GGWCC | 1 cut(s) | 790 |
| Eco47III | AGCGCT | 1 cut(s) | 111 |
| Eco53kI | GAGCTC | 1 cut(s) | 239 |
| Eco81I | CCTNAGG | 1 cut(s) | 880 |
| EcoICRI | GAGCTC | 1 cut(s) | 239 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1077 |
| EcoT14I | CCWWGG | 1 cut(s) | 1092 |
| EcoT22I | ATGCAT | 1 cut(s) | 854 |
| EcoT38I | GRGCYC | 1 cut(s) | 241 |
| ErhI | CCWWGG | 1 cut(s) | 1092 |
| Esp3I | CGTCTC | 2 cut(s) | 390, 753 |
| FaeI | CATG | 2 cut(s) | 852, 1305 |
| FaiI | YATR | 9 cut(s) | 41, 129, 203, 749, 850, 1038, 1133, 1220, 1303 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1385 |
| FaqI | GGGAC | 4 cut(s) | 507, 521, 803, 990 |
| FatI | CATG | 2 cut(s) | 848, 1301 |
| Fnu4HI | GCNGC | 2 cut(s) | 824, 1230 |
| FokI | GGATG | 7 cut(s) | 296, 314, 356, 612, 941, 1056, 1060 |
| FriOI | GRGCYC | 1 cut(s) | 241 |
| Fsp4HI | GCNGC | 2 cut(s) | 824, 1230 |
| FspBI | CTAG | 2 cut(s) | 26, 1008 |
| GlaI | GCGC | 2 cut(s) | 111, 985 |
| GluI | GCNGC | 2 cut(s) | 824, 1230 |
| GsuI | CTGGAG | 1 cut(s) | 1293 |
| HaeII | RGCGCY | 2 cut(s) | 113, 987 |
| HaeIII | GGCC | 1 cut(s) | 358 |
| HgaI | GACGC | 2 cut(s) | 634, 829 |
| HhaI | GCGC | 2 cut(s) | 112, 986 |
| Hin1II | CATG | 2 cut(s) | 852, 1305 |
| Hin6I | GCGC | 2 cut(s) | 110, 984 |
| HinP1I | GCGC | 2 cut(s) | 110, 984 |
| HincII | GTYRAC | 1 cut(s) | 1345 |
| HindII | GTYRAC | 1 cut(s) | 1345 |
| HphI | GGTGA | 3 cut(s) | 65, 97, 655 |
| Hpy166II | GTNNAC | 3 cut(s) | 23, 1191, 1345 |
| Hpy188I | TCNGA | 6 cut(s) | 352, 812, 839, 959, 1363, 1374 |
| Hpy8I | GTNNAC | 3 cut(s) | 23, 1191, 1345 |
| Hpy99I | CGWCG | 6 cut(s) | 455, 616, 701, 823, 843, 1172 |
| HpyAV | CCTTC | 1 cut(s) | 1073 |
| HpyCH4III | ACNGT | 9 cut(s) | 425, 498, 546, 667, 685, 701, 743, 1064, 1349 |
| HpyCH4IV | ACGT | 5 cut(s) | 14, 453, 912, 979, 990 |
| HpyCH4V | TGCA | 7 cut(s) | 134, 335, 720, 768, 852, 869, 1249 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 213, 823, 875, 1229, 1235 |
| HpyF3I | CTNAG | 7 cut(s) | 212, 339, 880, 1233, 1239, 1317, 1329 |
| HpySE526I | ACGT | 5 cut(s) | 14, 453, 912, 979, 990 |
| Hsp92II | CATG | 2 cut(s) | 852, 1305 |
| HspAI | GCGC | 2 cut(s) | 110, 984 |
| Kpn2I | TCCGGA | 2 cut(s) | 755, 896 |
| Kzo9I | GATC | 9 cut(s) | 480, 552, 558, 600, 732, 834, 1014, 1087, 1183 |
| LmnI | GCTCC | 3 cut(s) | 236, 373, 679 |
| Lsp1109I | GCAGC | 1 cut(s) | 835 |
| LweI | GCATC | 3 cut(s) | 344, 777, 861 |
| MaeI | CTAG | 2 cut(s) | 26, 1008 |
| MaeII | ACGT | 5 cut(s) | 14, 453, 912, 979, 990 |
| MalI | GATC | 9 cut(s) | 482, 554, 560, 602, 734, 836, 1016, 1089, 1185 |
| MboI | GATC | 9 cut(s) | 480, 552, 558, 600, 732, 834, 1014, 1087, 1183 |
| MboII | GAAGA | 8 cut(s) | 405, 532, 749, 935, 1036, 1333, 1348, 1405 |
| MflI | RGATCY | 2 cut(s) | 558, 1183 |
| MhlI | GDGCHC | 1 cut(s) | 241 |
| MlsI | TGGCCA | 1 cut(s) | 358 |
| MluCI | AATT | 8 cut(s) | 79, 101, 115, 512, 806, 1107, 1120, 1255 |
| MluNI | TGGCCA | 1 cut(s) | 358 |
| MlyI | GAGTC | 2 cut(s) | 79, 1171 |
| MmeI | TCCRAC | 2 cut(s) | 139, 862 |
| MnlI | CCTC | 4 cut(s) | 264, 311, 893, 1005 |
| Mox20I | TGGCCA | 1 cut(s) | 358 |
| Mph1103I | ATGCAT | 1 cut(s) | 854 |
| MroI | TCCGGA | 2 cut(s) | 755, 896 |
| MroXI | GAANNNNTTC | 2 cut(s) | 172, 527 |
| MscI | TGGCCA | 1 cut(s) | 358 |
| MseI | TTAA | 1 cut(s) | 282 |
| Msp20I | TGGCCA | 1 cut(s) | 358 |
| MspR9I | CCNGG | 3 cut(s) | 67, 258, 412 |
| Mva1269I | GAATGC | 1 cut(s) | 819 |
| MvnI | CGCG | 1 cut(s) | 1128 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 213, 823, 875, 1229, 1235 |
| NciI | CCSGG | 3 cut(s) | 67, 258, 412 |
| NdeII | GATC | 9 cut(s) | 480, 552, 558, 600, 732, 834, 1014, 1087, 1183 |
| NlaIII | CATG | 2 cut(s) | 852, 1305 |
| NlaIV | GGNNCC | 3 cut(s) | 403, 409, 791 |
| NmuCI | GTSAC | 5 cut(s) | 71, 85, 661, 679, 1213 |
| NsiI | ATGCAT | 1 cut(s) | 854 |
| NspI | RCATGY | 1 cut(s) | 852 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 918 |
| PctI | GAATGC | 1 cut(s) | 819 |
| PdmI | GAANNNNTTC | 2 cut(s) | 172, 527 |
| Pfl23II | CGTACG | 1 cut(s) | 381 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 17 |
| PfoI | TCCNGGA | 2 cut(s) | 65, 256 |
| PkrI | GCNGC | 2 cut(s) | 825, 1231 |
| PleI | GAGTC | 2 cut(s) | 78, 1170 |
| PpsI | GAGTC | 2 cut(s) | 78, 1170 |
| Psp124BI | GAGCTC | 1 cut(s) | 241 |
| Psp1406I | AACGTT | 1 cut(s) | 14 |
| PspLI | CGTACG | 1 cut(s) | 381 |
| PspN4I | GGNNCC | 3 cut(s) | 403, 409, 791 |
| PspPI | GGNCC | 1 cut(s) | 790 |
| PsuI | RGATCY | 2 cut(s) | 558, 1183 |
| RsaI | GTAC | 5 cut(s) | 252, 383, 439, 548, 1261 |
| RsaNI | GTAC | 5 cut(s) | 251, 382, 438, 547, 1260 |
| SacI | GAGCTC | 1 cut(s) | 241 |
| SaqAI | TTAA | 1 cut(s) | 282 |
| SatI | GCNGC | 2 cut(s) | 824, 1230 |
| Sau3AI | GATC | 9 cut(s) | 480, 552, 558, 600, 732, 834, 1014, 1087, 1183 |
| Sau96I | GGNCC | 1 cut(s) | 790 |
| SchI | GAGTC | 2 cut(s) | 79, 1171 |
| ScrFI | CCNGG | 3 cut(s) | 67, 258, 412 |
| SduI | GDGCHC | 1 cut(s) | 241 |
| SfaNI | GCATC | 3 cut(s) | 344, 777, 861 |
| SfcI | CTRYAG | 1 cut(s) | 1218 |
| SinI | GGWCC | 1 cut(s) | 790 |
| SpeI | ACTAGT | 1 cut(s) | 25 |
| Sse9I | AATT | 8 cut(s) | 79, 101, 115, 512, 806, 1107, 1120, 1255 |
| SsiI | CCGC | 8 cut(s) | 155, 234, 783, 951, 971, 1126, 1139, 1229 |
| SspI | AATATT | 1 cut(s) | 622 |
| SspMI | CTAG | 2 cut(s) | 26, 1008 |
| SstI | GAGCTC | 1 cut(s) | 241 |
| StyD4I | CCNGG | 3 cut(s) | 65, 256, 410 |
| StyI | CCWWGG | 1 cut(s) | 1092 |
| TaaI | ACNGT | 9 cut(s) | 425, 498, 546, 667, 685, 701, 743, 1064, 1349 |
| TaiI | ACGT | 5 cut(s) | 17, 456, 915, 982, 993 |
| TaqI | TCGA | 8 cut(s) | 555, 587, 603, 735, 833, 921, 1167, 1208 |
| TasI | AATT | 8 cut(s) | 79, 101, 115, 512, 806, 1107, 1120, 1255 |
| TatI | WGTACW | 1 cut(s) | 1259 |
| TauI | GCSGC | 1 cut(s) | 1232 |
| Tru1I | TTAA | 1 cut(s) | 282 |
| Tru9I | TTAA | 1 cut(s) | 282 |
| TscAI | CASTG | 3 cut(s) | 469, 688, 1256 |
| TseFI | GTSAC | 5 cut(s) | 71, 85, 661, 679, 1213 |
| TseI | GCWGC | 1 cut(s) | 823 |
| Tsp45I | GTSAC | 5 cut(s) | 71, 85, 661, 679, 1213 |
| TspDTI | ATGAA | 5 cut(s) | 298, 360, 614, 1037, 1046 |
| TspGWI | ACGGA | 7 cut(s) | 414, 489, 501, 649, 813, 1176, 1347 |
| TspRI | CASTG | 3 cut(s) | 469, 688, 1256 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 1 cut(s) | 790 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1077 |
| XapI | RAATTY | 4 cut(s) | 79, 101, 512, 806 |
| XceI | RCATGY | 1 cut(s) | 852 |
| XmnI | GAANNNNTTC | 2 cut(s) | 172, 527 |
| XspI | CTAG | 2 cut(s) | 26, 1008 |
| Zsp2I | ATGCAT | 1 cut(s) | 854 |