Prupe.2G301000_v2.0.a1

Belongs to the glycosyl hydrolase 28 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
28918402 .. 28921314
2913 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G301000.1

Sequence Viewer

Length: 1407 bp
ATGTCCAATCTTTCTGGAGCAATCTTTTTTATACTGGGATTGTTTTTCCTAAGAGCCGCAGAATGTAGAACACCAGCGAATTGGGGCACCGTCAAGTACTCTGCCCTTAGCTGTCGAAAGCACAGTGCTCTTTTAACTGATTTTGGAGCCGTTGGCGATGGCAAAACGTCCAACACAAAGGCCTTCAAGGCGGCCATTCATCATCTAAGCCAGAGTGCATCCGACGGCGGAGCACAGCTTATCGTGCCACCGGGGAAGTGGCTCACCGGGAGCTTCAACCTCACCAGCCATTTCACTCTTTTCCTCCACAAGGATGCTGTTATTCTTGCAACTCAGGATGAGTCAGAGTGGCCTCTTGTTTCAGTCCTGCCTTCATATGGGAGAGGCAGAGATGCCGCTGGTGGAAGGTTTAGCAGTCTCATTTTTGGAACAAACCTCACTGATGTCATAATTACCGGTAACAATGGAACCATCGATGGGCAAGGTGCTTCTTGGTGGAAAAAGTTCAAAGCAGGTCAATTGAATGAAACTCGACCCTACATGATTGAGATCATGTACTCTAATCAAATCCAAATATCAAATCTTACTTTGGTCAATTCTCCTTCTTGGTTTGTCCATCCCATATACAGCAGCAATATAACAATCCAAGGGCTCACTATCCTTGCACCAATTAACTCTCCTAACACAGATGGCATAGACCCAGATTCATGCTCACAAACTAGAATTGAAGACTGCTTCATAGTCTCTGGGGATGACTGCATTGCAGTAAAAAGTGGATGGGACCAATACGGGATCAAAGTTGGGATCCCAACAGAGCACCTTGTGATCAGAAGACTTACCTGCATTTCACCTGACAGTGCTACCATTGCTCTAGGCAGTGAGATGTCCGGTGGAATTCGCGATGTTCGAGCTGAGGACATCACAGCCCTTAGCACTCAATCCAGTGTGAGGATAAAAACTGCCCAAGGAAGAGGAGGTTATGTGAAAGACATATTTGTGAGAAGAATGACCCTCAAGACTATGAAGTATGTTTTCTGGATGACTGGCTCTTATGGGTCTCACCCGGACCCTGGCTTTGATCCTAAGGCATTGCCTTTGATCCAGAACATCAACTACAAACAAATTGAGGCTGAGAATGTTACTTACTCTGCAAGGCTGGAGGGAATTCCTAATGATCATTTCAAGGGAATTTGCATTTCTAATGTGACTATCACACTGACTGAGAAGCCCAAGAAATTACAATGGAACTGTACCGATATTGCGGGAGTTACAAGCAACGTGACTCCAAAGGCATGCGATTTGTTGCCGGAGAAGAAAGAAGTCATCGATTGTCCTTTCCCAGAAGATAGATTGGCGATTGAAGATGTTAAGTTGGTGACATGTTCTGCCAGTCTCCCTTTCTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

469

Amino Acids

51.12

Weight (kDa)

7.08

Isoelectric Point (pI)

37.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 503, 848
AccB1I GGYRCC 1 cut(s) 86
AccII CGCG 1 cut(s) 900
AciI CCGC 5 cut(s) 57, 191, 228, 396, 1262
AclWI GGATC 5 cut(s) 799, 800, 812, 1073, 1093
AcoI YGGCCR 1 cut(s) 192
AcsI RAATTY 3 cut(s) 894, 1164, 1188
AdeI CACNNNGTG 1 cut(s) 823
AfaI GTAC 3 cut(s) 98, 557, 1252
AfiI CCNNNNNNNGG 5 cut(s) 310, 377, 477, 948, 1070
AflIII ACRYGT 1 cut(s) 1379
AgeI ACCGGT 1 cut(s) 455
AgsI TTSAA 7 cut(s) 187, 277, 508, 523, 728, 1183, 1361
AjnI CCWGG 1 cut(s) 1069
AluBI AGCT 4 cut(s) 111, 238, 273, 911
AluI AGCT 4 cut(s) 111, 238, 273, 911
Alw21I GWGCWC 3 cut(s) 130, 235, 819
Alw26I GTCTC 4 cut(s) 422, 748, 1062, 1397
AlwI GGATC 5 cut(s) 799, 800, 812, 1073, 1093
AoxI GGCC 3 cut(s) 180, 192, 350
ApeKI GCWGC 1 cut(s) 630
ApoI RAATTY 3 cut(s) 894, 1164, 1188
ArsI GACNNNNNNTTYG 2 cut(s) 1058, 1090
AsiGI ACCGGT 1 cut(s) 455
Asp700I GAANNNNTTC 1 cut(s) 503
AspS9I GGNCC 2 cut(s) 781, 1066
AsuC2I CCSGG 3 cut(s) 252, 268, 1064
AsuHPI GGTGA 5 cut(s) 256, 274, 840, 1052, 1387
AvaII GGWCC 2 cut(s) 781, 1066
AxyI CCTNAGG 1 cut(s) 1083
BaeGI GKGCMC 1 cut(s) 89
BamHI GGATCC 1 cut(s) 804
BanI GGYRCC 1 cut(s) 86
BanII GRGCYC 1 cut(s) 654
BbsI GAAGAC 2 cut(s) 735, 838
Bbv12I GWGCWC 3 cut(s) 130, 235, 819
BbvCI CCTCAGC 1 cut(s) 912
BbvI GCAGC 1 cut(s) 642
BccI CCATC 6 cut(s) 152, 470, 479, 624, 683, 771
BceAI ACGGC 2 cut(s) 134, 241
BciT130I CCWGG 1 cut(s) 1071
BclI TGATCA 2 cut(s) 825, 1174
BcnI CCSGG 3 cut(s) 252, 268, 1064
BcoDI GTCTC 4 cut(s) 422, 748, 1062, 1397
BfaI CTAG 2 cut(s) 720, 872
BfuAI ACCTGC 2 cut(s) 503, 848
BglI GCCNNNNNGGC 1 cut(s) 188
BisI GCNGC 4 cut(s) 57, 192, 396, 631
BlsI GCNGC 4 cut(s) 58, 193, 397, 632
BmcAI AGTACT 1 cut(s) 98
Bme1390I CCNGG 4 cut(s) 252, 268, 1064, 1071
Bme18I GGWCC 2 cut(s) 781, 1066
BmgT120I GGNCC 2 cut(s) 781, 1066
BmiI GGNNCC 6 cut(s) 88, 148, 469, 782, 806, 1068
BmrFI CCNGG 4 cut(s) 252, 268, 1064, 1071
BmrI ACTGGG 1 cut(s) 44
BmsI GCATC 3 cut(s) 227, 304, 382
BmuI ACTGGG 1 cut(s) 44
BpiI GAAGAC 2 cut(s) 735, 838
BpmI CTGGAG 2 cut(s) 36, 1178
Bpu10I CCTNAGC 3 cut(s) 107, 912, 929
BpuEI CTTGAG 1 cut(s) 998
BpuMI CCSGG 3 cut(s) 252, 268, 1064
Bsa29I ATCGAT 2 cut(s) 474, 1326
BsaBI GATNNNNATC 1 cut(s) 548
BsaI GGTCTC 1 cut(s) 1062
BsaJI CCNNGG 4 cut(s) 251, 646, 964, 1069
BsaWI WCCGGW 2 cut(s) 455, 887
BsaXI ACNNNNNCTCC 2 cut(s) 966, 996
Bsc4I CCNNNNNNNGG 5 cut(s) 310, 377, 477, 948, 1070
Bse118I RCCGGY 1 cut(s) 455
Bse1I ACTGG 4 cut(s) 39, 942, 1048, 1389
Bse21I CCTNAGG 1 cut(s) 1083
Bse3DI GCAATG 3 cut(s) 759, 864, 1088
Bse8I GATNNNNATC 1 cut(s) 548
BseBI CCWGG 1 cut(s) 1071
BseCI ATCGAT 2 cut(s) 474, 1326
BseDI CCNNGG 4 cut(s) 251, 646, 964, 1069
BseGI GGATG 7 cut(s) 218, 319, 343, 616, 757, 782, 1044
BseJI GATNNNNATC 1 cut(s) 548
BseLI CCNNNNNNNGG 5 cut(s) 310, 377, 477, 948, 1070
BseMI GCAATG 3 cut(s) 759, 864, 1088
BseMII CTCAG 4 cut(s) 347, 903, 1122, 1212
BseNI ACTGG 4 cut(s) 39, 942, 1048, 1389
BseRI GAGGAG 1 cut(s) 987
BseSI GKGCMC 1 cut(s) 89
BseXI GCAGC 1 cut(s) 642
Bsh1236I CGCG 1 cut(s) 900
BshFI GGCC 3 cut(s) 182, 194, 352
BshNI GGYRCC 1 cut(s) 86
BshTI ACCGGT 1 cut(s) 455
BshVI ATCGAT 2 cut(s) 474, 1326
BsiHKAI GWGCWC 3 cut(s) 130, 235, 819
BsiSI CCGG 6 cut(s) 251, 267, 456, 888, 1064, 1307
BslFI GGGAC 1 cut(s) 794
BslI CCNNNNNNNGG 5 cut(s) 310, 377, 477, 948, 1070
BsmAI GTCTC 4 cut(s) 422, 748, 1062, 1397
BsmFI GGGAC 1 cut(s) 794
BsnI GGCC 3 cut(s) 182, 194, 352
Bso31I GGTCTC 1 cut(s) 1062
Bsp1286I GDGCHC 5 cut(s) 89, 130, 235, 654, 819
Bsp143I GATC 7 cut(s) 549, 792, 804, 825, 1078, 1098, 1174
Bsp68I TCGCGA 1 cut(s) 900
BspACI CCGC 5 cut(s) 57, 191, 228, 396, 1262
BspANI GGCC 3 cut(s) 182, 194, 352
BspCNI CTCAG 4 cut(s) 346, 904, 1123, 1213
BspDI ATCGAT 2 cut(s) 474, 1326
BspFNI CGCG 1 cut(s) 900
BspLI GGNNCC 6 cut(s) 88, 148, 469, 782, 806, 1068
BspMI ACCTGC 2 cut(s) 503, 848
BspPI GGATC 5 cut(s) 799, 800, 812, 1073, 1093
BspT107I GGYRCC 1 cut(s) 86
BspTNI GGTCTC 1 cut(s) 1062
BsrDI GCAATG 3 cut(s) 759, 864, 1088
BsrFI RCCGGY 1 cut(s) 455
BsrI ACTGG 4 cut(s) 39, 942, 1048, 1389
BssAI RCCGGY 1 cut(s) 455
BssECI CCNNGG 4 cut(s) 251, 646, 964, 1069
BssMI GATC 7 cut(s) 549, 792, 804, 825, 1078, 1098, 1174
BssT1I CCWWGG 2 cut(s) 646, 964
Bst2UI CCWGG 1 cut(s) 1071
Bst4CI ACNGT 4 cut(s) 91, 125, 857, 1250
Bst6I CTCTTC 1 cut(s) 964
BstC8I GCNNGC 1 cut(s) 1294
BstDEI CTNAG 9 cut(s) 50, 107, 206, 333, 912, 929, 1083, 1131, 1221
BstENI CCTNNNNNAGG 1 cut(s) 308
BstF5I GGATG 7 cut(s) 218, 319, 343, 616, 757, 782, 1044
BstFNI CGCG 1 cut(s) 900
BstKTI GATC 7 cut(s) 552, 795, 807, 828, 1081, 1101, 1177
BstMAI GTCTC 4 cut(s) 422, 748, 1062, 1397
BstMBI GATC 7 cut(s) 549, 792, 804, 825, 1078, 1098, 1174
BstMWI GCNNNNNNNGC 3 cut(s) 188, 244, 866
BstNI CCWGG 1 cut(s) 1071
BstNSI RCATGY 2 cut(s) 1296, 1383
BstSCI CCNGG 4 cut(s) 250, 266, 1062, 1069
BstSLI GKGCMC 1 cut(s) 89
BstUI CGCG 1 cut(s) 900
BstV1I GCAGC 1 cut(s) 642
BstV2I GAAGAC 2 cut(s) 735, 838
BstX2I RGATCY 1 cut(s) 804
BstXI CCANNNNNNTGG 1 cut(s) 81
BstYI RGATCY 1 cut(s) 804
Bsu15I ATCGAT 2 cut(s) 474, 1326
Bsu36I CCTNAGG 1 cut(s) 1083
BsuRI GGCC 3 cut(s) 182, 194, 352
BsuTUI ATCGAT 2 cut(s) 474, 1326
BtgZI GCGATG 2 cut(s) 171, 915
BtsCI GGATG 7 cut(s) 218, 319, 343, 616, 757, 782, 1044
BtsI GCAGTG 1 cut(s) 883
BtsIMutI CAGTG 6 cut(s) 130, 438, 862, 883, 949, 1214
BtuMI TCGCGA 1 cut(s) 900
BveI ACCTGC 2 cut(s) 503, 848
Cac8I GCNNGC 1 cut(s) 1294
Cfr10I RCCGGY 1 cut(s) 455
Cfr13I GGNCC 2 cut(s) 781, 1066
ClaI ATCGAT 2 cut(s) 474, 1326
Csp6I GTAC 3 cut(s) 97, 556, 1251
CspAI ACCGGT 1 cut(s) 455
CviAII CATG 5 cut(s) 541, 553, 708, 1293, 1380
CviQI GTAC 3 cut(s) 97, 556, 1251
DdeI CTNAG 9 cut(s) 50, 107, 206, 333, 912, 929, 1083, 1131, 1221
DpnI GATC 7 cut(s) 551, 794, 806, 827, 1080, 1100, 1176
DpnII GATC 7 cut(s) 549, 792, 804, 825, 1078, 1098, 1174
DraIII CACNNNGTG 1 cut(s) 823
EaeI YGGCCR 1 cut(s) 192
Eam1104I CTCTTC 1 cut(s) 964
EarI CTCTTC 1 cut(s) 964
EciI GGCGGA 1 cut(s) 243
Eco130I CCWWGG 2 cut(s) 646, 964
Eco147I AGGCCT 1 cut(s) 182
Eco24I GRGCYC 1 cut(s) 654
Eco31I GGTCTC 1 cut(s) 1062
Eco47I GGWCC 2 cut(s) 781, 1066
Eco81I CCTNAGG 1 cut(s) 1083
EcoNI CCTNNNNNAGG 1 cut(s) 308
EcoRI GAATTC 2 cut(s) 894, 1164
EcoRII CCWGG 1 cut(s) 1069
EcoT14I CCWWGG 2 cut(s) 646, 964
EcoT38I GRGCYC 1 cut(s) 654
ErhI CCWWGG 2 cut(s) 646, 964
FaeI CATG 5 cut(s) 544, 556, 711, 1296, 1383
FaqI GGGAC 1 cut(s) 794
FatI CATG 5 cut(s) 540, 552, 707, 1292, 1379
FauI CCCGC 1 cut(s) 1255
FauNDI CATATG 1 cut(s) 376
FbaI TGATCA 2 cut(s) 825, 1174
Fnu4HI GCNGC 4 cut(s) 57, 192, 396, 631
FokI GGATG 7 cut(s) 205, 326, 350, 603, 764, 789, 1051
FriOI GRGCYC 1 cut(s) 654
Fsp4HI GCNGC 4 cut(s) 57, 192, 396, 631
FspBI CTAG 2 cut(s) 720, 872
GluI GCNGC 4 cut(s) 57, 192, 396, 631
GsuI CTGGAG 2 cut(s) 36, 1178
HaeIII GGCC 3 cut(s) 182, 194, 352
HapII CCGG 6 cut(s) 251, 267, 456, 888, 1064, 1307
Hin1II CATG 5 cut(s) 544, 556, 711, 1296, 1383
HinfI GANTC 3 cut(s) 341, 704, 1282
HpaII CCGG 6 cut(s) 251, 267, 456, 888, 1064, 1307
HphI GGTGA 5 cut(s) 256, 274, 840, 1052, 1387
Hpy188I TCNGA 3 cut(s) 223, 346, 830
Hpy188III TCNNGA 6 cut(s) 15, 335, 899, 1015, 1036, 1102
Hpy99I CGWCG 1 cut(s) 227
HpyAV CCTTC 4 cut(s) 193, 381, 399, 612
HpyCH4III ACNGT 4 cut(s) 91, 125, 857, 1250
HpyCH4IV ACGT 2 cut(s) 167, 1278
HpyCH4V TGCA 8 cut(s) 218, 329, 665, 759, 764, 843, 1151, 1194
HpyF10VI GCNNNNNNNGC 3 cut(s) 188, 244, 866
HpyF3I CTNAG 9 cut(s) 50, 107, 206, 333, 912, 929, 1083, 1131, 1221
HpySE526I ACGT 2 cut(s) 167, 1278
Hsp92II CATG 5 cut(s) 544, 556, 711, 1296, 1383
Ksp22I TGATCA 2 cut(s) 825, 1174
Kzo9I GATC 7 cut(s) 549, 792, 804, 825, 1078, 1098, 1174
LmnI GCTCC 4 cut(s) 17, 146, 230, 270
Lsp1109I GCAGC 1 cut(s) 642
LweI GCATC 3 cut(s) 227, 304, 382
MaeI CTAG 2 cut(s) 720, 872
MaeII ACGT 2 cut(s) 167, 1278
MaeIII GTNAC 6 cut(s) 458, 1138, 1204, 1267, 1279, 1375
MalI GATC 7 cut(s) 551, 794, 806, 827, 1080, 1100, 1176
MboI GATC 7 cut(s) 549, 792, 804, 825, 1078, 1098, 1174
MboII GAAGA 8 cut(s) 740, 843, 981, 1014, 1324, 1355, 1373, 1393
MfeI CAATTG 1 cut(s) 518
MflI RGATCY 1 cut(s) 804
MhlI GDGCHC 5 cut(s) 89, 130, 235, 654, 819
MlyI GAGTC 2 cut(s) 350, 1276
MmeI TCCRAC 2 cut(s) 195, 246
MroXI GAANNNNTTC 1 cut(s) 503
MseI TTAA 3 cut(s) 134, 672, 1368
MslI CAYNNNNRTG 2 cut(s) 312, 995
MspA1I CMGCKG 1 cut(s) 398
MspI CCGG 6 cut(s) 251, 267, 456, 888, 1064, 1307
MspR9I CCNGG 4 cut(s) 252, 268, 1064, 1071
MunI CAATTG 1 cut(s) 518
MvaI CCWGG 1 cut(s) 1071
MvnI CGCG 1 cut(s) 900
MwoI GCNNNNNNNGC 3 cut(s) 188, 244, 866
NciI CCSGG 3 cut(s) 252, 268, 1064
NdeI CATATG 1 cut(s) 376
NdeII GATC 7 cut(s) 549, 792, 804, 825, 1078, 1098, 1174
NlaIII CATG 5 cut(s) 544, 556, 711, 1296, 1383
NlaIV GGNNCC 6 cut(s) 88, 148, 469, 782, 806, 1068
NmuCI GTSAC 3 cut(s) 1204, 1279, 1375
NruI TCGCGA 1 cut(s) 900
NspI RCATGY 2 cut(s) 1296, 1383
PaeI GCATGC 1 cut(s) 1296
PceI AGGCCT 1 cut(s) 182
PciI ACATGT 1 cut(s) 1379
PcsI WCGNNNNNNNCGW 1 cut(s) 904
PdmI GAANNNNTTC 1 cut(s) 503
PfeI GAWTC 1 cut(s) 704
PinAI ACCGGT 1 cut(s) 455
PkrI GCNGC 4 cut(s) 58, 193, 397, 632
PleI GAGTC 2 cut(s) 349, 1276
PpsI GAGTC 2 cut(s) 349, 1276
PscI ACATGT 1 cut(s) 1379
Psp6I CCWGG 1 cut(s) 1069
PspGI CCWGG 1 cut(s) 1069
PspN4I GGNNCC 6 cut(s) 88, 148, 469, 782, 806, 1068
PspPI GGNCC 2 cut(s) 781, 1066
PsrI GAACNNNNNNTAC 2 cut(s) 1097, 1129
PsuI RGATCY 1 cut(s) 804
RruI TCGCGA 1 cut(s) 900
RsaI GTAC 3 cut(s) 98, 557, 1252
RsaNI GTAC 3 cut(s) 97, 556, 1251
RseI CAYNNNNRTG 2 cut(s) 312, 995
SaqAI TTAA 3 cut(s) 134, 672, 1368
SatI GCNGC 4 cut(s) 57, 192, 396, 631
Sau3AI GATC 7 cut(s) 549, 792, 804, 825, 1078, 1098, 1174
Sau96I GGNCC 2 cut(s) 781, 1066
ScaI AGTACT 1 cut(s) 98
SchI GAGTC 2 cut(s) 350, 1276
ScrFI CCNGG 4 cut(s) 252, 268, 1064, 1071
SduI GDGCHC 5 cut(s) 89, 130, 235, 654, 819
SfaNI GCATC 3 cut(s) 227, 304, 382
SinI GGWCC 2 cut(s) 781, 1066
SmiMI CAYNNNNRTG 2 cut(s) 312, 995
SmlI CTYRAG 1 cut(s) 1013
SmoI CTYRAG 1 cut(s) 1013
SphI GCATGC 1 cut(s) 1296
SseBI AGGCCT 1 cut(s) 182
SsiI CCGC 5 cut(s) 57, 191, 228, 396, 1262
SspMI CTAG 2 cut(s) 720, 872
StuI AGGCCT 1 cut(s) 182
StyD4I CCNGG 4 cut(s) 250, 266, 1062, 1069
StyI CCWWGG 2 cut(s) 646, 964
TaaI ACNGT 4 cut(s) 91, 125, 857, 1250
TaiI ACGT 2 cut(s) 170, 1281
TaqI TCGA 5 cut(s) 115, 474, 532, 907, 1326
TatI WGTACW 2 cut(s) 96, 555
TauI GCSGC 3 cut(s) 59, 194, 398
TfiI GAWTC 1 cut(s) 704
Tru1I TTAA 3 cut(s) 134, 672, 1368
Tru9I TTAA 3 cut(s) 134, 672, 1368
TscAI CASTG 6 cut(s) 130, 445, 862, 883, 949, 1221
TseFI GTSAC 3 cut(s) 1204, 1279, 1375
TseI GCWGC 1 cut(s) 630
Tsp45I GTSAC 3 cut(s) 1204, 1279, 1375
TspDTI ATGAA 6 cut(s) 188, 363, 540, 696, 727, 1037
TspRI CASTG 6 cut(s) 130, 445, 862, 883, 949, 1221
VpaK11BI GGWCC 2 cut(s) 781, 1066
XagI CCTNNNNNAGG 1 cut(s) 308
XapI RAATTY 3 cut(s) 894, 1164, 1188
XceI RCATGY 2 cut(s) 1296, 1383
XcmI CCANNNNNNNNNTGG 1 cut(s) 255
XmnI GAANNNNTTC 1 cut(s) 503
XspI CTAG 2 cut(s) 720, 872
ZrmI AGTACT 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.