Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0002711

Physical Location & Seq

Genomic Coordinates Reverse (-)

3071030 .. 3077799

Gene Structure 6770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026442

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGCTTCAATTTCAGTAGCAGCATTGCTATCTTTAGTGACATTGCTACTTCTGGCGATTGAGTCTAATGCAGGCGGAATCGCGATTTACTGGGGCCAAAATGGAAATGAAGGCACATTAGCACAAACATGTACCTCAGGGAACTACAAGTTTGTAAACATAGCTTTCCTCTCATCATTTGGCAATGGCCGAACCCCTACCATAAACCTTGCGGGTCACTGTGACCCGTCCAGCAATGGATGCACCAAGTTCAGCTCGCAAATCAAGTCGTGCCAAGCCAGAGGCATCAAGGTCATACTCTCTATTGGGGGAGGCTGGGGAGGTACTGGAGGCTACTCTCTAGCATCATCTGAAGATGCCCGCCAAGTTGGTGCTTACTTGTGGAACAACTTCTTGGGAGGACACTCCTCTTCAAGGCCGTTGGGAGATGCTGTTTTGGATGGAGTTGACTTCGACATTGAAGGAGGGGATGACCAGTACTGGGATGACCTTGCTAGGTACCTTTCGGCGCATAGCAAGAAGGGTGGCAAGAAAGTTTACTTGACTGCTGCTCCACAGTGTCCCTTTCCTGATGCTTATGTTGGAAATGCACTTAAGACAGGCCTATTTGACTATGTTTGGGTTCAATTCTACAACAACCCTCCTTGTCAGTACACTTCTGGTGATGTCACCAATCTCAAAGACGCTTGGAACCAATGGACTTCAGCCATTCCTGCACAGAAGATCTTCTTAGGACTCCCTGCTGCACCTCAAGCTGCTGGGAGCGGATTTATTCCTGCTGCTGCTCTCACTTCACAAGTTCTTCCGGGTATAAAAAATTCAGCTAAATATGGTGGTGTCATGCTTTGGTCCAAGTATTATGATGATCTTGATGGATACAGCTCCTCCATCAAGAATCATGTCGCTACAATTATTGTTGCATTGGGATTGCTATTCTTACAAGCAGCAGAAGGTAGAAGAGAGAAGATTGAGGATGTGGTTACGTACTCCGCCATTAACTGCCGGAAGCACAGTGCTCTTTTGACTGATTTTGGAGCCGTTGGAGATGGGAAAACGCTGAACACAAAGGCCTTCAAAGATGCAGTTGATAAACTAAGCCAGTATGCATCGGATGGTGGAGCACAGCTAATTGTGCCTCCCGGAAAATGGCTTACCGGGAGCTTTAATCTCATTAGTCACTTTACCCTTTTCCTCCATAAGGATGCTGTTATTCTTGGGTCTCAGGATGAATCAGAATGGCCTCTTGTTCCAGTTCTGCCTTCATACGGGAGAGGCAGAGACGCCCCTGGTGGAAGGCGTAGCAGTCTCGTCTTTGGAAGCAACCTCACTGATGTCGTAATTACTGGTAACAATGGCACCATTGATGGACAAGGTGTTCCTTGGTGGGAAAAGTTCAAAAAGGGTCTTTTGAATGCCACCAGACCATACTTGATTGAGATTATGTTCTCTAATCAGATCCAAATCTCTAATCTCACTTTGACCAATTCTCCATCTTGGCATGTCCATCCCATTTACAGCAGCAACATAACAATCCAAAGCCTCACTATCCTTGCCCCAGTTAACGTTCCCAACACAGATGGGATTAACCCCGATTCATGTTCACAAACTCGTATTGAAGACTGTTACATAGTCTCGGGGGATGACTGCATTGCAGTGAAGAGTGGCTGGGATCAGTATGGAATCAAATTCGGCATGCCAACCGAGCATCTTGTTATCAGGAAGCTCACCTGCATTTCACCTAAAAGTGCTACCGTTGCTCTAGGCAGTGAAATGTCCGGTGGAATCAGAGATGTTAGAGTTGAGGATGTCACAGCCATTAACACTGAATCTGGTATTAGGATCAAAACAGCTGAAGGGAGAGGGGCTTTTGTCAAAGACATCTTTGTACGACGATTAACATTGAGCACTATGAAGTACGTTTTTTGGATATCAGGCGCATATGGTTCGCATCCAGACGAGGGATTTGATCCAAAGGCACTTCCTGTGATTCGAAACATCAACTACAGAGAGATTGTCGCTGAGAATGTTACCAGGCCAGCACAGTTGGATGGACTTGCTAACGACCCTTTCAATGGAATTTGCATTTCTGATGTGAGTATCTCATTGACTGCAAAGCCTAAGGAGCTGTTGTGGAATTGTACTGATGTTGAGGGCATTACAAGCAATGTGACTCCAAAGGCTTGCGATTTGTTGCCCGAGCAGCAAAACCCAGTAGATTGTGCTTTCCCTGAGGATAAGATAGCCATTGAGGATGTTAAGTTGACGAGTTGTTCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_28

Protein Analysis

760

Amino Acids

81.64

Weight (kDa)

5.75

Isoelectric Point (pI)

36.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_18	PF00704	27 - 249	2.6e-22	Glycosyl hydrolases family 18
Glyco_hydro_28	PF00295	436 - 717	1.1e-37	Glycosyl hydrolases family 28

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23900 AT3G48950
fragaria_vesca	FvH4_4g13870
malus_domestica	MD01G1208400.v1.1 MD07G1279000.v1.1
prunus_persica	Prupe.2G300900_v2.0.a1 Prupe.2G301000_v2.0.a1 Prupe.3G147400_v2.0.a1 Prupe.3G193700_v2.0.a1
pyrus_communis	pycom01g21900 pycom07g25380
rosa_chinensis	RchiOBHm_Chr1g0378321 RchiOBHm_Chr1g0378361 RchiOBHm_Chr4g0414931 RchiOBHm_Chr4g0414961
rosa_laevigata	RLG00000008108 RLG00000008109 RLG00000026441 RLG00000026442
rosa_multiflora	Rmu_sc0001017.1_g000009 Rmu_sc0004043.1_g000006
rosa_roxburghii	Rroxscaffold_4G00280510 Rroxscaffold_4G00280520 Rroxscaffold_5G00358720
rosa_rugosa	Rorug01G0408300 Rorug04G0131000
rosa_samantha	Rh1AG429700 Rh1BG387400 Rh1CG400800 Rh1DG418400 Rh4AG189700 Rh4BG188300 Rh4BG188500 Rh4CG201700 Rh4DG188500 Rh4DG189100
rosa_wichuraiana	Rw1G037600 Rw4G016180 Rw4G016220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1736
Acc36I	ACCTGC	1 cut(s)	1736
Acc65I	GGTACC	1 cut(s)	498
AccB1I	GGYRCC	2 cut(s)	498, 1355
AccBSI	CCGCTC	1 cut(s)	765
AccII	CGCG	1 cut(s)	83
AciI	CCGC	5 cut(s)	75, 212, 361, 765, 990
AclI	AACGTT	1 cut(s)	1563
AclWI	GGATC	4 cut(s)	1450, 1677, 1847, 1961
AcoI	YGGCCR	1 cut(s)	187
AcsI	RAATTY	3 cut(s)	817, 1685, 2076
AcuI	CTGAAG	3 cut(s)	372, 687, 1872
AcyI	GRCGYC	1 cut(s)	1281
AfaI	GTAC	9 cut(s)	133, 325, 479, 500, 653, 986, 1887, 1916, 2140
AfiI	CCNNNNNNNGG	7 cut(s)	414, 481, 1146, 1198, 1265, 1958, 2072
AflII	CTTAAG	1 cut(s)	593
AflIII	ACRYGT	1 cut(s)	128
AgsI	TTSAA	9 cut(s)	9, 414, 461, 626, 1075, 1396, 1411, 1616, 2071
AjnI	CCWGG	2 cut(s)	1285, 2030
AjuI	GAANNNNNNNTTGG	2 cut(s)	377, 409
AloI	GAACNNNNNNTCC	2 cut(s)	1359, 1391
Alw21I	GWGCWC	3 cut(s)	1018, 1123, 1907
Alw26I	GTCTC	4 cut(s)	1224, 1272, 1310, 1636
AlwI	GGATC	4 cut(s)	1450, 1677, 1847, 1961
Ama87I	CYCGRG	2 cut(s)	1633, 2195
AoxI	GGCC	7 cut(s)	94, 187, 416, 601, 1068, 1238, 2033
ApeKI	GCWGC	9 cut(s)	20, 548, 743, 755, 779, 782, 944, 1518, 2200
ApoI	RAATTY	3 cut(s)	817, 1685, 2076
ArsI	GACNNNNNNTTYG	2 cut(s)	1946, 1978
Asp700I	GAANNNNTTC	2 cut(s)	389, 725
Asp718I	GGTACC	1 cut(s)	498
AspLEI	GCGC	2 cut(s)	511, 1937
AspS9I	GGNCC	2 cut(s)	94, 849
AsuC2I	CCSGG	3 cut(s)	807, 1140, 1156
AsuHPI	GGTGA	4 cut(s)	661, 674, 1717, 1728
AsuII	TTCGAA	1 cut(s)	1990
AvaI	CYCGRG	2 cut(s)	1633, 2195
AvaII	GGWCC	1 cut(s)	849
AxyI	CCTNAGG	3 cut(s)	136, 2118, 2229
BanI	GGYRCC	2 cut(s)	498, 1355
BbsI	GAAGAC	1 cut(s)	1623
Bbv12I	GWGCWC	3 cut(s)	1018, 1123, 1907
BbvI	GCAGC	9 cut(s)	32, 535, 730, 742, 766, 769, 956, 1530, 2212
BceAI	ACGGC	2 cut(s)	403, 1022
BcgI	CGANNNNNNTGC	2 cut(s)	1926, 1960
BciT130I	CCWGG	2 cut(s)	1287, 2032
BciVI	GTATCC	1 cut(s)	869
BcnI	CCSGG	3 cut(s)	807, 1140, 1156
BcoDI	GTCTC	4 cut(s)	1224, 1272, 1310, 1636
BfaI	CTAG	3 cut(s)	341, 495, 1760
BfmI	CTRYAG	1 cut(s)	2002
BfrI	CTTAAG	1 cut(s)	593
BfuAI	ACCTGC	1 cut(s)	1736
BfuI	GTATCC	1 cut(s)	869
BglII	AGATCT	1 cut(s)	723
BisI	GCNGC	9 cut(s)	21, 549, 744, 756, 780, 783, 945, 1519, 2201
BlsI	GCNGC	9 cut(s)	22, 550, 745, 757, 781, 784, 946, 1520, 2202
BmcAI	AGTACT	1 cut(s)	479
Bme1390I	CCNGG	5 cut(s)	807, 1140, 1156, 1287, 2032
Bme18I	GGWCC	1 cut(s)	849
BmeT110I	CYCGRG	2 cut(s)	1633, 2195
BmgT120I	GGNCC	2 cut(s)	94, 849
BmiI	GGNNCC	5 cut(s)	95, 500, 692, 1036, 1357
BmrFI	CCNGG	5 cut(s)	807, 1140, 1156, 1287, 2032
BmrI	ACTGGG	4 cut(s)	100, 490, 1550, 2204
BmuI	ACTGGG	4 cut(s)	100, 490, 1550, 2204
BpiI	GAAGAC	1 cut(s)	1623
BpmI	CTGGAG	1 cut(s)	348
Bpu14I	TTCGAA	1 cut(s)	1990
BpuEI	CTTGAG	1 cut(s)	735
BpuMI	CCSGG	3 cut(s)	807, 1140, 1156
BsaAI	YACGTR	1 cut(s)	984
BsaBI	GATNNNNATC	1 cut(s)	1460
BsaHI	GRCGYC	1 cut(s)	1281
BsaI	GGTCTC	1 cut(s)	1224
BsaJI	CCNNGG	2 cut(s)	1285, 1379
BsaWI	WCCGGW	1 cut(s)	1775
Bsc4I	CCNNNNNNNGG	7 cut(s)	414, 481, 1146, 1198, 1265, 1958, 2072
Bse1I	ACTGG	9 cut(s)	95, 331, 475, 485, 1099, 1250, 1348, 1556, 2210
Bse21I	CCTNAGG	3 cut(s)	136, 2118, 2229
Bse3DI	GCAATG	6 cut(s)	23, 41, 190, 241, 1647, 2170
Bse8I	GATNNNNATC	1 cut(s)	1460
BseBI	CCWGG	2 cut(s)	1287, 2032
BseDI	CCNNGG	2 cut(s)	1285, 1379
BseJI	GATNNNNATC	1 cut(s)	1460
BseLI	CCNNNNNNNGG	7 cut(s)	414, 481, 1146, 1198, 1265, 1958, 2072
BseMI	GCAATG	6 cut(s)	23, 41, 190, 241, 1647, 2170
BseMII	CTCAG	4 cut(s)	150, 1235, 2010, 2220
BseNI	ACTGG	9 cut(s)	95, 331, 475, 485, 1099, 1250, 1348, 1556, 2210
BseRI	GAGGAG	2 cut(s)	397, 874
BseXI	GCAGC	9 cut(s)	32, 535, 730, 742, 766, 769, 956, 1530, 2212
BseYI	CCCAGC	3 cut(s)	315, 758, 1665
BsgI	GTGCAG	2 cut(s)	699, 729
Bsh1236I	CGCG	1 cut(s)	83
BshFI	GGCC	7 cut(s)	96, 189, 418, 603, 1070, 1240, 2035
BshNI	GGYRCC	2 cut(s)	498, 1355
BsiHKAI	GWGCWC	3 cut(s)	1018, 1123, 1907
BsiHKCI	CYCGRG	2 cut(s)	1633, 2195
BsiSI	CCGG	5 cut(s)	806, 1003, 1140, 1155, 1776
BslFI	GGGAC	1 cut(s)	546
BslI	CCNNNNNNNGG	7 cut(s)	414, 481, 1146, 1198, 1265, 1958, 2072
BsmAI	GTCTC	4 cut(s)	1224, 1272, 1310, 1636
BsmBI	CGTCTC	1 cut(s)	1272
BsmFI	GGGAC	1 cut(s)	546
BsmI	GAATGC	1 cut(s)	1417
BsnI	GGCC	7 cut(s)	96, 189, 418, 603, 1070, 1240, 2035
Bso31I	GGTCTC	1 cut(s)	1224
BsoBI	CYCGRG	2 cut(s)	1633, 2195
Bsp119I	TTCGAA	1 cut(s)	1990
Bsp1286I	GDGCHC	3 cut(s)	1018, 1123, 1907
Bsp143I	GATC	6 cut(s)	723, 865, 1455, 1669, 1839, 1966
Bsp68I	TCGCGA	1 cut(s)	83
BspACI	CCGC	5 cut(s)	75, 212, 361, 765, 990
BspANI	GGCC	7 cut(s)	96, 189, 418, 603, 1070, 1240, 2035
BspCNI	CTCAG	4 cut(s)	149, 1234, 2011, 2221
BspFNI	CGCG	1 cut(s)	83
BspLI	GGNNCC	5 cut(s)	95, 500, 692, 1036, 1357
BspMI	ACCTGC	1 cut(s)	1736
BspPI	GGATC	4 cut(s)	1450, 1677, 1847, 1961
BspT104I	TTCGAA	1 cut(s)	1990
BspT107I	GGYRCC	2 cut(s)	498, 1355
BspTI	CTTAAG	1 cut(s)	593
BspTNI	GGTCTC	1 cut(s)	1224
BsrBI	CCGCTC	1 cut(s)	765
BsrDI	GCAATG	6 cut(s)	23, 41, 190, 241, 1647, 2170
BsrI	ACTGG	9 cut(s)	95, 331, 475, 485, 1099, 1250, 1348, 1556, 2210
BssECI	CCNNGG	2 cut(s)	1285, 1379
BssMI	GATC	6 cut(s)	723, 865, 1455, 1669, 1839, 1966
BssNI	GRCGYC	1 cut(s)	1281
BssT1I	CCWWGG	1 cut(s)	1379
Bst2UI	CCWGG	2 cut(s)	1287, 2032
Bst4CI	ACNGT	6 cut(s)	221, 558, 1013, 1622, 1753, 2043
Bst6I	CTCTTC	3 cut(s)	415, 952, 1652
BstACI	GRCGYC	1 cut(s)	1281
BstAFI	CTTAAG	1 cut(s)	593
BstAPI	GCANNNNNTGC	1 cut(s)	240
BstBAI	YACGTR	1 cut(s)	984
BstBI	TTCGAA	1 cut(s)	1990
BstC8I	GCNNGC	6 cut(s)	73, 257, 361, 1694, 2037, 2182
BstDEI	CTNAG	7 cut(s)	136, 730, 1094, 1221, 2019, 2118, 2229
BstENI	CCTNNNNNAGG	2 cut(s)	412, 1196
BstFNI	CGCG	1 cut(s)	83
BstHHI	GCGC	2 cut(s)	511, 1937
BstKTI	GATC	6 cut(s)	726, 868, 1458, 1672, 1842, 1969
BstMAI	GTCTC	4 cut(s)	1224, 1272, 1310, 1636
BstMBI	GATC	6 cut(s)	723, 865, 1455, 1669, 1839, 1966
BstMWI	GCNNNNNNNGC	9 cut(s)	240, 713, 752, 1132, 1702, 1754, 2122, 2160, 2200
BstNI	CCWGG	2 cut(s)	1287, 2032
BstNSI	RCATGY	3 cut(s)	132, 1502, 1696
BstSCI	CCNGG	5 cut(s)	805, 1138, 1154, 1285, 2030
BstSFI	CTRYAG	1 cut(s)	2002
BstSNI	TACGTA	1 cut(s)	984
BstUI	CGCG	1 cut(s)	83
BstV1I	GCAGC	9 cut(s)	32, 535, 730, 742, 766, 769, 956, 1530, 2212
BstV2I	GAAGAC	1 cut(s)	1623
BstX2I	RGATCY	2 cut(s)	723, 1455
BstYI	RGATCY	2 cut(s)	723, 1455
Bsu36I	CCTNAGG	3 cut(s)	136, 2118, 2229
BsuI	GTATCC	1 cut(s)	869
BsuRI	GGCC	7 cut(s)	96, 189, 418, 603, 1070, 1240, 2035
BtsI	GCAGTG	2 cut(s)	1659, 1771
BtsIMutI	CAGTG	7 cut(s)	217, 563, 1018, 1326, 1659, 1771, 1821
BtuMI	TCGCGA	1 cut(s)	83
BveI	ACCTGC	1 cut(s)	1736
Cac8I	GCNNGC	6 cut(s)	73, 257, 361, 1694, 2037, 2182
CfoI	GCGC	2 cut(s)	511, 1937
Cfr13I	GGNCC	2 cut(s)	94, 849
CseI	GACGC	2 cut(s)	692, 1289
Csp6I	GTAC	9 cut(s)	132, 324, 478, 499, 652, 985, 1886, 1915, 2139
CspCI	CAANNNNNGTGG	2 cut(s)	505, 540
CviAII	CATG	6 cut(s)	129, 841, 899, 1499, 1596, 1693
CviQI	GTAC	9 cut(s)	132, 324, 478, 499, 652, 985, 1886, 1915, 2139
DdeI	CTNAG	7 cut(s)	136, 730, 1094, 1221, 2019, 2118, 2229
DpnI	GATC	6 cut(s)	725, 867, 1457, 1671, 1841, 1968
DpnII	GATC	6 cut(s)	723, 865, 1455, 1669, 1839, 1966
EaeI	YGGCCR	1 cut(s)	187
Eam1104I	CTCTTC	3 cut(s)	415, 952, 1652
EarI	CTCTTC	3 cut(s)	415, 952, 1652
EciI	GGCGGA	2 cut(s)	90, 979
Eco105I	TACGTA	1 cut(s)	984
Eco130I	CCWWGG	1 cut(s)	1379
Eco147I	AGGCCT	2 cut(s)	603, 1070
Eco31I	GGTCTC	1 cut(s)	1224
Eco32I	GATATC	1 cut(s)	1929
Eco47I	GGWCC	1 cut(s)	849
Eco57I	CTGAAG	3 cut(s)	372, 687, 1872
Eco81I	CCTNAGG	3 cut(s)	136, 2118, 2229
Eco88I	CYCGRG	2 cut(s)	1633, 2195
EcoNI	CCTNNNNNAGG	2 cut(s)	412, 1196
EcoRII	CCWGG	2 cut(s)	1285, 2030
EcoRV	GATATC	1 cut(s)	1929
EcoT14I	CCWWGG	1 cut(s)	1379
EcoT22I	ATGCAT	1 cut(s)	1108
ErhI	CCWWGG	1 cut(s)	1379
Esp3I	CGTCTC	1 cut(s)	1272
FaeI	CATG	6 cut(s)	132, 844, 902, 1502, 1599, 1696
FalI	AAGNNNNNCTT	2 cut(s)	713, 745
FaqI	GGGAC	1 cut(s)	546
FatI	CATG	6 cut(s)	128, 840, 898, 1498, 1595, 1692
FauI	CCCGC	2 cut(s)	205, 368
FauNDI	CATATG	1 cut(s)	1939
Fnu4HI	GCNGC	9 cut(s)	21, 549, 744, 756, 780, 783, 945, 1519, 2201
Fsp4HI	GCNGC	9 cut(s)	21, 549, 744, 756, 780, 783, 945, 1519, 2201
FspBI	CTAG	3 cut(s)	341, 495, 1760
GlaI	GCGC	2 cut(s)	510, 1936
GluI	GCNGC	9 cut(s)	21, 549, 744, 756, 780, 783, 945, 1519, 2201
GsaI	CCCAGC	3 cut(s)	319, 762, 1669
GsuI	CTGGAG	1 cut(s)	348
HaeIII	GGCC	7 cut(s)	96, 189, 418, 603, 1070, 1240, 2035
HapII	CCGG	5 cut(s)	806, 1003, 1140, 1155, 1776
HgaI	GACGC	2 cut(s)	692, 1289
HhaI	GCGC	2 cut(s)	511, 1937
Hin1I	GRCGYC	1 cut(s)	1281
Hin1II	CATG	6 cut(s)	132, 844, 902, 1502, 1599, 1696
Hin6I	GCGC	2 cut(s)	509, 1935
HinP1I	GCGC	2 cut(s)	509, 1935
HincII	GTYRAC	3 cut(s)	448, 1561, 2262
HindII	GTYRAC	3 cut(s)	448, 1561, 2262
HpaI	GTTAAC	1 cut(s)	1561
HpaII	CCGG	5 cut(s)	806, 1003, 1140, 1155, 1776
HphI	GGTGA	4 cut(s)	661, 674, 1717, 1728
Hpy166II	GTNNAC	7 cut(s)	157, 448, 538, 654, 1561, 1601, 2262
Hpy188I	TCNGA	6 cut(s)	352, 1111, 1234, 1455, 1787, 2089
Hpy188III	TCNNGA	7 cut(s)	82, 569, 869, 892, 1223, 1717, 1952
Hpy8I	GTNNAC	7 cut(s)	157, 448, 538, 654, 1561, 1601, 2262
Hpy99I	CGWCG	1 cut(s)	1893
HpyAV	CCTTC	8 cut(s)	104, 455, 514, 944, 1081, 1269, 1287, 1847
HpyCH4III	ACNGT	6 cut(s)	221, 558, 1013, 1622, 1753, 2043
HpyCH4IV	ACGT	3 cut(s)	983, 1563, 1917
HpyF10VI	GCNNNNNNNGC	9 cut(s)	240, 713, 752, 1132, 1702, 1754, 2122, 2160, 2200
HpyF3I	CTNAG	7 cut(s)	136, 730, 1094, 1221, 2019, 2118, 2229
HpySE526I	ACGT	3 cut(s)	983, 1563, 1917
Hsp92I	GRCGYC	1 cut(s)	1281
Hsp92II	CATG	6 cut(s)	132, 844, 902, 1502, 1599, 1696
HspAI	GCGC	2 cut(s)	509, 1935
KpnI	GGTACC	1 cut(s)	502
KspAI	GTTAAC	1 cut(s)	1561
Kzo9I	GATC	6 cut(s)	723, 865, 1455, 1669, 1839, 1966
LmnI	GCTCC	7 cut(s)	556, 762, 887, 1034, 1118, 1158, 2122
Lsp1109I	GCAGC	9 cut(s)	32, 535, 730, 742, 766, 769, 956, 1530, 2212
MaeI	CTAG	3 cut(s)	341, 495, 1760
MaeII	ACGT	3 cut(s)	983, 1563, 1917
MalI	GATC	6 cut(s)	725, 867, 1457, 1671, 1841, 1968
MbiI	CCGCTC	1 cut(s)	765
MboI	GATC	6 cut(s)	723, 865, 1455, 1669, 1839, 1966
MboII	GAAGA	9 cut(s)	365, 402, 718, 733, 794, 969, 976, 1628, 1669
MflI	RGATCY	2 cut(s)	723, 1455
MhlI	GDGCHC	3 cut(s)	1018, 1123, 1907
MlyI	GAGTC	3 cut(s)	71, 729, 2164
MmeI	TCCRAC	3 cut(s)	562, 1021, 2025
Mph1103I	ATGCAT	1 cut(s)	1108
MroXI	GAANNNNTTC	2 cut(s)	389, 725
MseI	TTAA	9 cut(s)	594, 996, 1164, 1560, 1584, 1818, 1895, 2256, 2278
MslI	CAYNNNNRTG	3 cut(s)	127, 1200, 1652
MspA1I	CMGCKG	1 cut(s)	1850
MspCI	CTTAAG	1 cut(s)	593
MspI	CCGG	5 cut(s)	806, 1003, 1140, 1155, 1776
MspR9I	CCNGG	5 cut(s)	807, 1140, 1156, 1287, 2032
Mva1269I	GAATGC	1 cut(s)	1417
MvaI	CCWGG	2 cut(s)	1287, 2032
MvnI	CGCG	1 cut(s)	83
MwoI	GCNNNNNNNGC	9 cut(s)	240, 713, 752, 1132, 1702, 1754, 2122, 2160, 2200
NciI	CCSGG	3 cut(s)	807, 1140, 1156
NdeI	CATATG	1 cut(s)	1939
NdeII	GATC	6 cut(s)	723, 865, 1455, 1669, 1839, 1966
NlaIII	CATG	6 cut(s)	132, 844, 902, 1502, 1599, 1696
NlaIV	GGNNCC	5 cut(s)	95, 500, 692, 1036, 1357
NmuCI	GTSAC	7 cut(s)	37, 215, 221, 667, 1175, 1807, 2167
NruI	TCGCGA	1 cut(s)	83
NsiI	ATGCAT	1 cut(s)	1108
NspI	RCATGY	3 cut(s)	132, 1502, 1696
NspV	TTCGAA	1 cut(s)	1990
PaeI	GCATGC	1 cut(s)	1696
PaqCI	CACCTGC	1 cut(s)	1736
PceI	AGGCCT	2 cut(s)	603, 1070
PciI	ACATGT	1 cut(s)	128
PctI	GAATGC	1 cut(s)	1417
PdmI	GAANNNNTTC	2 cut(s)	389, 725
PfeI	GAWTC	8 cut(s)	78, 895, 1229, 1592, 1680, 1782, 1826, 1987
PfoI	TCCNGGA	1 cut(s)	1138
PkrI	GCNGC	9 cut(s)	22, 550, 745, 757, 781, 784, 946, 1520, 2202
PleI	GAGTC	3 cut(s)	70, 729, 2164
PpsI	GAGTC	3 cut(s)	70, 729, 2164
Ppu21I	YACGTR	1 cut(s)	984
PscI	ACATGT	1 cut(s)	128
Psp1406I	AACGTT	1 cut(s)	1563
Psp6I	CCWGG	2 cut(s)	1285, 2030
PspFI	CCCAGC	3 cut(s)	315, 758, 1665
PspGI	CCWGG	2 cut(s)	1285, 2030
PspN4I	GGNNCC	5 cut(s)	95, 500, 692, 1036, 1357
PspPI	GGNCC	2 cut(s)	94, 849
PsuI	RGATCY	2 cut(s)	723, 1455
PvuII	CAGCTG	1 cut(s)	1850
RruI	TCGCGA	1 cut(s)	83
RsaI	GTAC	9 cut(s)	133, 325, 479, 500, 653, 986, 1887, 1916, 2140
RsaNI	GTAC	9 cut(s)	132, 324, 478, 499, 652, 985, 1886, 1915, 2139
RseI	CAYNNNNRTG	3 cut(s)	127, 1200, 1652
SaqAI	TTAA	9 cut(s)	594, 996, 1164, 1560, 1584, 1818, 1895, 2256, 2278
SatI	GCNGC	9 cut(s)	21, 549, 744, 756, 780, 783, 945, 1519, 2201
Sau3AI	GATC	6 cut(s)	723, 865, 1455, 1669, 1839, 1966
Sau96I	GGNCC	2 cut(s)	94, 849
ScaI	AGTACT	1 cut(s)	479
SchI	GAGTC	3 cut(s)	71, 729, 2164
ScrFI	CCNGG	5 cut(s)	807, 1140, 1156, 1287, 2032
SduI	GDGCHC	3 cut(s)	1018, 1123, 1907
SfcI	CTRYAG	1 cut(s)	2002
SfuI	TTCGAA	1 cut(s)	1990
SinI	GGWCC	1 cut(s)	849
SmiMI	CAYNNNNRTG	3 cut(s)	127, 1200, 1652
SmlI	CTYRAG	2 cut(s)	593, 750
SmoI	CTYRAG	2 cut(s)	593, 750
SnaBI	TACGTA	1 cut(s)	984
SphI	GCATGC	1 cut(s)	1696
SseBI	AGGCCT	2 cut(s)	603, 1070
SsiI	CCGC	5 cut(s)	75, 212, 361, 765, 990
SspMI	CTAG	3 cut(s)	341, 495, 1760
StuI	AGGCCT	2 cut(s)	603, 1070
StyD4I	CCNGG	5 cut(s)	805, 1138, 1154, 1285, 2030
StyI	CCWWGG	1 cut(s)	1379
TaaI	ACNGT	6 cut(s)	221, 558, 1013, 1622, 1753, 2043
TaiI	ACGT	3 cut(s)	986, 1566, 1920
TaqI	TCGA	2 cut(s)	453, 1990
TatI	WGTACW	3 cut(s)	477, 651, 2138
TfiI	GAWTC	8 cut(s)	78, 895, 1229, 1592, 1680, 1782, 1826, 1987
Tru1I	TTAA	9 cut(s)	594, 996, 1164, 1560, 1584, 1818, 1895, 2256, 2278
Tru9I	TTAA	9 cut(s)	594, 996, 1164, 1560, 1584, 1818, 1895, 2256, 2278
TscAI	CASTG	7 cut(s)	224, 563, 1018, 1333, 1659, 1771, 1828
TseFI	GTSAC	7 cut(s)	37, 215, 221, 667, 1175, 1807, 2167
TseI	GCWGC	9 cut(s)	20, 548, 743, 755, 779, 782, 944, 1518, 2200
Tsp45I	GTSAC	7 cut(s)	37, 215, 221, 667, 1175, 1807, 2167
TspDTI	ATGAA	5 cut(s)	123, 1242, 1251, 1584, 1925
TspRI	CASTG	7 cut(s)	224, 563, 1018, 1333, 1659, 1771, 1828
Vha464I	CTTAAG	1 cut(s)	593
VpaK11BI	GGWCC	1 cut(s)	849
XagI	CCTNNNNNAGG	2 cut(s)	412, 1196
XapI	RAATTY	3 cut(s)	817, 1685, 2076
XceI	RCATGY	3 cut(s)	132, 1502, 1696
XmnI	GAANNNNTTC	2 cut(s)	389, 725
XspI	CTAG	3 cut(s)	341, 495, 1760
ZrmI	AGTACT	1 cut(s)	479
Zsp2I	ATGCAT	1 cut(s)	1108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.