CDPK-related kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50530 AT3G50530 |
| fragaria_vesca | FvH4_1g15620 FvH4_1g15620 |
| malus_domestica | MD02G1168300.v1.1 MD15G1280600.v1.1 |
| prunus_persica | Prupe.7G136700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0104821 RchiOBHm_Chr2g0104961 |
| rosa_laevigata | RLG00000017360 RLG00000017361 RLG00000017379 |
| rosa_multiflora | Rmu_co8294349.1_g000001 Rmu_sc0001247.1_g000003 Rmu_sc0002645.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00138620 Rroxscaffold_2G00138750 Rroxscaffold_2G00138760 |
| rosa_rugosa | Rorug02G0123300 Rorug02G0124100 |
| rosa_samantha | Rh2AG173300 Rh2AG173400 Rh2AG174900 Rh2BG181000 Rh2BG182700 Rh2BG182800 Rh2CG178300 Rh2CG179400 Rh2DG179500 Rh2DG179600 Rh2DG181300 |
| rosa_wichuraiana | Rw2G013650 Rw2G013750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 533, 1186 |
| AciI | CCGC | 5 cut(s) | 533, 1165, 1184, 1550, 1786 |
| AclWI | GGATC | 4 cut(s) | 355, 669, 1097, 1175 |
| AcoI | YGGCCR | 1 cut(s) | 275 |
| AcsI | RAATTY | 3 cut(s) | 25, 841, 1538 |
| AcuI | CTGAAG | 4 cut(s) | 387, 402, 987, 1125 |
| AcyI | GRCGYC | 1 cut(s) | 74 |
| AdeI | CACNNNGTG | 1 cut(s) | 1705 |
| AfaI | GTAC | 5 cut(s) | 13, 743, 819, 991, 1692 |
| AflII | CTTAAG | 1 cut(s) | 1213 |
| AgeI | ACCGGT | 1 cut(s) | 1693 |
| AgsI | TTSAA | 6 cut(s) | 581, 729, 784, 880, 1276, 1514 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1662, 1694 |
| Alw21I | GWGCWC | 2 cut(s) | 101, 1510 |
| Alw26I | GTCTC | 3 cut(s) | 162, 297, 907 |
| AlwI | GGATC | 4 cut(s) | 355, 669, 1097, 1175 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 998 |
| AoxI | GGCC | 3 cut(s) | 275, 1127, 1681 |
| ApeKI | GCWGC | 4 cut(s) | 491, 1202, 1319, 1547 |
| ApoI | RAATTY | 3 cut(s) | 25, 841, 1538 |
| AsiGI | ACCGGT | 1 cut(s) | 1693 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 263, 724 |
| AspS9I | GGNCC | 1 cut(s) | 1682 |
| AsuHPI | GGTGA | 4 cut(s) | 125, 464, 521, 1556 |
| AsuII | TTCGAA | 2 cut(s) | 17, 1623 |
| BanII | GRGCYC | 1 cut(s) | 101 |
| BbsI | GAAGAC | 2 cut(s) | 218, 870 |
| Bbv12I | GWGCWC | 2 cut(s) | 101, 1510 |
| BbvI | GCAGC | 4 cut(s) | 478, 1189, 1306, 1559 |
| BccI | CCATC | 3 cut(s) | 679, 1581, 1727 |
| BceAI | ACGGC | 3 cut(s) | 262, 290, 582 |
| BcoDI | GTCTC | 3 cut(s) | 162, 297, 907 |
| BfaI | CTAG | 5 cut(s) | 1062, 1398, 1421, 1571, 1782 |
| BfrI | CTTAAG | 1 cut(s) | 1213 |
| BglII | AGATCT | 3 cut(s) | 224, 826, 980 |
| BisI | GCNGC | 6 cut(s) | 492, 1203, 1320, 1548, 1551, 1786 |
| BlpI | GCTNAGC | 1 cut(s) | 1742 |
| BlsI | GCNGC | 6 cut(s) | 493, 1204, 1321, 1549, 1552, 1787 |
| BmgT120I | GGNCC | 1 cut(s) | 1682 |
| BmiI | GGNNCC | 3 cut(s) | 1254, 1411, 1637 |
| BmsI | GCATC | 3 cut(s) | 640, 745, 1450 |
| BpiI | GAAGAC | 2 cut(s) | 218, 870 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1742 |
| Bpu14I | TTCGAA | 2 cut(s) | 17, 1623 |
| BpuEI | CTTGAG | 1 cut(s) | 1191 |
| Bsa29I | ATCGAT | 2 cut(s) | 1585, 1653 |
| BsaAI | YACGTR | 2 cut(s) | 910, 1478 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1303 |
| BsaHI | GRCGYC | 1 cut(s) | 74 |
| BsaI | GGTCTC | 1 cut(s) | 907 |
| BsaJI | CCNNGG | 2 cut(s) | 1124, 1223 |
| BsaWI | WCCGGW | 1 cut(s) | 1693 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 378, 408, 1000, 1030 |
| Bse118I | RCCGGY | 1 cut(s) | 1693 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1303 |
| BseCI | ATCGAT | 2 cut(s) | 1585, 1653 |
| BseDI | CCNNGG | 2 cut(s) | 1124, 1223 |
| BseGI | GGATG | 2 cut(s) | 760, 1219 |
| BseJI | GATNNNNATC | 1 cut(s) | 1303 |
| BseMII | CTCAG | 2 cut(s) | 1361, 1493 |
| BseRI | GAGGAG | 3 cut(s) | 276, 717, 764 |
| BseX3I | CGGCCG | 1 cut(s) | 275 |
| BseXI | GCAGC | 4 cut(s) | 478, 1189, 1306, 1559 |
| BsgI | GTGCAG | 1 cut(s) | 1566 |
| Bsh1236I | CGCG | 2 cut(s) | 533, 1186 |
| Bsh1285I | CGRYCG | 2 cut(s) | 278, 1052 |
| BshFI | GGCC | 3 cut(s) | 277, 1129, 1683 |
| BshTI | ACCGGT | 1 cut(s) | 1693 |
| BshVI | ATCGAT | 2 cut(s) | 1585, 1653 |
| BsiEI | CGRYCG | 2 cut(s) | 278, 1052 |
| BsiHKAI | GWGCWC | 2 cut(s) | 101, 1510 |
| BsiSI | CCGG | 6 cut(s) | 50, 71, 218, 230, 296, 1694 |
| BsmAI | GTCTC | 3 cut(s) | 162, 297, 907 |
| BsmBI | CGTCTC | 1 cut(s) | 297 |
| BsnI | GGCC | 3 cut(s) | 277, 1129, 1683 |
| Bso31I | GGTCTC | 1 cut(s) | 907 |
| Bsp119I | TTCGAA | 2 cut(s) | 17, 1623 |
| Bsp1286I | GDGCHC | 2 cut(s) | 101, 1510 |
| Bsp1407I | TGTACA | 1 cut(s) | 817 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1742 |
| Bsp19I | CCATGG | 1 cut(s) | 1223 |
| BspACI | CCGC | 5 cut(s) | 533, 1165, 1184, 1550, 1786 |
| BspANI | GGCC | 3 cut(s) | 277, 1129, 1683 |
| BspCNI | CTCAG | 2 cut(s) | 1362, 1494 |
| BspDI | ATCGAT | 2 cut(s) | 1585, 1653 |
| BspFNI | CGCG | 2 cut(s) | 533, 1186 |
| BspHI | TCATGA | 2 cut(s) | 664, 1647 |
| BspLI | GGNNCC | 3 cut(s) | 1254, 1411, 1637 |
| BspPI | GGATC | 4 cut(s) | 355, 669, 1097, 1175 |
| BspQI | GCTCTTC | 2 cut(s) | 106, 1515 |
| BspT104I | TTCGAA | 2 cut(s) | 17, 1623 |
| BspTI | CTTAAG | 1 cut(s) | 1213 |
| BspTNI | GGTCTC | 1 cut(s) | 907 |
| BsrFI | RCCGGY | 1 cut(s) | 1693 |
| BsrGI | TGTACA | 1 cut(s) | 817 |
| BssAI | RCCGGY | 1 cut(s) | 1693 |
| BssECI | CCNNGG | 2 cut(s) | 1124, 1223 |
| BssNI | GRCGYC | 1 cut(s) | 74 |
| BssT1I | CCWWGG | 2 cut(s) | 1124, 1223 |
| Bst4CI | ACNGT | 5 cut(s) | 766, 989, 1053, 1351, 1362 |
| Bst6I | CTCTTC | 2 cut(s) | 106, 1515 |
| BstACI | GRCGYC | 1 cut(s) | 74 |
| BstAFI | CTTAAG | 1 cut(s) | 1213 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1460 |
| BstAUI | TGTACA | 1 cut(s) | 817 |
| BstBAI | YACGTR | 2 cut(s) | 910, 1478 |
| BstBI | TTCGAA | 2 cut(s) | 17, 1623 |
| BstDEI | CTNAG | 6 cut(s) | 495, 1370, 1492, 1502, 1721, 1742 |
| BstDSI | CCRYGG | 1 cut(s) | 1223 |
| BstF5I | GGATG | 2 cut(s) | 760, 1219 |
| BstFNI | CGCG | 2 cut(s) | 533, 1186 |
| BstMAI | GTCTC | 3 cut(s) | 162, 297, 907 |
| BstMCI | CGRYCG | 2 cut(s) | 278, 1052 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 320, 1208, 1328, 1460, 1607 |
| BstUI | CGCG | 2 cut(s) | 533, 1186 |
| BstV1I | GCAGC | 4 cut(s) | 478, 1189, 1306, 1559 |
| BstV2I | GAAGAC | 2 cut(s) | 218, 870 |
| BstX2I | RGATCY | 4 cut(s) | 224, 826, 980, 1180 |
| BstYI | RGATCY | 4 cut(s) | 224, 826, 980, 1180 |
| BstZI | CGGCCG | 1 cut(s) | 275 |
| Bsu15I | ATCGAT | 2 cut(s) | 1585, 1653 |
| BsuRI | GGCC | 3 cut(s) | 277, 1129, 1683 |
| BsuTUI | ATCGAT | 2 cut(s) | 1585, 1653 |
| BtgI | CCRYGG | 1 cut(s) | 1223 |
| BtgZI | GCGATG | 1 cut(s) | 1478 |
| BtsCI | GGATG | 2 cut(s) | 760, 1219 |
| BtsI | GCAGTG | 1 cut(s) | 1710 |
| BtsIMutI | CAGTG | 2 cut(s) | 128, 1710 |
| CaiI | CAGNNNCTG | 1 cut(s) | 998 |
| CciI | TCATGA | 2 cut(s) | 664, 1647 |
| Cfr10I | RCCGGY | 1 cut(s) | 1693 |
| Cfr13I | GGNCC | 1 cut(s) | 1682 |
| ClaI | ATCGAT | 2 cut(s) | 1585, 1653 |
| CseI | GACGC | 2 cut(s) | 63, 1253 |
| Csp6I | GTAC | 5 cut(s) | 12, 742, 818, 990, 1691 |
| CspAI | ACCGGT | 1 cut(s) | 1693 |
| CviAII | CATG | 5 cut(s) | 332, 665, 1224, 1648, 1772 |
| CviQI | GTAC | 5 cut(s) | 12, 742, 818, 990, 1691 |
| DdeI | CTNAG | 6 cut(s) | 495, 1370, 1492, 1502, 1721, 1742 |
| DraI | TTTAAA | 1 cut(s) | 271 |
| DraIII | CACNNNGTG | 1 cut(s) | 1705 |
| EaeI | YGGCCR | 1 cut(s) | 275 |
| EagI | CGGCCG | 1 cut(s) | 275 |
| Eam1104I | CTCTTC | 2 cut(s) | 106, 1515 |
| EarI | CTCTTC | 2 cut(s) | 106, 1515 |
| Ecl136II | GAGCTC | 1 cut(s) | 99 |
| EclXI | CGGCCG | 1 cut(s) | 275 |
| Eco130I | CCWWGG | 2 cut(s) | 1124, 1223 |
| Eco24I | GRGCYC | 1 cut(s) | 101 |
| Eco31I | GGTCTC | 1 cut(s) | 907 |
| Eco52I | CGGCCG | 1 cut(s) | 275 |
| Eco53kI | GAGCTC | 1 cut(s) | 99 |
| Eco57I | CTGAAG | 4 cut(s) | 387, 402, 987, 1125 |
| EcoICRI | GAGCTC | 1 cut(s) | 99 |
| EcoRI | GAATTC | 2 cut(s) | 25, 1538 |
| EcoT14I | CCWWGG | 2 cut(s) | 1124, 1223 |
| EcoT38I | GRGCYC | 1 cut(s) | 101 |
| ErhI | CCWWGG | 2 cut(s) | 1124, 1223 |
| Esp3I | CGTCTC | 1 cut(s) | 297 |
| FaeI | CATG | 5 cut(s) | 335, 668, 1227, 1651, 1775 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 251, 283, 1730, 1762 |
| FatI | CATG | 5 cut(s) | 331, 664, 1223, 1647, 1771 |
| Fnu4HI | GCNGC | 6 cut(s) | 492, 1203, 1320, 1548, 1551, 1786 |
| FokI | GGATG | 2 cut(s) | 767, 1206 |
| FriOI | GRGCYC | 1 cut(s) | 101 |
| Fsp4HI | GCNGC | 6 cut(s) | 492, 1203, 1320, 1548, 1551, 1786 |
| FspBI | CTAG | 5 cut(s) | 1062, 1398, 1421, 1571, 1782 |
| GluI | GCNGC | 6 cut(s) | 492, 1203, 1320, 1548, 1551, 1786 |
| HaeIII | GGCC | 3 cut(s) | 277, 1129, 1683 |
| HapII | CCGG | 6 cut(s) | 50, 71, 218, 230, 296, 1694 |
| HgaI | GACGC | 2 cut(s) | 63, 1253 |
| Hin1I | GRCGYC | 1 cut(s) | 74 |
| Hin1II | CATG | 5 cut(s) | 335, 668, 1227, 1651, 1775 |
| HincII | GTYRAC | 1 cut(s) | 524 |
| HindII | GTYRAC | 1 cut(s) | 524 |
| HindIII | AAGCTT | 2 cut(s) | 409, 1739 |
| HinfI | GANTC | 8 cut(s) | 80, 214, 253, 264, 1070, 1077, 1235, 1472 |
| HpaII | CCGG | 6 cut(s) | 50, 71, 218, 230, 296, 1694 |
| HphI | GGTGA | 4 cut(s) | 125, 464, 521, 1556 |
| Hpy166II | GTNNAC | 6 cut(s) | 65, 524, 744, 820, 1564, 1699 |
| Hpy188III | TCNNGA | 8 cut(s) | 665, 729, 1074, 1421, 1484, 1580, 1648, 1712 |
| Hpy8I | GTNNAC | 6 cut(s) | 65, 524, 744, 820, 1564, 1699 |
| Hpy99I | CGWCG | 3 cut(s) | 358, 568, 1247 |
| HpyCH4III | ACNGT | 5 cut(s) | 766, 989, 1053, 1351, 1362 |
| HpyCH4IV | ACGT | 2 cut(s) | 909, 1477 |
| HpyCH4V | TGCA | 7 cut(s) | 575, 758, 808, 950, 976, 1322, 1547 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 320, 1208, 1328, 1460, 1607 |
| HpyF3I | CTNAG | 6 cut(s) | 495, 1370, 1492, 1502, 1721, 1742 |
| HpySE526I | ACGT | 2 cut(s) | 909, 1477 |
| Hsp92I | GRCGYC | 1 cut(s) | 74 |
| Hsp92II | CATG | 5 cut(s) | 335, 668, 1227, 1651, 1775 |
| LguI | GCTCTTC | 2 cut(s) | 106, 1515 |
| Lsp1109I | GCAGC | 4 cut(s) | 478, 1189, 1306, 1559 |
| LweI | GCATC | 3 cut(s) | 640, 745, 1450 |
| MaeI | CTAG | 5 cut(s) | 1062, 1398, 1421, 1571, 1782 |
| MaeII | ACGT | 2 cut(s) | 909, 1477 |
| MaeIII | GTNAC | 1 cut(s) | 127 |
| MfeI | CAATTG | 2 cut(s) | 576, 875 |
| MflI | RGATCY | 4 cut(s) | 224, 826, 980, 1180 |
| MhlI | GDGCHC | 2 cut(s) | 101, 1510 |
| MlyI | GAGTC | 4 cut(s) | 208, 247, 1229, 1466 |
| MmeI | TCCRAC | 1 cut(s) | 376 |
| MroXI | GAANNNNTTC | 2 cut(s) | 263, 724 |
| MseI | TTAA | 8 cut(s) | 108, 270, 501, 537, 831, 1196, 1214, 1325 |
| MslI | CAYNNNNRTG | 3 cut(s) | 645, 669, 1731 |
| MspA1I | CMGCKG | 2 cut(s) | 1202, 1550 |
| MspCI | CTTAAG | 1 cut(s) | 1213 |
| MspI | CCGG | 6 cut(s) | 50, 71, 218, 230, 296, 1694 |
| MunI | CAATTG | 2 cut(s) | 576, 875 |
| MvnI | CGCG | 2 cut(s) | 533, 1186 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 320, 1208, 1328, 1460, 1607 |
| NcoI | CCATGG | 1 cut(s) | 1223 |
| NlaIII | CATG | 5 cut(s) | 335, 668, 1227, 1651, 1775 |
| NlaIV | GGNNCC | 3 cut(s) | 1254, 1411, 1637 |
| NspV | TTCGAA | 2 cut(s) | 17, 1623 |
| PagI | TCATGA | 2 cut(s) | 664, 1647 |
| PciSI | GCTCTTC | 2 cut(s) | 106, 1515 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 248 |
| PdmI | GAANNNNTTC | 2 cut(s) | 263, 724 |
| PfeI | GAWTC | 4 cut(s) | 80, 264, 1070, 1077 |
| PinAI | ACCGGT | 1 cut(s) | 1693 |
| PkrI | GCNGC | 6 cut(s) | 493, 1204, 1321, 1549, 1552, 1787 |
| PleI | GAGTC | 4 cut(s) | 208, 247, 1229, 1466 |
| PpsI | GAGTC | 4 cut(s) | 208, 247, 1229, 1466 |
| Ppu21I | YACGTR | 2 cut(s) | 910, 1478 |
| Psp124BI | GAGCTC | 1 cut(s) | 101 |
| PspN4I | GGNNCC | 3 cut(s) | 1254, 1411, 1637 |
| PspPI | GGNCC | 1 cut(s) | 1682 |
| PstNI | CAGNNNCTG | 1 cut(s) | 998 |
| PsuI | RGATCY | 4 cut(s) | 224, 826, 980, 1180 |
| PvuII | CAGCTG | 1 cut(s) | 1202 |
| RsaI | GTAC | 5 cut(s) | 13, 743, 819, 991, 1692 |
| RsaNI | GTAC | 5 cut(s) | 12, 742, 818, 990, 1691 |
| RseI | CAYNNNNRTG | 3 cut(s) | 645, 669, 1731 |
| SacI | GAGCTC | 1 cut(s) | 101 |
| SapI | GCTCTTC | 2 cut(s) | 106, 1515 |
| SaqAI | TTAA | 8 cut(s) | 108, 270, 501, 537, 831, 1196, 1214, 1325 |
| SatI | GCNGC | 6 cut(s) | 492, 1203, 1320, 1548, 1551, 1786 |
| Sau96I | GGNCC | 1 cut(s) | 1682 |
| SchI | GAGTC | 4 cut(s) | 208, 247, 1229, 1466 |
| SduI | GDGCHC | 2 cut(s) | 101, 1510 |
| SfaNI | GCATC | 3 cut(s) | 640, 745, 1450 |
| SfuI | TTCGAA | 2 cut(s) | 17, 1623 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 645, 669, 1731 |
| SmlI | CTYRAG | 2 cut(s) | 1206, 1213 |
| SmoI | CTYRAG | 2 cut(s) | 1206, 1213 |
| SsiI | CCGC | 5 cut(s) | 533, 1165, 1184, 1550, 1786 |
| SspI | AATATT | 1 cut(s) | 780 |
| SspMI | CTAG | 5 cut(s) | 1062, 1398, 1421, 1571, 1782 |
| SstI | GAGCTC | 1 cut(s) | 101 |
| StyI | CCWWGG | 2 cut(s) | 1124, 1223 |
| TaaI | ACNGT | 5 cut(s) | 766, 989, 1053, 1351, 1362 |
| TaiI | ACGT | 2 cut(s) | 912, 1480 |
| TaqI | TCGA | 8 cut(s) | 17, 95, 242, 251, 1337, 1585, 1623, 1653 |
| TatI | WGTACW | 4 cut(s) | 11, 741, 817, 989 |
| TauI | GCSGC | 2 cut(s) | 1553, 1788 |
| TfiI | GAWTC | 4 cut(s) | 80, 264, 1070, 1077 |
| Tru1I | TTAA | 8 cut(s) | 108, 270, 501, 537, 831, 1196, 1214, 1325 |
| Tru9I | TTAA | 8 cut(s) | 108, 270, 501, 537, 831, 1196, 1214, 1325 |
| TscAI | CASTG | 2 cut(s) | 128, 1710 |
| TseI | GCWGC | 4 cut(s) | 491, 1202, 1319, 1547 |
| TspDTI | ATGAA | 7 cut(s) | 18, 159, 471, 1371, 1460, 1481, 1671 |
| TspGWI | ACGGA | 6 cut(s) | 73, 94, 150, 279, 1301, 1422 |
| TspRI | CASTG | 2 cut(s) | 128, 1710 |
| Vha464I | CTTAAG | 1 cut(s) | 1213 |
| XapI | RAATTY | 3 cut(s) | 25, 841, 1538 |
| XbaI | TCTAGA | 1 cut(s) | 1420 |
| XmnI | GAANNNNTTC | 2 cut(s) | 263, 724 |
| XspI | CTAG | 5 cut(s) | 1062, 1398, 1421, 1571, 1782 |