Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003974

Physical Location & Seq

Genomic Coordinates Forward (+)

16215394 .. 16219613

Gene Structure 4220 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ47920

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGGGTCTCTGCACCTCCAAACCCTCGTTCCCCAACTCCATCACTTCGTCTCCGCAGTCCGATTCTCAGGTCGGGAAAGATCCGGTGAAGGTCAATTCGAGCTCCGGCGATGTCGAAAACCCTAGAAATGAGCAGAACGGAGAGAAGGTCGAGGAGGAGACTGTGATCGCCGTCAAGAAGTCGCCTTTTTTTCCGTTCTACAGTCCGAGTCCGGCGCACTACTTCTTCTCCTCGAAGAAGTCTCCGGCGAGATCTCCGGCGAATGCCAGCGCGAAGTCGACGCCGAGCCGGTTCTTCAAGCGGCCGTTCCCGCCGCCGTCGCCGGCGAAGCACATAAGGGCGCTGCTGGCGCGGCGGCACGGGACGGTGAAGCCGAACGAGGCGATTCCGGAGGGGAGTGAGGTTGAGGGAGGTGTGACTGGGCTTGATAAGAGCTTTGGGTTCTCTAAGCATTTGAGTAACAAGTATGAGCTCGGTGAAGAGGTTGGCCGAGGGCATTTTGGGTATACTTGCAAAGCTACCTTCAAGAAGGGAGAGCTCAAGGGCCAGCAGGTTGCTGTCAAAGTAATCCCCAAAGTCAAGATGACTACTGCAATTGCCATTGAGGATGTGAGAAGGGAAGTCAAGATATTGAAAGCTTTGACCGGGCATAGCAATCTAGTTCAGTTTTATGATGCATACGAAGACCATGATAATGTCTACATAGTTATGGAACTGTGCGAAGGAGGGGAGCTCTTAGATAGGATACTTGCAAGGGGTGGGAAATATACAGAGGAAGATGCAAGGACTGTGATGATACAAATATTAAATGTTGTCGCGTTTTGCCACCTCCAGGGCGTGGTCCATCGAGATCTTAAGCCAGAGAATTTTCTGTTTACATCGAATGATGAAGATTCACAGTTGAAGGCTATAGACTTTGGCCTTTCAGATTTTGTGAAACCAGATGAAAGGCTTAACGACATTGTTGGTAGTGCATACTATGTAGCCCCCGAAGTGTTACATAGGGCTTATGGTACAGAGGCTGATGTCTGGAGCGTAGGTGTGATTGCATACATTCTATTGTGTGGCAGCCGTCCATTTTGGGCTCGAACTGAGTCTGGCATTTTTCGGGCAGTTCTAAAAGCTGATCCAAGTTTTGATGAAACACCTTGGCCAACTCTCTCTACAGAGGCAAAAGATTTTGTCAAGCGCCTATTGAATAAAGACCCACGGAAAAGAATGACAGCTGCACAAGCGTTAAGTCATCCCTGGCTTAAAAATTATAGCACTGTTAAAATTCCTCTGGACATATTAATATTCAAGCTCATGAAGGTTTATATGCGCTCATCACCTCTCCGCAAAACTGCTTTAAGGGCTCTTTCCAAGACATTGACTGTTGATGAGCTTTGCTATTTGAAGGAGCAGTTTGCGCTTTTAGAACCAAACAAAAATGGCACAATAAGCTTAGAAAACATCAAAACGGCCTTGATGAAAAATGCAACTGATGCAATGAAGGAGGCACGAATTGCTGATTTTCTAGCATCGCTTAATGCATTGCAATACAGAAGGATGGATTTTGAGGAATTTTGTACAGCTGCACTAAGTGTCCACCAACTTGAGGCTCTGGACCATTGGGAGCAACATGCTCGTTGTGCATATGAACTTTTTGACAAGGAAGGCAACAGGGCTATTGTCATTGAGGAACTGGCTTCGGAACTTGGTCTTGGCCCTTCTGTCCCTGTTCATGCGGTTCTTCATGATTGGATTAGGCACACCGACGGGAAGCTGAGTTTCCTTGGATTTGTGAAATTGTTGCATGGCGTATCTGGCCGGGTTGTTGCAAAAGCTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

610

Amino Acids

68.05

Weight (kDa)

8.52

Isoelectric Point (pI)

43.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	156 - 418	1.1e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	157 - 411	1.4e-34	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003974)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50530 AT3G50530
fragaria_vesca	FvH4_1g15620 FvH4_1g15620
malus_domestica	MD02G1168300.v1.1 MD15G1280600.v1.1
prunus_persica	Prupe.7G136700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0104821 RchiOBHm_Chr2g0104961
rosa_laevigata	RLG00000017360 RLG00000017361 RLG00000017379
rosa_multiflora	Rmu_co8294349.1_g000001 Rmu_sc0001247.1_g000003 Rmu_sc0002645.1_g000007
rosa_roxburghii	Rroxscaffold_2G00138620 Rroxscaffold_2G00138750 Rroxscaffold_2G00138760
rosa_rugosa	Rorug02G0123300 Rorug02G0124100
rosa_samantha	Rh2AG173300 Rh2AG173400 Rh2AG174900 Rh2BG181000 Rh2BG182700 Rh2BG182800 Rh2CG178300 Rh2CG179400 Rh2DG179500 Rh2DG179600 Rh2DG181300
rosa_wichuraiana	Rw2G013650 Rw2G013750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	541
AccB7I	CCANNNNNTGG	1 cut(s)	838
AccI	GTMKAC	3 cut(s)	278, 506, 699
AccII	CGCG	3 cut(s)	272, 352, 818
AccIII	TCCGGA	1 cut(s)	388
AciI	CCGC	8 cut(s)	53, 301, 311, 314, 352, 355, 1336, 1727
AclWI	GGATC	2 cut(s)	74, 1121
AcoI	YGGCCR	4 cut(s)	302, 487, 1151, 1807
AcsI	RAATTY	3 cut(s)	865, 1275, 1562
AcyI	GRCGYC	1 cut(s)	281
AdeI	CACNNNGTG	1 cut(s)	1583
AfaI	GTAC	2 cut(s)	1015, 1570
AfiI	CCNNNNNNNGG	3 cut(s)	832, 838, 1597
AflII	CTTAAG	1 cut(s)	854
AgsI	TTSAA	7 cut(s)	298, 526, 634, 904, 1198, 1300, 1396
AjnI	CCWGG	2 cut(s)	831, 1247
AjuI	GAANNNNNNNTTGG	4 cut(s)	11, 43, 1686, 1718
Alw21I	GWGCWC	4 cut(s)	104, 474, 540, 735
Alw26I	GTCTC	4 cut(s)	11, 54, 152, 246
AlwI	GGATC	2 cut(s)	74, 1121
AlwNI	CAGNNNCTG	1 cut(s)	1022
Aor13HI	TCCGGA	1 cut(s)	388
AoxI	GGCC	8 cut(s)	302, 487, 544, 919, 1151, 1461, 1705, 1807
ApeKI	GCWGC	4 cut(s)	343, 1068, 1226, 1574
ApoI	RAATTY	3 cut(s)	865, 1275, 1562
AseI	ATTAAT	1 cut(s)	1292
AspLEI	GCGC	7 cut(s)	217, 272, 343, 352, 1191, 1323, 1411
AspS9I	GGNCC	4 cut(s)	544, 841, 1606, 1706
AsuC2I	CCSGG	2 cut(s)	646, 1811
AsuHPI	GGTGA	4 cut(s)	97, 379, 488, 1320
AvaII	GGWCC	2 cut(s)	841, 1606
BalI	TGGCCA	1 cut(s)	1153
BanII	GRGCYC	6 cut(s)	104, 474, 540, 735, 1087, 1357
BbsI	GAAGAC	1 cut(s)	690
Bbv12I	GWGCWC	4 cut(s)	104, 474, 540, 735
BbvI	GCAGC	4 cut(s)	330, 1080, 1213, 1561
BccI	CCATC	3 cut(s)	47, 852, 1543
BceAI	ACGGC	5 cut(s)	155, 289, 301, 1056, 1476
BcgI	CGANNNNNNTGC	2 cut(s)	1607, 1641
BciT130I	CCWGG	2 cut(s)	833, 1249
BciVI	GTATCC	1 cut(s)	738
BcnI	CCSGG	2 cut(s)	646, 1811
BcoDI	GTCTC	4 cut(s)	11, 54, 152, 246
BfaI	CTAG	3 cut(s)	123, 659, 1517
BfmI	CTRYAG	3 cut(s)	199, 909, 1164
BfoI	RGCGCY	2 cut(s)	344, 1192
BfrI	CTTAAG	1 cut(s)	854
BfuAI	ACCTGC	1 cut(s)	541
BfuI	GTATCC	1 cut(s)	738
BglII	AGATCT	2 cut(s)	251, 850
BisI	GCNGC	8 cut(s)	302, 314, 344, 353, 356, 1069, 1227, 1575
BlsI	GCNGC	8 cut(s)	303, 315, 345, 354, 357, 1070, 1228, 1576
Bme1390I	CCNGG	4 cut(s)	646, 833, 1249, 1811
Bme18I	GGWCC	2 cut(s)	841, 1606
BmgT120I	GGNCC	4 cut(s)	544, 841, 1606, 1706
BmrFI	CCNGG	4 cut(s)	646, 833, 1249, 1811
BmrI	ACTGGG	1 cut(s)	429
BmsI	GCATC	4 cut(s)	664, 769, 1474, 1529
BmuI	ACTGGG	1 cut(s)	429
BpiI	GAAGAC	1 cut(s)	690
BplI	GAGNNNNNCTC	2 cut(s)	717, 749
BpmI	CTGGAG	2 cut(s)	815, 1051
BpuEI	CTTGAG	2 cut(s)	524, 1616
BpuMI	CCSGG	2 cut(s)	646, 1811
BsaHI	GRCGYC	1 cut(s)	281
BsaI	GGTCTC	1 cut(s)	11
BsaJI	CCNNGG	6 cut(s)	490, 832, 1148, 1208, 1247, 1774
BsaWI	WCCGGW	2 cut(s)	82, 388
BsaXI	ACNNNNNCTCC	8 cut(s)	34, 64, 132, 162, 212, 242, 1024, 1054
Bsc4I	CCNNNNNNNGG	3 cut(s)	832, 838, 1597
Bse118I	RCCGGY	2 cut(s)	288, 322
Bse1I	ACTGG	2 cut(s)	424, 1689
Bse3DI	GCAATG	2 cut(s)	1494, 1532
BseAI	TCCGGA	1 cut(s)	388
BseBI	CCWGG	2 cut(s)	833, 1249
BseDI	CCNNGG	6 cut(s)	490, 832, 1148, 1208, 1247, 1774
BseGI	GGATG	3 cut(s)	613, 1243, 1554
BseLI	CCNNNNNNNGG	3 cut(s)	832, 838, 1597
BseMI	GCAATG	2 cut(s)	1494, 1532
BseMII	CTCAG	3 cut(s)	80, 1083, 1757
BseNI	ACTGG	2 cut(s)	424, 1689
BseRI	GAGGAG	3 cut(s)	167, 170, 220
BseX3I	CGGCCG	1 cut(s)	302
BseXI	GCAGC	4 cut(s)	330, 1080, 1213, 1561
BsgI	GTGCAG	2 cut(s)	1212, 1560
Bsh1236I	CGCG	3 cut(s)	272, 352, 818
Bsh1285I	CGRYCG	1 cut(s)	305
BshFI	GGCC	8 cut(s)	304, 489, 546, 921, 1153, 1463, 1707, 1809
BsiEI	CGRYCG	1 cut(s)	305
BsiHKAI	GWGCWC	4 cut(s)	104, 474, 540, 735
BslFI	GGGAC	2 cut(s)	376, 1700
BslI	CCNNNNNNNGG	3 cut(s)	832, 838, 1597
BsmAI	GTCTC	4 cut(s)	11, 54, 152, 246
BsmBI	CGTCTC	1 cut(s)	54
BsmFI	GGGAC	2 cut(s)	376, 1700
BsmI	GAATGC	1 cut(s)	268
BsnI	GGCC	8 cut(s)	304, 489, 546, 921, 1153, 1463, 1707, 1809
Bso31I	GGTCTC	1 cut(s)	11
Bsp1286I	GDGCHC	6 cut(s)	104, 474, 540, 735, 1087, 1357
Bsp13I	TCCGGA	1 cut(s)	388
Bsp1407I	TGTACA	1 cut(s)	1568
Bsp143I	GATC	5 cut(s)	79, 165, 251, 850, 1126
BspACI	CCGC	8 cut(s)	53, 301, 311, 314, 352, 355, 1336, 1727
BspANI	GGCC	8 cut(s)	304, 489, 546, 921, 1153, 1463, 1707, 1809
BspCNI	CTCAG	3 cut(s)	79, 1084, 1758
BspEI	TCCGGA	1 cut(s)	388
BspFNI	CGCG	3 cut(s)	272, 352, 818
BspHI	TCATGA	2 cut(s)	1305, 1735
BspMI	ACCTGC	1 cut(s)	541
BspPI	GGATC	2 cut(s)	74, 1121
BspTI	CTTAAG	1 cut(s)	854
BspTNI	GGTCTC	1 cut(s)	11
BsrDI	GCAATG	2 cut(s)	1494, 1532
BsrFI	RCCGGY	2 cut(s)	288, 322
BsrGI	TGTACA	1 cut(s)	1568
BsrI	ACTGG	2 cut(s)	424, 1689
BssAI	RCCGGY	2 cut(s)	288, 322
BssECI	CCNNGG	6 cut(s)	490, 832, 1148, 1208, 1247, 1774
BssMI	GATC	5 cut(s)	79, 165, 251, 850, 1126
BssNAI	GTATAC	1 cut(s)	507
BssNI	GRCGYC	1 cut(s)	281
BssT1I	CCWWGG	2 cut(s)	1148, 1774
Bst1107I	GTATAC	1 cut(s)	507
Bst2UI	CCWGG	2 cut(s)	833, 1249
Bst4CI	ACNGT	8 cut(s)	163, 203, 367, 717, 790, 900, 1270, 1375
Bst6I	CTCTTC	1 cut(s)	474
BstACI	GRCGYC	1 cut(s)	281
BstAFI	CTTAAG	1 cut(s)	854
BstAPI	GCANNNNNTGC	2 cut(s)	1484, 1505
BstAUI	TGTACA	1 cut(s)	1568
BstC8I	GCNNGC	4 cut(s)	268, 324, 348, 548
BstDEI	CTNAG	7 cut(s)	66, 447, 736, 1092, 1444, 1580, 1766
BstDSI	CCRYGG	1 cut(s)	1208
BstF5I	GGATG	3 cut(s)	613, 1243, 1554
BstFNI	CGCG	3 cut(s)	272, 352, 818
BstH2I	RGCGCY	2 cut(s)	344, 1192
BstHHI	GCGC	7 cut(s)	217, 272, 343, 352, 1191, 1323, 1411
BstKTI	GATC	5 cut(s)	82, 168, 254, 853, 1129
BstMAI	GTCTC	4 cut(s)	11, 54, 152, 246
BstMBI	GATC	5 cut(s)	79, 165, 251, 850, 1126
BstMCI	CGRYCG	1 cut(s)	305
BstNI	CCWGG	2 cut(s)	833, 1249
BstNSI	RCATGY	1 cut(s)	1625
BstSCI	CCNGG	4 cut(s)	644, 831, 1247, 1809
BstSFI	CTRYAG	3 cut(s)	199, 909, 1164
BstUI	CGCG	3 cut(s)	272, 352, 818
BstV1I	GCAGC	4 cut(s)	330, 1080, 1213, 1561
BstV2I	GAAGAC	1 cut(s)	690
BstX2I	RGATCY	3 cut(s)	79, 251, 850
BstYI	RGATCY	3 cut(s)	79, 251, 850
BstZ17I	GTATAC	1 cut(s)	507
BstZI	CGGCCG	1 cut(s)	302
BsuI	GTATCC	1 cut(s)	738
BsuRI	GGCC	8 cut(s)	304, 489, 546, 921, 1153, 1463, 1707, 1809
BtgI	CCRYGG	1 cut(s)	1208
BtgZI	GCGATG	2 cut(s)	123, 1506
BtsCI	GGATG	3 cut(s)	613, 1243, 1554
BtsIMutI	CAGTG	1 cut(s)	1266
BveI	ACCTGC	1 cut(s)	541
Cac8I	GCNNGC	4 cut(s)	268, 324, 348, 548
CaiI	CAGNNNCTG	1 cut(s)	1022
CciI	TCATGA	2 cut(s)	1305, 1735
CfoI	GCGC	7 cut(s)	217, 272, 343, 352, 1191, 1323, 1411
Cfr10I	RCCGGY	2 cut(s)	288, 322
Cfr13I	GGNCC	4 cut(s)	544, 841, 1606, 1706
CseI	GACGC	1 cut(s)	289
Csp6I	GTAC	2 cut(s)	1014, 1569
CviAII	CATG	6 cut(s)	689, 1306, 1622, 1724, 1736, 1796
CviQI	GTAC	2 cut(s)	1014, 1569
DdeI	CTNAG	7 cut(s)	66, 447, 736, 1092, 1444, 1580, 1766
DpnI	GATC	5 cut(s)	81, 167, 253, 852, 1128
DpnII	GATC	5 cut(s)	79, 165, 251, 850, 1126
DraIII	CACNNNGTG	1 cut(s)	1583
EaeI	YGGCCR	4 cut(s)	302, 487, 1151, 1807
EagI	CGGCCG	1 cut(s)	302
Eam1104I	CTCTTC	1 cut(s)	474
EarI	CTCTTC	1 cut(s)	474
Ecl136II	GAGCTC	4 cut(s)	102, 472, 538, 733
EclXI	CGGCCG	1 cut(s)	302
Eco130I	CCWWGG	2 cut(s)	1148, 1774
Eco24I	GRGCYC	6 cut(s)	104, 474, 540, 735, 1087, 1357
Eco31I	GGTCTC	1 cut(s)	11
Eco47I	GGWCC	2 cut(s)	841, 1606
Eco52I	CGGCCG	1 cut(s)	302
Eco53kI	GAGCTC	4 cut(s)	102, 472, 538, 733
EcoICRI	GAGCTC	4 cut(s)	102, 472, 538, 733
EcoRII	CCWGG	2 cut(s)	831, 1247
EcoT14I	CCWWGG	2 cut(s)	1148, 1774
EcoT22I	ATGCAT	2 cut(s)	679, 1534
EcoT38I	GRGCYC	6 cut(s)	104, 474, 540, 735, 1087, 1357
ErhI	CCWWGG	2 cut(s)	1148, 1774
Esp3I	CGTCTC	1 cut(s)	54
FaeI	CATG	6 cut(s)	692, 1309, 1625, 1727, 1739, 1799
FaqI	GGGAC	2 cut(s)	376, 1700
FatI	CATG	6 cut(s)	688, 1305, 1621, 1723, 1735, 1795
FauI	CCCGC	1 cut(s)	318
FauNDI	CATATG	1 cut(s)	1636
FblI	GTMKAC	3 cut(s)	278, 506, 699
Fnu4HI	GCNGC	8 cut(s)	302, 314, 344, 353, 356, 1069, 1227, 1575
FokI	GGATG	3 cut(s)	620, 1230, 1561
FriOI	GRGCYC	6 cut(s)	104, 474, 540, 735, 1087, 1357
Fsp4HI	GCNGC	8 cut(s)	302, 314, 344, 353, 356, 1069, 1227, 1575
FspBI	CTAG	3 cut(s)	123, 659, 1517
GlaI	GCGC	7 cut(s)	216, 271, 342, 351, 1190, 1322, 1410
GluI	GCNGC	8 cut(s)	302, 314, 344, 353, 356, 1069, 1227, 1575
GsuI	CTGGAG	2 cut(s)	815, 1051
HaeII	RGCGCY	2 cut(s)	344, 1192
HaeIII	GGCC	8 cut(s)	304, 489, 546, 921, 1153, 1463, 1707, 1809
HgaI	GACGC	1 cut(s)	289
HhaI	GCGC	7 cut(s)	217, 272, 343, 352, 1191, 1323, 1411
Hin1I	GRCGYC	1 cut(s)	281
Hin1II	CATG	6 cut(s)	692, 1309, 1625, 1727, 1739, 1799
Hin6I	GCGC	7 cut(s)	215, 270, 341, 350, 1189, 1321, 1409
HinP1I	GCGC	7 cut(s)	215, 270, 341, 350, 1189, 1321, 1409
HincII	GTYRAC	1 cut(s)	279
HindII	GTYRAC	1 cut(s)	279
HindIII	AAGCTT	2 cut(s)	636, 1441
HinfI	GANTC	5 cut(s)	62, 208, 385, 893, 1094
HphI	GGTGA	4 cut(s)	97, 379, 488, 1320
Hpy166II	GTNNAC	5 cut(s)	279, 507, 700, 876, 1588
Hpy188I	TCNGA	4 cut(s)	61, 207, 928, 1693
Hpy8I	GTNNAC	5 cut(s)	279, 507, 700, 876, 1588
Hpy99I	CGWCG	3 cut(s)	283, 322, 1760
HpyCH4III	ACNGT	8 cut(s)	163, 203, 367, 717, 790, 900, 1270, 1375
HpyF3I	CTNAG	7 cut(s)	66, 447, 736, 1092, 1444, 1580, 1766
Hsp92I	GRCGYC	1 cut(s)	281
Hsp92II	CATG	6 cut(s)	692, 1309, 1625, 1727, 1739, 1799
HspAI	GCGC	7 cut(s)	215, 270, 341, 350, 1189, 1321, 1409
Kpn2I	TCCGGA	1 cut(s)	388
KroI	GCCGGC	1 cut(s)	322
KroNI	GCCGGC	1 cut(s)	324
Kzo9I	GATC	5 cut(s)	79, 165, 251, 850, 1126
LmnI	GCTCC	5 cut(s)	107, 730, 1032, 1399, 1615
Lsp1109I	GCAGC	4 cut(s)	330, 1080, 1213, 1561
LweI	GCATC	4 cut(s)	664, 769, 1474, 1529
MaeI	CTAG	3 cut(s)	123, 659, 1517
MaeIII	GTNAC	3 cut(s)	415, 458, 996
MalI	GATC	5 cut(s)	81, 167, 253, 852, 1128
MboI	GATC	5 cut(s)	79, 165, 251, 850, 1126
MboII	GAAGA	8 cut(s)	217, 247, 286, 491, 695, 788, 902, 1724
MfeI	CAATTG	1 cut(s)	594
MflI	RGATCY	3 cut(s)	79, 251, 850
MhlI	GDGCHC	6 cut(s)	104, 474, 540, 735, 1087, 1357
MlsI	TGGCCA	1 cut(s)	1153
MluCI	AATT	8 cut(s)	94, 594, 865, 1258, 1275, 1503, 1562, 1787
MluNI	TGGCCA	1 cut(s)	1153
MlyI	GAGTC	2 cut(s)	217, 1103
Mox20I	TGGCCA	1 cut(s)	1153
Mph1103I	ATGCAT	2 cut(s)	679, 1534
MreI	CGCCGGCG	1 cut(s)	322
MroI	TCCGGA	1 cut(s)	388
MroNI	GCCGGC	1 cut(s)	322
MscI	TGGCCA	1 cut(s)	1153
MseI	TTAA	9 cut(s)	806, 855, 954, 1238, 1254, 1272, 1292, 1349, 1527
MslI	CAYNNNNRTG	2 cut(s)	693, 707
Msp20I	TGGCCA	1 cut(s)	1153
MspA1I	CMGCKG	2 cut(s)	1226, 1574
MspCI	CTTAAG	1 cut(s)	854
MspR9I	CCNGG	4 cut(s)	646, 833, 1249, 1811
MunI	CAATTG	1 cut(s)	594
Mva1269I	GAATGC	1 cut(s)	268
MvaI	CCWGG	2 cut(s)	833, 1249
MvnI	CGCG	3 cut(s)	272, 352, 818
NaeI	GCCGGC	1 cut(s)	324
NciI	CCSGG	2 cut(s)	646, 1811
NdeI	CATATG	1 cut(s)	1636
NdeII	GATC	5 cut(s)	79, 165, 251, 850, 1126
NgoMIV	GCCGGC	1 cut(s)	322
NlaIII	CATG	6 cut(s)	692, 1309, 1625, 1727, 1739, 1799
NmeAIII	GCCGAG	2 cut(s)	309, 515
NmuCI	GTSAC	1 cut(s)	415
NsiI	ATGCAT	2 cut(s)	679, 1534
NspI	RCATGY	1 cut(s)	1625
PagI	TCATGA	2 cut(s)	1305, 1735
PcsI	WCGNNNNNNNCGW	1 cut(s)	371
PctI	GAATGC	1 cut(s)	268
PdiI	GCCGGC	1 cut(s)	324
PfeI	GAWTC	3 cut(s)	62, 385, 893
PflMI	CCANNNNNTGG	1 cut(s)	838
PkrI	GCNGC	8 cut(s)	303, 315, 345, 354, 357, 1070, 1228, 1576
PleI	GAGTC	2 cut(s)	216, 1102
PpsI	GAGTC	2 cut(s)	216, 1102
PshBI	ATTAAT	1 cut(s)	1292
Psp124BI	GAGCTC	4 cut(s)	104, 474, 540, 735
Psp6I	CCWGG	2 cut(s)	831, 1247
PspGI	CCWGG	2 cut(s)	831, 1247
PspPI	GGNCC	4 cut(s)	544, 841, 1606, 1706
PstNI	CAGNNNCTG	1 cut(s)	1022
PsuI	RGATCY	3 cut(s)	79, 251, 850
PvuII	CAGCTG	2 cut(s)	1226, 1574
RsaI	GTAC	2 cut(s)	1015, 1570
RsaNI	GTAC	2 cut(s)	1014, 1569
RseI	CAYNNNNRTG	2 cut(s)	693, 707
SacI	GAGCTC	4 cut(s)	104, 474, 540, 735
SalI	GTCGAC	1 cut(s)	277
SaqAI	TTAA	9 cut(s)	806, 855, 954, 1238, 1254, 1272, 1292, 1349, 1527
SatI	GCNGC	8 cut(s)	302, 314, 344, 353, 356, 1069, 1227, 1575
Sau3AI	GATC	5 cut(s)	79, 165, 251, 850, 1126
Sau96I	GGNCC	4 cut(s)	544, 841, 1606, 1706
SchI	GAGTC	2 cut(s)	217, 1103
ScrFI	CCNGG	4 cut(s)	646, 833, 1249, 1811
SduI	GDGCHC	6 cut(s)	104, 474, 540, 735, 1087, 1357
SfaNI	GCATC	4 cut(s)	664, 769, 1474, 1529
SfcI	CTRYAG	3 cut(s)	199, 909, 1164
SgrAI	CRCCGGYG	1 cut(s)	322
SinI	GGWCC	2 cut(s)	841, 1606
SmiMI	CAYNNNNRTG	2 cut(s)	693, 707
SmlI	CTYRAG	3 cut(s)	539, 854, 1595
SmoI	CTYRAG	3 cut(s)	539, 854, 1595
Sse9I	AATT	8 cut(s)	94, 594, 865, 1258, 1275, 1503, 1562, 1787
SsiI	CCGC	8 cut(s)	53, 301, 311, 314, 352, 355, 1336, 1727
SspI	AATATT	2 cut(s)	804, 1296
SspMI	CTAG	3 cut(s)	123, 659, 1517
SstI	GAGCTC	4 cut(s)	104, 474, 540, 735
StyD4I	CCNGG	4 cut(s)	644, 831, 1247, 1809
StyI	CCWWGG	2 cut(s)	1148, 1774
TaaI	ACNGT	8 cut(s)	163, 203, 367, 717, 790, 900, 1270, 1375
TaqI	TCGA	8 cut(s)	98, 114, 150, 233, 278, 847, 881, 1087
TasI	AATT	8 cut(s)	94, 594, 865, 1258, 1275, 1503, 1562, 1787
TatI	WGTACW	1 cut(s)	1568
TauI	GCSGC	4 cut(s)	304, 316, 355, 358
TfiI	GAWTC	3 cut(s)	62, 385, 893
Tru1I	TTAA	9 cut(s)	806, 855, 954, 1238, 1254, 1272, 1292, 1349, 1527
Tru9I	TTAA	9 cut(s)	806, 855, 954, 1238, 1254, 1272, 1292, 1349, 1527
TscAI	CASTG	1 cut(s)	1273
TseFI	GTSAC	1 cut(s)	415
TseI	GCWGC	4 cut(s)	343, 1068, 1226, 1574
Tsp45I	GTSAC	1 cut(s)	415
TspDTI	ATGAA	9 cut(s)	903, 960, 1155, 1322, 1484, 1505, 1653, 1712, 1724
TspGWI	ACGGA	3 cut(s)	153, 183, 1225
TspRI	CASTG	1 cut(s)	1273
Van91I	CCANNNNNTGG	1 cut(s)	838
Vha464I	CTTAAG	1 cut(s)	854
VpaK11BI	GGWCC	2 cut(s)	841, 1606
VspI	ATTAAT	1 cut(s)	1292
XapI	RAATTY	3 cut(s)	865, 1275, 1562
XceI	RCATGY	1 cut(s)	1625
XmiI	GTMKAC	3 cut(s)	278, 506, 699
XspI	CTAG	3 cut(s)	123, 659, 1517
Zsp2I	ATGCAT	2 cut(s)	679, 1534

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.