Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0003974

Physical Location & Seq

Genomic Coordinates Forward (+)

14447131 .. 14451311

Gene Structure 4181 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1168300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGGTCTCTGCACCTCCAAACCCTCCCCAAACTCTCGTACTTACTCGCCGCAATCCGGTTCCCCAATAACCAAGGAGAGCTCCGTTCCGCTGCCGAACGCCGCCGGAAATGGGGAAGACCCTAGAGGTGAGAAGGCTGAGGAGGAGAACGTCAAGAAGTCTCCGTTTTTCCCGTTCTATAGCCCCAGCCCGGCGCACTACTTCTTCTCCAAGAAGTCTCCGGCGAGATCTCCGGCGAATGTGAGCTCGAACTCGACGCCGAAGCGGTTCTTCAAGCGGCCGTTCCCGCCGCCGTCCCCGGCGAAGCATATAAGGGCGGTTTTGGCGAGGAGGCACGGGTCTGTGAAGCCGAACCAGGCTGCGATACCGGAGGGCGGCGAGGTGGAGGGCCCCACTGGCTTGGATAAGAGCTTCGGGTTTTCCAAGCATATTGGGAACAAGTATGAGATGGGAGAAGAGGTTGGGCGTGGGCATTTTGGGTACACTTGCAAAGCTACGTTCAAGAAGGGTGAGCTCAAGGGCCAGCAGGCCGCCGTCAAAGTCATCCCCAAAGCCAAGATGACTACTGCCATTGCAATTGAGGATGTGAGAAGGGAAGTGAAGATATTGAGAGCTTTAAGTGGACATGACAATCTAGTGAAATTTTATGATGCGTATGAAGACCAGGAAAAGGTCTACATTGTAATGGAATTATGTGAAGGAGGGGAGCTCTTGGATAGGATACTTGCCAGGGGCGGGAAATACACAGAAGATGATGCAAGGACTGTTATGACACAGATATTAAATGTGGTTGCGTTTTGCCACCTCCAAGGCGTGGTGCATCGGGATCTTAAACCTGAGAATTTTCTGTTTACGTCAAAGGATGAAGATTCACAGTTGAAGGCTATAGACTTTGGATTGTCAGATTTTGTCAAACCAGATGAGAGGCTTAATGATATTGTTGGTAGTGCGTACTATGTAGCCCCCGAAGTTCTACATAGGTCTTATGCTACAGAGGCCGATGTCTGGAGTGTAGGCGTGATTGCATACATTCTTTTGTGTGGCAGCCGTCCATTTTGGGCTCGAACTGAGTCTGGCATTTTTCGGGTTGTGCTAAAAGCTGATCCAAGTTTTGACGAACCACCTTGGCCATCTCTGTCCACAGAAGCAAGAGATTTTGTCAAGCGACTATTGAATAAAGACCCACGGAAAAGAATGACTGCTGCTCAAGCCCTCTGTCATCCATGGCTTAAAAATTCTAATGATATTAAAGTGCCTCTGGATATATTAATTTTCAAACTCATGAAGGTCTATATGCGTTCATCACCTCTCCGAAAAGCTGCTTTAAGGGCTCTTTCCAAGACATTGACTGTGGACGAGCTTTCTTATTTGAAGGAGCAGTTTGCGTTGTTGGAACCTAACAAAAATGGCACAATAAGCTTAGAAAATATTAAAACGGCATTGATGAAAAATGCAACTGATGCAATGAAGGAGGCGCGAATTGCTGATTTTCTAGCATCGCTTAATGCATTGCAATACAGAAGGATGGATTTTGAGGAATTTTGTACAGCTGCACTGAGTGTGCACCAACTTGAGGCTGTTGATCAATGGGAGCAACATGCTCGTTATGCCTATGAAATTTTTGAGAAGGATGGCAACAGGGCTATTATGATTGAGGAACTGGCTTCGGAACTTGGCCTCAGCCCTTCCGTCCCAGTTCATGCCGTTCTTCATGATTGGATTAGGCACACTGATGGAAAGCTAAGTTTCCTTGGATTTGTCAAATTGTTGCATGGAGTATCTAGCCGGGCTGTGCCAAAAGCTCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

603

Amino Acids

67.27

Weight (kDa)

8.9

Isoelectric Point (pI)

51.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	148 - 410	7.8e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	149 - 403	1.4e-34	Protein tyrosine and serine/threonine kinase
Kdo	PF06293	222 - 299	8.8e-06	Lipopolysaccharide kinase (Kdo/WaaP) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003974)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50530 AT3G50530
fragaria_vesca	FvH4_1g15620 FvH4_1g15620
malus_domestica	MD02G1168300.v1.1 MD15G1280600.v1.1
prunus_persica	Prupe.7G136700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0104821 RchiOBHm_Chr2g0104961
rosa_laevigata	RLG00000017360 RLG00000017361 RLG00000017379
rosa_multiflora	Rmu_co8294349.1_g000001 Rmu_sc0001247.1_g000003 Rmu_sc0002645.1_g000007
rosa_roxburghii	Rroxscaffold_2G00138620 Rroxscaffold_2G00138750 Rroxscaffold_2G00138760
rosa_rugosa	Rorug02G0123300 Rorug02G0124100
rosa_samantha	Rh2AG173300 Rh2AG173400 Rh2AG174900 Rh2BG181000 Rh2BG182700 Rh2BG182800 Rh2CG178300 Rh2CG179400 Rh2DG179500 Rh2DG179600 Rh2DG181300
rosa_wichuraiana	Rw2G013650 Rw2G013750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	814
AccI	GTMKAC	1 cut(s)	675
AccII	CGCG	1 cut(s)	1477
AclWI	GGATC	2 cut(s)	834, 1097
AcoI	YGGCCR	2 cut(s)	278, 1127
AcsI	RAATTY	5 cut(s)	641, 841, 1234, 1538, 1617
AcyI	GRCGYC	1 cut(s)	257
AdeI	CACNNNGTG	1 cut(s)	1559
AfaI	GTAC	4 cut(s)	40, 482, 953, 1546
AfiI	CCNNNNNNNGG	9 cut(s)	56, 111, 190, 374, 670, 735, 814, 1005, 1573
AgsI	TTSAA	6 cut(s)	274, 502, 880, 1174, 1276, 1372
AjnI	CCWGG	3 cut(s)	354, 663, 728
Alw21I	GWGCWC	5 cut(s)	83, 248, 516, 711, 1566
Alw26I	GTCTC	3 cut(s)	11, 165, 222
Alw44I	GTGCAC	1 cut(s)	1562
AlwI	GGATC	2 cut(s)	834, 1097
AoxI	GGCC	7 cut(s)	278, 388, 520, 528, 996, 1127, 1675
ApaI	GGGCCC	1 cut(s)	392
ApaLI	GTGCAC	1 cut(s)	1562
ApeKI	GCWGC	6 cut(s)	91, 359, 1044, 1202, 1319, 1550
ApoI	RAATTY	5 cut(s)	641, 841, 1234, 1538, 1617
AseI	ATTAAT	1 cut(s)	1268
Asp700I	GAANNNNTTC	1 cut(s)	266
AspLEI	GCGC	2 cut(s)	196, 1477
AspS9I	GGNCC	3 cut(s)	388, 389, 520
AsuC2I	CCSGG	3 cut(s)	191, 299, 1787
AsuHPI	GGTGA	3 cut(s)	140, 521, 1296
BaeGI	GKGCMC	2 cut(s)	392, 1566
BalI	TGGCCA	1 cut(s)	1129
BanII	GRGCYC	7 cut(s)	83, 248, 392, 516, 711, 1063, 1333
BbsI	GAAGAC	2 cut(s)	123, 666
Bbv12I	GWGCWC	5 cut(s)	83, 248, 516, 711, 1566
BbvCI	CCTCAGC	2 cut(s)	138, 1679
BbvI	GCAGC	6 cut(s)	78, 346, 1056, 1189, 1306, 1537
BccI	CCATC	5 cut(s)	442, 1138, 1519, 1625, 1727
BceAI	ACGGC	6 cut(s)	265, 277, 518, 1032, 1452, 1688
BcgI	CGANNNNNNTGC	2 cut(s)	1583, 1617
BciT130I	CCWGG	3 cut(s)	356, 665, 730
BciVI	GTATCC	1 cut(s)	714
BclI	TGATCA	1 cut(s)	1582
BcnI	CCSGG	3 cut(s)	191, 299, 1787
BcoDI	GTCTC	3 cut(s)	11, 165, 222
BfaI	CTAG	4 cut(s)	123, 635, 1493, 1782
BfmI	CTRYAG	3 cut(s)	178, 885, 990
BfuI	GTATCC	1 cut(s)	714
BglI	GCCNNNNNGGC	1 cut(s)	396
BglII	AGATCT	1 cut(s)	227
Bme1390I	CCNGG	6 cut(s)	191, 299, 356, 665, 730, 1787
BmgT120I	GGNCC	3 cut(s)	388, 389, 520
BmiI	GGNNCC	4 cut(s)	61, 390, 391, 1395
BmrFI	CCNGG	6 cut(s)	191, 299, 356, 665, 730, 1787
BmrI	ACTGGG	1 cut(s)	1688
BmsI	GCATC	5 cut(s)	640, 745, 829, 1450, 1505
BmuI	ACTGGG	1 cut(s)	1688
BpiI	GAAGAC	2 cut(s)	123, 666
BplI	GAGNNNNNCTC	2 cut(s)	693, 725
BpmI	CTGGAG	1 cut(s)	1027
Bpu10I	CCTNAGC	2 cut(s)	138, 1679
BpuEI	CTTGAG	3 cut(s)	500, 1191, 1592
BpuMI	CCSGG	3 cut(s)	191, 299, 1787
BsaHI	GRCGYC	1 cut(s)	257
BsaI	GGTCTC	1 cut(s)	11
BsaJI	CCNNGG	8 cut(s)	72, 297, 729, 808, 1124, 1184, 1223, 1750
BsaWI	WCCGGW	2 cut(s)	56, 367
BsaXI	ACNNNNNCTCC	4 cut(s)	191, 221, 444, 474
Bsc4I	CCNNNNNNNGG	9 cut(s)	56, 111, 190, 374, 670, 735, 814, 1005, 1573
Bse1I	ACTGG	3 cut(s)	400, 1665, 1694
Bse3DI	GCAATG	3 cut(s)	570, 1470, 1508
BseBI	CCWGG	3 cut(s)	356, 665, 730
BseDI	CCNNGG	8 cut(s)	72, 297, 729, 808, 1124, 1184, 1223, 1750
BseGI	GGATG	6 cut(s)	543, 589, 868, 1219, 1530, 1636
BseLI	CCNNNNNNNGG	9 cut(s)	56, 111, 190, 374, 670, 735, 814, 1005, 1573
BseMI	GCAATG	3 cut(s)	570, 1470, 1508
BseMII	CTCAG	5 cut(s)	129, 828, 1059, 1547, 1693
BseNI	ACTGG	3 cut(s)	400, 1665, 1694
BseRI	GAGGAG	3 cut(s)	155, 158, 343
BseSI	GKGCMC	2 cut(s)	392, 1566
BseX3I	CGGCCG	1 cut(s)	278
BseXI	GCAGC	6 cut(s)	78, 346, 1056, 1189, 1306, 1537
BseYI	CCCAGC	1 cut(s)	185
BsgI	GTGCAG	1 cut(s)	1536
Bsh1236I	CGCG	1 cut(s)	1477
Bsh1285I	CGRYCG	1 cut(s)	281
BshFI	GGCC	7 cut(s)	280, 390, 522, 530, 998, 1129, 1677
BsiEI	CGRYCG	1 cut(s)	281
BsiHKAI	GWGCWC	5 cut(s)	83, 248, 516, 711, 1566
BsiSI	CCGG	8 cut(s)	57, 105, 191, 221, 233, 299, 368, 1786
BslFI	GGGAC	2 cut(s)	280, 1676
BslI	CCNNNNNNNGG	9 cut(s)	56, 111, 190, 374, 670, 735, 814, 1005, 1573
BsmAI	GTCTC	3 cut(s)	11, 165, 222
BsmFI	GGGAC	2 cut(s)	280, 1676
BsnI	GGCC	7 cut(s)	280, 390, 522, 530, 998, 1129, 1677
Bso31I	GGTCTC	1 cut(s)	11
Bsp120I	GGGCCC	1 cut(s)	388
Bsp1286I	GDGCHC	8 cut(s)	83, 248, 392, 516, 711, 1063, 1333, 1566
Bsp1407I	TGTACA	1 cut(s)	1544
Bsp143I	GATC	4 cut(s)	227, 826, 1102, 1582
Bsp19I	CCATGG	1 cut(s)	1223
BspANI	GGCC	7 cut(s)	280, 390, 522, 530, 998, 1129, 1677
BspCNI	CTCAG	5 cut(s)	130, 829, 1060, 1548, 1692
BspFNI	CGCG	1 cut(s)	1477
BspHI	TCATGA	2 cut(s)	1281, 1711
BspLI	GGNNCC	4 cut(s)	61, 390, 391, 1395
BspPI	GGATC	2 cut(s)	834, 1097
BspTNI	GGTCTC	1 cut(s)	11
BsrDI	GCAATG	3 cut(s)	570, 1470, 1508
BsrGI	TGTACA	1 cut(s)	1544
BsrI	ACTGG	3 cut(s)	400, 1665, 1694
BssECI	CCNNGG	8 cut(s)	72, 297, 729, 808, 1124, 1184, 1223, 1750
BssMI	GATC	4 cut(s)	227, 826, 1102, 1582
BssNI	GRCGYC	1 cut(s)	257
BssT1I	CCWWGG	5 cut(s)	72, 808, 1124, 1223, 1750
Bst2UI	CCWGG	3 cut(s)	356, 665, 730
Bst4CI	ACNGT	3 cut(s)	766, 876, 1351
Bst6I	CTCTTC	1 cut(s)	450
BstACI	GRCGYC	1 cut(s)	257
BstAPI	GCANNNNNTGC	1 cut(s)	1460
BstAUI	TGTACA	1 cut(s)	1544
BstC8I	GCNNGC	2 cut(s)	524, 528
BstDEI	CTNAG	7 cut(s)	138, 837, 1068, 1420, 1556, 1679, 1742
BstDSI	CCRYGG	2 cut(s)	1184, 1223
BstF5I	GGATG	6 cut(s)	543, 589, 868, 1219, 1530, 1636
BstFNI	CGCG	1 cut(s)	1477
BstHHI	GCGC	2 cut(s)	196, 1477
BstKTI	GATC	4 cut(s)	230, 829, 1105, 1585
BstMAI	GTCTC	3 cut(s)	11, 165, 222
BstMBI	GATC	4 cut(s)	227, 826, 1102, 1582
BstMCI	CGRYCG	1 cut(s)	281
BstNI	CCWGG	3 cut(s)	356, 665, 730
BstNSI	RCATGY	1 cut(s)	1601
BstSCI	CCNGG	6 cut(s)	189, 297, 354, 663, 728, 1785
BstSFI	CTRYAG	3 cut(s)	178, 885, 990
BstSLI	GKGCMC	2 cut(s)	392, 1566
BstUI	CGCG	1 cut(s)	1477
BstV1I	GCAGC	6 cut(s)	78, 346, 1056, 1189, 1306, 1537
BstV2I	GAAGAC	2 cut(s)	123, 666
BstX2I	RGATCY	2 cut(s)	227, 826
BstXI	CCANNNNNNTGG	1 cut(s)	400
BstYI	RGATCY	2 cut(s)	227, 826
BstZI	CGGCCG	1 cut(s)	278
BsuI	GTATCC	1 cut(s)	714
BsuRI	GGCC	7 cut(s)	280, 390, 522, 530, 998, 1129, 1677
BtgI	CCRYGG	2 cut(s)	1184, 1223
BtgZI	GCGATG	1 cut(s)	1482
BtsCI	GGATG	6 cut(s)	543, 589, 868, 1219, 1530, 1636
BtsIMutI	CAGTG	3 cut(s)	393, 1553, 1728
Cac8I	GCNNGC	2 cut(s)	524, 528
CciI	TCATGA	2 cut(s)	1281, 1711
CfoI	GCGC	2 cut(s)	196, 1477
Cfr13I	GGNCC	3 cut(s)	388, 389, 520
CseI	GACGC	1 cut(s)	265
Csp6I	GTAC	4 cut(s)	39, 481, 952, 1545
CviAII	CATG	7 cut(s)	626, 1224, 1282, 1598, 1700, 1712, 1772
CviQI	GTAC	4 cut(s)	39, 481, 952, 1545
DdeI	CTNAG	7 cut(s)	138, 837, 1068, 1420, 1556, 1679, 1742
DpnI	GATC	4 cut(s)	229, 828, 1104, 1584
DpnII	GATC	4 cut(s)	227, 826, 1102, 1582
DraIII	CACNNNGTG	1 cut(s)	1559
EaeI	YGGCCR	2 cut(s)	278, 1127
EagI	CGGCCG	1 cut(s)	278
Eam1104I	CTCTTC	1 cut(s)	450
EarI	CTCTTC	1 cut(s)	450
Ecl136II	GAGCTC	4 cut(s)	81, 246, 514, 709
EclXI	CGGCCG	1 cut(s)	278
Eco130I	CCWWGG	5 cut(s)	72, 808, 1124, 1223, 1750
Eco24I	GRGCYC	7 cut(s)	83, 248, 392, 516, 711, 1063, 1333
Eco31I	GGTCTC	1 cut(s)	11
Eco52I	CGGCCG	1 cut(s)	278
Eco53kI	GAGCTC	4 cut(s)	81, 246, 514, 709
EcoICRI	GAGCTC	4 cut(s)	81, 246, 514, 709
EcoO109I	RGGNCCY	2 cut(s)	388, 389
EcoRII	CCWGG	3 cut(s)	354, 663, 728
EcoT14I	CCWWGG	5 cut(s)	72, 808, 1124, 1223, 1750
EcoT22I	ATGCAT	1 cut(s)	1510
EcoT38I	GRGCYC	7 cut(s)	83, 248, 392, 516, 711, 1063, 1333
ErhI	CCWWGG	5 cut(s)	72, 808, 1124, 1223, 1750
FaeI	CATG	7 cut(s)	629, 1227, 1285, 1601, 1703, 1715, 1775
FalI	AAGNNNNNCTT	2 cut(s)	254, 286
FaqI	GGGAC	2 cut(s)	280, 1676
FatI	CATG	7 cut(s)	625, 1223, 1281, 1597, 1699, 1711, 1771
FauI	CCCGC	2 cut(s)	294, 728
FbaI	TGATCA	1 cut(s)	1582
FblI	GTMKAC	1 cut(s)	675
FokI	GGATG	6 cut(s)	530, 596, 875, 1206, 1537, 1643
FriOI	GRGCYC	7 cut(s)	83, 248, 392, 516, 711, 1063, 1333
FspBI	CTAG	4 cut(s)	123, 635, 1493, 1782
GlaI	GCGC	2 cut(s)	195, 1476
GsaI	CCCAGC	1 cut(s)	189
GsuI	CTGGAG	1 cut(s)	1027
HaeIII	GGCC	7 cut(s)	280, 390, 522, 530, 998, 1129, 1677
HapII	CCGG	8 cut(s)	57, 105, 191, 221, 233, 299, 368, 1786
HgaI	GACGC	1 cut(s)	265
HhaI	GCGC	2 cut(s)	196, 1477
Hin1I	GRCGYC	1 cut(s)	257
Hin1II	CATG	7 cut(s)	629, 1227, 1285, 1601, 1703, 1715, 1775
Hin6I	GCGC	2 cut(s)	194, 1475
HinP1I	GCGC	2 cut(s)	194, 1475
HindIII	AAGCTT	1 cut(s)	1417
HinfI	GANTC	2 cut(s)	869, 1070
HpaII	CCGG	8 cut(s)	57, 105, 191, 221, 233, 299, 368, 1786
HphI	GGTGA	3 cut(s)	140, 521, 1296
Hpy166II	GTNNAC	7 cut(s)	483, 623, 676, 852, 1140, 1354, 1564
Hpy188I	TCNGA	3 cut(s)	904, 1313, 1669
Hpy188III	TCNNGA	7 cut(s)	154, 502, 824, 1006, 1259, 1282, 1712
Hpy8I	GTNNAC	7 cut(s)	483, 623, 676, 852, 1140, 1354, 1564
Hpy99I	CGWCG	1 cut(s)	259
HpyCH4III	ACNGT	3 cut(s)	766, 876, 1351
HpyCH4IV	ACGT	3 cut(s)	150, 497, 854
HpyF3I	CTNAG	7 cut(s)	138, 837, 1068, 1420, 1556, 1679, 1742
HpySE526I	ACGT	3 cut(s)	150, 497, 854
Hsp92I	GRCGYC	1 cut(s)	257
Hsp92II	CATG	7 cut(s)	629, 1227, 1285, 1601, 1703, 1715, 1775
HspAI	GCGC	2 cut(s)	194, 1475
Ksp22I	TGATCA	1 cut(s)	1582
Kzo9I	GATC	4 cut(s)	227, 826, 1102, 1582
LmnI	GCTCC	4 cut(s)	86, 706, 1375, 1591
Lsp1109I	GCAGC	6 cut(s)	78, 346, 1056, 1189, 1306, 1537
LweI	GCATC	5 cut(s)	640, 745, 829, 1450, 1505
MaeI	CTAG	4 cut(s)	123, 635, 1493, 1782
MaeII	ACGT	3 cut(s)	150, 497, 854
MalI	GATC	4 cut(s)	229, 828, 1104, 1584
MboI	GATC	4 cut(s)	227, 826, 1102, 1582
MboII	GAAGA	9 cut(s)	128, 196, 262, 467, 613, 671, 761, 878, 1700
MfeI	CAATTG	1 cut(s)	576
MflI	RGATCY	2 cut(s)	227, 826
MhlI	GDGCHC	8 cut(s)	83, 248, 392, 516, 711, 1063, 1333, 1566
MlsI	TGGCCA	1 cut(s)	1129
MluNI	TGGCCA	1 cut(s)	1129
MlyI	GAGTC	1 cut(s)	1079
MmeI	TCCRAC	1 cut(s)	1371
Mox20I	TGGCCA	1 cut(s)	1129
Mph1103I	ATGCAT	1 cut(s)	1510
MroXI	GAANNNNTTC	1 cut(s)	266
MscI	TGGCCA	1 cut(s)	1129
MslI	CAYNNNNRTG	2 cut(s)	683, 1731
Msp20I	TGGCCA	1 cut(s)	1129
MspA1I	CMGCKG	2 cut(s)	91, 1550
MspI	CCGG	8 cut(s)	57, 105, 191, 221, 233, 299, 368, 1786
MspR9I	CCNGG	6 cut(s)	191, 299, 356, 665, 730, 1787
MunI	CAATTG	1 cut(s)	576
MvaI	CCWGG	3 cut(s)	356, 665, 730
MvnI	CGCG	1 cut(s)	1477
NciI	CCSGG	3 cut(s)	191, 299, 1787
NcoI	CCATGG	1 cut(s)	1223
NdeII	GATC	4 cut(s)	227, 826, 1102, 1582
NlaIII	CATG	7 cut(s)	629, 1227, 1285, 1601, 1703, 1715, 1775
NlaIV	GGNNCC	4 cut(s)	61, 390, 391, 1395
NsiI	ATGCAT	1 cut(s)	1510
NspI	RCATGY	1 cut(s)	1601
PagI	TCATGA	2 cut(s)	1281, 1711
PdmI	GAANNNNTTC	1 cut(s)	266
PfeI	GAWTC	1 cut(s)	869
PflMI	CCANNNNNTGG	1 cut(s)	814
PleI	GAGTC	1 cut(s)	1078
PpsI	GAGTC	1 cut(s)	1078
PshBI	ATTAAT	1 cut(s)	1268
Psp124BI	GAGCTC	4 cut(s)	83, 248, 516, 711
Psp6I	CCWGG	3 cut(s)	354, 663, 728
PspFI	CCCAGC	1 cut(s)	185
PspGI	CCWGG	3 cut(s)	354, 663, 728
PspN4I	GGNNCC	4 cut(s)	61, 390, 391, 1395
PspOMI	GGGCCC	1 cut(s)	388
PspPI	GGNCC	3 cut(s)	388, 389, 520
PsuI	RGATCY	2 cut(s)	227, 826
PvuII	CAGCTG	1 cut(s)	1550
RsaI	GTAC	4 cut(s)	40, 482, 953, 1546
RsaNI	GTAC	4 cut(s)	39, 481, 952, 1545
RseI	CAYNNNNRTG	2 cut(s)	683, 1731
SacI	GAGCTC	4 cut(s)	83, 248, 516, 711
Sau3AI	GATC	4 cut(s)	227, 826, 1102, 1582
Sau96I	GGNCC	3 cut(s)	388, 389, 520
SchI	GAGTC	1 cut(s)	1079
ScrFI	CCNGG	6 cut(s)	191, 299, 356, 665, 730, 1787
SduI	GDGCHC	8 cut(s)	83, 248, 392, 516, 711, 1063, 1333, 1566
SfaNI	GCATC	5 cut(s)	640, 745, 829, 1450, 1505
SfcI	CTRYAG	3 cut(s)	178, 885, 990
SmiMI	CAYNNNNRTG	2 cut(s)	683, 1731
SmlI	CTYRAG	3 cut(s)	515, 1206, 1571
SmoI	CTYRAG	3 cut(s)	515, 1206, 1571
SspI	AATATT	1 cut(s)	1429
SspMI	CTAG	4 cut(s)	123, 635, 1493, 1782
SstI	GAGCTC	4 cut(s)	83, 248, 516, 711
StyD4I	CCNGG	6 cut(s)	189, 297, 354, 663, 728, 1785
StyI	CCWWGG	5 cut(s)	72, 808, 1124, 1223, 1750
TaaI	ACNGT	3 cut(s)	766, 876, 1351
TaiI	ACGT	3 cut(s)	153, 500, 857
TaqI	TCGA	3 cut(s)	248, 254, 1063
TatI	WGTACW	1 cut(s)	1544
TauI	GCSGC	6 cut(s)	52, 104, 280, 292, 378, 533
TfiI	GAWTC	1 cut(s)	869
TscAI	CASTG	3 cut(s)	400, 1560, 1735
TseI	GCWGC	6 cut(s)	91, 359, 1044, 1202, 1319, 1550
TspDTI	ATGAA	9 cut(s)	672, 879, 1290, 1298, 1460, 1481, 1629, 1688, 1700
TspGWI	ACGGA	4 cut(s)	73, 153, 1201, 1678
TspRI	CASTG	3 cut(s)	400, 1560, 1735
Van91I	CCANNNNNTGG	1 cut(s)	814
VneI	GTGCAC	1 cut(s)	1562
VspI	ATTAAT	1 cut(s)	1268
XapI	RAATTY	5 cut(s)	641, 841, 1234, 1538, 1617
XceI	RCATGY	1 cut(s)	1601
XmiI	GTMKAC	1 cut(s)	675
XmnI	GAANNNNTTC	1 cut(s)	266
XspI	CTAG	4 cut(s)	123, 635, 1493, 1782
Zsp2I	ATGCAT	1 cut(s)	1510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.