Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0003974

Physical Location & Seq

Genomic Coordinates Forward (+)

15860875 .. 15864335

Gene Structure 3461 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017379

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGGGTCTCTGCACCTCCAAACCCTCGTTCCCCAACTCCATCACTTCGTCTCCGCAGTCCGATTCTCAGGTCGGGAAAGATCCGGTGAACGTCAATTCGAGCTCCGGCGATGTCGAAAACCCTAGAAATGAGCAGAACGGAGAAAAGGTCGAGGAGGAGACTGTGATCGCCGTCAAGAAGTCGCCGTTTTTTCCGTTCTACAGTCCGAGTCCGGCACACTACTTCTTCTCATCGAAGAAGTCTCCGGCGAGATCTCCGGCGAATGCCAGCGCGAAGTCGACGCCGAGCCGGTTCTTCAATCGGCCGTTCCCGCCGCCGTCTCCGGCGAAGCACATAAGGGCGCTGCTGGCGCGGCGGCAAGGGACGGTGAAGCCGAACGAGGCGATTCCAGAGGGGAGTGAGGTTGAGGGAGGTGTGACTGGCCTTGATAAGAGCTTTGGGTTCTCTAAGCATTTGAGTAACAAGTATGAGCTCGGAGAAGAGGTTGGCCGAGGGCATTTTGGGTATACTTGCAAAGCTACCTTCAAGAAGGGAGAGCTCAAGGGCCAGCAGGTTGCTGTCAAAGTCATCCCCAAAGTCAAGATGACTACTGCAATTGCCATTGAGGATGTGAGAAGGGAAGTCAAGATATTAAAAGCTTTGACCGGGCATAGCAATCTAGTACAGTTTTATGATGCATACGAAGACCATGATAATGTCTACATAGTTATGGAACTGTGTGAAGGAGGGGAGCTCTTAGATAGGATACTTGCAAGGGGTGGGAAATATACGGAGGAAGATGCAAGGACCGTGATGATACAAATATTAAATGTTGTCGCGTTTTGCCACCTCCAGGGCGTGGTCCATCGAGATCTTAAGCCAGAGTTAAAGGCTATAGACTTTGGCCTTTCAGATTTTGTGAAACCAGATGAAAGGCTGAACGACATTGTTGGTAGTGCATACTATGTTGCCCCTGAAGTGTTACATAGGGCTTATGGTACAGAGGCTGATGTCTGGAGCGTAGGTGTGATTGCATACATTCTATTGTGTGGCAGCCGTCCATTTTGGGCTCGAACTGAGTCTGGCATTTTTCGGGCAGTTCTAAAAGCTGATCCAAGTTTCGATGAAACACCTTGGCCAACTCTGTCGACAGAGGCAAAAGATTTTGTCAAGCGCCTATTGAATAAAGACCCACGGAAAAGAATGACAGCTGCACAAGCGTTAAGTCATCCCTGGCTTAAAAATTATAGCACTGTTAAAGTTCCTCTGGACATATTAATATTCAAGCTCATGAAGGTTTATATGCGCTCATCACCCCTCCGCAAAACTGCTTTAAGGGCTCTTTCCAAGACATTGACTGTTGATGAGCTTTGCTACTTGAAGGAGCAGTTTGCACTTTTAGAACCAAACAAAAATGGCACAATAAGCTTAGAAAACATCAAAACGGCCTTGATGAAAAATGCAACTGATGCAATGAAGGAGGCACGAATTGCTGATTTTCTAGCATCGCTTAACGCATTGCAATACAGAAGGATGGATTTTGAGGAATTTTGTACAGCTACACTAAGTGTCCACCAACTTGAGGCTCTGGACCGTTGGGAACAACATGCTCGTTGTGCATATGAACTTTTTGATAGGGAAGGCAACAGGGCTATTGTCATTGAGGAACTGGCTTCGGAACTTGGTCTTGGCCCTTCTGTCCCTGTTCATGCGGTTCTTCATGATTGGATTAGGCACACTGACGGGAAGCTGAGTTTCCTTGGATTTGTGAAATTGTTGCATGGTGTATCCAGCCGGGTTGTTGCAAAAGCTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

599

Amino Acids

66.71

Weight (kDa)

8.74

Isoelectric Point (pI)

45.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	156 - 406	5.9e-66	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	157 - 399	3.8e-29	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003974)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50530 AT3G50530
fragaria_vesca	FvH4_1g15620 FvH4_1g15620
malus_domestica	MD02G1168300.v1.1 MD15G1280600.v1.1
prunus_persica	Prupe.7G136700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0104821 RchiOBHm_Chr2g0104961
rosa_laevigata	RLG00000017360 RLG00000017361 RLG00000017379
rosa_multiflora	Rmu_co8294349.1_g000001 Rmu_sc0001247.1_g000003 Rmu_sc0002645.1_g000007
rosa_roxburghii	Rroxscaffold_2G00138620 Rroxscaffold_2G00138750 Rroxscaffold_2G00138760
rosa_rugosa	Rorug02G0123300 Rorug02G0124100
rosa_samantha	Rh2AG173300 Rh2AG173400 Rh2AG174900 Rh2BG181000 Rh2BG182700 Rh2BG182800 Rh2CG178300 Rh2CG179400 Rh2DG179500 Rh2DG179600 Rh2DG181300
rosa_wichuraiana	Rw2G013650 Rw2G013750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	541
AccB7I	CCANNNNNTGG	1 cut(s)	838
AccI	GTMKAC	4 cut(s)	278, 506, 699, 1127
AccII	CGCG	3 cut(s)	272, 352, 818
AciI	CCGC	7 cut(s)	53, 311, 314, 352, 355, 1300, 1691
AclWI	GGATC	2 cut(s)	74, 1085
AcoI	YGGCCR	3 cut(s)	302, 487, 1115
AcsI	RAATTY	1 cut(s)	1526
AcuI	CTGAAG	1 cut(s)	975
AcyI	GRCGYC	1 cut(s)	281
AdeI	CACNNNGTG	1 cut(s)	1547
AfaI	GTAC	3 cut(s)	663, 979, 1534
AfiI	CCNNNNNNNGG	3 cut(s)	832, 838, 1561
AflII	CTTAAG	1 cut(s)	854
AgsI	TTSAA	5 cut(s)	298, 526, 1162, 1264, 1360
AjnI	CCWGG	2 cut(s)	831, 1211
AjuI	GAANNNNNNNTTGG	4 cut(s)	11, 43, 1650, 1682
Alw21I	GWGCWC	4 cut(s)	104, 474, 540, 735
Alw26I	GTCTC	5 cut(s)	11, 54, 152, 246, 324
AlwI	GGATC	2 cut(s)	74, 1085
AlwNI	CAGNNNCTG	1 cut(s)	986
AoxI	GGCC	8 cut(s)	302, 421, 487, 544, 883, 1115, 1425, 1669
ApeKI	GCWGC	3 cut(s)	343, 1032, 1190
ApoI	RAATTY	1 cut(s)	1526
AseI	ATTAAT	1 cut(s)	1256
AspLEI	GCGC	5 cut(s)	272, 343, 352, 1155, 1287
AspS9I	GGNCC	5 cut(s)	544, 786, 841, 1570, 1670
AsuC2I	CCSGG	2 cut(s)	646, 1775
AsuHPI	GGTGA	3 cut(s)	97, 379, 1284
AvaII	GGWCC	3 cut(s)	786, 841, 1570
BalI	TGGCCA	1 cut(s)	1117
BanII	GRGCYC	6 cut(s)	104, 474, 540, 735, 1051, 1321
BbsI	GAAGAC	1 cut(s)	690
Bbv12I	GWGCWC	4 cut(s)	104, 474, 540, 735
BbvI	GCAGC	3 cut(s)	330, 1044, 1177
BccI	CCATC	3 cut(s)	47, 852, 1507
BceAI	ACGGC	6 cut(s)	155, 169, 289, 301, 1020, 1440
BciT130I	CCWGG	2 cut(s)	833, 1213
BciVI	GTATCC	2 cut(s)	738, 1777
BcnI	CCSGG	2 cut(s)	646, 1775
BcoDI	GTCTC	5 cut(s)	11, 54, 152, 246, 324
BfaI	CTAG	3 cut(s)	123, 659, 1481
BfmI	CTRYAG	2 cut(s)	199, 873
BfoI	RGCGCY	2 cut(s)	344, 1156
BfrI	CTTAAG	1 cut(s)	854
BfuAI	ACCTGC	1 cut(s)	541
BfuI	GTATCC	2 cut(s)	738, 1777
BglII	AGATCT	2 cut(s)	251, 850
BisI	GCNGC	6 cut(s)	314, 344, 353, 356, 1033, 1191
BlsI	GCNGC	6 cut(s)	315, 345, 354, 357, 1034, 1192
Bme1390I	CCNGG	4 cut(s)	646, 833, 1213, 1775
Bme18I	GGWCC	3 cut(s)	786, 841, 1570
BmgT120I	GGNCC	5 cut(s)	544, 786, 841, 1570, 1670
BmrFI	CCNGG	4 cut(s)	646, 833, 1213, 1775
BmsI	GCATC	4 cut(s)	664, 769, 1438, 1493
BpiI	GAAGAC	1 cut(s)	690
BplI	GAGNNNNNCTC	2 cut(s)	717, 749
BpmI	CTGGAG	2 cut(s)	815, 1015
BpuEI	CTTGAG	2 cut(s)	524, 1580
BpuMI	CCSGG	2 cut(s)	646, 1775
BsaHI	GRCGYC	1 cut(s)	281
BsaI	GGTCTC	1 cut(s)	11
BsaJI	CCNNGG	6 cut(s)	490, 832, 1112, 1172, 1211, 1738
BsaWI	WCCGGW	1 cut(s)	82
BsaXI	ACNNNNNCTCC	8 cut(s)	34, 64, 132, 162, 468, 498, 988, 1018
Bsc4I	CCNNNNNNNGG	3 cut(s)	832, 838, 1561
Bse118I	RCCGGY	1 cut(s)	288
Bse1I	ACTGG	2 cut(s)	424, 1653
Bse3DI	GCAATG	2 cut(s)	1458, 1496
BseBI	CCWGG	2 cut(s)	833, 1213
BseDI	CCNNGG	6 cut(s)	490, 832, 1112, 1172, 1211, 1738
BseGI	GGATG	4 cut(s)	567, 613, 1207, 1518
BseLI	CCNNNNNNNGG	3 cut(s)	832, 838, 1561
BseMI	GCAATG	2 cut(s)	1458, 1496
BseMII	CTCAG	3 cut(s)	80, 1047, 1721
BseNI	ACTGG	2 cut(s)	424, 1653
BseRI	GAGGAG	2 cut(s)	167, 170
BseX3I	CGGCCG	1 cut(s)	302
BseXI	GCAGC	3 cut(s)	330, 1044, 1177
BsgI	GTGCAG	1 cut(s)	1176
Bsh1236I	CGCG	3 cut(s)	272, 352, 818
Bsh1285I	CGRYCG	1 cut(s)	305
BshFI	GGCC	8 cut(s)	304, 423, 489, 546, 885, 1117, 1427, 1671
BsiEI	CGRYCG	1 cut(s)	305
BsiHKAI	GWGCWC	4 cut(s)	104, 474, 540, 735
BsiSI	CCGG	9 cut(s)	83, 105, 212, 245, 257, 289, 323, 645, 1774
BslFI	GGGAC	2 cut(s)	376, 1664
BslI	CCNNNNNNNGG	3 cut(s)	832, 838, 1561
BsmAI	GTCTC	5 cut(s)	11, 54, 152, 246, 324
BsmBI	CGTCTC	2 cut(s)	54, 324
BsmFI	GGGAC	2 cut(s)	376, 1664
BsmI	GAATGC	1 cut(s)	268
BsnI	GGCC	8 cut(s)	304, 423, 489, 546, 885, 1117, 1427, 1671
Bso31I	GGTCTC	1 cut(s)	11
Bsp1286I	GDGCHC	6 cut(s)	104, 474, 540, 735, 1051, 1321
Bsp1407I	TGTACA	1 cut(s)	1532
Bsp143I	GATC	5 cut(s)	79, 165, 251, 850, 1090
BspACI	CCGC	7 cut(s)	53, 311, 314, 352, 355, 1300, 1691
BspANI	GGCC	8 cut(s)	304, 423, 489, 546, 885, 1117, 1427, 1671
BspCNI	CTCAG	3 cut(s)	79, 1048, 1722
BspFNI	CGCG	3 cut(s)	272, 352, 818
BspHI	TCATGA	2 cut(s)	1269, 1699
BspMI	ACCTGC	1 cut(s)	541
BspPI	GGATC	2 cut(s)	74, 1085
BspTI	CTTAAG	1 cut(s)	854
BspTNI	GGTCTC	1 cut(s)	11
BsrDI	GCAATG	2 cut(s)	1458, 1496
BsrFI	RCCGGY	1 cut(s)	288
BsrGI	TGTACA	1 cut(s)	1532
BsrI	ACTGG	2 cut(s)	424, 1653
BssAI	RCCGGY	1 cut(s)	288
BssECI	CCNNGG	6 cut(s)	490, 832, 1112, 1172, 1211, 1738
BssMI	GATC	5 cut(s)	79, 165, 251, 850, 1090
BssNAI	GTATAC	1 cut(s)	507
BssNI	GRCGYC	1 cut(s)	281
BssT1I	CCWWGG	2 cut(s)	1112, 1738
Bst1107I	GTATAC	1 cut(s)	507
Bst2UI	CCWGG	2 cut(s)	833, 1213
Bst4CI	ACNGT	9 cut(s)	163, 203, 367, 666, 717, 790, 1234, 1339, 1574
Bst6I	CTCTTC	1 cut(s)	474
BstACI	GRCGYC	1 cut(s)	281
BstAFI	CTTAAG	1 cut(s)	854
BstAPI	GCANNNNNTGC	2 cut(s)	1448, 1469
BstAUI	TGTACA	1 cut(s)	1532
BstC8I	GCNNGC	3 cut(s)	268, 348, 548
BstDEI	CTNAG	7 cut(s)	66, 447, 736, 1056, 1408, 1544, 1730
BstDSI	CCRYGG	1 cut(s)	1172
BstF5I	GGATG	4 cut(s)	567, 613, 1207, 1518
BstFNI	CGCG	3 cut(s)	272, 352, 818
BstH2I	RGCGCY	2 cut(s)	344, 1156
BstHHI	GCGC	5 cut(s)	272, 343, 352, 1155, 1287
BstKTI	GATC	5 cut(s)	82, 168, 254, 853, 1093
BstMAI	GTCTC	5 cut(s)	11, 54, 152, 246, 324
BstMBI	GATC	5 cut(s)	79, 165, 251, 850, 1090
BstMCI	CGRYCG	1 cut(s)	305
BstNI	CCWGG	2 cut(s)	833, 1213
BstNSI	RCATGY	1 cut(s)	1589
BstSCI	CCNGG	4 cut(s)	644, 831, 1211, 1773
BstSFI	CTRYAG	2 cut(s)	199, 873
BstUI	CGCG	3 cut(s)	272, 352, 818
BstV1I	GCAGC	3 cut(s)	330, 1044, 1177
BstV2I	GAAGAC	1 cut(s)	690
BstX2I	RGATCY	3 cut(s)	79, 251, 850
BstYI	RGATCY	3 cut(s)	79, 251, 850
BstZ17I	GTATAC	1 cut(s)	507
BstZI	CGGCCG	1 cut(s)	302
BsuI	GTATCC	2 cut(s)	738, 1777
BsuRI	GGCC	8 cut(s)	304, 423, 489, 546, 885, 1117, 1427, 1671
BtgI	CCRYGG	1 cut(s)	1172
BtgZI	GCGATG	2 cut(s)	123, 1470
BtsCI	GGATG	4 cut(s)	567, 613, 1207, 1518
BtsIMutI	CAGTG	2 cut(s)	1230, 1716
BveI	ACCTGC	1 cut(s)	541
Cac8I	GCNNGC	3 cut(s)	268, 348, 548
CaiI	CAGNNNCTG	1 cut(s)	986
CciI	TCATGA	2 cut(s)	1269, 1699
CfoI	GCGC	5 cut(s)	272, 343, 352, 1155, 1287
Cfr10I	RCCGGY	1 cut(s)	288
Cfr13I	GGNCC	5 cut(s)	544, 786, 841, 1570, 1670
CseI	GACGC	1 cut(s)	289
Csp6I	GTAC	3 cut(s)	662, 978, 1533
CviAII	CATG	6 cut(s)	689, 1270, 1586, 1688, 1700, 1760
CviQI	GTAC	3 cut(s)	662, 978, 1533
DdeI	CTNAG	7 cut(s)	66, 447, 736, 1056, 1408, 1544, 1730
DpnI	GATC	5 cut(s)	81, 167, 253, 852, 1092
DpnII	GATC	5 cut(s)	79, 165, 251, 850, 1090
DraIII	CACNNNGTG	1 cut(s)	1547
EaeI	YGGCCR	3 cut(s)	302, 487, 1115
EagI	CGGCCG	1 cut(s)	302
Eam1104I	CTCTTC	1 cut(s)	474
EarI	CTCTTC	1 cut(s)	474
Ecl136II	GAGCTC	4 cut(s)	102, 472, 538, 733
EclXI	CGGCCG	1 cut(s)	302
Eco130I	CCWWGG	2 cut(s)	1112, 1738
Eco24I	GRGCYC	6 cut(s)	104, 474, 540, 735, 1051, 1321
Eco31I	GGTCTC	1 cut(s)	11
Eco47I	GGWCC	3 cut(s)	786, 841, 1570
Eco52I	CGGCCG	1 cut(s)	302
Eco53kI	GAGCTC	4 cut(s)	102, 472, 538, 733
Eco57I	CTGAAG	1 cut(s)	975
EcoICRI	GAGCTC	4 cut(s)	102, 472, 538, 733
EcoRII	CCWGG	2 cut(s)	831, 1211
EcoT14I	CCWWGG	2 cut(s)	1112, 1738
EcoT22I	ATGCAT	1 cut(s)	679
EcoT38I	GRGCYC	6 cut(s)	104, 474, 540, 735, 1051, 1321
ErhI	CCWWGG	2 cut(s)	1112, 1738
Esp3I	CGTCTC	2 cut(s)	54, 324
FaeI	CATG	6 cut(s)	692, 1273, 1589, 1691, 1703, 1763
FaqI	GGGAC	2 cut(s)	376, 1664
FatI	CATG	6 cut(s)	688, 1269, 1585, 1687, 1699, 1759
FauI	CCCGC	1 cut(s)	318
FauNDI	CATATG	1 cut(s)	1600
FblI	GTMKAC	4 cut(s)	278, 506, 699, 1127
Fnu4HI	GCNGC	6 cut(s)	314, 344, 353, 356, 1033, 1191
FokI	GGATG	4 cut(s)	554, 620, 1194, 1525
FriOI	GRGCYC	6 cut(s)	104, 474, 540, 735, 1051, 1321
Fsp4HI	GCNGC	6 cut(s)	314, 344, 353, 356, 1033, 1191
FspBI	CTAG	3 cut(s)	123, 659, 1481
GlaI	GCGC	5 cut(s)	271, 342, 351, 1154, 1286
GluI	GCNGC	6 cut(s)	314, 344, 353, 356, 1033, 1191
GsuI	CTGGAG	2 cut(s)	815, 1015
HaeII	RGCGCY	2 cut(s)	344, 1156
HaeIII	GGCC	8 cut(s)	304, 423, 489, 546, 885, 1117, 1427, 1671
HapII	CCGG	9 cut(s)	83, 105, 212, 245, 257, 289, 323, 645, 1774
HgaI	GACGC	1 cut(s)	289
HhaI	GCGC	5 cut(s)	272, 343, 352, 1155, 1287
Hin1I	GRCGYC	1 cut(s)	281
Hin1II	CATG	6 cut(s)	692, 1273, 1589, 1691, 1703, 1763
Hin6I	GCGC	5 cut(s)	270, 341, 350, 1153, 1285
HinP1I	GCGC	5 cut(s)	270, 341, 350, 1153, 1285
HincII	GTYRAC	2 cut(s)	279, 1128
HindII	GTYRAC	2 cut(s)	279, 1128
HindIII	AAGCTT	2 cut(s)	636, 1405
HinfI	GANTC	4 cut(s)	62, 208, 385, 1058
HpaII	CCGG	9 cut(s)	83, 105, 212, 245, 257, 289, 323, 645, 1774
HphI	GGTGA	3 cut(s)	97, 379, 1284
Hpy166II	GTNNAC	6 cut(s)	88, 279, 507, 700, 1128, 1552
Hpy188I	TCNGA	5 cut(s)	61, 207, 476, 892, 1657
Hpy8I	GTNNAC	6 cut(s)	88, 279, 507, 700, 1128, 1552
Hpy99I	CGWCG	1 cut(s)	283
HpyCH4III	ACNGT	9 cut(s)	163, 203, 367, 666, 717, 790, 1234, 1339, 1574
HpyCH4IV	ACGT	1 cut(s)	90
HpyF3I	CTNAG	7 cut(s)	66, 447, 736, 1056, 1408, 1544, 1730
HpySE526I	ACGT	1 cut(s)	90
Hsp92I	GRCGYC	1 cut(s)	281
Hsp92II	CATG	6 cut(s)	692, 1273, 1589, 1691, 1703, 1763
HspAI	GCGC	5 cut(s)	270, 341, 350, 1153, 1285
Kzo9I	GATC	5 cut(s)	79, 165, 251, 850, 1090
LmnI	GCTCC	4 cut(s)	107, 730, 996, 1363
Lsp1109I	GCAGC	3 cut(s)	330, 1044, 1177
LweI	GCATC	4 cut(s)	664, 769, 1438, 1493
MaeI	CTAG	3 cut(s)	123, 659, 1481
MaeII	ACGT	1 cut(s)	90
MaeIII	GTNAC	3 cut(s)	415, 458, 960
MalI	GATC	5 cut(s)	81, 167, 253, 852, 1092
MboI	GATC	5 cut(s)	79, 165, 251, 850, 1090
MboII	GAAGA	7 cut(s)	217, 247, 286, 491, 695, 788, 1688
MfeI	CAATTG	1 cut(s)	594
MflI	RGATCY	3 cut(s)	79, 251, 850
MhlI	GDGCHC	6 cut(s)	104, 474, 540, 735, 1051, 1321
MlsI	TGGCCA	1 cut(s)	1117
MluCI	AATT	6 cut(s)	94, 594, 1222, 1467, 1526, 1751
MluNI	TGGCCA	1 cut(s)	1117
MlyI	GAGTC	2 cut(s)	217, 1067
Mox20I	TGGCCA	1 cut(s)	1117
Mph1103I	ATGCAT	1 cut(s)	679
MscI	TGGCCA	1 cut(s)	1117
MslI	CAYNNNNRTG	2 cut(s)	693, 707
Msp20I	TGGCCA	1 cut(s)	1117
MspA1I	CMGCKG	1 cut(s)	1190
MspCI	CTTAAG	1 cut(s)	854
MspI	CCGG	9 cut(s)	83, 105, 212, 245, 257, 289, 323, 645, 1774
MspR9I	CCNGG	4 cut(s)	646, 833, 1213, 1775
MunI	CAATTG	1 cut(s)	594
Mva1269I	GAATGC	1 cut(s)	268
MvaI	CCWGG	2 cut(s)	833, 1213
MvnI	CGCG	3 cut(s)	272, 352, 818
NciI	CCSGG	2 cut(s)	646, 1775
NdeI	CATATG	1 cut(s)	1600
NdeII	GATC	5 cut(s)	79, 165, 251, 850, 1090
NlaIII	CATG	6 cut(s)	692, 1273, 1589, 1691, 1703, 1763
NmeAIII	GCCGAG	2 cut(s)	309, 515
NmuCI	GTSAC	1 cut(s)	415
NsiI	ATGCAT	1 cut(s)	679
NspI	RCATGY	1 cut(s)	1589
PagI	TCATGA	2 cut(s)	1269, 1699
PcsI	WCGNNNNNNNCGW	1 cut(s)	371
PctI	GAATGC	1 cut(s)	268
PfeI	GAWTC	2 cut(s)	62, 385
PflMI	CCANNNNNTGG	1 cut(s)	838
PkrI	GCNGC	6 cut(s)	315, 345, 354, 357, 1034, 1192
PleI	GAGTC	2 cut(s)	216, 1066
PpsI	GAGTC	2 cut(s)	216, 1066
PshBI	ATTAAT	1 cut(s)	1256
Psp124BI	GAGCTC	4 cut(s)	104, 474, 540, 735
Psp6I	CCWGG	2 cut(s)	831, 1211
PspGI	CCWGG	2 cut(s)	831, 1211
PspPI	GGNCC	5 cut(s)	544, 786, 841, 1570, 1670
PstNI	CAGNNNCTG	1 cut(s)	986
PsuI	RGATCY	3 cut(s)	79, 251, 850
PvuII	CAGCTG	1 cut(s)	1190
RsaI	GTAC	3 cut(s)	663, 979, 1534
RsaNI	GTAC	3 cut(s)	662, 978, 1533
RseI	CAYNNNNRTG	2 cut(s)	693, 707
SacI	GAGCTC	4 cut(s)	104, 474, 540, 735
SalI	GTCGAC	2 cut(s)	277, 1126
SatI	GCNGC	6 cut(s)	314, 344, 353, 356, 1033, 1191
Sau3AI	GATC	5 cut(s)	79, 165, 251, 850, 1090
Sau96I	GGNCC	5 cut(s)	544, 786, 841, 1570, 1670
SchI	GAGTC	2 cut(s)	217, 1067
ScrFI	CCNGG	4 cut(s)	646, 833, 1213, 1775
SduI	GDGCHC	6 cut(s)	104, 474, 540, 735, 1051, 1321
SfaNI	GCATC	4 cut(s)	664, 769, 1438, 1493
SfcI	CTRYAG	2 cut(s)	199, 873
SinI	GGWCC	3 cut(s)	786, 841, 1570
SmiMI	CAYNNNNRTG	2 cut(s)	693, 707
SmlI	CTYRAG	3 cut(s)	539, 854, 1559
SmoI	CTYRAG	3 cut(s)	539, 854, 1559
Sse9I	AATT	6 cut(s)	94, 594, 1222, 1467, 1526, 1751
SsiI	CCGC	7 cut(s)	53, 311, 314, 352, 355, 1300, 1691
SspI	AATATT	2 cut(s)	804, 1260
SspMI	CTAG	3 cut(s)	123, 659, 1481
SstI	GAGCTC	4 cut(s)	104, 474, 540, 735
StyD4I	CCNGG	4 cut(s)	644, 831, 1211, 1773
StyI	CCWWGG	2 cut(s)	1112, 1738
TaaI	ACNGT	9 cut(s)	163, 203, 367, 666, 717, 790, 1234, 1339, 1574
TaiI	ACGT	1 cut(s)	93
TaqI	TCGA	9 cut(s)	98, 114, 150, 233, 278, 847, 1051, 1101, 1127
TasI	AATT	6 cut(s)	94, 594, 1222, 1467, 1526, 1751
TatI	WGTACW	2 cut(s)	661, 1532
TauI	GCSGC	3 cut(s)	316, 355, 358
TfiI	GAWTC	2 cut(s)	62, 385
TscAI	CASTG	2 cut(s)	1237, 1723
TseFI	GTSAC	1 cut(s)	415
TseI	GCWGC	3 cut(s)	343, 1032, 1190
Tsp45I	GTSAC	1 cut(s)	415
TspDTI	ATGAA	8 cut(s)	924, 1119, 1286, 1448, 1469, 1617, 1676, 1688
TspGWI	ACGGA	4 cut(s)	153, 183, 785, 1189
TspRI	CASTG	2 cut(s)	1237, 1723
Van91I	CCANNNNNTGG	1 cut(s)	838
Vha464I	CTTAAG	1 cut(s)	854
VpaK11BI	GGWCC	3 cut(s)	786, 841, 1570
VspI	ATTAAT	1 cut(s)	1256
XapI	RAATTY	1 cut(s)	1526
XceI	RCATGY	1 cut(s)	1589
XmiI	GTMKAC	4 cut(s)	278, 506, 699, 1127
XspI	CTAG	3 cut(s)	123, 659, 1481
Zsp2I	ATGCAT	1 cut(s)	679

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.