Rh2BG182700

CDPK-related kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
16267244 .. 16269134
1891 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG182700.1

Sequence Viewer

Length: 984 bp
ATGGGTCTCTGCACCTCCAAACCCTCGTTCCCCAACTCCATCACTTCGTCTCCGCAGTCCGATTCTCAGGTCGGGAAAGATCCGGTGAAGGTCAATTCGAGCTCCGGCGATGTCGAAAACCCTAGAAATGAGCAGAACGGAGAGAAGGTCGAGGAGGAGACTGTGATCGCCGTCAAGAAGTCGCCGTTTTTTCCGTTCTACAGTCCGAGTCCGGCGCACTACTTCTTCTCCTCGAAGAAGTCTCCGGCGAGATCTCCGGCGAATGCCAGCGCGAAGTCGACGCCGAGCCGGTTCTTCAAGCGGCCGTTCCCGCCGCCGTCGCCGGCGAAGCACATAAGGGCGCTGCTGGCGCGGCGGCACGGGACGGTGAAGCCGAACGAGGCGATTCCGGAGGGGAGTGAGGTTGAGGGAGGTGTGACTGGGCTTGACAAGAGCTTTGGGTTCTCTAAGCATTTGAGTAACAAGTATGAGCTCGGTGAAGAGGTTGGCCGAGGGCATTTTGGGTATACTTGCAAAGCTACCTTCAAGAAGGGAGAGCTCAAGGGCCAGCAGGTTGCTGTCAAAGTCATCCCCAAAGTCAAGATGACTACTGCAATTGCCATTGAGGATGTGAGAAGGGAAGTCAAGATATTGAAAGCTTTGACCGGGCATAGCAATCTAGTACAGTTTTATGATGCATACGAAGACCATGATAATGTCTACATAGTTATGGAACTGTGCGAAGGAGGGGAGCTCTTAGATAGGATACTTGCAAGGGGTGGGAAATATACAGAGGAAGATGCAAGGACTGTGATGATACAAATATTAAATGTTGTCGCGTTTTGCCACCTCCAGGGCGTGGTCCACCGAGATCTTAAGCCAGAGAATTTTCTGTTTACATCAAAGGATGAAGATTCACAGTTGAAGGCTATAGACTTTGGCCTTTCAGATTTTGTGAAACCAGGTTGGTCAATACTTCTATTTATAATCCTCACAATTACTTGA

Protein Analysis

327

Amino Acids

36.14

Weight (kDa)

8.69

Isoelectric Point (pI)

55.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 156 - 314 9.9e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 157 - 312 2.2e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 965
Acc36I ACCTGC 1 cut(s) 541
AccB7I CCANNNNNTGG 1 cut(s) 838
AccI GTMKAC 3 cut(s) 278, 506, 699
AccII CGCG 3 cut(s) 272, 352, 818
AccIII TCCGGA 1 cut(s) 388
AciI CCGC 6 cut(s) 53, 301, 311, 314, 352, 355
AclWI GGATC 1 cut(s) 74
AcoI YGGCCR 2 cut(s) 302, 487
AcsI RAATTY 1 cut(s) 865
AcyI GRCGYC 1 cut(s) 281
AfaI GTAC 1 cut(s) 663
AfiI CCNNNNNNNGG 2 cut(s) 832, 838
AflII CTTAAG 1 cut(s) 854
AgsI TTSAA 4 cut(s) 298, 526, 634, 904
AjnI CCWGG 2 cut(s) 831, 940
AjuI GAANNNNNNNTTGG 2 cut(s) 11, 43
AluBI AGCT 7 cut(s) 102, 435, 472, 518, 538, 638, 733
AluI AGCT 7 cut(s) 102, 435, 472, 518, 538, 638, 733
Alw21I GWGCWC 4 cut(s) 104, 474, 540, 735
Alw26I GTCTC 4 cut(s) 11, 54, 152, 246
AlwI GGATC 1 cut(s) 74
Aor13HI TCCGGA 1 cut(s) 388
AoxI GGCC 4 cut(s) 302, 487, 544, 919
ApeKI GCWGC 1 cut(s) 343
ApoI RAATTY 1 cut(s) 865
ArsI GACNNNNNNTTYG 2 cut(s) 419, 451
AspLEI GCGC 4 cut(s) 217, 272, 343, 352
AspS9I GGNCC 2 cut(s) 544, 841
AsuC2I CCSGG 1 cut(s) 646
AsuHPI GGTGA 3 cut(s) 97, 379, 488
AvaII GGWCC 1 cut(s) 841
BanII GRGCYC 4 cut(s) 104, 474, 540, 735
BbsI GAAGAC 1 cut(s) 690
Bbv12I GWGCWC 4 cut(s) 104, 474, 540, 735
BbvI GCAGC 1 cut(s) 330
BccI CCATC 1 cut(s) 47
BceAI ACGGC 4 cut(s) 155, 169, 289, 301
BciT130I CCWGG 2 cut(s) 833, 942
BciVI GTATCC 1 cut(s) 738
BcnI CCSGG 1 cut(s) 646
BcoDI GTCTC 4 cut(s) 11, 54, 152, 246
BfaI CTAG 2 cut(s) 123, 659
BfmI CTRYAG 2 cut(s) 199, 909
BfoI RGCGCY 1 cut(s) 344
BfrI CTTAAG 1 cut(s) 854
BfuAI ACCTGC 1 cut(s) 541
BfuI GTATCC 1 cut(s) 738
BglII AGATCT 2 cut(s) 251, 850
BisI GCNGC 5 cut(s) 302, 314, 344, 353, 356
BlsI GCNGC 5 cut(s) 303, 315, 345, 354, 357
Bme1390I CCNGG 3 cut(s) 646, 833, 942
Bme18I GGWCC 1 cut(s) 841
BmgT120I GGNCC 2 cut(s) 544, 841
BmrFI CCNGG 3 cut(s) 646, 833, 942
BmrI ACTGGG 1 cut(s) 429
BmsI GCATC 2 cut(s) 664, 769
BmuI ACTGGG 1 cut(s) 429
BpiI GAAGAC 1 cut(s) 690
BplI GAGNNNNNCTC 2 cut(s) 717, 749
BpmI CTGGAG 1 cut(s) 815
BpuEI CTTGAG 1 cut(s) 524
BpuMI CCSGG 1 cut(s) 646
BsaHI GRCGYC 1 cut(s) 281
BsaI GGTCTC 1 cut(s) 11
BsaJI CCNNGG 2 cut(s) 490, 832
BsaWI WCCGGW 2 cut(s) 82, 388
BsaXI ACNNNNNCTCC 6 cut(s) 34, 64, 132, 162, 212, 242
Bsc4I CCNNNNNNNGG 2 cut(s) 832, 838
Bse118I RCCGGY 2 cut(s) 288, 322
Bse1I ACTGG 1 cut(s) 424
BseAI TCCGGA 1 cut(s) 388
BseBI CCWGG 2 cut(s) 833, 942
BseDI CCNNGG 2 cut(s) 490, 832
BseGI GGATG 3 cut(s) 567, 613, 892
BseLI CCNNNNNNNGG 2 cut(s) 832, 838
BseMII CTCAG 1 cut(s) 80
BseNI ACTGG 1 cut(s) 424
BseRI GAGGAG 3 cut(s) 167, 170, 220
BseX3I CGGCCG 1 cut(s) 302
BseXI GCAGC 1 cut(s) 330
Bsh1236I CGCG 3 cut(s) 272, 352, 818
Bsh1285I CGRYCG 1 cut(s) 305
BshFI GGCC 4 cut(s) 304, 489, 546, 921
BsiEI CGRYCG 1 cut(s) 305
BsiHKAI GWGCWC 4 cut(s) 104, 474, 540, 735
BsiSI CCGG 9 cut(s) 83, 105, 212, 245, 257, 289, 323, 389, 645
BslFI GGGAC 1 cut(s) 376
BslI CCNNNNNNNGG 2 cut(s) 832, 838
BsmAI GTCTC 4 cut(s) 11, 54, 152, 246
BsmBI CGTCTC 1 cut(s) 54
BsmFI GGGAC 1 cut(s) 376
BsmI GAATGC 1 cut(s) 268
BsnI GGCC 4 cut(s) 304, 489, 546, 921
Bso31I GGTCTC 1 cut(s) 11
Bsp1286I GDGCHC 4 cut(s) 104, 474, 540, 735
Bsp13I TCCGGA 1 cut(s) 388
Bsp143I GATC 4 cut(s) 79, 165, 251, 850
BspACI CCGC 6 cut(s) 53, 301, 311, 314, 352, 355
BspANI GGCC 4 cut(s) 304, 489, 546, 921
BspCNI CTCAG 1 cut(s) 79
BspEI TCCGGA 1 cut(s) 388
BspFNI CGCG 3 cut(s) 272, 352, 818
BspMI ACCTGC 1 cut(s) 541
BspPI GGATC 1 cut(s) 74
BspTI CTTAAG 1 cut(s) 854
BspTNI GGTCTC 1 cut(s) 11
BsrFI RCCGGY 2 cut(s) 288, 322
BsrI ACTGG 1 cut(s) 424
BssAI RCCGGY 2 cut(s) 288, 322
BssECI CCNNGG 2 cut(s) 490, 832
BssMI GATC 4 cut(s) 79, 165, 251, 850
BssNAI GTATAC 1 cut(s) 507
BssNI GRCGYC 1 cut(s) 281
Bst1107I GTATAC 1 cut(s) 507
Bst2UI CCWGG 2 cut(s) 833, 942
Bst4CI ACNGT 7 cut(s) 163, 203, 367, 666, 717, 790, 900
Bst6I CTCTTC 1 cut(s) 474
BstACI GRCGYC 1 cut(s) 281
BstAFI CTTAAG 1 cut(s) 854
BstC8I GCNNGC 4 cut(s) 268, 324, 348, 548
BstDEI CTNAG 3 cut(s) 66, 447, 736
BstF5I GGATG 3 cut(s) 567, 613, 892
BstFNI CGCG 3 cut(s) 272, 352, 818
BstH2I RGCGCY 1 cut(s) 344
BstHHI GCGC 4 cut(s) 217, 272, 343, 352
BstKTI GATC 4 cut(s) 82, 168, 254, 853
BstMAI GTCTC 4 cut(s) 11, 54, 152, 246
BstMBI GATC 4 cut(s) 79, 165, 251, 850
BstMCI CGRYCG 1 cut(s) 305
BstMWI GCNNNNNNNGC 6 cut(s) 310, 319, 328, 347, 349, 352
BstNI CCWGG 2 cut(s) 833, 942
BstSCI CCNGG 3 cut(s) 644, 831, 940
BstSFI CTRYAG 2 cut(s) 199, 909
BstUI CGCG 3 cut(s) 272, 352, 818
BstV1I GCAGC 1 cut(s) 330
BstV2I GAAGAC 1 cut(s) 690
BstX2I RGATCY 3 cut(s) 79, 251, 850
BstYI RGATCY 3 cut(s) 79, 251, 850
BstZ17I GTATAC 1 cut(s) 507
BstZI CGGCCG 1 cut(s) 302
BsuI GTATCC 1 cut(s) 738
BsuRI GGCC 4 cut(s) 304, 489, 546, 921
BtgZI GCGATG 1 cut(s) 123
BtsCI GGATG 3 cut(s) 567, 613, 892
BveI ACCTGC 1 cut(s) 541
Cac8I GCNNGC 4 cut(s) 268, 324, 348, 548
CfoI GCGC 4 cut(s) 217, 272, 343, 352
Cfr10I RCCGGY 2 cut(s) 288, 322
Cfr13I GGNCC 2 cut(s) 544, 841
CseI GACGC 1 cut(s) 289
CsiI ACCWGGT 1 cut(s) 940
Csp6I GTAC 1 cut(s) 662
CviAII CATG 1 cut(s) 689
CviQI GTAC 1 cut(s) 662
DdeI CTNAG 3 cut(s) 66, 447, 736
DpnI GATC 4 cut(s) 81, 167, 253, 852
DpnII GATC 4 cut(s) 79, 165, 251, 850
EaeI YGGCCR 2 cut(s) 302, 487
EagI CGGCCG 1 cut(s) 302
Eam1104I CTCTTC 1 cut(s) 474
EarI CTCTTC 1 cut(s) 474
Ecl136II GAGCTC 4 cut(s) 102, 472, 538, 733
EclXI CGGCCG 1 cut(s) 302
Eco24I GRGCYC 4 cut(s) 104, 474, 540, 735
Eco31I GGTCTC 1 cut(s) 11
Eco47I GGWCC 1 cut(s) 841
Eco52I CGGCCG 1 cut(s) 302
Eco53kI GAGCTC 4 cut(s) 102, 472, 538, 733
EcoICRI GAGCTC 4 cut(s) 102, 472, 538, 733
EcoRII CCWGG 2 cut(s) 831, 940
EcoT22I ATGCAT 1 cut(s) 679
EcoT38I GRGCYC 4 cut(s) 104, 474, 540, 735
Esp3I CGTCTC 1 cut(s) 54
FaeI CATG 1 cut(s) 692
FaqI GGGAC 1 cut(s) 376
FatI CATG 1 cut(s) 688
FauI CCCGC 1 cut(s) 318
FblI GTMKAC 3 cut(s) 278, 506, 699
Fnu4HI GCNGC 5 cut(s) 302, 314, 344, 353, 356
FokI GGATG 3 cut(s) 554, 620, 899
FriOI GRGCYC 4 cut(s) 104, 474, 540, 735
Fsp4HI GCNGC 5 cut(s) 302, 314, 344, 353, 356
FspBI CTAG 2 cut(s) 123, 659
GlaI GCGC 4 cut(s) 216, 271, 342, 351
GluI GCNGC 5 cut(s) 302, 314, 344, 353, 356
GsuI CTGGAG 1 cut(s) 815
HaeII RGCGCY 1 cut(s) 344
HaeIII GGCC 4 cut(s) 304, 489, 546, 921
HapII CCGG 9 cut(s) 83, 105, 212, 245, 257, 289, 323, 389, 645
HgaI GACGC 1 cut(s) 289
HhaI GCGC 4 cut(s) 217, 272, 343, 352
Hin1I GRCGYC 1 cut(s) 281
Hin1II CATG 1 cut(s) 692
Hin6I GCGC 4 cut(s) 215, 270, 341, 350
HinP1I GCGC 4 cut(s) 215, 270, 341, 350
HincII GTYRAC 1 cut(s) 279
HindII GTYRAC 1 cut(s) 279
HindIII AAGCTT 1 cut(s) 636
HinfI GANTC 4 cut(s) 62, 208, 385, 893
HpaII CCGG 9 cut(s) 83, 105, 212, 245, 257, 289, 323, 389, 645
HphI GGTGA 3 cut(s) 97, 379, 488
Hpy166II GTNNAC 5 cut(s) 279, 507, 700, 844, 876
Hpy188I TCNGA 3 cut(s) 61, 207, 928
Hpy188III TCNNGA 6 cut(s) 73, 175, 389, 526, 580, 625
Hpy8I GTNNAC 5 cut(s) 279, 507, 700, 844, 876
Hpy99I CGWCG 2 cut(s) 283, 322
HpyAV CCTTC 7 cut(s) 82, 139, 523, 532, 609, 716, 898
HpyCH4III ACNGT 7 cut(s) 163, 203, 367, 666, 717, 790, 900
HpyCH4V TGCA 6 cut(s) 12, 513, 593, 677, 752, 782
HpyF10VI GCNNNNNNNGC 6 cut(s) 310, 319, 328, 347, 349, 352
HpyF3I CTNAG 3 cut(s) 66, 447, 736
Hsp92I GRCGYC 1 cut(s) 281
Hsp92II CATG 1 cut(s) 692
HspAI GCGC 4 cut(s) 215, 270, 341, 350
Kpn2I TCCGGA 1 cut(s) 388
KroI GCCGGC 1 cut(s) 322
KroNI GCCGGC 1 cut(s) 324
Kzo9I GATC 4 cut(s) 79, 165, 251, 850
LmnI GCTCC 2 cut(s) 107, 730
Lsp1109I GCAGC 1 cut(s) 330
LweI GCATC 2 cut(s) 664, 769
MabI ACCWGGT 1 cut(s) 940
MaeI CTAG 2 cut(s) 123, 659
MaeIII GTNAC 2 cut(s) 415, 458
MalI GATC 4 cut(s) 81, 167, 253, 852
MboI GATC 4 cut(s) 79, 165, 251, 850
MboII GAAGA 7 cut(s) 217, 247, 286, 491, 695, 788, 902
MfeI CAATTG 1 cut(s) 594
MflI RGATCY 3 cut(s) 79, 251, 850
MhlI GDGCHC 4 cut(s) 104, 474, 540, 735
MluCI AATT 4 cut(s) 94, 594, 865, 975
MlyI GAGTC 1 cut(s) 217
Mph1103I ATGCAT 1 cut(s) 679
MreI CGCCGGCG 1 cut(s) 322
MroI TCCGGA 1 cut(s) 388
MroNI GCCGGC 1 cut(s) 322
MseI TTAA 2 cut(s) 806, 855
MslI CAYNNNNRTG 2 cut(s) 693, 707
MspCI CTTAAG 1 cut(s) 854
MspI CCGG 9 cut(s) 83, 105, 212, 245, 257, 289, 323, 389, 645
MspR9I CCNGG 3 cut(s) 646, 833, 942
MunI CAATTG 1 cut(s) 594
Mva1269I GAATGC 1 cut(s) 268
MvaI CCWGG 2 cut(s) 833, 942
MvnI CGCG 3 cut(s) 272, 352, 818
MwoI GCNNNNNNNGC 6 cut(s) 310, 319, 328, 347, 349, 352
NaeI GCCGGC 1 cut(s) 324
NciI CCSGG 1 cut(s) 646
NdeII GATC 4 cut(s) 79, 165, 251, 850
NgoMIV GCCGGC 1 cut(s) 322
NlaIII CATG 1 cut(s) 692
NmeAIII GCCGAG 2 cut(s) 309, 515
NmuCI GTSAC 1 cut(s) 415
NsiI ATGCAT 1 cut(s) 679
PcsI WCGNNNNNNNCGW 1 cut(s) 371
PctI GAATGC 1 cut(s) 268
PdiI GCCGGC 1 cut(s) 324
PfeI GAWTC 3 cut(s) 62, 385, 893
PflMI CCANNNNNTGG 1 cut(s) 838
PkrI GCNGC 5 cut(s) 303, 315, 345, 354, 357
PleI GAGTC 1 cut(s) 216
PpsI GAGTC 1 cut(s) 216
PsiI TTATAA 1 cut(s) 965
Psp124BI GAGCTC 4 cut(s) 104, 474, 540, 735
Psp6I CCWGG 2 cut(s) 831, 940
PspGI CCWGG 2 cut(s) 831, 940
PspPI GGNCC 2 cut(s) 544, 841
PsuI RGATCY 3 cut(s) 79, 251, 850
RsaI GTAC 1 cut(s) 663
RsaNI GTAC 1 cut(s) 662
RseI CAYNNNNRTG 2 cut(s) 693, 707
SacI GAGCTC 4 cut(s) 104, 474, 540, 735
SalI GTCGAC 1 cut(s) 277
SaqAI TTAA 2 cut(s) 806, 855
SatI GCNGC 5 cut(s) 302, 314, 344, 353, 356
Sau3AI GATC 4 cut(s) 79, 165, 251, 850
Sau96I GGNCC 2 cut(s) 544, 841
SchI GAGTC 1 cut(s) 217
ScrFI CCNGG 3 cut(s) 646, 833, 942
SduI GDGCHC 4 cut(s) 104, 474, 540, 735
SexAI ACCWGGT 1 cut(s) 940
SfaNI GCATC 2 cut(s) 664, 769
SfcI CTRYAG 2 cut(s) 199, 909
SgrAI CRCCGGYG 1 cut(s) 322
SinI GGWCC 1 cut(s) 841
SmiMI CAYNNNNRTG 2 cut(s) 693, 707
SmlI CTYRAG 2 cut(s) 539, 854
SmoI CTYRAG 2 cut(s) 539, 854
Sse9I AATT 4 cut(s) 94, 594, 865, 975
SsiI CCGC 6 cut(s) 53, 301, 311, 314, 352, 355
SspI AATATT 1 cut(s) 804
SspMI CTAG 2 cut(s) 123, 659
SstI GAGCTC 4 cut(s) 104, 474, 540, 735
StyD4I CCNGG 3 cut(s) 644, 831, 940
TaaI ACNGT 7 cut(s) 163, 203, 367, 666, 717, 790, 900
TaqI TCGA 5 cut(s) 98, 114, 150, 233, 278
TasI AATT 4 cut(s) 94, 594, 865, 975
TatI WGTACW 1 cut(s) 661
TauI GCSGC 4 cut(s) 304, 316, 355, 358
TfiI GAWTC 3 cut(s) 62, 385, 893
Tru1I TTAA 2 cut(s) 806, 855
Tru9I TTAA 2 cut(s) 806, 855
TseFI GTSAC 1 cut(s) 415
TseI GCWGC 1 cut(s) 343
Tsp45I GTSAC 1 cut(s) 415
TspDTI ATGAA 1 cut(s) 903
TspGWI ACGGA 2 cut(s) 153, 183
Van91I CCANNNNNTGG 1 cut(s) 838
Vha464I CTTAAG 1 cut(s) 854
VpaK11BI GGWCC 1 cut(s) 841
XapI RAATTY 1 cut(s) 865
XmiI GTMKAC 3 cut(s) 278, 506, 699
XspI CTAG 2 cut(s) 123, 659
Zsp2I ATGCAT 1 cut(s) 679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.