CDPK-related kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50530 AT3G50530 |
| fragaria_vesca | FvH4_1g15620 FvH4_1g15620 |
| malus_domestica | MD02G1168300.v1.1 MD15G1280600.v1.1 |
| prunus_persica | Prupe.7G136700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0104821 RchiOBHm_Chr2g0104961 |
| rosa_laevigata | RLG00000017360 RLG00000017361 RLG00000017379 |
| rosa_multiflora | Rmu_co8294349.1_g000001 Rmu_sc0001247.1_g000003 Rmu_sc0002645.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00138620 Rroxscaffold_2G00138750 Rroxscaffold_2G00138760 |
| rosa_rugosa | Rorug02G0123300 Rorug02G0124100 |
| rosa_samantha | Rh2AG173300 Rh2AG173400 Rh2AG174900 Rh2BG181000 Rh2BG182700 Rh2BG182800 Rh2CG178300 Rh2CG179400 Rh2DG179500 Rh2DG179600 Rh2DG181300 |
| rosa_wichuraiana | Rw2G013650 Rw2G013750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 553 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 850 |
| AccI | GTMKAC | 4 cut(s) | 290, 518, 711, 1154 |
| AccII | CGCG | 1 cut(s) | 364 |
| AccIII | TCCGGA | 1 cut(s) | 400 |
| AclWI | GGATC | 2 cut(s) | 74, 1112 |
| AcoI | YGGCCR | 3 cut(s) | 84, 314, 1142 |
| AcsI | RAATTY | 2 cut(s) | 1266, 1553 |
| AcyI | GRCGYC | 1 cut(s) | 293 |
| AdeI | CACNNNGTG | 1 cut(s) | 1574 |
| AfaI | GTAC | 2 cut(s) | 1006, 1561 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 844, 847, 850, 1588 |
| AflII | CTTAAG | 1 cut(s) | 866 |
| AgeI | ACCGGT | 1 cut(s) | 300 |
| AgsI | TTSAA | 8 cut(s) | 310, 646, 820, 895, 1189, 1265, 1291, 1387 |
| AjnI | CCWGG | 2 cut(s) | 843, 1238 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 11, 43, 1677, 1709 |
| Alw21I | GWGCWC | 5 cut(s) | 107, 138, 486, 552, 747 |
| Alw26I | GTCTC | 3 cut(s) | 11, 167, 258 |
| AlwI | GGATC | 2 cut(s) | 74, 1112 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1013 |
| Aor13HI | TCCGGA | 1 cut(s) | 400 |
| AoxI | GGCC | 5 cut(s) | 84, 314, 1142, 1452, 1696 |
| ApeKI | GCWGC | 4 cut(s) | 355, 559, 1059, 1217 |
| ApoI | RAATTY | 2 cut(s) | 1266, 1553 |
| AsiGI | ACCGGT | 1 cut(s) | 300 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 302 |
| AspLEI | GCGC | 5 cut(s) | 232, 284, 355, 364, 1182 |
| AspS9I | GGNCC | 4 cut(s) | 798, 853, 1597, 1697 |
| AsuC2I | CCSGG | 3 cut(s) | 227, 658, 1802 |
| AsuHPI | GGTGA | 2 cut(s) | 391, 1311 |
| AvaII | GGWCC | 3 cut(s) | 798, 853, 1597 |
| BalI | TGGCCA | 1 cut(s) | 1144 |
| BanII | GRGCYC | 7 cut(s) | 107, 227, 486, 552, 747, 1078, 1348 |
| BbsI | GAAGAC | 1 cut(s) | 702 |
| Bbv12I | GWGCWC | 5 cut(s) | 107, 138, 486, 552, 747 |
| BbvI | GCAGC | 4 cut(s) | 342, 571, 1071, 1204 |
| BccI | CCATC | 3 cut(s) | 864, 1534, 1742 |
| BceAI | ACGGC | 6 cut(s) | 170, 184, 301, 313, 1047, 1467 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1598, 1632 |
| BciT130I | CCWGG | 2 cut(s) | 845, 1240 |
| BcnI | CCSGG | 3 cut(s) | 227, 658, 1802 |
| BcoDI | GTCTC | 3 cut(s) | 11, 167, 258 |
| BfaI | CTAG | 4 cut(s) | 126, 671, 1508, 1797 |
| BfmI | CTRYAG | 3 cut(s) | 214, 900, 1155 |
| BfoI | RGCGCY | 3 cut(s) | 285, 356, 1183 |
| BfrI | CTTAAG | 1 cut(s) | 866 |
| BfuAI | ACCTGC | 1 cut(s) | 553 |
| BglII | AGATCT | 2 cut(s) | 263, 862 |
| Bme1390I | CCNGG | 5 cut(s) | 227, 658, 845, 1240, 1802 |
| Bme18I | GGWCC | 3 cut(s) | 798, 853, 1597 |
| BmgT120I | GGNCC | 4 cut(s) | 798, 853, 1597, 1697 |
| BmrFI | CCNGG | 5 cut(s) | 227, 658, 845, 1240, 1802 |
| BmrI | ACTGGG | 1 cut(s) | 441 |
| BmsI | GCATC | 4 cut(s) | 676, 781, 1465, 1520 |
| BmuI | ACTGGG | 1 cut(s) | 441 |
| BoxI | GACNNNNGTC | 1 cut(s) | 909 |
| BpiI | GAAGAC | 1 cut(s) | 702 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 729, 761 |
| BpmI | CTGGAG | 2 cut(s) | 827, 1042 |
| BpuEI | CTTGAG | 2 cut(s) | 536, 1607 |
| BpuMI | CCSGG | 3 cut(s) | 227, 658, 1802 |
| BsaHI | GRCGYC | 1 cut(s) | 293 |
| BsaI | GGTCTC | 1 cut(s) | 11 |
| BsaJI | CCNNGG | 6 cut(s) | 87, 844, 1139, 1199, 1238, 1765 |
| BsaWI | WCCGGW | 2 cut(s) | 300, 400 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 224, 254, 480, 510, 1015, 1045 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 844, 847, 850, 1588 |
| Bse118I | RCCGGY | 3 cut(s) | 22, 300, 334 |
| Bse1I | ACTGG | 2 cut(s) | 436, 1680 |
| Bse3DI | GCAATG | 1 cut(s) | 1485 |
| BseAI | TCCGGA | 1 cut(s) | 400 |
| BseBI | CCWGG | 2 cut(s) | 845, 1240 |
| BseDI | CCNNGG | 6 cut(s) | 87, 844, 1139, 1199, 1238, 1765 |
| BseGI | GGATG | 6 cut(s) | 118, 579, 625, 883, 1234, 1545 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 844, 847, 850, 1588 |
| BseMI | GCAATG | 1 cut(s) | 1485 |
| BseMII | CTCAG | 3 cut(s) | 80, 1074, 1748 |
| BseNI | ACTGG | 2 cut(s) | 436, 1680 |
| BseRI | GAGGAG | 3 cut(s) | 161, 185, 232 |
| BseX3I | CGGCCG | 1 cut(s) | 314 |
| BseXI | GCAGC | 4 cut(s) | 342, 571, 1071, 1204 |
| BsgI | GTGCAG | 1 cut(s) | 1203 |
| Bsh1236I | CGCG | 1 cut(s) | 364 |
| Bsh1285I | CGRYCG | 1 cut(s) | 317 |
| BshFI | GGCC | 5 cut(s) | 86, 316, 1144, 1454, 1698 |
| BshTI | ACCGGT | 1 cut(s) | 300 |
| BsiEI | CGRYCG | 1 cut(s) | 317 |
| BsiHKAI | GWGCWC | 5 cut(s) | 107, 138, 486, 552, 747 |
| BslFI | GGGAC | 2 cut(s) | 388, 1691 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 844, 847, 850, 1588 |
| BsmAI | GTCTC | 3 cut(s) | 11, 167, 258 |
| BsmFI | GGGAC | 2 cut(s) | 388, 1691 |
| BsmI | GAATGC | 1 cut(s) | 280 |
| BsnI | GGCC | 5 cut(s) | 86, 316, 1144, 1454, 1698 |
| Bso31I | GGTCTC | 1 cut(s) | 11 |
| Bsp1286I | GDGCHC | 8 cut(s) | 107, 138, 227, 486, 552, 747, 1078, 1348 |
| Bsp13I | TCCGGA | 1 cut(s) | 400 |
| Bsp1407I | TGTACA | 1 cut(s) | 1559 |
| Bsp143I | GATC | 5 cut(s) | 79, 180, 263, 862, 1117 |
| BspANI | GGCC | 5 cut(s) | 86, 316, 1144, 1454, 1698 |
| BspCNI | CTCAG | 3 cut(s) | 79, 1075, 1749 |
| BspEI | TCCGGA | 1 cut(s) | 400 |
| BspFNI | CGCG | 1 cut(s) | 364 |
| BspHI | TCATGA | 2 cut(s) | 1296, 1726 |
| BspMI | ACCTGC | 1 cut(s) | 553 |
| BspPI | GGATC | 2 cut(s) | 74, 1112 |
| BspTI | CTTAAG | 1 cut(s) | 866 |
| BspTNI | GGTCTC | 1 cut(s) | 11 |
| BsrDI | GCAATG | 1 cut(s) | 1485 |
| BsrFI | RCCGGY | 3 cut(s) | 22, 300, 334 |
| BsrGI | TGTACA | 1 cut(s) | 1559 |
| BsrI | ACTGG | 2 cut(s) | 436, 1680 |
| BssAI | RCCGGY | 3 cut(s) | 22, 300, 334 |
| BssECI | CCNNGG | 6 cut(s) | 87, 844, 1139, 1199, 1238, 1765 |
| BssMI | GATC | 5 cut(s) | 79, 180, 263, 862, 1117 |
| BssNAI | GTATAC | 1 cut(s) | 519 |
| BssNI | GRCGYC | 1 cut(s) | 293 |
| BssT1I | CCWWGG | 3 cut(s) | 87, 1139, 1765 |
| Bst1107I | GTATAC | 1 cut(s) | 519 |
| Bst2UI | CCWGG | 2 cut(s) | 845, 1240 |
| Bst6I | CTCTTC | 1 cut(s) | 162 |
| BstACI | GRCGYC | 1 cut(s) | 293 |
| BstAFI | CTTAAG | 1 cut(s) | 866 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1475, 1496 |
| BstAUI | TGTACA | 1 cut(s) | 1559 |
| BstC8I | GCNNGC | 4 cut(s) | 24, 280, 336, 360 |
| BstDEI | CTNAG | 7 cut(s) | 66, 459, 748, 1083, 1435, 1571, 1757 |
| BstDSI | CCRYGG | 1 cut(s) | 1199 |
| BstF5I | GGATG | 6 cut(s) | 118, 579, 625, 883, 1234, 1545 |
| BstFNI | CGCG | 1 cut(s) | 364 |
| BstH2I | RGCGCY | 3 cut(s) | 285, 356, 1183 |
| BstHHI | GCGC | 5 cut(s) | 232, 284, 355, 364, 1182 |
| BstKTI | GATC | 5 cut(s) | 82, 183, 266, 865, 1120 |
| BstMAI | GTCTC | 3 cut(s) | 11, 167, 258 |
| BstMBI | GATC | 5 cut(s) | 79, 180, 263, 862, 1117 |
| BstMCI | CGRYCG | 1 cut(s) | 317 |
| BstNI | CCWGG | 2 cut(s) | 845, 1240 |
| BstNSI | RCATGY | 1 cut(s) | 1616 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 909 |
| BstSCI | CCNGG | 5 cut(s) | 225, 656, 843, 1238, 1800 |
| BstSFI | CTRYAG | 3 cut(s) | 214, 900, 1155 |
| BstUI | CGCG | 1 cut(s) | 364 |
| BstV1I | GCAGC | 4 cut(s) | 342, 571, 1071, 1204 |
| BstV2I | GAAGAC | 1 cut(s) | 702 |
| BstX2I | RGATCY | 3 cut(s) | 79, 263, 862 |
| BstYI | RGATCY | 3 cut(s) | 79, 263, 862 |
| BstZ17I | GTATAC | 1 cut(s) | 519 |
| BstZI | CGGCCG | 1 cut(s) | 314 |
| BsuRI | GGCC | 5 cut(s) | 86, 316, 1144, 1454, 1698 |
| BtgI | CCRYGG | 1 cut(s) | 1199 |
| BtgZI | GCGATG | 1 cut(s) | 1497 |
| BtsCI | GGATG | 6 cut(s) | 118, 579, 625, 883, 1234, 1545 |
| BtsIMutI | CAGTG | 1 cut(s) | 1257 |
| BveI | ACCTGC | 1 cut(s) | 553 |
| Cac8I | GCNNGC | 4 cut(s) | 24, 280, 336, 360 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1013 |
| CciI | TCATGA | 2 cut(s) | 1296, 1726 |
| CfoI | GCGC | 5 cut(s) | 232, 284, 355, 364, 1182 |
| Cfr10I | RCCGGY | 3 cut(s) | 22, 300, 334 |
| Cfr13I | GGNCC | 4 cut(s) | 798, 853, 1597, 1697 |
| CseI | GACGC | 1 cut(s) | 301 |
| Csp6I | GTAC | 2 cut(s) | 1005, 1560 |
| CspAI | ACCGGT | 1 cut(s) | 300 |
| CviAII | CATG | 6 cut(s) | 701, 1297, 1613, 1715, 1727, 1787 |
| CviQI | GTAC | 2 cut(s) | 1005, 1560 |
| DdeI | CTNAG | 7 cut(s) | 66, 459, 748, 1083, 1435, 1571, 1757 |
| DpnI | GATC | 5 cut(s) | 81, 182, 265, 864, 1119 |
| DpnII | GATC | 5 cut(s) | 79, 180, 263, 862, 1117 |
| DraIII | CACNNNGTG | 1 cut(s) | 1574 |
| EaeI | YGGCCR | 3 cut(s) | 84, 314, 1142 |
| EagI | CGGCCG | 1 cut(s) | 314 |
| Eam1104I | CTCTTC | 1 cut(s) | 162 |
| EarI | CTCTTC | 1 cut(s) | 162 |
| EciI | GGCGGA | 2 cut(s) | 125, 177 |
| Ecl136II | GAGCTC | 4 cut(s) | 105, 484, 550, 745 |
| EclXI | CGGCCG | 1 cut(s) | 314 |
| Eco130I | CCWWGG | 3 cut(s) | 87, 1139, 1765 |
| Eco24I | GRGCYC | 7 cut(s) | 107, 227, 486, 552, 747, 1078, 1348 |
| Eco31I | GGTCTC | 1 cut(s) | 11 |
| Eco47I | GGWCC | 3 cut(s) | 798, 853, 1597 |
| Eco52I | CGGCCG | 1 cut(s) | 314 |
| Eco53kI | GAGCTC | 4 cut(s) | 105, 484, 550, 745 |
| EcoICRI | GAGCTC | 4 cut(s) | 105, 484, 550, 745 |
| EcoRII | CCWGG | 2 cut(s) | 843, 1238 |
| EcoT14I | CCWWGG | 3 cut(s) | 87, 1139, 1765 |
| EcoT22I | ATGCAT | 1 cut(s) | 1525 |
| EcoT38I | GRGCYC | 7 cut(s) | 107, 227, 486, 552, 747, 1078, 1348 |
| ErhI | CCWWGG | 3 cut(s) | 87, 1139, 1765 |
| FaeI | CATG | 6 cut(s) | 704, 1300, 1616, 1718, 1730, 1790 |
| FaqI | GGGAC | 2 cut(s) | 388, 1691 |
| FatI | CATG | 6 cut(s) | 700, 1296, 1612, 1714, 1726, 1786 |
| FauI | CCCGC | 2 cut(s) | 39, 330 |
| FauNDI | CATATG | 1 cut(s) | 1627 |
| FblI | GTMKAC | 4 cut(s) | 290, 518, 711, 1154 |
| FokI | GGATG | 6 cut(s) | 125, 566, 632, 890, 1221, 1552 |
| FriOI | GRGCYC | 7 cut(s) | 107, 227, 486, 552, 747, 1078, 1348 |
| FspBI | CTAG | 4 cut(s) | 126, 671, 1508, 1797 |
| GlaI | GCGC | 5 cut(s) | 231, 283, 354, 363, 1181 |
| GsuI | CTGGAG | 2 cut(s) | 827, 1042 |
| HaeII | RGCGCY | 3 cut(s) | 285, 356, 1183 |
| HaeIII | GGCC | 5 cut(s) | 86, 316, 1144, 1454, 1698 |
| HgaI | GACGC | 1 cut(s) | 301 |
| HhaI | GCGC | 5 cut(s) | 232, 284, 355, 364, 1182 |
| Hin1I | GRCGYC | 1 cut(s) | 293 |
| Hin1II | CATG | 6 cut(s) | 704, 1300, 1616, 1718, 1730, 1790 |
| Hin6I | GCGC | 5 cut(s) | 230, 282, 353, 362, 1180 |
| HinP1I | GCGC | 5 cut(s) | 230, 282, 353, 362, 1180 |
| HincII | GTYRAC | 1 cut(s) | 291 |
| HindII | GTYRAC | 1 cut(s) | 291 |
| HindIII | AAGCTT | 2 cut(s) | 1224, 1432 |
| HinfI | GANTC | 7 cut(s) | 62, 397, 453, 757, 884, 1085, 1770 |
| HphI | GGTGA | 2 cut(s) | 391, 1311 |
| Hpy166II | GTNNAC | 5 cut(s) | 291, 519, 712, 1155, 1579 |
| Hpy188I | TCNGA | 5 cut(s) | 61, 222, 488, 919, 1684 |
| Hpy8I | GTNNAC | 5 cut(s) | 291, 519, 712, 1155, 1579 |
| Hpy99I | CGWCG | 3 cut(s) | 52, 295, 334 |
| HpyAV | CCTTC | 9 cut(s) | 535, 621, 640, 889, 1381, 1477, 1530, 1640, 1710 |
| HpyCH4IV | ACGT | 1 cut(s) | 533 |
| HpyF3I | CTNAG | 7 cut(s) | 66, 459, 748, 1083, 1435, 1571, 1757 |
| HpySE526I | ACGT | 1 cut(s) | 533 |
| Hsp92I | GRCGYC | 1 cut(s) | 293 |
| Hsp92II | CATG | 6 cut(s) | 704, 1300, 1616, 1718, 1730, 1790 |
| HspAI | GCGC | 5 cut(s) | 230, 282, 353, 362, 1180 |
| Kpn2I | TCCGGA | 1 cut(s) | 400 |
| KroI | GCCGGC | 2 cut(s) | 22, 334 |
| KroNI | GCCGGC | 2 cut(s) | 24, 336 |
| Kzo9I | GATC | 5 cut(s) | 79, 180, 263, 862, 1117 |
| LmnI | GCTCC | 3 cut(s) | 742, 1390, 1606 |
| Lsp1109I | GCAGC | 4 cut(s) | 342, 571, 1071, 1204 |
| LweI | GCATC | 4 cut(s) | 676, 781, 1465, 1520 |
| MaeI | CTAG | 4 cut(s) | 126, 671, 1508, 1797 |
| MaeII | ACGT | 1 cut(s) | 533 |
| MaeIII | GTNAC | 2 cut(s) | 470, 987 |
| MalI | GATC | 5 cut(s) | 81, 182, 265, 864, 1119 |
| MboI | GATC | 5 cut(s) | 79, 180, 263, 862, 1117 |
| MboII | GAAGA | 9 cut(s) | 179, 259, 298, 503, 707, 800, 893, 1312, 1715 |
| MfeI | CAATTG | 1 cut(s) | 606 |
| MflI | RGATCY | 3 cut(s) | 79, 263, 862 |
| MhlI | GDGCHC | 8 cut(s) | 107, 138, 227, 486, 552, 747, 1078, 1348 |
| MlsI | TGGCCA | 1 cut(s) | 1144 |
| MluCI | AATT | 7 cut(s) | 97, 606, 677, 1249, 1266, 1494, 1553 |
| MluNI | TGGCCA | 1 cut(s) | 1144 |
| MlyI | GAGTC | 1 cut(s) | 1094 |
| MmeI | TCCRAC | 1 cut(s) | 39 |
| Mox20I | TGGCCA | 1 cut(s) | 1144 |
| Mph1103I | ATGCAT | 1 cut(s) | 1525 |
| MreI | CGCCGGCG | 1 cut(s) | 334 |
| MroI | TCCGGA | 1 cut(s) | 400 |
| MroNI | GCCGGC | 2 cut(s) | 22, 334 |
| MroXI | GAANNNNTTC | 1 cut(s) | 302 |
| MscI | TGGCCA | 1 cut(s) | 1144 |
| MseI | TTAA | 7 cut(s) | 537, 867, 945, 1229, 1245, 1340, 1518 |
| MslI | CAYNNNNRTG | 3 cut(s) | 705, 719, 1746 |
| Msp20I | TGGCCA | 1 cut(s) | 1144 |
| MspA1I | CMGCKG | 1 cut(s) | 1217 |
| MspCI | CTTAAG | 1 cut(s) | 866 |
| MspR9I | CCNGG | 5 cut(s) | 227, 658, 845, 1240, 1802 |
| MunI | CAATTG | 1 cut(s) | 606 |
| Mva1269I | GAATGC | 1 cut(s) | 280 |
| MvaI | CCWGG | 2 cut(s) | 845, 1240 |
| MvnI | CGCG | 1 cut(s) | 364 |
| NaeI | GCCGGC | 2 cut(s) | 24, 336 |
| NciI | CCSGG | 3 cut(s) | 227, 658, 1802 |
| NdeI | CATATG | 1 cut(s) | 1627 |
| NdeII | GATC | 5 cut(s) | 79, 180, 263, 862, 1117 |
| NgoMIV | GCCGGC | 2 cut(s) | 22, 334 |
| NlaIII | CATG | 6 cut(s) | 704, 1300, 1616, 1718, 1730, 1790 |
| NmeAIII | GCCGAG | 2 cut(s) | 86, 135 |
| NsiI | ATGCAT | 1 cut(s) | 1525 |
| NspI | RCATGY | 1 cut(s) | 1616 |
| PagI | TCATGA | 2 cut(s) | 1296, 1726 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 383 |
| PctI | GAATGC | 1 cut(s) | 280 |
| PdiI | GCCGGC | 2 cut(s) | 24, 336 |
| PdmI | GAANNNNTTC | 1 cut(s) | 302 |
| PfeI | GAWTC | 6 cut(s) | 62, 397, 453, 757, 884, 1770 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 850 |
| PinAI | ACCGGT | 1 cut(s) | 300 |
| PleI | GAGTC | 1 cut(s) | 1093 |
| PpsI | GAGTC | 1 cut(s) | 1093 |
| PshAI | GACNNNNGTC | 1 cut(s) | 909 |
| Psp124BI | GAGCTC | 4 cut(s) | 107, 486, 552, 747 |
| Psp6I | CCWGG | 2 cut(s) | 843, 1238 |
| PspGI | CCWGG | 2 cut(s) | 843, 1238 |
| PspPI | GGNCC | 4 cut(s) | 798, 853, 1597, 1697 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1013 |
| PsuI | RGATCY | 3 cut(s) | 79, 263, 862 |
| PvuII | CAGCTG | 1 cut(s) | 1217 |
| RsaI | GTAC | 2 cut(s) | 1006, 1561 |
| RsaNI | GTAC | 2 cut(s) | 1005, 1560 |
| RseI | CAYNNNNRTG | 3 cut(s) | 705, 719, 1746 |
| SacI | GAGCTC | 4 cut(s) | 107, 486, 552, 747 |
| SalI | GTCGAC | 1 cut(s) | 289 |
| SaqAI | TTAA | 7 cut(s) | 537, 867, 945, 1229, 1245, 1340, 1518 |
| Sau3AI | GATC | 5 cut(s) | 79, 180, 263, 862, 1117 |
| Sau96I | GGNCC | 4 cut(s) | 798, 853, 1597, 1697 |
| SchI | GAGTC | 1 cut(s) | 1094 |
| ScrFI | CCNGG | 5 cut(s) | 227, 658, 845, 1240, 1802 |
| SduI | GDGCHC | 8 cut(s) | 107, 138, 227, 486, 552, 747, 1078, 1348 |
| SfaNI | GCATC | 4 cut(s) | 676, 781, 1465, 1520 |
| SfcI | CTRYAG | 3 cut(s) | 214, 900, 1155 |
| SgrAI | CRCCGGYG | 1 cut(s) | 334 |
| SinI | GGWCC | 3 cut(s) | 798, 853, 1597 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 705, 719, 1746 |
| SmlI | CTYRAG | 3 cut(s) | 551, 866, 1586 |
| SmoI | CTYRAG | 3 cut(s) | 551, 866, 1586 |
| Sse9I | AATT | 7 cut(s) | 97, 606, 677, 1249, 1266, 1494, 1553 |
| SspI | AATATT | 2 cut(s) | 816, 1287 |
| SspMI | CTAG | 4 cut(s) | 126, 671, 1508, 1797 |
| SstI | GAGCTC | 4 cut(s) | 107, 486, 552, 747 |
| StyD4I | CCNGG | 5 cut(s) | 225, 656, 843, 1238, 1800 |
| StyI | CCWWGG | 3 cut(s) | 87, 1139, 1765 |
| TaiI | ACGT | 1 cut(s) | 536 |
| TaqI | TCGA | 6 cut(s) | 101, 245, 290, 859, 1078, 1638 |
| TasI | AATT | 7 cut(s) | 97, 606, 677, 1249, 1266, 1494, 1553 |
| TatI | WGTACW | 1 cut(s) | 1559 |
| TauI | GCSGC | 6 cut(s) | 55, 162, 316, 328, 367, 370 |
| TfiI | GAWTC | 6 cut(s) | 62, 397, 453, 757, 884, 1770 |
| Tru1I | TTAA | 7 cut(s) | 537, 867, 945, 1229, 1245, 1340, 1518 |
| Tru9I | TTAA | 7 cut(s) | 537, 867, 945, 1229, 1245, 1340, 1518 |
| TscAI | CASTG | 1 cut(s) | 1264 |
| TseI | GCWGC | 4 cut(s) | 355, 559, 1059, 1217 |
| TspGWI | ACGGA | 6 cut(s) | 156, 198, 797, 1216, 1316, 1693 |
| TspRI | CASTG | 1 cut(s) | 1264 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 850 |
| Vha464I | CTTAAG | 1 cut(s) | 866 |
| VpaK11BI | GGWCC | 3 cut(s) | 798, 853, 1597 |
| XapI | RAATTY | 2 cut(s) | 1266, 1553 |
| XceI | RCATGY | 1 cut(s) | 1616 |
| XmiI | GTMKAC | 4 cut(s) | 290, 518, 711, 1154 |
| XmnI | GAANNNNTTC | 1 cut(s) | 302 |
| XspI | CTAG | 4 cut(s) | 126, 671, 1508, 1797 |
| Zsp2I | ATGCAT | 1 cut(s) | 1525 |