FvH4_1g15620

CDPK-related kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
8860819 .. 8865044
4226 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g15620.t1

Sequence Viewer

Length: 1824 bp
ATGGGTCTCTGCACTTCCAAGCCGGCGTTCCCGCACTCCACCACTTCGTCGCCGCAGTCGGATTCTCAGGTGGGGAAAGATCCGGCCAAGGAAAACAATTCGAGCTCGGCGGATGTGGAAAACCCTAGAAATGAGCACAACGGAGAGGAGAAGCTCGGCGGCGGAGAAGAGGAGACTGTGATCGCCGTCAAGAAGTCGCCGTTTTTTCCGTTCTACAGTCCGAGCCCGGCGCACTACTTCTCCTCGAAGAAGTCTCCGGCGAGATCTCCGGCGAATGCCAGCGCCAAGTCGACGCCGAACCGGTTCTTCAAGCGGCCGTTCCCGCCGCCGTCGCCGGCGAAGCACATACGGGCGCTGCTGGCGCGGCGGCACGGGACGGTGAAGCCGAACGAGGCGATTCCGGAGGGGAGTGAGGTGGAGGGAGGTTTGACTGGGCTTGATAAGAGCTTTGGATTCTCTAAGCATTTGAGTAACAAGTATGAGCTCGGAGAAGAAGTTGGGCGAGGGCATTTTGGGTATACTTGCAAAGCTACGTTTAAGAAGGGAGAGCTCAAGGGGCAGCAGGTTGCTGTCAAAGTCATCCCCAAAGCCAAGATGACTACTGCAATTGCCATTGAGGATGTGAGAAGGGAAGTCAAGATATTGAAGGCTTTGACCGGGCATAGCAATCTAGTGCAATTTTATGATGCCTATGAAGACCATGATAATGTCTACATAGTTATGGAACTCTGCGAGGGAGGGGAGCTCTTAGATAGGATTCTTGCAAGGGGTGGGAAATATACGGAGGAAGATGCAAGGACCGTGATGATACAAATATTGAATGTAGTTGCATTTTGCCACCTCCAGGGGGTGGTCCATCGAGATCTTAAGCCAGAGGATGAAGATTCACAGTTGAAGGCTATAGACTTTGGTCTTTCAGATTTCGTGAAACCAGATGAAAGGCTTAACGACATTGTTGGTAGTGCATACTATGTAGCCCCCGAAGTGTTACATAGGGCTTATGGTACAGAAGCTGATGTCTGGAGTGTGGGTGTGATTGCATACATTCTATTGTGTGGCAGCCGTCCATTTTGGGCTCGAACTGAGTCTGGCATTTTTCGGGCAGTTCTAAAAGCTGATCCAAGTTTTGATGAACCACCTTGGCCAACTCTGTCTACAGAGGCAAGAGATTTTGTCAAGCGCCTATTGAATAAAGACCCACGGAAAAGAATGACAGCTGCACAAGCTTTAAGTCATCCCTGGCTTAAAAATTATAGCACTGTTCAAATTCCTCTGGACATACTAATATTCAAGCTCATGAAGATTTATATGCGTTCATCACCTCTCCGTAAAACTGCTTTAAGGGCTCTTTCCAAGACATTGACTGTTGATGAGCTTTACTATTTGAAGGAGCAGTTTGCCCTATTAGAACCAAACAAAAATGGCACAATAAGCTTAGAAAATATCAAAACGGCCTTGATGAAAAATGCAACTGATGCAATGAAGGAGGCACGAATTGCGGACTTTCTAGCATCGCTTAATGCATTACAGTATAGAAGGATGGATTTTGAGGAATTTTGTACAGCTACACTAAGTGTCCACCAACTTGAGGCTCTGGACCGTTGGGAGCAACATGCTCGTTGTGCATATGAACTTTTCGATAAGGAAGGCAACAGGGCTATTGTCATTGAGGAACTGGCTTCGGAACTTGGTCTTGGCCCTTCCGTCCCTGTTCATGCAGTTCTTCATGATTGGATTAGGCACACCGATGGGAAGCTGAGTTTCCTTGGATTCGTGAAACTGTTGCATGGCGTGTCTAGCCGGGTGGTTGCAAAAGCTCAATGA

Protein Analysis

608

Amino Acids

67.72

Weight (kDa)

8.25

Isoelectric Point (pI)

47.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 160 - 415 1.7e-69 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 161 - 408 8e-32 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 553
AccB7I CCANNNNNTGG 1 cut(s) 850
AccI GTMKAC 4 cut(s) 290, 518, 711, 1154
AccII CGCG 1 cut(s) 364
AccIII TCCGGA 1 cut(s) 400
AclWI GGATC 2 cut(s) 74, 1112
AcoI YGGCCR 3 cut(s) 84, 314, 1142
AcsI RAATTY 2 cut(s) 1266, 1553
AcyI GRCGYC 1 cut(s) 293
AdeI CACNNNGTG 1 cut(s) 1574
AfaI GTAC 2 cut(s) 1006, 1561
AfiI CCNNNNNNNGG 4 cut(s) 844, 847, 850, 1588
AflII CTTAAG 1 cut(s) 866
AgeI ACCGGT 1 cut(s) 300
AgsI TTSAA 8 cut(s) 310, 646, 820, 895, 1189, 1265, 1291, 1387
AjnI CCWGG 2 cut(s) 843, 1238
AjuI GAANNNNNNNTTGG 4 cut(s) 11, 43, 1677, 1709
Alw21I GWGCWC 5 cut(s) 107, 138, 486, 552, 747
Alw26I GTCTC 3 cut(s) 11, 167, 258
AlwI GGATC 2 cut(s) 74, 1112
AlwNI CAGNNNCTG 1 cut(s) 1013
Aor13HI TCCGGA 1 cut(s) 400
AoxI GGCC 5 cut(s) 84, 314, 1142, 1452, 1696
ApeKI GCWGC 4 cut(s) 355, 559, 1059, 1217
ApoI RAATTY 2 cut(s) 1266, 1553
AsiGI ACCGGT 1 cut(s) 300
Asp700I GAANNNNTTC 1 cut(s) 302
AspLEI GCGC 5 cut(s) 232, 284, 355, 364, 1182
AspS9I GGNCC 4 cut(s) 798, 853, 1597, 1697
AsuC2I CCSGG 3 cut(s) 227, 658, 1802
AsuHPI GGTGA 2 cut(s) 391, 1311
AvaII GGWCC 3 cut(s) 798, 853, 1597
BalI TGGCCA 1 cut(s) 1144
BanII GRGCYC 7 cut(s) 107, 227, 486, 552, 747, 1078, 1348
BbsI GAAGAC 1 cut(s) 702
Bbv12I GWGCWC 5 cut(s) 107, 138, 486, 552, 747
BbvI GCAGC 4 cut(s) 342, 571, 1071, 1204
BccI CCATC 3 cut(s) 864, 1534, 1742
BceAI ACGGC 6 cut(s) 170, 184, 301, 313, 1047, 1467
BcgI CGANNNNNNTGC 2 cut(s) 1598, 1632
BciT130I CCWGG 2 cut(s) 845, 1240
BcnI CCSGG 3 cut(s) 227, 658, 1802
BcoDI GTCTC 3 cut(s) 11, 167, 258
BfaI CTAG 4 cut(s) 126, 671, 1508, 1797
BfmI CTRYAG 3 cut(s) 214, 900, 1155
BfoI RGCGCY 3 cut(s) 285, 356, 1183
BfrI CTTAAG 1 cut(s) 866
BfuAI ACCTGC 1 cut(s) 553
BglII AGATCT 2 cut(s) 263, 862
Bme1390I CCNGG 5 cut(s) 227, 658, 845, 1240, 1802
Bme18I GGWCC 3 cut(s) 798, 853, 1597
BmgT120I GGNCC 4 cut(s) 798, 853, 1597, 1697
BmrFI CCNGG 5 cut(s) 227, 658, 845, 1240, 1802
BmrI ACTGGG 1 cut(s) 441
BmsI GCATC 4 cut(s) 676, 781, 1465, 1520
BmuI ACTGGG 1 cut(s) 441
BoxI GACNNNNGTC 1 cut(s) 909
BpiI GAAGAC 1 cut(s) 702
BplI GAGNNNNNCTC 2 cut(s) 729, 761
BpmI CTGGAG 2 cut(s) 827, 1042
BpuEI CTTGAG 2 cut(s) 536, 1607
BpuMI CCSGG 3 cut(s) 227, 658, 1802
BsaHI GRCGYC 1 cut(s) 293
BsaI GGTCTC 1 cut(s) 11
BsaJI CCNNGG 6 cut(s) 87, 844, 1139, 1199, 1238, 1765
BsaWI WCCGGW 2 cut(s) 300, 400
BsaXI ACNNNNNCTCC 6 cut(s) 224, 254, 480, 510, 1015, 1045
Bsc4I CCNNNNNNNGG 4 cut(s) 844, 847, 850, 1588
Bse118I RCCGGY 3 cut(s) 22, 300, 334
Bse1I ACTGG 2 cut(s) 436, 1680
Bse3DI GCAATG 1 cut(s) 1485
BseAI TCCGGA 1 cut(s) 400
BseBI CCWGG 2 cut(s) 845, 1240
BseDI CCNNGG 6 cut(s) 87, 844, 1139, 1199, 1238, 1765
BseGI GGATG 6 cut(s) 118, 579, 625, 883, 1234, 1545
BseLI CCNNNNNNNGG 4 cut(s) 844, 847, 850, 1588
BseMI GCAATG 1 cut(s) 1485
BseMII CTCAG 3 cut(s) 80, 1074, 1748
BseNI ACTGG 2 cut(s) 436, 1680
BseRI GAGGAG 3 cut(s) 161, 185, 232
BseX3I CGGCCG 1 cut(s) 314
BseXI GCAGC 4 cut(s) 342, 571, 1071, 1204
BsgI GTGCAG 1 cut(s) 1203
Bsh1236I CGCG 1 cut(s) 364
Bsh1285I CGRYCG 1 cut(s) 317
BshFI GGCC 5 cut(s) 86, 316, 1144, 1454, 1698
BshTI ACCGGT 1 cut(s) 300
BsiEI CGRYCG 1 cut(s) 317
BsiHKAI GWGCWC 5 cut(s) 107, 138, 486, 552, 747
BslFI GGGAC 2 cut(s) 388, 1691
BslI CCNNNNNNNGG 4 cut(s) 844, 847, 850, 1588
BsmAI GTCTC 3 cut(s) 11, 167, 258
BsmFI GGGAC 2 cut(s) 388, 1691
BsmI GAATGC 1 cut(s) 280
BsnI GGCC 5 cut(s) 86, 316, 1144, 1454, 1698
Bso31I GGTCTC 1 cut(s) 11
Bsp1286I GDGCHC 8 cut(s) 107, 138, 227, 486, 552, 747, 1078, 1348
Bsp13I TCCGGA 1 cut(s) 400
Bsp1407I TGTACA 1 cut(s) 1559
Bsp143I GATC 5 cut(s) 79, 180, 263, 862, 1117
BspANI GGCC 5 cut(s) 86, 316, 1144, 1454, 1698
BspCNI CTCAG 3 cut(s) 79, 1075, 1749
BspEI TCCGGA 1 cut(s) 400
BspFNI CGCG 1 cut(s) 364
BspHI TCATGA 2 cut(s) 1296, 1726
BspMI ACCTGC 1 cut(s) 553
BspPI GGATC 2 cut(s) 74, 1112
BspTI CTTAAG 1 cut(s) 866
BspTNI GGTCTC 1 cut(s) 11
BsrDI GCAATG 1 cut(s) 1485
BsrFI RCCGGY 3 cut(s) 22, 300, 334
BsrGI TGTACA 1 cut(s) 1559
BsrI ACTGG 2 cut(s) 436, 1680
BssAI RCCGGY 3 cut(s) 22, 300, 334
BssECI CCNNGG 6 cut(s) 87, 844, 1139, 1199, 1238, 1765
BssMI GATC 5 cut(s) 79, 180, 263, 862, 1117
BssNAI GTATAC 1 cut(s) 519
BssNI GRCGYC 1 cut(s) 293
BssT1I CCWWGG 3 cut(s) 87, 1139, 1765
Bst1107I GTATAC 1 cut(s) 519
Bst2UI CCWGG 2 cut(s) 845, 1240
Bst6I CTCTTC 1 cut(s) 162
BstACI GRCGYC 1 cut(s) 293
BstAFI CTTAAG 1 cut(s) 866
BstAPI GCANNNNNTGC 2 cut(s) 1475, 1496
BstAUI TGTACA 1 cut(s) 1559
BstC8I GCNNGC 4 cut(s) 24, 280, 336, 360
BstDEI CTNAG 7 cut(s) 66, 459, 748, 1083, 1435, 1571, 1757
BstDSI CCRYGG 1 cut(s) 1199
BstF5I GGATG 6 cut(s) 118, 579, 625, 883, 1234, 1545
BstFNI CGCG 1 cut(s) 364
BstH2I RGCGCY 3 cut(s) 285, 356, 1183
BstHHI GCGC 5 cut(s) 232, 284, 355, 364, 1182
BstKTI GATC 5 cut(s) 82, 183, 266, 865, 1120
BstMAI GTCTC 3 cut(s) 11, 167, 258
BstMBI GATC 5 cut(s) 79, 180, 263, 862, 1117
BstMCI CGRYCG 1 cut(s) 317
BstNI CCWGG 2 cut(s) 845, 1240
BstNSI RCATGY 1 cut(s) 1616
BstPAI GACNNNNGTC 1 cut(s) 909
BstSCI CCNGG 5 cut(s) 225, 656, 843, 1238, 1800
BstSFI CTRYAG 3 cut(s) 214, 900, 1155
BstUI CGCG 1 cut(s) 364
BstV1I GCAGC 4 cut(s) 342, 571, 1071, 1204
BstV2I GAAGAC 1 cut(s) 702
BstX2I RGATCY 3 cut(s) 79, 263, 862
BstYI RGATCY 3 cut(s) 79, 263, 862
BstZ17I GTATAC 1 cut(s) 519
BstZI CGGCCG 1 cut(s) 314
BsuRI GGCC 5 cut(s) 86, 316, 1144, 1454, 1698
BtgI CCRYGG 1 cut(s) 1199
BtgZI GCGATG 1 cut(s) 1497
BtsCI GGATG 6 cut(s) 118, 579, 625, 883, 1234, 1545
BtsIMutI CAGTG 1 cut(s) 1257
BveI ACCTGC 1 cut(s) 553
Cac8I GCNNGC 4 cut(s) 24, 280, 336, 360
CaiI CAGNNNCTG 1 cut(s) 1013
CciI TCATGA 2 cut(s) 1296, 1726
CfoI GCGC 5 cut(s) 232, 284, 355, 364, 1182
Cfr10I RCCGGY 3 cut(s) 22, 300, 334
Cfr13I GGNCC 4 cut(s) 798, 853, 1597, 1697
CseI GACGC 1 cut(s) 301
Csp6I GTAC 2 cut(s) 1005, 1560
CspAI ACCGGT 1 cut(s) 300
CviAII CATG 6 cut(s) 701, 1297, 1613, 1715, 1727, 1787
CviQI GTAC 2 cut(s) 1005, 1560
DdeI CTNAG 7 cut(s) 66, 459, 748, 1083, 1435, 1571, 1757
DpnI GATC 5 cut(s) 81, 182, 265, 864, 1119
DpnII GATC 5 cut(s) 79, 180, 263, 862, 1117
DraIII CACNNNGTG 1 cut(s) 1574
EaeI YGGCCR 3 cut(s) 84, 314, 1142
EagI CGGCCG 1 cut(s) 314
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
EciI GGCGGA 2 cut(s) 125, 177
Ecl136II GAGCTC 4 cut(s) 105, 484, 550, 745
EclXI CGGCCG 1 cut(s) 314
Eco130I CCWWGG 3 cut(s) 87, 1139, 1765
Eco24I GRGCYC 7 cut(s) 107, 227, 486, 552, 747, 1078, 1348
Eco31I GGTCTC 1 cut(s) 11
Eco47I GGWCC 3 cut(s) 798, 853, 1597
Eco52I CGGCCG 1 cut(s) 314
Eco53kI GAGCTC 4 cut(s) 105, 484, 550, 745
EcoICRI GAGCTC 4 cut(s) 105, 484, 550, 745
EcoRII CCWGG 2 cut(s) 843, 1238
EcoT14I CCWWGG 3 cut(s) 87, 1139, 1765
EcoT22I ATGCAT 1 cut(s) 1525
EcoT38I GRGCYC 7 cut(s) 107, 227, 486, 552, 747, 1078, 1348
ErhI CCWWGG 3 cut(s) 87, 1139, 1765
FaeI CATG 6 cut(s) 704, 1300, 1616, 1718, 1730, 1790
FaqI GGGAC 2 cut(s) 388, 1691
FatI CATG 6 cut(s) 700, 1296, 1612, 1714, 1726, 1786
FauI CCCGC 2 cut(s) 39, 330
FauNDI CATATG 1 cut(s) 1627
FblI GTMKAC 4 cut(s) 290, 518, 711, 1154
FokI GGATG 6 cut(s) 125, 566, 632, 890, 1221, 1552
FriOI GRGCYC 7 cut(s) 107, 227, 486, 552, 747, 1078, 1348
FspBI CTAG 4 cut(s) 126, 671, 1508, 1797
GlaI GCGC 5 cut(s) 231, 283, 354, 363, 1181
GsuI CTGGAG 2 cut(s) 827, 1042
HaeII RGCGCY 3 cut(s) 285, 356, 1183
HaeIII GGCC 5 cut(s) 86, 316, 1144, 1454, 1698
HgaI GACGC 1 cut(s) 301
HhaI GCGC 5 cut(s) 232, 284, 355, 364, 1182
Hin1I GRCGYC 1 cut(s) 293
Hin1II CATG 6 cut(s) 704, 1300, 1616, 1718, 1730, 1790
Hin6I GCGC 5 cut(s) 230, 282, 353, 362, 1180
HinP1I GCGC 5 cut(s) 230, 282, 353, 362, 1180
HincII GTYRAC 1 cut(s) 291
HindII GTYRAC 1 cut(s) 291
HindIII AAGCTT 2 cut(s) 1224, 1432
HinfI GANTC 7 cut(s) 62, 397, 453, 757, 884, 1085, 1770
HphI GGTGA 2 cut(s) 391, 1311
Hpy166II GTNNAC 5 cut(s) 291, 519, 712, 1155, 1579
Hpy188I TCNGA 5 cut(s) 61, 222, 488, 919, 1684
Hpy8I GTNNAC 5 cut(s) 291, 519, 712, 1155, 1579
Hpy99I CGWCG 3 cut(s) 52, 295, 334
HpyAV CCTTC 9 cut(s) 535, 621, 640, 889, 1381, 1477, 1530, 1640, 1710
HpyCH4IV ACGT 1 cut(s) 533
HpyF3I CTNAG 7 cut(s) 66, 459, 748, 1083, 1435, 1571, 1757
HpySE526I ACGT 1 cut(s) 533
Hsp92I GRCGYC 1 cut(s) 293
Hsp92II CATG 6 cut(s) 704, 1300, 1616, 1718, 1730, 1790
HspAI GCGC 5 cut(s) 230, 282, 353, 362, 1180
Kpn2I TCCGGA 1 cut(s) 400
KroI GCCGGC 2 cut(s) 22, 334
KroNI GCCGGC 2 cut(s) 24, 336
Kzo9I GATC 5 cut(s) 79, 180, 263, 862, 1117
LmnI GCTCC 3 cut(s) 742, 1390, 1606
Lsp1109I GCAGC 4 cut(s) 342, 571, 1071, 1204
LweI GCATC 4 cut(s) 676, 781, 1465, 1520
MaeI CTAG 4 cut(s) 126, 671, 1508, 1797
MaeII ACGT 1 cut(s) 533
MaeIII GTNAC 2 cut(s) 470, 987
MalI GATC 5 cut(s) 81, 182, 265, 864, 1119
MboI GATC 5 cut(s) 79, 180, 263, 862, 1117
MboII GAAGA 9 cut(s) 179, 259, 298, 503, 707, 800, 893, 1312, 1715
MfeI CAATTG 1 cut(s) 606
MflI RGATCY 3 cut(s) 79, 263, 862
MhlI GDGCHC 8 cut(s) 107, 138, 227, 486, 552, 747, 1078, 1348
MlsI TGGCCA 1 cut(s) 1144
MluCI AATT 7 cut(s) 97, 606, 677, 1249, 1266, 1494, 1553
MluNI TGGCCA 1 cut(s) 1144
MlyI GAGTC 1 cut(s) 1094
MmeI TCCRAC 1 cut(s) 39
Mox20I TGGCCA 1 cut(s) 1144
Mph1103I ATGCAT 1 cut(s) 1525
MreI CGCCGGCG 1 cut(s) 334
MroI TCCGGA 1 cut(s) 400
MroNI GCCGGC 2 cut(s) 22, 334
MroXI GAANNNNTTC 1 cut(s) 302
MscI TGGCCA 1 cut(s) 1144
MseI TTAA 7 cut(s) 537, 867, 945, 1229, 1245, 1340, 1518
MslI CAYNNNNRTG 3 cut(s) 705, 719, 1746
Msp20I TGGCCA 1 cut(s) 1144
MspA1I CMGCKG 1 cut(s) 1217
MspCI CTTAAG 1 cut(s) 866
MspR9I CCNGG 5 cut(s) 227, 658, 845, 1240, 1802
MunI CAATTG 1 cut(s) 606
Mva1269I GAATGC 1 cut(s) 280
MvaI CCWGG 2 cut(s) 845, 1240
MvnI CGCG 1 cut(s) 364
NaeI GCCGGC 2 cut(s) 24, 336
NciI CCSGG 3 cut(s) 227, 658, 1802
NdeI CATATG 1 cut(s) 1627
NdeII GATC 5 cut(s) 79, 180, 263, 862, 1117
NgoMIV GCCGGC 2 cut(s) 22, 334
NlaIII CATG 6 cut(s) 704, 1300, 1616, 1718, 1730, 1790
NmeAIII GCCGAG 2 cut(s) 86, 135
NsiI ATGCAT 1 cut(s) 1525
NspI RCATGY 1 cut(s) 1616
PagI TCATGA 2 cut(s) 1296, 1726
PcsI WCGNNNNNNNCGW 1 cut(s) 383
PctI GAATGC 1 cut(s) 280
PdiI GCCGGC 2 cut(s) 24, 336
PdmI GAANNNNTTC 1 cut(s) 302
PfeI GAWTC 6 cut(s) 62, 397, 453, 757, 884, 1770
PflMI CCANNNNNTGG 1 cut(s) 850
PinAI ACCGGT 1 cut(s) 300
PleI GAGTC 1 cut(s) 1093
PpsI GAGTC 1 cut(s) 1093
PshAI GACNNNNGTC 1 cut(s) 909
Psp124BI GAGCTC 4 cut(s) 107, 486, 552, 747
Psp6I CCWGG 2 cut(s) 843, 1238
PspGI CCWGG 2 cut(s) 843, 1238
PspPI GGNCC 4 cut(s) 798, 853, 1597, 1697
PstNI CAGNNNCTG 1 cut(s) 1013
PsuI RGATCY 3 cut(s) 79, 263, 862
PvuII CAGCTG 1 cut(s) 1217
RsaI GTAC 2 cut(s) 1006, 1561
RsaNI GTAC 2 cut(s) 1005, 1560
RseI CAYNNNNRTG 3 cut(s) 705, 719, 1746
SacI GAGCTC 4 cut(s) 107, 486, 552, 747
SalI GTCGAC 1 cut(s) 289
SaqAI TTAA 7 cut(s) 537, 867, 945, 1229, 1245, 1340, 1518
Sau3AI GATC 5 cut(s) 79, 180, 263, 862, 1117
Sau96I GGNCC 4 cut(s) 798, 853, 1597, 1697
SchI GAGTC 1 cut(s) 1094
ScrFI CCNGG 5 cut(s) 227, 658, 845, 1240, 1802
SduI GDGCHC 8 cut(s) 107, 138, 227, 486, 552, 747, 1078, 1348
SfaNI GCATC 4 cut(s) 676, 781, 1465, 1520
SfcI CTRYAG 3 cut(s) 214, 900, 1155
SgrAI CRCCGGYG 1 cut(s) 334
SinI GGWCC 3 cut(s) 798, 853, 1597
SmiMI CAYNNNNRTG 3 cut(s) 705, 719, 1746
SmlI CTYRAG 3 cut(s) 551, 866, 1586
SmoI CTYRAG 3 cut(s) 551, 866, 1586
Sse9I AATT 7 cut(s) 97, 606, 677, 1249, 1266, 1494, 1553
SspI AATATT 2 cut(s) 816, 1287
SspMI CTAG 4 cut(s) 126, 671, 1508, 1797
SstI GAGCTC 4 cut(s) 107, 486, 552, 747
StyD4I CCNGG 5 cut(s) 225, 656, 843, 1238, 1800
StyI CCWWGG 3 cut(s) 87, 1139, 1765
TaiI ACGT 1 cut(s) 536
TaqI TCGA 6 cut(s) 101, 245, 290, 859, 1078, 1638
TasI AATT 7 cut(s) 97, 606, 677, 1249, 1266, 1494, 1553
TatI WGTACW 1 cut(s) 1559
TauI GCSGC 6 cut(s) 55, 162, 316, 328, 367, 370
TfiI GAWTC 6 cut(s) 62, 397, 453, 757, 884, 1770
Tru1I TTAA 7 cut(s) 537, 867, 945, 1229, 1245, 1340, 1518
Tru9I TTAA 7 cut(s) 537, 867, 945, 1229, 1245, 1340, 1518
TscAI CASTG 1 cut(s) 1264
TseI GCWGC 4 cut(s) 355, 559, 1059, 1217
TspGWI ACGGA 6 cut(s) 156, 198, 797, 1216, 1316, 1693
TspRI CASTG 1 cut(s) 1264
Van91I CCANNNNNTGG 1 cut(s) 850
Vha464I CTTAAG 1 cut(s) 866
VpaK11BI GGWCC 3 cut(s) 798, 853, 1597
XapI RAATTY 2 cut(s) 1266, 1553
XceI RCATGY 1 cut(s) 1616
XmiI GTMKAC 4 cut(s) 290, 518, 711, 1154
XmnI GAANNNNTTC 1 cut(s) 302
XspI CTAG 4 cut(s) 126, 671, 1508, 1797
Zsp2I ATGCAT 1 cut(s) 1525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.