AT3G53160

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
19702332 .. 19703976
1645 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G53160.1

Sequence Viewer

Length: 1473 bp
ATGTGTTCTCATGATCCTCTTCACTTCGTCGTAATACCCTTTATGGCCCAAGGCCATATGATCCCATTGGTCGACATCTCTAGGCTCTTGTCCCAGCGCCAAGGCGTGACTGTCTGCATCATCACAACTACTCAAAATGTAGCCAAGATCAAGACTTCACTCTCATTTTCCTCTTTGTTTGCGACTATCAACATCGTTGAAGTTAAGTTTCTGTCTCAACAAACGGGTTTGCCAGAAGGGTGCGAGAGTTTAGATATGTTGGCTTCAATGGGCGATATGGTGAAGTTCTTTGATGCTGCCAACTCACTTGAGGAGCAAGTTGAGAAAGCTATGGAAGAGATGGTTCAGCCGCGGCCAAGCTGCATCATTGGAGACATGAGCCTTCCTTTCACTTCAAGACTTGCCAAGAAATTCAAGATCCCCAAACTTATCTTCCATGGGTTTTCTTGTTTCAGCCTCATGTCTATACAAGTGGTTCGAGAAAGCGGGATCTTGAAAATGATAGAATCAAACGACGAGTATTTTGATTTGCCCGGCTTGCCTGACAAAGTTGAGTTCACGAAACCTCAGGTCTCTGTGTTGCAACCTGTTGAAGGAAATATGAAAGAGAGTACGGCCAAGATTATTGAAGCTGATAATGACTCTTATGGTGTTATTGTGAACACTTTTGAAGAGTTAGAGGTTGATTATGCAAGAGAATATAGGAAAGCAAGGGCTGGAAAAGTTTGGTGCGTTGGACCTGTTTCCTTGTGCAATAGGTTAGGGTTAGACAAAGCTAAAAGAGGAGATAAGGCTTCTATTGGTCAAGACCAATGTCTTCAATGGCTTGACTCTCAAGAAACTGGTTCAGTGCTCTACGTTTGCCTTGGAAGTCTATGTAATCTTCCCTTGGCTCAGCTCAAAGAGCTGGGACTAGGCCTTGAGGCATCTAATAAACCTTTCATATGGGTTATAAGAGAATGGGGAAAATATGGAGATTTAGCAAATTGGATGCAACAAAGCGGATTTGAAGAGCGGATCAAAGATAGAGGACTGGTGATCAAAGGTTGGGCGCCGCAAGTTTTCATCCTCTCACACGCATCCATTGGAGGGTTTTTGACTCACTGTGGATGGAACTCGACACTAGAAGGAATTACTGCAGGAGTTCCATTATTGACATGGCCTTTGTTTGCTGAACAATTCTTGAATGAGAAGTTAGTTGTGCAGATACTAAAAGCAGGGTTAAAGATAGGAGTAGAGAAATTGATGAAATATGGAAAAGAAGAGGAGATAGGAGCGATGGTGAGCAGAGAATGTGTGAGAAAAGCTGTGGATGAGCTAATGGGTGATAGTGAAGAAGCAGAAGAGAGAAGAAGAAAAGTTACAGAACTTAGTGACTTGGCAAATAAGGCTTTGGAAAAAGGAGGATCTTCAGATTCTAATATCACATTGCTCATTCAAGATATTATGGAGCAATCACAAAATCAATTTTAA

Protein Analysis

490

Amino Acids

54.57

Weight (kDa)

5.25

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 9 - 248 7.3e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 279 - 421 1.3e-17 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 953
AccB1I GGYRCC 1 cut(s) 1051
AccBSI CCGCTC 1 cut(s) 1015
AccI GTMKAC 1 cut(s) 72
AccII CGCG 1 cut(s) 352
AciI CCGC 6 cut(s) 350, 352, 486, 1002, 1015, 1055
AclWI GGATC 6 cut(s) 8, 55, 412, 497, 1025, 1414
AcoI YGGCCR 2 cut(s) 353, 615
AcsI RAATTY 1 cut(s) 410
AcuI CTGAAG 1 cut(s) 1395
AcyI GRCGYC 1 cut(s) 1052
AfaI GTAC 1 cut(s) 613
AfiI CCNNNNNNNGG 2 cut(s) 593, 1089
AjuI GAANNNNNNNTTGG 2 cut(s) 416, 448
AluBI AGCT 8 cut(s) 329, 360, 632, 776, 898, 907, 1307, 1318
AluI AGCT 8 cut(s) 329, 360, 632, 776, 898, 907, 1307, 1318
Alw21I GWGCWC 1 cut(s) 855
Alw26I GTCTC 3 cut(s) 219, 366, 577
AlwI GGATC 6 cut(s) 8, 55, 412, 497, 1025, 1414
AoxI GGCC 6 cut(s) 45, 52, 353, 615, 916, 1160
ApeKI GCWGC 2 cut(s) 296, 360
ApoI RAATTY 1 cut(s) 410
ArsI GACNNNNNNTTYG 4 cut(s) 506, 538, 1147, 1179
AspLEI GCGC 2 cut(s) 99, 1054
AspS9I GGNCC 2 cut(s) 46, 737
AsuC2I CCSGG 1 cut(s) 534
AsuHPI GGTGA 4 cut(s) 292, 1048, 1294, 1337
AvaII GGWCC 1 cut(s) 737
AxyI CCTNAGG 1 cut(s) 567
BanI GGYRCC 1 cut(s) 1051
BarI GAAGNNNNNNTAC 2 cut(s) 1345, 1377
BbsI GAAGAC 1 cut(s) 809
Bbv12I GWGCWC 1 cut(s) 855
BbvI GCAGC 2 cut(s) 283, 347
BccI CCATC 3 cut(s) 334, 1104, 1273
BceAI ACGGC 1 cut(s) 630
BclI TGATCA 1 cut(s) 1038
BcnI CCSGG 1 cut(s) 534
BcoDI GTCTC 3 cut(s) 219, 366, 577
BfaI CTAG 3 cut(s) 81, 914, 1124
BfmI CTRYAG 1 cut(s) 1137
BfoI RGCGCY 2 cut(s) 100, 1055
BisI GCNGC 5 cut(s) 297, 350, 353, 361, 1055
BlpI GCTNAGC 1 cut(s) 894
BlsI GCNGC 5 cut(s) 298, 351, 354, 362, 1056
Bme1390I CCNGG 1 cut(s) 534
Bme18I GGWCC 1 cut(s) 737
BmgT120I GGNCC 2 cut(s) 46, 737
BmiI GGNNCC 1 cut(s) 1053
BmrFI CCNGG 1 cut(s) 534
BmsI GCATC 6 cut(s) 126, 283, 372, 935, 981, 1088
BoxI GACNNNNGTC 1 cut(s) 813
BpiI GAAGAC 1 cut(s) 809
Bpu1102I GCTNAGC 1 cut(s) 894
BpuEI CTTGAG 3 cut(s) 329, 819, 941
BpuMI CCSGG 1 cut(s) 534
BsaHI GRCGYC 1 cut(s) 1052
BsaI GGTCTC 1 cut(s) 577
BsaJI CCNNGG 6 cut(s) 49, 100, 350, 436, 865, 888
BsaXI ACNNNNNCTCC 2 cut(s) 1266, 1296
Bsc4I CCNNNNNNNGG 2 cut(s) 593, 1089
Bse1I ACTGG 2 cut(s) 847, 1038
Bse21I CCTNAGG 1 cut(s) 567
Bse3DI GCAATG 1 cut(s) 1427
BseDI CCNNGG 6 cut(s) 49, 100, 350, 436, 865, 888
BseGI GGATG 5 cut(s) 996, 1065, 1079, 1115, 1318
BseLI CCNNNNNNNGG 2 cut(s) 593, 1089
BseMI GCAATG 1 cut(s) 1427
BseMII CTCAG 2 cut(s) 581, 908
BseNI ACTGG 2 cut(s) 847, 1038
BseRI GAGGAG 3 cut(s) 326, 798, 1280
BseXI GCAGC 2 cut(s) 283, 347
BseYI CCCAGC 2 cut(s) 93, 907
BsgI GTGCAG 1 cut(s) 1223
Bsh1236I CGCG 1 cut(s) 352
BshFI GGCC 6 cut(s) 47, 54, 355, 617, 918, 1162
BshNI GGYRCC 1 cut(s) 1051
BsiHKAI GWGCWC 1 cut(s) 855
BsiSI CCGG 1 cut(s) 534
BslFI GGGAC 2 cut(s) 76, 924
BslI CCNNNNNNNGG 2 cut(s) 593, 1089
BsmAI GTCTC 3 cut(s) 219, 366, 577
BsmFI GGGAC 2 cut(s) 76, 924
BsnI GGCC 6 cut(s) 47, 54, 355, 617, 918, 1162
Bso31I GGTCTC 1 cut(s) 577
Bsp1286I GDGCHC 1 cut(s) 855
Bsp143I GATC 8 cut(s) 13, 60, 147, 417, 489, 1017, 1038, 1406
Bsp1720I GCTNAGC 1 cut(s) 894
Bsp19I CCATGG 1 cut(s) 436
BspACI CCGC 6 cut(s) 350, 352, 486, 1002, 1015, 1055
BspANI GGCC 6 cut(s) 47, 54, 355, 617, 918, 1162
BspCNI CTCAG 2 cut(s) 580, 907
BspFNI CGCG 1 cut(s) 352
BspHI TCATGA 1 cut(s) 10
BspLI GGNNCC 1 cut(s) 1053
BspMAI CTGCAG 1 cut(s) 1141
BspPI GGATC 6 cut(s) 8, 55, 412, 497, 1025, 1414
BspQI GCTCTTC 1 cut(s) 1005
BspT107I GGYRCC 1 cut(s) 1051
BspTNI GGTCTC 1 cut(s) 577
BsrBI CCGCTC 1 cut(s) 1015
BsrDI GCAATG 1 cut(s) 1427
BsrI ACTGG 2 cut(s) 847, 1038
BssECI CCNNGG 6 cut(s) 49, 100, 350, 436, 865, 888
BssMI GATC 8 cut(s) 13, 60, 147, 417, 489, 1017, 1038, 1406
BssNI GRCGYC 1 cut(s) 1052
BssT1I CCWWGG 5 cut(s) 49, 100, 436, 865, 888
Bst4CI ACNGT 2 cut(s) 112, 1106
Bst6I CTCTTC 6 cut(s) 24, 330, 666, 1005, 1257, 1338
BstACI GRCGYC 1 cut(s) 1052
BstC8I GCNNGC 1 cut(s) 539
BstDEI CTNAG 3 cut(s) 567, 894, 1370
BstDSI CCRYGG 2 cut(s) 350, 436
BstENI CCTNNNNNAGG 1 cut(s) 591
BstF5I GGATG 5 cut(s) 996, 1065, 1079, 1115, 1318
BstFNI CGCG 1 cut(s) 352
BstH2I RGCGCY 2 cut(s) 100, 1055
BstHHI GCGC 2 cut(s) 99, 1054
BstKTI GATC 8 cut(s) 16, 63, 150, 420, 492, 1020, 1041, 1409
BstMAI GTCTC 3 cut(s) 219, 366, 577
BstMBI GATC 8 cut(s) 13, 60, 147, 417, 489, 1017, 1038, 1406
BstMWI GCNNNNNNNGC 3 cut(s) 538, 904, 1388
BstPAI GACNNNNGTC 1 cut(s) 813
BstSCI CCNGG 1 cut(s) 532
BstSFI CTRYAG 1 cut(s) 1137
BstUI CGCG 1 cut(s) 352
BstV1I GCAGC 2 cut(s) 283, 347
BstV2I GAAGAC 1 cut(s) 809
BstX2I RGATCY 3 cut(s) 417, 489, 1406
BstYI RGATCY 3 cut(s) 417, 489, 1406
Bsu36I CCTNAGG 1 cut(s) 567
BsuRI GGCC 6 cut(s) 47, 54, 355, 617, 918, 1162
BtgI CCRYGG 2 cut(s) 350, 436
BtgZI GCGATG 1 cut(s) 1292
BtsCI GGATG 5 cut(s) 996, 1065, 1079, 1115, 1318
BtsIMutI CAGTG 2 cut(s) 855, 1102
Cac8I GCNNGC 1 cut(s) 539
CciI TCATGA 1 cut(s) 10
CfoI GCGC 2 cut(s) 99, 1054
Cfr13I GGNCC 2 cut(s) 46, 737
Cfr42I CCGCGG 1 cut(s) 353
Csp6I GTAC 1 cut(s) 612
CviAII CATG 5 cut(s) 11, 376, 437, 460, 1158
CviQI GTAC 1 cut(s) 612
DdeI CTNAG 3 cut(s) 567, 894, 1370
DinI GGCGCC 1 cut(s) 1053
DpnI GATC 8 cut(s) 15, 62, 149, 419, 491, 1019, 1040, 1408
DpnII GATC 8 cut(s) 13, 60, 147, 417, 489, 1017, 1038, 1406
EaeI YGGCCR 2 cut(s) 353, 615
Eam1104I CTCTTC 6 cut(s) 24, 330, 666, 1005, 1257, 1338
EarI CTCTTC 6 cut(s) 24, 330, 666, 1005, 1257, 1338
Eco130I CCWWGG 5 cut(s) 49, 100, 436, 865, 888
Eco147I AGGCCT 1 cut(s) 918
Eco31I GGTCTC 1 cut(s) 577
Eco47I GGWCC 1 cut(s) 737
Eco57I CTGAAG 1 cut(s) 1395
Eco81I CCTNAGG 1 cut(s) 567
EcoNI CCTNNNNNAGG 1 cut(s) 591
EcoT14I CCWWGG 5 cut(s) 49, 100, 436, 865, 888
EgeI GGCGCC 1 cut(s) 1053
EheI GGCGCC 1 cut(s) 1053
ErhI CCWWGG 5 cut(s) 49, 100, 436, 865, 888
FaeI CATG 5 cut(s) 14, 379, 440, 463, 1161
FaqI GGGAC 2 cut(s) 76, 924
FatI CATG 5 cut(s) 10, 375, 436, 459, 1157
FauI CCCGC 1 cut(s) 479
FauNDI CATATG 2 cut(s) 57, 944
FbaI TGATCA 1 cut(s) 1038
FblI GTMKAC 1 cut(s) 72
Fnu4HI GCNGC 5 cut(s) 297, 350, 353, 361, 1055
FokI GGATG 5 cut(s) 1003, 1052, 1066, 1122, 1325
Fsp4HI GCNGC 5 cut(s) 297, 350, 353, 361, 1055
FspBI CTAG 3 cut(s) 81, 914, 1124
GlaI GCGC 2 cut(s) 98, 1053
GluI GCNGC 5 cut(s) 297, 350, 353, 361, 1055
GsaI CCCAGC 2 cut(s) 97, 911
HaeII RGCGCY 2 cut(s) 100, 1055
HaeIII GGCC 6 cut(s) 47, 54, 355, 617, 918, 1162
HapII CCGG 1 cut(s) 534
HhaI GCGC 2 cut(s) 99, 1054
Hin1I GRCGYC 1 cut(s) 1052
Hin1II CATG 5 cut(s) 14, 379, 440, 463, 1161
Hin6I GCGC 2 cut(s) 97, 1052
HinP1I GCGC 2 cut(s) 97, 1052
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HinfI GANTC 5 cut(s) 506, 641, 830, 1099, 1415
HpaII CCGG 1 cut(s) 534
HphI GGTGA 4 cut(s) 292, 1048, 1294, 1337
Hpy166II GTNNAC 3 cut(s) 73, 558, 661
Hpy188I TCNGA 1 cut(s) 1414
Hpy8I GTNNAC 3 cut(s) 73, 558, 661
Hpy99I CGWCG 2 cut(s) 32, 518
HpyAV CCTTC 4 cut(s) 230, 392, 587, 1121
HpyCH4III ACNGT 2 cut(s) 112, 1106
HpyCH4IV ACGT 1 cut(s) 858
HpyCH4V TGCA 8 cut(s) 117, 363, 583, 692, 753, 994, 1139, 1204
HpyF10VI GCNNNNNNNGC 3 cut(s) 538, 904, 1388
HpyF3I CTNAG 3 cut(s) 567, 894, 1370
HpySE526I ACGT 1 cut(s) 858
Hsp92I GRCGYC 1 cut(s) 1052
Hsp92II CATG 5 cut(s) 14, 379, 440, 463, 1161
HspAI GCGC 2 cut(s) 97, 1052
KasI GGCGCC 1 cut(s) 1051
Ksp22I TGATCA 1 cut(s) 1038
KspI CCGCGG 1 cut(s) 353
Kzo9I GATC 8 cut(s) 13, 60, 147, 417, 489, 1017, 1038, 1406
LguI GCTCTTC 1 cut(s) 1005
LmnI GCTCC 3 cut(s) 313, 1274, 1450
Lsp1109I GCAGC 2 cut(s) 283, 347
LweI GCATC 6 cut(s) 126, 283, 372, 935, 981, 1088
MaeI CTAG 3 cut(s) 81, 914, 1124
MaeII ACGT 1 cut(s) 858
MaeIII GTNAC 3 cut(s) 106, 1360, 1373
MalI GATC 8 cut(s) 15, 62, 149, 419, 491, 1019, 1040, 1408
MbiI CCGCTC 1 cut(s) 1015
MboI GATC 8 cut(s) 13, 60, 147, 417, 489, 1017, 1038, 1406
MflI RGATCY 3 cut(s) 417, 489, 1406
MhlI GDGCHC 1 cut(s) 855
MluCI AATT 6 cut(s) 410, 985, 1131, 1178, 1241, 1466
Mly113I GGCGCC 1 cut(s) 1052
MlyI GAGTC 3 cut(s) 635, 824, 1093
MmeI TCCRAC 1 cut(s) 715
MseI TTAA 3 cut(s) 204, 1223, 1471
MspA1I CMGCKG 1 cut(s) 352
MspI CCGG 1 cut(s) 534
MspR9I CCNGG 1 cut(s) 534
MvnI CGCG 1 cut(s) 352
MwoI GCNNNNNNNGC 3 cut(s) 538, 904, 1388
NarI GGCGCC 1 cut(s) 1052
NciI CCSGG 1 cut(s) 534
NcoI CCATGG 1 cut(s) 436
NdeI CATATG 2 cut(s) 57, 944
NdeII GATC 8 cut(s) 13, 60, 147, 417, 489, 1017, 1038, 1406
NlaIII CATG 5 cut(s) 14, 379, 440, 463, 1161
NlaIV GGNNCC 1 cut(s) 1053
NmuCI GTSAC 2 cut(s) 106, 1373
PagI TCATGA 1 cut(s) 10
PceI AGGCCT 1 cut(s) 918
PciSI GCTCTTC 1 cut(s) 1005
PfeI GAWTC 2 cut(s) 506, 1415
PkrI GCNGC 5 cut(s) 298, 351, 354, 362, 1056
PleI GAGTC 3 cut(s) 635, 824, 1093
PluTI GGCGCC 1 cut(s) 1055
PpsI GAGTC 3 cut(s) 635, 824, 1093
PshAI GACNNNNGTC 1 cut(s) 813
PsiI TTATAA 1 cut(s) 953
PspFI CCCAGC 2 cut(s) 93, 907
PspN4I GGNNCC 1 cut(s) 1053
PspPI GGNCC 2 cut(s) 46, 737
PstI CTGCAG 1 cut(s) 1141
PsuI RGATCY 3 cut(s) 417, 489, 1406
RsaI GTAC 1 cut(s) 613
RsaNI GTAC 1 cut(s) 612
SacII CCGCGG 1 cut(s) 353
SalI GTCGAC 1 cut(s) 71
SapI GCTCTTC 1 cut(s) 1005
SaqAI TTAA 3 cut(s) 204, 1223, 1471
SatI GCNGC 5 cut(s) 297, 350, 353, 361, 1055
Sau3AI GATC 8 cut(s) 13, 60, 147, 417, 489, 1017, 1038, 1406
Sau96I GGNCC 2 cut(s) 46, 737
SchI GAGTC 3 cut(s) 635, 824, 1093
ScrFI CCNGG 1 cut(s) 534
SduI GDGCHC 1 cut(s) 855
SfaNI GCATC 6 cut(s) 126, 283, 372, 935, 981, 1088
SfcI CTRYAG 1 cut(s) 1137
SfoI GGCGCC 1 cut(s) 1053
Sfr303I CCGCGG 1 cut(s) 353
SgrBI CCGCGG 1 cut(s) 353
SinI GGWCC 1 cut(s) 737
SmlI CTYRAG 3 cut(s) 308, 834, 920
SmoI CTYRAG 3 cut(s) 308, 834, 920
Sse9I AATT 6 cut(s) 410, 985, 1131, 1178, 1241, 1466
SseBI AGGCCT 1 cut(s) 918
SsiI CCGC 6 cut(s) 350, 352, 486, 1002, 1015, 1055
SspDI GGCGCC 1 cut(s) 1051
SspMI CTAG 3 cut(s) 81, 914, 1124
StuI AGGCCT 1 cut(s) 918
StyD4I CCNGG 1 cut(s) 532
StyI CCWWGG 5 cut(s) 49, 100, 436, 865, 888
TaaI ACNGT 2 cut(s) 112, 1106
TaiI ACGT 1 cut(s) 861
TaqI TCGA 3 cut(s) 72, 478, 1118
TasI AATT 6 cut(s) 410, 985, 1131, 1178, 1241, 1466
TauI GCSGC 3 cut(s) 352, 355, 1057
TfiI GAWTC 2 cut(s) 506, 1415
Tru1I TTAA 3 cut(s) 204, 1223, 1471
Tru9I TTAA 3 cut(s) 204, 1223, 1471
TscAI CASTG 2 cut(s) 855, 1109
TseFI GTSAC 2 cut(s) 106, 1373
TseI GCWGC 2 cut(s) 296, 360
Tsp45I GTSAC 2 cut(s) 106, 1373
TspDTI ATGAA 4 cut(s) 617, 931, 1054, 1262
TspRI CASTG 2 cut(s) 855, 1109
VpaK11BI GGWCC 1 cut(s) 737
XagI CCTNNNNNAGG 1 cut(s) 591
XapI RAATTY 1 cut(s) 410
XcmI CCANNNNNNNNNTGG 1 cut(s) 1155
XmiI GTMKAC 1 cut(s) 72
XspI CTAG 3 cut(s) 81, 914, 1124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.