pycom12g10300

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
12265498 .. 12266959
1462 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g10300.2

Sequence Viewer

Length: 1371 bp
ATGGCGTCCGGAGAGCCCCAGCTTCACTTTGTCATGTTTCCTTTCATGGCCCCAGGCCACATGATACCGATGATCGATCATCGCCAGACTCTTGGCGCAAAGAGGGTAGCCCTACTAGAATTTCCATGCGAAGAAGCGGGGTTTCCTGCTGGGTGTGAGAACATGGACCTGCTTCCTTCGTATGGATTGGCGGCGCAGTTCTATTTTGCAACGGGTCTGTTGCAACAGCCAGCAGAGAAGTTGTTTGAAGAGCTAACCCCCGAGCCAAGCTGCATATTCTCCGATACGTGTTTTCCGTGGACAGTGAAAATTGCCCACAAGTTTAACATTCCAAGGATATCTTTCTGTGGATTCAGCACATTTTGTCTCCTTTGCAGGAACAAAATTCAGGCGTCGAAAGTTCTTGAGAATTTAAGCTCTGAAACGGAGTACTTTGTTGTGCCTGACTTGCCTGATCGAATTGAGGCCACGAAAGCTCAGCTGCCAAGCGGGACTCCAAGTATGTCCGGGTTTTTTGACAAAATTGCTGCAGCTGAATTGGAAAGATTTGGGATAATCCAGAATACTTTCGAAGAGTTGGAGCCAGCATATATTGAAGCGTACAAGAAGACGGCAAAAGTCTGGTGCATTGGCCCAGCTTCACTGTGCAACAAAGATGACTTGGACAAGGTGCAGAGGGGTAACAAGGCCTCCATTGATGAACAGCACAGCTTGAAGTGGCTTGATTCTTGGGAACCGAGTTCTGTAGTTTATGCTTGCCTTGGAAGTTTATGCAATCTTGTGTGTGAACAATTGATAGAGCTTGGACTGGCCTTAGAGGCATCGAACAAACCGTTCATTTGGGTTGTAAGGGGATGCAGTCAATCAGAAGCGTTGGAAAAGTGGATTTTCGAGAGTGGATTCGAAGAAAGAACGCAAGGAAGGAGCCTCTTTATTCGGGGATGGGCTCCGCAAACACTCATATTGTCACACCGTGCAGTTGGGGGGTTTTTAACGCATTGTGGATGGAACTCGACATTGGAAGGGATATGTGCCGGGCTGCCCTTGATCACATGGCCACTGTTTGGGGACCAGTTCCTTAATGAAAAACTAGTTGTGCAGGTTCTTAAAATTGCGGTGAGCGTTGGGGTGGAGTATCCCGTAAAGTGGGGAGAGGAAGAGAAGATTGGCGTGCTGGTGAAAAGGGAAAATGTAACAAAAGCGATAGAGGAGGTGATGGATGGAGAAGAAAGTGAAGGGAGAAGAGAGAGAGCCAGAGAGTTTGGAGAGATGGCAAAGAGGGCAGTAGAAGGAGGATCGTCTCACGTCAACGTTACACAGCTTATCCAAGATATCATGCAACGAGGTGGTAATGGCAGACATACAAACTAA

Protein Analysis

457

Amino Acids

50.89

Weight (kDa)

5.23

Isoelectric Point (pI)

46.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 177, 1090
AccB7I CCANNNNNTGG 1 cut(s) 1064
AccIII TCCGGA 1 cut(s) 8
AciI CCGC 5 cut(s) 137, 191, 489, 950, 1115
AclI AACGTT 1 cut(s) 1311
AclWI GGATC 1 cut(s) 1303
AcoI YGGCCR 1 cut(s) 1055
AcsI RAATTY 3 cut(s) 119, 384, 409
AcyI GRCGYC 2 cut(s) 5, 392
AdeI CACNNNGTG 1 cut(s) 974
AfaI GTAC 2 cut(s) 431, 602
AfiI CCNNNNNNNGG 3 cut(s) 182, 1064, 1146
AflIII ACRYGT 1 cut(s) 287
AgsI TTSAA 3 cut(s) 248, 596, 715
AhlI ACTAGT 1 cut(s) 1090
AjiI CACGTC 1 cut(s) 1306
AjnI CCWGG 1 cut(s) 52
AjuI GAANNNNNNNTTGG 4 cut(s) 1001, 1033, 1149, 1181
Alw26I GTCTC 2 cut(s) 371, 1305
AlwI GGATC 1 cut(s) 1303
Ama87I CYCGRG 1 cut(s) 260
Aor13HI TCCGGA 1 cut(s) 8
AoxI GGCC 7 cut(s) 48, 55, 465, 631, 687, 810, 1055
ApeKI GCWGC 5 cut(s) 270, 481, 527, 530, 1039
ApoI RAATTY 3 cut(s) 119, 384, 409
Asp700I GAANNNNTTC 1 cut(s) 566
AspLEI GCGC 2 cut(s) 98, 196
AspS9I GGNCC 4 cut(s) 49, 166, 632, 1069
AsuC2I CCSGG 2 cut(s) 508, 1036
AsuHPI GGTGA 3 cut(s) 1129, 1189, 1225
AsuII TTCGAA 2 cut(s) 570, 903
AvaI CYCGRG 1 cut(s) 260
AvaII GGWCC 2 cut(s) 166, 1069
BalI TGGCCA 1 cut(s) 1057
BanII GRGCYC 2 cut(s) 18, 949
BbsI GAAGAC 1 cut(s) 614
BbvI GCAGC 5 cut(s) 257, 468, 514, 542, 1026
BccI CCATC 5 cut(s) 936, 999, 1210, 1214, 1264
BceAI ACGGC 1 cut(s) 627
BciT130I CCWGG 1 cut(s) 54
BciVI GTATCC 1 cut(s) 1146
BclI TGATCA 1 cut(s) 1047
BcnI CCSGG 2 cut(s) 508, 1036
BcoDI GTCTC 2 cut(s) 371, 1305
BcuI ACTAGT 1 cut(s) 1090
BfaI CTAG 2 cut(s) 116, 1091
BfmI CTRYAG 2 cut(s) 528, 744
BfuAI ACCTGC 2 cut(s) 177, 1090
BfuI GTATCC 1 cut(s) 1146
BglI GCCNNNNNGGC 1 cut(s) 818
BisI GCNGC 6 cut(s) 192, 271, 482, 528, 531, 1040
BlpI GCTNAGC 1 cut(s) 477
BlsI GCNGC 6 cut(s) 193, 272, 483, 529, 532, 1041
BmcAI AGTACT 1 cut(s) 431
Bme1390I CCNGG 3 cut(s) 54, 508, 1036
Bme18I GGWCC 2 cut(s) 166, 1069
BmeT110I CYCGRG 1 cut(s) 260
BmgBI CACGTC 1 cut(s) 1306
BmgT120I GGNCC 4 cut(s) 49, 166, 632, 1069
BmiI GGNNCC 6 cut(s) 51, 582, 735, 926, 948, 1070
BmrFI CCNGG 3 cut(s) 54, 508, 1036
BmsI GCATC 2 cut(s) 830, 845
BpiI GAAGAC 1 cut(s) 614
Bpu1102I GCTNAGC 1 cut(s) 477
Bpu14I TTCGAA 2 cut(s) 570, 903
BpuEI CTTGAG 1 cut(s) 425
BpuMI CCSGG 2 cut(s) 508, 1036
Bsa29I ATCGAT 1 cut(s) 75
BsaAI YACGTR 1 cut(s) 288
BsaHI GRCGYC 2 cut(s) 5, 392
BsaJI CCNNGG 4 cut(s) 52, 296, 332, 760
BsaWI WCCGGW 1 cut(s) 8
BsaXI ACNNNNNCTCC 2 cut(s) 674, 704
Bsc4I CCNNNNNNNGG 3 cut(s) 182, 1064, 1146
Bse1I ACTGG 2 cut(s) 813, 1072
BseAI TCCGGA 1 cut(s) 8
BseBI CCWGG 1 cut(s) 54
BseCI ATCGAT 1 cut(s) 75
BseDI CCNNGG 4 cut(s) 52, 296, 332, 760
BseGI GGATG 4 cut(s) 860, 947, 1010, 1225
BseLI CCNNNNNNNGG 3 cut(s) 182, 1064, 1146
BseMII CTCAG 1 cut(s) 491
BseNI ACTGG 2 cut(s) 813, 1072
BseRI GAGGAG 1 cut(s) 1223
BseXI GCAGC 5 cut(s) 257, 468, 514, 542, 1026
BseYI CCCAGC 3 cut(s) 18, 149, 634
BsgI GTGCAG 3 cut(s) 692, 996, 1118
BshFI GGCC 7 cut(s) 50, 57, 467, 633, 689, 812, 1057
BshVI ATCGAT 1 cut(s) 75
BsiHKCI CYCGRG 1 cut(s) 260
BsiSI CCGG 3 cut(s) 9, 507, 1035
BslFI GGGAC 2 cut(s) 505, 1082
BslI CCNNNNNNNGG 3 cut(s) 182, 1064, 1146
BsmAI GTCTC 2 cut(s) 371, 1305
BsmBI CGTCTC 1 cut(s) 1305
BsmFI GGGAC 2 cut(s) 505, 1082
BsnI GGCC 7 cut(s) 50, 57, 467, 633, 689, 812, 1057
BsoBI CYCGRG 1 cut(s) 260
Bsp119I TTCGAA 2 cut(s) 570, 903
Bsp1286I GDGCHC 2 cut(s) 18, 949
Bsp13I TCCGGA 1 cut(s) 8
Bsp143I GATC 5 cut(s) 72, 76, 454, 1047, 1295
Bsp1720I GCTNAGC 1 cut(s) 477
BspACI CCGC 5 cut(s) 137, 191, 489, 950, 1115
BspANI GGCC 7 cut(s) 50, 57, 467, 633, 689, 812, 1057
BspCNI CTCAG 1 cut(s) 490
BspDI ATCGAT 1 cut(s) 75
BspEI TCCGGA 1 cut(s) 8
BspLI GGNNCC 6 cut(s) 51, 582, 735, 926, 948, 1070
BspMAI CTGCAG 1 cut(s) 532
BspMI ACCTGC 2 cut(s) 177, 1090
BspPI GGATC 1 cut(s) 1303
BspQI GCTCTTC 1 cut(s) 243
BspT104I TTCGAA 2 cut(s) 570, 903
BsrI ACTGG 2 cut(s) 813, 1072
BssECI CCNNGG 4 cut(s) 52, 296, 332, 760
BssMI GATC 5 cut(s) 72, 76, 454, 1047, 1295
BssNI GRCGYC 2 cut(s) 5, 392
BssT1I CCWWGG 2 cut(s) 332, 760
Bst2UI CCWGG 1 cut(s) 54
Bst4CI ACNGT 5 cut(s) 304, 645, 834, 974, 1062
Bst6I CTCTTC 4 cut(s) 243, 567, 1152, 1237
BstACI GRCGYC 2 cut(s) 5, 392
BstBAI YACGTR 1 cut(s) 288
BstBI TTCGAA 2 cut(s) 570, 903
BstC8I GCNNGC 4 cut(s) 231, 585, 757, 1172
BstDEI CTNAG 2 cut(s) 477, 814
BstDSI CCRYGG 1 cut(s) 296
BstF5I GGATG 4 cut(s) 860, 947, 1010, 1225
BstHHI GCGC 2 cut(s) 98, 196
BstKTI GATC 5 cut(s) 75, 79, 457, 1050, 1298
BstMAI GTCTC 2 cut(s) 371, 1305
BstMBI GATC 5 cut(s) 72, 76, 454, 1047, 1295
BstMWI GCNNNNNNNGC 4 cut(s) 448, 473, 818, 1280
BstNI CCWGG 1 cut(s) 54
BstSCI CCNGG 3 cut(s) 52, 506, 1034
BstSFI CTRYAG 2 cut(s) 528, 744
BstV1I GCAGC 5 cut(s) 257, 468, 514, 542, 1026
BstV2I GAAGAC 1 cut(s) 614
BstXI CCANNNNNNTGG 1 cut(s) 92
Bsu15I ATCGAT 1 cut(s) 75
BsuI GTATCC 1 cut(s) 1146
BsuRI GGCC 7 cut(s) 50, 57, 467, 633, 689, 812, 1057
BsuTUI ATCGAT 1 cut(s) 75
BtgI CCRYGG 1 cut(s) 296
BtgZI GCGATG 1 cut(s) 65
BtrI CACGTC 1 cut(s) 1306
BtsCI GGATG 4 cut(s) 860, 947, 1010, 1225
BtsIMutI CAGTG 3 cut(s) 309, 641, 1058
BveI ACCTGC 2 cut(s) 177, 1090
Cac8I GCNNGC 4 cut(s) 231, 585, 757, 1172
CfoI GCGC 2 cut(s) 98, 196
Cfr13I GGNCC 4 cut(s) 49, 166, 632, 1069
ClaI ATCGAT 1 cut(s) 75
CseI GACGC 1 cut(s) 381
Csp6I GTAC 2 cut(s) 430, 601
CviAII CATG 7 cut(s) 34, 46, 61, 126, 163, 1053, 1336
CviQI GTAC 2 cut(s) 430, 601
DdeI CTNAG 2 cut(s) 477, 814
DpnI GATC 5 cut(s) 74, 78, 456, 1049, 1297
DpnII GATC 5 cut(s) 72, 76, 454, 1047, 1295
DraIII CACNNNGTG 1 cut(s) 974
EaeI YGGCCR 1 cut(s) 1055
Eam1104I CTCTTC 4 cut(s) 243, 567, 1152, 1237
EarI CTCTTC 4 cut(s) 243, 567, 1152, 1237
Eco130I CCWWGG 2 cut(s) 332, 760
Eco147I AGGCCT 1 cut(s) 689
Eco24I GRGCYC 2 cut(s) 18, 949
Eco32I GATATC 2 cut(s) 339, 1333
Eco47I GGWCC 2 cut(s) 166, 1069
Eco88I CYCGRG 1 cut(s) 260
EcoRII CCWGG 1 cut(s) 52
EcoRV GATATC 2 cut(s) 339, 1333
EcoT14I CCWWGG 2 cut(s) 332, 760
EcoT38I GRGCYC 2 cut(s) 18, 949
ErhI CCWWGG 2 cut(s) 332, 760
Esp3I CGTCTC 1 cut(s) 1305
FaeI CATG 7 cut(s) 37, 49, 64, 129, 166, 1056, 1339
FalI AAGNNNNNCTT 2 cut(s) 325, 357
FaqI GGGAC 2 cut(s) 505, 1082
FatI CATG 7 cut(s) 33, 45, 60, 125, 162, 1052, 1335
FauI CCCGC 2 cut(s) 130, 482
FbaI TGATCA 1 cut(s) 1047
Fnu4HI GCNGC 6 cut(s) 192, 271, 482, 528, 531, 1040
FokI GGATG 4 cut(s) 867, 954, 1017, 1232
FriOI GRGCYC 2 cut(s) 18, 949
Fsp4HI GCNGC 6 cut(s) 192, 271, 482, 528, 531, 1040
FspBI CTAG 2 cut(s) 116, 1091
GlaI GCGC 2 cut(s) 97, 195
GluI GCNGC 6 cut(s) 192, 271, 482, 528, 531, 1040
GsaI CCCAGC 3 cut(s) 22, 153, 638
HaeIII GGCC 7 cut(s) 50, 57, 467, 633, 689, 812, 1057
HapII CCGG 3 cut(s) 9, 507, 1035
HgaI GACGC 1 cut(s) 381
HhaI GCGC 2 cut(s) 98, 196
Hin1I GRCGYC 2 cut(s) 5, 392
Hin1II CATG 7 cut(s) 37, 49, 64, 129, 166, 1056, 1339
Hin6I GCGC 2 cut(s) 96, 194
HinP1I GCGC 2 cut(s) 96, 194
HincII GTYRAC 1 cut(s) 1309
HindII GTYRAC 1 cut(s) 1309
HinfI GANTC 5 cut(s) 88, 351, 493, 725, 900
HpaII CCGG 3 cut(s) 9, 507, 1035
HphI GGTGA 3 cut(s) 1129, 1189, 1225
Hpy166II GTNNAC 3 cut(s) 300, 788, 1309
Hpy188I TCNGA 3 cut(s) 283, 421, 868
Hpy188III TCNNGA 4 cut(s) 9, 404, 559, 892
Hpy8I GTNNAC 3 cut(s) 300, 788, 1309
Hpy99I CGWCG 1 cut(s) 397
HpyAV CCTTC 5 cut(s) 186, 915, 1016, 1229, 1283
HpyCH4III ACNGT 5 cut(s) 304, 645, 834, 974, 1062
HpyCH4IV ACGT 3 cut(s) 287, 1305, 1311
HpyF10VI GCNNNNNNNGC 4 cut(s) 448, 473, 818, 1280
HpyF3I CTNAG 2 cut(s) 477, 814
HpySE526I ACGT 3 cut(s) 287, 1305, 1311
Hsp92I GRCGYC 2 cut(s) 5, 392
Hsp92II CATG 7 cut(s) 37, 49, 64, 129, 166, 1056, 1339
HspAI GCGC 2 cut(s) 96, 194
Kpn2I TCCGGA 1 cut(s) 8
Ksp22I TGATCA 1 cut(s) 1047
Kzo9I GATC 5 cut(s) 72, 76, 454, 1047, 1295
LguI GCTCTTC 1 cut(s) 243
LmnI GCTCC 3 cut(s) 580, 924, 952
Lsp1109I GCAGC 5 cut(s) 257, 468, 514, 542, 1026
LweI GCATC 2 cut(s) 830, 845
MaeI CTAG 2 cut(s) 116, 1091
MaeII ACGT 3 cut(s) 287, 1305, 1311
MaeIII GTNAC 4 cut(s) 680, 966, 1192, 1312
MalI GATC 5 cut(s) 74, 78, 456, 1049, 1297
MboI GATC 5 cut(s) 72, 76, 454, 1047, 1295
MboII GAAGA 9 cut(s) 143, 260, 584, 619, 917, 1169, 1174, 1238, 1254
MfeI CAATTG 1 cut(s) 791
MhlI GDGCHC 2 cut(s) 18, 949
MlsI TGGCCA 1 cut(s) 1057
MluCI AATT 9 cut(s) 119, 309, 384, 409, 459, 522, 536, 791, 1110
MluNI TGGCCA 1 cut(s) 1057
MlyI GAGTC 2 cut(s) 82, 487
MmeI TCCRAC 2 cut(s) 558, 855
Mox20I TGGCCA 1 cut(s) 1057
MroI TCCGGA 1 cut(s) 8
MroXI GAANNNNTTC 1 cut(s) 566
MscI TGGCCA 1 cut(s) 1057
MseI TTAA 5 cut(s) 324, 413, 992, 1080, 1107
Msp20I TGGCCA 1 cut(s) 1057
MspA1I CMGCKG 2 cut(s) 481, 533
MspI CCGG 3 cut(s) 9, 507, 1035
MspR9I CCNGG 3 cut(s) 54, 508, 1036
MunI CAATTG 1 cut(s) 791
MvaI CCWGG 1 cut(s) 54
MwoI GCNNNNNNNGC 4 cut(s) 448, 473, 818, 1280
NciI CCSGG 2 cut(s) 508, 1036
NdeII GATC 5 cut(s) 72, 76, 454, 1047, 1295
NlaIII CATG 7 cut(s) 37, 49, 64, 129, 166, 1056, 1339
NlaIV GGNNCC 6 cut(s) 51, 582, 735, 926, 948, 1070
NmuCI GTSAC 1 cut(s) 966
NspV TTCGAA 2 cut(s) 570, 903
PceI AGGCCT 1 cut(s) 689
PciSI GCTCTTC 1 cut(s) 243
PcsI WCGNNNNNNNCGW 2 cut(s) 293, 830
PdmI GAANNNNTTC 1 cut(s) 566
PfeI GAWTC 3 cut(s) 351, 725, 900
PflMI CCANNNNNTGG 1 cut(s) 1064
PkrI GCNGC 6 cut(s) 193, 272, 483, 529, 532, 1041
PleI GAGTC 2 cut(s) 82, 487
PpsI GAGTC 2 cut(s) 82, 487
Ppu21I YACGTR 1 cut(s) 288
Psp1406I AACGTT 1 cut(s) 1311
Psp6I CCWGG 1 cut(s) 52
PspFI CCCAGC 3 cut(s) 18, 149, 634
PspGI CCWGG 1 cut(s) 52
PspN4I GGNNCC 6 cut(s) 51, 582, 735, 926, 948, 1070
PspPI GGNCC 4 cut(s) 49, 166, 632, 1069
PstI CTGCAG 1 cut(s) 532
PvuII CAGCTG 2 cut(s) 481, 533
RsaI GTAC 2 cut(s) 431, 602
RsaNI GTAC 2 cut(s) 430, 601
SapI GCTCTTC 1 cut(s) 243
SaqAI TTAA 5 cut(s) 324, 413, 992, 1080, 1107
SatI GCNGC 6 cut(s) 192, 271, 482, 528, 531, 1040
Sau3AI GATC 5 cut(s) 72, 76, 454, 1047, 1295
Sau96I GGNCC 4 cut(s) 49, 166, 632, 1069
ScaI AGTACT 1 cut(s) 431
SchI GAGTC 2 cut(s) 82, 487
ScrFI CCNGG 3 cut(s) 54, 508, 1036
SduI GDGCHC 2 cut(s) 18, 949
SfaNI GCATC 2 cut(s) 830, 845
SfcI CTRYAG 2 cut(s) 528, 744
SfuI TTCGAA 2 cut(s) 570, 903
SinI GGWCC 2 cut(s) 166, 1069
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
SpeI ACTAGT 1 cut(s) 1090
Sse9I AATT 9 cut(s) 119, 309, 384, 409, 459, 522, 536, 791, 1110
SseBI AGGCCT 1 cut(s) 689
SsiI CCGC 5 cut(s) 137, 191, 489, 950, 1115
SspMI CTAG 2 cut(s) 116, 1091
StuI AGGCCT 1 cut(s) 689
StyD4I CCNGG 3 cut(s) 52, 506, 1034
StyI CCWWGG 2 cut(s) 332, 760
TaaI ACNGT 5 cut(s) 304, 645, 834, 974, 1062
TaiI ACGT 3 cut(s) 290, 1308, 1314
TaqI TCGA 8 cut(s) 75, 395, 457, 570, 824, 891, 903, 1013
TasI AATT 9 cut(s) 119, 309, 384, 409, 459, 522, 536, 791, 1110
TatI WGTACW 1 cut(s) 429
TauI GCSGC 1 cut(s) 194
TfiI GAWTC 3 cut(s) 351, 725, 900
Tru1I TTAA 5 cut(s) 324, 413, 992, 1080, 1107
Tru9I TTAA 5 cut(s) 324, 413, 992, 1080, 1107
TscAI CASTG 3 cut(s) 309, 648, 1065
TseFI GTSAC 1 cut(s) 966
TseI GCWGC 5 cut(s) 270, 481, 527, 530, 1039
Tsp45I GTSAC 1 cut(s) 966
TspDTI ATGAA 4 cut(s) 34, 714, 826, 1098
TspGWI ACGGA 2 cut(s) 285, 440
TspRI CASTG 3 cut(s) 309, 648, 1065
Van91I CCANNNNNTGG 1 cut(s) 1064
VpaK11BI GGWCC 2 cut(s) 166, 1069
XapI RAATTY 3 cut(s) 119, 384, 409
XmnI GAANNNNTTC 1 cut(s) 566
XspI CTAG 2 cut(s) 116, 1091
ZrmI AGTACT 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.