RLG00000024208

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
33083693 .. 33085256
1564 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024208

Sequence Viewer

Length: 1470 bp
ATGGCTTCTCAGGAATGCCAGCTCCACTTTGTCTTGTTTCCTTTTATGGCCCAAGGCCACATGATTCCAATGGTAGACATTGCTAGAATGCTTGCACAACGCGGCGTGGCTATCACCATAGTCACCACACCATTTAATGCAGCTCGTTTCGAAACCGTTCTTACTCGCACCAAAGAATCGGGCCACAAAATCTGGTTGATCCAGCTGAAATTTCCATCTGAAGGAGCTGGGTTGCCTCATGGCTGTGAGAACTTGGACATGGTACCTTCCTTCAACTTGGCCTCAAAATTCTTCGATGCAACCAAAGGGCTACAAGAGCCAGTAGAGAAACTGTTTGAAGACCTGACCCCCAAGCCAAGTTGTATCATCTCAGACACGTGCTTCCCATGGACAATCAACATCTCTCGCATGTTTAACATTCCACGGATATCTTTCAGTGGAACATGTTGCTTCGCTCTGTTATGTTTTGACAATGTGCGCATATCCAAGGTTCTTGATGATATAACCTCTGAGACGGAGTACTTTGTCCTGCCTGACTTGCCAGATCGCATTGAGATAACCAAAGCTCAGCTACCGGGAACTATGGCACCAAACATGGAAGATTTTATAGAAACATTGCTTTCAGCTGAGATGGACTCGTATGGGACAATTATGAATAGCTTTGAAGAGTTGGAGCCAGCATATGTTAAAGAATACAAGAAGGTAAAGAAAGATAGAGTATGGTGTGTTGGCCCTGCATCACTATGCAACAAAGATGACGTGGATAAGGCACAAAGAGGTAACAAGGCCTCGATAGATGAACATTACTGCTTGAAGTGGCTTGATTCTTGGGAACCAAGCTCAGTACTTTATGCTTGCTTTGGGAGTTTATGTAATCTCATACCTGCACAACTCATAGAACTTGGATTGGGACTAGAGGCAACCAATAAACCATTCATTTGGGCTGTGAGGGGCAGTAGTCAGTCAGAGGTTTTGGAAAAGTGGATAACAGAAAACAGATTTGAGGAAAGGACCAAAGGAAGGAGCTTGCTGATTCGGGGTTGGGCTCCGCAGACACTAATACTGTCACACCCTGCAGTCGGGGGTTTCTTAACACATTGTGGTTGGAACTCTACATTAGAAGGGATATGTGCTGGGGTGCCTTTGATTACATGGCCACTGTTTGGAGACCAATTTCTCAACGAGAAACTAGTAGAACAGATTCTAAAGATTGCAGTGAGAGTTGAGGTGGAGTATCAGACGAAGTGGGGAGAGGAGGAAGGTATTGGGGTGTTGGTGAAAAAGGAAAATGTGAAGGAAGCTATAGACAAGTTGATGGATGGAGAAGAAAGCCAAGCGCGAAGAGATAGAGCCAGAGAGCTTGCTAAATTAGCAAAGAGAGCAGTAGAAGAAGGGGGATCTTCTCACCTCAACATTGAACTACTAATCCATGATATCATGCAACTAGGGAATTGCACAGAGACATACTAA

Protein Analysis

490

Amino Acids

55.06

Weight (kDa)

5.19

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 10 - 245 1.4e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 281 - 438 2.9e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 479
Acc36I ACCTGC 1 cut(s) 892
Acc65I GGTACC 1 cut(s) 262
AccB1I GGYRCC 3 cut(s) 262, 586, 1138
AccB7I CCANNNNNTGG 1 cut(s) 1163
AccI GTMKAC 1 cut(s) 75
AccII CGCG 2 cut(s) 102, 1339
AciI CCGC 2 cut(s) 102, 1049
AclWI GGATC 2 cut(s) 193, 1405
AcoI YGGCCR 1 cut(s) 1154
AcsI RAATTY 2 cut(s) 209, 287
AcuI CTGAAG 1 cut(s) 240
AcvI CACGTG 1 cut(s) 378
AdeI CACNNNGTG 1 cut(s) 1100
AfaI GTAC 3 cut(s) 264, 521, 846
AfiI CCNNNNNNNGG 4 cut(s) 221, 1020, 1079, 1163
AflIII ACRYGT 2 cut(s) 375, 443
AgsI TTSAA 5 cut(s) 274, 338, 665, 814, 1418
AhlI ACTAGT 1 cut(s) 1189
AjiI CACGTC 1 cut(s) 760
AjuI GAANNNNNNNTTGG 2 cut(s) 917, 949
AloI GAACNNNNNNTCC 2 cut(s) 1410, 1442
Alw26I GTCTC 3 cut(s) 506, 1161, 1454
AlwI GGATC 2 cut(s) 193, 1405
AoxI GGCC 7 cut(s) 48, 55, 181, 279, 730, 786, 1154
ApeKI GCWGC 1 cut(s) 140
ApoI RAATTY 2 cut(s) 209, 287
Asp700I GAANNNNTTC 2 cut(s) 156, 1200
Asp718I GGTACC 1 cut(s) 262
AspLEI GCGC 2 cut(s) 480, 1339
AspS9I GGNCC 4 cut(s) 49, 181, 731, 1011
AsuC2I CCSGG 1 cut(s) 576
AsuHPI GGTGA 4 cut(s) 106, 115, 1288, 1397
AsuII TTCGAA 1 cut(s) 150
AvaII GGWCC 1 cut(s) 1011
BalI TGGCCA 1 cut(s) 1156
BanI GGYRCC 3 cut(s) 262, 586, 1138
BanII GRGCYC 1 cut(s) 1048
BbrPI CACGTG 1 cut(s) 378
BbsI GAAGAC 1 cut(s) 345
BbvI GCAGC 1 cut(s) 152
BccI CCATC 4 cut(s) 223, 625, 1309, 1313
BcnI CCSGG 1 cut(s) 576
BcoDI GTCTC 3 cut(s) 506, 1161, 1454
BcuI ACTAGT 1 cut(s) 1189
BfaI CTAG 4 cut(s) 84, 914, 1190, 1445
BfmI CTRYAG 2 cut(s) 1074, 1302
BfuAI ACCTGC 1 cut(s) 892
BisI GCNGC 2 cut(s) 103, 141
BlpI GCTNAGC 1 cut(s) 567
BlsI GCNGC 2 cut(s) 104, 142
BmcAI AGTACT 2 cut(s) 521, 846
Bme1390I CCNGG 1 cut(s) 576
Bme18I GGWCC 1 cut(s) 1011
BmgBI CACGTC 1 cut(s) 760
BmgT120I GGNCC 4 cut(s) 49, 181, 731, 1011
BmiI GGNNCC 6 cut(s) 264, 588, 675, 834, 1047, 1140
BmrFI CCNGG 1 cut(s) 576
BmsI GCATC 2 cut(s) 286, 746
BpiI GAAGAC 1 cut(s) 345
BplI GAGNNNNNCTC 2 cut(s) 620, 652
Bpu1102I GCTNAGC 1 cut(s) 567
Bpu14I TTCGAA 1 cut(s) 150
BpuMI CCSGG 1 cut(s) 576
BsaAI YACGTR 1 cut(s) 378
BsaI GGTCTC 1 cut(s) 1161
BsaJI CCNNGG 4 cut(s) 52, 386, 422, 486
BsaXI ACNNNNNCTCC 2 cut(s) 856, 886
Bsc4I CCNNNNNNNGG 4 cut(s) 221, 1020, 1079, 1163
Bse1I ACTGG 1 cut(s) 320
Bse3DI GCAATG 2 cut(s) 78, 614
BseDI CCNNGG 4 cut(s) 52, 386, 422, 486
BseGI GGATG 1 cut(s) 1324
BseLI CCNNNNNNNGG 4 cut(s) 221, 1020, 1079, 1163
BseMI GCAATG 2 cut(s) 78, 614
BseMII CTCAG 6 cut(s) 23, 384, 501, 581, 618, 855
BseNI ACTGG 1 cut(s) 320
BseRI GAGGAG 1 cut(s) 1268
BseXI GCAGC 1 cut(s) 152
BseYI CCCAGC 2 cut(s) 227, 1133
BsgI GTGCAG 1 cut(s) 870
Bsh1236I CGCG 2 cut(s) 102, 1339
BshFI GGCC 7 cut(s) 50, 57, 183, 281, 732, 788, 1156
BshNI GGYRCC 3 cut(s) 262, 586, 1138
BsiSI CCGG 1 cut(s) 575
BslFI GGGAC 2 cut(s) 658, 924
BslI CCNNNNNNNGG 4 cut(s) 221, 1020, 1079, 1163
BsmAI GTCTC 3 cut(s) 506, 1161, 1454
BsmBI CGTCTC 1 cut(s) 506
BsmFI GGGAC 2 cut(s) 658, 924
BsmI GAATGC 2 cut(s) 20, 93
BsnI GGCC 7 cut(s) 50, 57, 183, 281, 732, 788, 1156
Bso31I GGTCTC 1 cut(s) 1161
Bsp119I TTCGAA 1 cut(s) 150
Bsp1286I GDGCHC 1 cut(s) 1048
Bsp143I GATC 3 cut(s) 198, 544, 1397
Bsp1720I GCTNAGC 1 cut(s) 567
Bsp19I CCATGG 1 cut(s) 386
BspACI CCGC 2 cut(s) 102, 1049
BspANI GGCC 7 cut(s) 50, 57, 183, 281, 732, 788, 1156
BspCNI CTCAG 6 cut(s) 22, 383, 502, 580, 619, 854
BspFNI CGCG 2 cut(s) 102, 1339
BspLI GGNNCC 6 cut(s) 264, 588, 675, 834, 1047, 1140
BspMAI CTGCAG 1 cut(s) 1078
BspMI ACCTGC 1 cut(s) 892
BspPI GGATC 2 cut(s) 193, 1405
BspT104I TTCGAA 1 cut(s) 150
BspT107I GGYRCC 3 cut(s) 262, 586, 1138
BspTNI GGTCTC 1 cut(s) 1161
BsrDI GCAATG 2 cut(s) 78, 614
BsrI ACTGG 1 cut(s) 320
BssECI CCNNGG 4 cut(s) 52, 386, 422, 486
BssMI GATC 3 cut(s) 198, 544, 1397
BssT1I CCWWGG 3 cut(s) 52, 386, 486
Bst4CI ACNGT 4 cut(s) 157, 333, 1065, 1161
Bst6I CTCTTC 2 cut(s) 660, 1336
BstBAI YACGTR 1 cut(s) 378
BstBI TTCGAA 1 cut(s) 150
BstC8I GCNNGC 6 cut(s) 20, 93, 678, 856, 1028, 1362
BstDEI CTNAG 6 cut(s) 9, 370, 510, 567, 627, 841
BstDSI CCRYGG 2 cut(s) 386, 422
BstF5I GGATG 1 cut(s) 1324
BstFNI CGCG 2 cut(s) 102, 1339
BstHHI GCGC 2 cut(s) 480, 1339
BstKTI GATC 3 cut(s) 201, 547, 1400
BstMAI GTCTC 3 cut(s) 506, 1161, 1454
BstMBI GATC 3 cut(s) 198, 544, 1397
BstMWI GCNNNNNNNGC 4 cut(s) 316, 538, 1370, 1379
BstNSI RCATGY 2 cut(s) 412, 447
BstSCI CCNGG 1 cut(s) 574
BstSFI CTRYAG 2 cut(s) 1074, 1302
BstUI CGCG 2 cut(s) 102, 1339
BstV1I GCAGC 1 cut(s) 152
BstV2I GAAGAC 1 cut(s) 345
BstX2I RGATCY 1 cut(s) 1397
BstXI CCANNNNNNTGG 1 cut(s) 939
BstYI RGATCY 1 cut(s) 1397
BsuRI GGCC 7 cut(s) 50, 57, 183, 281, 732, 788, 1156
BtgI CCRYGG 2 cut(s) 386, 422
BtrI CACGTC 1 cut(s) 760
BtsCI GGATG 1 cut(s) 1324
BtsI GCAGTG 1 cut(s) 1221
BtsIMutI CAGTG 3 cut(s) 442, 1157, 1221
BveI ACCTGC 1 cut(s) 892
Cac8I GCNNGC 6 cut(s) 20, 93, 678, 856, 1028, 1362
CfoI GCGC 2 cut(s) 480, 1339
Cfr13I GGNCC 4 cut(s) 49, 181, 731, 1011
Csp6I GTAC 3 cut(s) 263, 520, 845
CviQI GTAC 3 cut(s) 263, 520, 845
DdeI CTNAG 6 cut(s) 9, 370, 510, 567, 627, 841
DpnI GATC 3 cut(s) 200, 546, 1399
DpnII GATC 3 cut(s) 198, 544, 1397
DraIII CACNNNGTG 1 cut(s) 1100
EaeI YGGCCR 1 cut(s) 1154
Eam1104I CTCTTC 2 cut(s) 660, 1336
EarI CTCTTC 2 cut(s) 660, 1336
Eco130I CCWWGG 3 cut(s) 52, 386, 486
Eco147I AGGCCT 1 cut(s) 788
Eco24I GRGCYC 1 cut(s) 1048
Eco31I GGTCTC 1 cut(s) 1161
Eco32I GATATC 2 cut(s) 429, 1435
Eco47I GGWCC 1 cut(s) 1011
Eco57I CTGAAG 1 cut(s) 240
Eco72I CACGTG 1 cut(s) 378
EcoRV GATATC 2 cut(s) 429, 1435
EcoT14I CCWWGG 3 cut(s) 52, 386, 486
EcoT38I GRGCYC 1 cut(s) 1048
ErhI CCWWGG 3 cut(s) 52, 386, 486
Esp3I CGTCTC 1 cut(s) 506
FaqI GGGAC 2 cut(s) 658, 924
FauNDI CATATG 1 cut(s) 682
FblI GTMKAC 1 cut(s) 75
Fnu4HI GCNGC 2 cut(s) 103, 141
FokI GGATG 1 cut(s) 1331
FriOI GRGCYC 1 cut(s) 1048
Fsp4HI GCNGC 2 cut(s) 103, 141
FspAI RTGCGCAY 1 cut(s) 479
FspBI CTAG 4 cut(s) 84, 914, 1190, 1445
FspI TGCGCA 1 cut(s) 479
GlaI GCGC 2 cut(s) 479, 1338
GluI GCNGC 2 cut(s) 103, 141
GsaI CCCAGC 2 cut(s) 231, 1137
HaeIII GGCC 7 cut(s) 50, 57, 183, 281, 732, 788, 1156
HapII CCGG 1 cut(s) 575
HhaI GCGC 2 cut(s) 480, 1339
Hin6I GCGC 2 cut(s) 478, 1337
HinP1I GCGC 2 cut(s) 478, 1337
HinfI GANTC 6 cut(s) 64, 176, 635, 824, 1033, 1201
HpaII CCGG 1 cut(s) 575
HphI GGTGA 4 cut(s) 106, 115, 1288, 1397
Hpy166II GTNNAC 1 cut(s) 76
Hpy188I TCNGA 5 cut(s) 220, 373, 511, 967, 1239
Hpy188III TCNNGA 2 cut(s) 11, 494
Hpy8I GTNNAC 1 cut(s) 76
HpyAV CCTTC 9 cut(s) 215, 276, 280, 694, 1014, 1115, 1253, 1288, 1385
HpyCH4III ACNGT 4 cut(s) 157, 333, 1065, 1161
HpyCH4IV ACGT 2 cut(s) 377, 759
HpyF10VI GCNNNNNNNGC 4 cut(s) 316, 538, 1370, 1379
HpyF3I CTNAG 6 cut(s) 9, 370, 510, 567, 627, 841
HpySE526I ACGT 2 cut(s) 377, 759
HspAI GCGC 2 cut(s) 478, 1337
KpnI GGTACC 1 cut(s) 266
Kzo9I GATC 3 cut(s) 198, 544, 1397
LmnI GCTCC 5 cut(s) 27, 224, 673, 1023, 1051
Lsp1109I GCAGC 1 cut(s) 152
LweI GCATC 2 cut(s) 286, 746
MaeI CTAG 4 cut(s) 84, 914, 1190, 1445
MaeII ACGT 2 cut(s) 377, 759
MaeIII GTNAC 3 cut(s) 121, 779, 1065
MalI GATC 3 cut(s) 200, 546, 1399
MboI GATC 3 cut(s) 198, 544, 1397
MboII GAAGA 8 cut(s) 283, 350, 611, 677, 1337, 1353, 1392, 1400
MflI RGATCY 1 cut(s) 1397
MhlI GDGCHC 1 cut(s) 1048
MlsI TGGCCA 1 cut(s) 1156
MluCI AATT 6 cut(s) 209, 287, 648, 1172, 1367, 1450
MluNI TGGCCA 1 cut(s) 1156
MlyI GAGTC 1 cut(s) 629
MmeI TCCRAC 2 cut(s) 651, 1085
Mox20I TGGCCA 1 cut(s) 1156
MroXI GAANNNNTTC 2 cut(s) 156, 1200
MscI TGGCCA 1 cut(s) 1156
MseI TTAA 4 cut(s) 135, 414, 687, 1091
MslI CAYNNNNRTG 2 cut(s) 243, 742
Msp20I TGGCCA 1 cut(s) 1156
MspA1I CMGCKG 2 cut(s) 205, 626
MspI CCGG 1 cut(s) 575
MspR9I CCNGG 1 cut(s) 576
Mva1269I GAATGC 2 cut(s) 20, 93
MvnI CGCG 2 cut(s) 102, 1339
MwoI GCNNNNNNNGC 4 cut(s) 316, 538, 1370, 1379
NciI CCSGG 1 cut(s) 576
NcoI CCATGG 1 cut(s) 386
NdeI CATATG 1 cut(s) 682
NdeII GATC 3 cut(s) 198, 544, 1397
NlaIV GGNNCC 6 cut(s) 264, 588, 675, 834, 1047, 1140
NmuCI GTSAC 2 cut(s) 121, 1065
NsbI TGCGCA 1 cut(s) 479
NspI RCATGY 2 cut(s) 412, 447
NspV TTCGAA 1 cut(s) 150
PceI AGGCCT 1 cut(s) 788
PciI ACATGT 1 cut(s) 443
PctI GAATGC 2 cut(s) 20, 93
PdmI GAANNNNTTC 2 cut(s) 156, 1200
PfeI GAWTC 5 cut(s) 64, 176, 824, 1033, 1201
PflMI CCANNNNNTGG 1 cut(s) 1163
PkrI GCNGC 2 cut(s) 104, 142
PleI GAGTC 1 cut(s) 629
PmaCI CACGTG 1 cut(s) 378
PmlI CACGTG 1 cut(s) 378
PpsI GAGTC 1 cut(s) 629
Ppu21I YACGTR 1 cut(s) 378
PscI ACATGT 1 cut(s) 443
PspCI CACGTG 1 cut(s) 378
PspFI CCCAGC 2 cut(s) 227, 1133
PspN4I GGNNCC 6 cut(s) 264, 588, 675, 834, 1047, 1140
PspPI GGNCC 4 cut(s) 49, 181, 731, 1011
PstI CTGCAG 1 cut(s) 1078
PsuI RGATCY 1 cut(s) 1397
PvuII CAGCTG 2 cut(s) 205, 626
RsaI GTAC 3 cut(s) 264, 521, 846
RsaNI GTAC 3 cut(s) 263, 520, 845
RseI CAYNNNNRTG 2 cut(s) 243, 742
SaqAI TTAA 4 cut(s) 135, 414, 687, 1091
SatI GCNGC 2 cut(s) 103, 141
Sau3AI GATC 3 cut(s) 198, 544, 1397
Sau96I GGNCC 4 cut(s) 49, 181, 731, 1011
ScaI AGTACT 2 cut(s) 521, 846
SchI GAGTC 1 cut(s) 629
ScrFI CCNGG 1 cut(s) 576
SduI GDGCHC 1 cut(s) 1048
SfaNI GCATC 2 cut(s) 286, 746
SfcI CTRYAG 2 cut(s) 1074, 1302
SfuI TTCGAA 1 cut(s) 150
SinI GGWCC 1 cut(s) 1011
SmiMI CAYNNNNRTG 2 cut(s) 243, 742
SpeI ACTAGT 1 cut(s) 1189
Sse9I AATT 6 cut(s) 209, 287, 648, 1172, 1367, 1450
SseBI AGGCCT 1 cut(s) 788
SsiI CCGC 2 cut(s) 102, 1049
SspMI CTAG 4 cut(s) 84, 914, 1190, 1445
StuI AGGCCT 1 cut(s) 788
StyD4I CCNGG 1 cut(s) 574
StyI CCWWGG 3 cut(s) 52, 386, 486
TaaI ACNGT 4 cut(s) 157, 333, 1065, 1161
TaiI ACGT 2 cut(s) 380, 762
TaqI TCGA 3 cut(s) 150, 294, 791
TasI AATT 6 cut(s) 209, 287, 648, 1172, 1367, 1450
TatI WGTACW 2 cut(s) 519, 844
TauI GCSGC 1 cut(s) 105
TfiI GAWTC 5 cut(s) 64, 176, 824, 1033, 1201
Tru1I TTAA 4 cut(s) 135, 414, 687, 1091
Tru9I TTAA 4 cut(s) 135, 414, 687, 1091
TscAI CASTG 3 cut(s) 442, 1164, 1221
TseFI GTSAC 2 cut(s) 121, 1065
TseI GCWGC 1 cut(s) 140
Tsp45I GTSAC 2 cut(s) 121, 1065
TspDTI ATGAA 3 cut(s) 668, 813, 925
TspGWI ACGGA 2 cut(s) 439, 530
TspRI CASTG 3 cut(s) 442, 1164, 1221
Van91I CCANNNNNTGG 1 cut(s) 1163
VpaK11BI GGWCC 1 cut(s) 1011
XapI RAATTY 2 cut(s) 209, 287
XceI RCATGY 2 cut(s) 412, 447
XmiI GTMKAC 1 cut(s) 75
XmnI GAANNNNTTC 2 cut(s) 156, 1200
XspI CTAG 4 cut(s) 84, 914, 1190, 1445
ZrmI AGTACT 2 cut(s) 521, 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.