FvH4_6g17020

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
10885099 .. 10887079
1981 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g17020.t1

Sequence Viewer

Length: 1452 bp
ATGGGATCCCCAACACCCCAGCTTCACTTTACCTTATTCCCTCTAATGGCCCAAGGCCACATGATTCCAATGGTTGATATGGCTAGAATGTTGGCACTGCGAGGTGTTACCATAACCATATTCACAACGCCATGCAACGCCGCCCGTTTCAAATCAGTCCTTGATCAAGCCAACGAAGCCGGGCTTCAAATTCGAGTAATCGAACTGAAGTTTCCATGTCAAGAGGCAGGTCTACCGGAGGGGTGCGAGAACTTCGACATGCTACCTTCACCCCACTTAGCCTTCAATTTCTACAATGCAACAGCTATGCTACAAGAGCAAGTAGAGAAGTTGTTCCCAGAGCTAACACCAAAGCCATGTTGCATAATCGCAGACTTATGCTTGCCTTGGACAAACAACATTGCTAACATGTTTGATGTACCAAGGATAAGTTTCCATGCACACTGTTGCTTTTCACTCTTGTGTATGCACAACTTAGGCGTTCATTATAAGGAGTATGAGAGTGTAACCTCCGATTCAGAATACTTTATTGTTCCAGGTAATTTGCCTGATCGAATCGAGGTTACGAAAGCTCAGATACCAGGACCAGTGCTTCCAAACTCGAAGGATTTCCTTGTCCGATTGGGAGCAGCTGAGAGCGCCTCATACGGTTCCATTGTGACTACTTACGAAGAATTCGAGGGAGCATATGTTAATGAGTACAAGAATGCAACAAAAAAGAATTATCTCTGGAGTATCGGACCAACCTTCTTGTGTAACCAAGATGACTTGGAAAGAGGAAACAAGTCCTCAATTGAGAAAAATCAGTGTTTGAAGTGGCTTGATTCCTGGGAACCAAACTCTGTGCTCTATGTTTGCCTCGGAAGCCTATGTAACCTGATGCCTTCACAACTCTTAGAGCTTGGCTTGGGGATTGAAGAGACAAAGAGGCCATTTATTTGGGTACTAAAGGAAGGGAGAACATCAAAAGAGTTAGAGGAGTTGCTCTTGAAAGATGGTTTTGAGGAAAGAAACAAAGAAAGAGGCCTTGTGATCAGGGGTTGGGCACCTCAAGTGTTGATTTTGTCACACCAATCAACTGGAGGGTTTATAACACATTGTGGAACGAGTTCATTTCTTGAAGCAGTATGTGCTGGGGTTCCCATGGCCACTTGGCCACTATTTGGTGACCAATTTTTTGCTGAGCATCTTCTTGTGACAGTTCTGAAAATTGCTGTGAGAATTGGGGTGCCAAAACCACTGAATTGGGGAGAGGAAGAGAAGACTGGGATATTGGTGTATAAGGAAACTGTGAAGGAAGCCATAGAAATATTAATGGATGAAGGTAAAGTAAGCCAAGAGAGAAGGGAGAGAGTTAGGGAGCTTTCAATTTTGGCAAAGAAAGCTGTACAAGAAGGGGGTTCATCTTATGCCAACATTACAAATCTAATCCAACATTTCATGCAATTATGA

Protein Analysis

484

Amino Acids

54.25

Weight (kDa)

5.44

Isoelectric Point (pI)

41.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 280 - 392 5.2e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 489, 1091
Acc36I ACCTGC 1 cut(s) 218
AccB1I GGYRCC 2 cut(s) 1045, 1228
AccB7I CCANNNNNTGG 1 cut(s) 1163
AccI GTMKAC 1 cut(s) 232
AciI CCGC 1 cut(s) 141
AclWI GGATC 1 cut(s) 13
AcoI YGGCCR 2 cut(s) 1146, 1154
AcsI RAATTY 2 cut(s) 189, 674
AcuI CTGAAG 1 cut(s) 227
AdeI CACNNNGTG 1 cut(s) 1100
AfaI GTAC 4 cut(s) 420, 701, 945, 1389
AfiI CCNNNNNNNGG 2 cut(s) 46, 1163
AflIII ACRYGT 1 cut(s) 408
AgsI TTSAA 8 cut(s) 151, 188, 286, 814, 917, 991, 1121, 1368
AjnI CCWGG 3 cut(s) 535, 580, 827
AleI CACNNNNGTG 1 cut(s) 460
AluBI AGCT 8 cut(s) 22, 305, 343, 572, 632, 901, 1363, 1385
AluI AGCT 8 cut(s) 22, 305, 343, 572, 632, 901, 1363, 1385
Alw21I GWGCWC 1 cut(s) 849
Alw26I GTCTC 1 cut(s) 914
AlwI GGATC 1 cut(s) 13
AoxI GGCC 6 cut(s) 48, 55, 929, 1024, 1146, 1154
ApeKI GCWGC 1 cut(s) 629
ApoI RAATTY 2 cut(s) 189, 674
ArsI GACNNNNNNTTYG 2 cut(s) 1160, 1192
AseI ATTAAT 1 cut(s) 1313
Asp700I GAANNNNTTC 3 cut(s) 332, 608, 1108
AspLEI GCGC 1 cut(s) 641
AspS9I GGNCC 3 cut(s) 49, 584, 740
AsuC2I CCSGG 1 cut(s) 181
AsuHPI GGTGA 2 cut(s) 261, 1178
AvaII GGWCC 2 cut(s) 584, 740
BaeGI GKGCMC 1 cut(s) 1048
BalI TGGCCA 2 cut(s) 1148, 1156
BamHI GGATCC 1 cut(s) 5
BanI GGYRCC 2 cut(s) 1045, 1228
BbsI GAAGAC 1 cut(s) 1268
Bbv12I GWGCWC 1 cut(s) 849
BbvI GCAGC 1 cut(s) 641
BccI CCATC 1 cut(s) 989
BciT130I CCWGG 3 cut(s) 537, 582, 829
BclI TGATCA 2 cut(s) 163, 1032
BcnI CCSGG 1 cut(s) 181
BcoDI GTCTC 1 cut(s) 914
BfaI CTAG 1 cut(s) 84
BfoI RGCGCY 1 cut(s) 642
BfuAI ACCTGC 1 cut(s) 218
BisI GCNGC 2 cut(s) 141, 630
BlpI GCTNAGC 1 cut(s) 1182
BlsI GCNGC 2 cut(s) 142, 631
Bme1390I CCNGG 4 cut(s) 181, 537, 582, 829
Bme18I GGWCC 2 cut(s) 584, 740
BmgT120I GGNCC 3 cut(s) 49, 584, 740
BmiI GGNNCC 6 cut(s) 7, 652, 834, 1047, 1140, 1230
BmrFI CCNGG 4 cut(s) 181, 537, 582, 829
BmrI ACTGGG 1 cut(s) 1275
BmsI GCATC 2 cut(s) 870, 1195
BmuI ACTGGG 1 cut(s) 1275
BpiI GAAGAC 1 cut(s) 1268
BplI GAGNNNNNCTC 2 cut(s) 626, 658
BpmI CTGGAG 2 cut(s) 751, 1101
Bpu1102I GCTNAGC 1 cut(s) 1182
BpuEI CTTGAG 1 cut(s) 1035
BpuMI CCSGG 1 cut(s) 181
BsaJI CCNNGG 6 cut(s) 52, 386, 422, 828, 859, 1143
BsaWI WCCGGW 1 cut(s) 235
BsaXI ACNNNNNCTCC 2 cut(s) 675, 705
Bsc4I CCNNNNNNNGG 2 cut(s) 46, 1163
Bse1I ACTGG 3 cut(s) 587, 1084, 1270
Bse3DI GCAATG 1 cut(s) 399
BseBI CCWGG 3 cut(s) 537, 582, 829
BseDI CCNNGG 6 cut(s) 52, 386, 422, 828, 859, 1143
BseGI GGATG 1 cut(s) 1324
BseLI CCNNNNNNNGG 2 cut(s) 46, 1163
BseMI GCAATG 1 cut(s) 399
BseMII CTCAG 3 cut(s) 587, 624, 1173
BseNI ACTGG 3 cut(s) 587, 1084, 1270
BseRI GAGGAG 1 cut(s) 992
BseSI GKGCMC 1 cut(s) 1048
BseXI GCAGC 1 cut(s) 641
BseYI CCCAGC 2 cut(s) 18, 1133
BshFI GGCC 6 cut(s) 50, 57, 931, 1026, 1148, 1156
BshNI GGYRCC 2 cut(s) 1045, 1228
BsiHKAI GWGCWC 1 cut(s) 849
BsiSI CCGG 2 cut(s) 180, 236
BslI CCNNNNNNNGG 2 cut(s) 46, 1163
BsmAI GTCTC 1 cut(s) 914
BsmI GAATGC 1 cut(s) 712
BsnI GGCC 6 cut(s) 50, 57, 931, 1026, 1148, 1156
Bsp1286I GDGCHC 2 cut(s) 849, 1048
Bsp1407I TGTACA 1 cut(s) 1387
Bsp143I GATC 4 cut(s) 5, 163, 550, 1032
Bsp1720I GCTNAGC 1 cut(s) 1182
Bsp19I CCATGG 1 cut(s) 1143
BspACI CCGC 1 cut(s) 141
BspANI GGCC 6 cut(s) 50, 57, 931, 1026, 1148, 1156
BspCNI CTCAG 3 cut(s) 586, 625, 1174
BspLI GGNNCC 6 cut(s) 7, 652, 834, 1047, 1140, 1230
BspMI ACCTGC 1 cut(s) 218
BspPI GGATC 1 cut(s) 13
BspT107I GGYRCC 2 cut(s) 1045, 1228
BsrDI GCAATG 1 cut(s) 399
BsrGI TGTACA 1 cut(s) 1387
BsrI ACTGG 3 cut(s) 587, 1084, 1270
BssECI CCNNGG 6 cut(s) 52, 386, 422, 828, 859, 1143
BssMI GATC 4 cut(s) 5, 163, 550, 1032
BssT1I CCWWGG 4 cut(s) 52, 386, 422, 1143
Bst2UI CCWGG 3 cut(s) 537, 582, 829
Bst4CI ACNGT 4 cut(s) 446, 650, 1201, 1291
Bst6I CTCTTC 2 cut(s) 912, 1251
BstAPI GCANNNNNTGC 1 cut(s) 1130
BstAUI TGTACA 1 cut(s) 1387
BstC8I GCNNGC 1 cut(s) 383
BstDEI CTNAG 6 cut(s) 277, 475, 573, 633, 895, 1182
BstDSI CCRYGG 1 cut(s) 1143
BstEII GGTNACC 1 cut(s) 1166
BstF5I GGATG 1 cut(s) 1324
BstH2I RGCGCY 1 cut(s) 642
BstHHI GCGC 1 cut(s) 641
BstKTI GATC 4 cut(s) 8, 166, 553, 1035
BstMAI GTCTC 1 cut(s) 914
BstMBI GATC 4 cut(s) 5, 163, 550, 1032
BstMWI GCNNNNNNNGC 6 cut(s) 176, 316, 638, 864, 1130, 1382
BstNI CCWGG 3 cut(s) 537, 582, 829
BstNSI RCATGY 2 cut(s) 262, 412
BstPI GGTNACC 1 cut(s) 1166
BstSCI CCNGG 4 cut(s) 179, 535, 580, 827
BstSLI GKGCMC 1 cut(s) 1048
BstV1I GCAGC 1 cut(s) 641
BstV2I GAAGAC 1 cut(s) 1268
BstX2I RGATCY 1 cut(s) 5
BstXI CCANNNNNNTGG 3 cut(s) 939, 1079, 1245
BstYI RGATCY 1 cut(s) 5
BsuRI GGCC 6 cut(s) 50, 57, 931, 1026, 1148, 1156
BtgI CCRYGG 1 cut(s) 1143
BtsCI GGATG 1 cut(s) 1324
BtsI GCAGTG 1 cut(s) 95
BtsIMutI CAGTG 5 cut(s) 95, 442, 594, 812, 1238
BveI ACCTGC 1 cut(s) 218
Cac8I GCNNGC 1 cut(s) 383
CfoI GCGC 1 cut(s) 641
Cfr13I GGNCC 3 cut(s) 49, 584, 740
Csp6I GTAC 4 cut(s) 419, 700, 944, 1388
CviAII CATG 9 cut(s) 61, 132, 216, 259, 357, 409, 437, 1144, 1441
CviQI GTAC 4 cut(s) 419, 700, 944, 1388
DdeI CTNAG 6 cut(s) 277, 475, 573, 633, 895, 1182
DpnI GATC 4 cut(s) 7, 165, 552, 1034
DpnII GATC 4 cut(s) 5, 163, 550, 1032
DraIII CACNNNGTG 1 cut(s) 1100
EaeI YGGCCR 2 cut(s) 1146, 1154
Eam1104I CTCTTC 2 cut(s) 912, 1251
EarI CTCTTC 2 cut(s) 912, 1251
Eco130I CCWWGG 4 cut(s) 52, 386, 422, 1143
Eco147I AGGCCT 1 cut(s) 1026
Eco47I GGWCC 2 cut(s) 584, 740
Eco57I CTGAAG 1 cut(s) 227
Eco91I GGTNACC 1 cut(s) 1166
EcoO65I GGTNACC 1 cut(s) 1166
EcoRI GAATTC 1 cut(s) 674
EcoRII CCWGG 3 cut(s) 535, 580, 827
EcoT14I CCWWGG 4 cut(s) 52, 386, 422, 1143
ErhI CCWWGG 4 cut(s) 52, 386, 422, 1143
FaeI CATG 9 cut(s) 64, 135, 219, 262, 360, 412, 440, 1147, 1444
FalI AAGNNNNNCTT 2 cut(s) 168, 200
FatI CATG 9 cut(s) 60, 131, 215, 258, 356, 408, 436, 1143, 1440
FauNDI CATATG 1 cut(s) 688
FbaI TGATCA 2 cut(s) 163, 1032
FblI GTMKAC 1 cut(s) 232
Fnu4HI GCNGC 2 cut(s) 141, 630
FokI GGATG 1 cut(s) 1331
Fsp4HI GCNGC 2 cut(s) 141, 630
FspBI CTAG 1 cut(s) 84
GlaI GCGC 1 cut(s) 640
GluI GCNGC 2 cut(s) 141, 630
GsaI CCCAGC 2 cut(s) 22, 1137
GsuI CTGGAG 2 cut(s) 751, 1101
HaeII RGCGCY 1 cut(s) 642
HaeIII GGCC 6 cut(s) 50, 57, 931, 1026, 1148, 1156
HapII CCGG 2 cut(s) 180, 236
HhaI GCGC 1 cut(s) 641
Hin1II CATG 9 cut(s) 64, 135, 219, 262, 360, 412, 440, 1147, 1444
Hin6I GCGC 1 cut(s) 639
HinP1I GCGC 1 cut(s) 639
HinfI GANTC 4 cut(s) 64, 515, 555, 824
HpaII CCGG 2 cut(s) 180, 236
HphI GGTGA 2 cut(s) 261, 1178
Hpy166II GTNNAC 1 cut(s) 233
Hpy188I TCNGA 7 cut(s) 514, 520, 576, 620, 740, 863, 1206
Hpy188III TCNNGA 4 cut(s) 221, 730, 988, 1118
Hpy8I GTNNAC 1 cut(s) 233
HpyCH4III ACNGT 4 cut(s) 446, 650, 1201, 1291
HpyCH4V TGCA 7 cut(s) 135, 299, 363, 440, 469, 710, 1444
HpyF10VI GCNNNNNNNGC 6 cut(s) 176, 316, 638, 864, 1130, 1382
HpyF3I CTNAG 6 cut(s) 277, 475, 573, 633, 895, 1182
Hsp92II CATG 9 cut(s) 64, 135, 219, 262, 360, 412, 440, 1147, 1444
HspAI GCGC 1 cut(s) 639
Ksp22I TGATCA 2 cut(s) 163, 1032
Kzo9I GATC 4 cut(s) 5, 163, 550, 1032
LmnI GCTCC 3 cut(s) 626, 683, 1360
Lsp1109I GCAGC 1 cut(s) 641
LweI GCATC 2 cut(s) 870, 1195
MaeI CTAG 1 cut(s) 84
MaeIII GTNAC 9 cut(s) 106, 505, 562, 658, 755, 872, 1065, 1166, 1195
MalI GATC 4 cut(s) 7, 165, 552, 1034
MboI GATC 4 cut(s) 5, 163, 550, 1032
MboII GAAGA 5 cut(s) 683, 929, 1181, 1268, 1273
MfeI CAATTG 1 cut(s) 792
MflI RGATCY 1 cut(s) 5
MhlI GDGCHC 2 cut(s) 849, 1048
MlsI TGGCCA 2 cut(s) 1148, 1156
MluNI TGGCCA 2 cut(s) 1148, 1156
Mox20I TGGCCA 2 cut(s) 1148, 1156
MroXI GAANNNNTTC 3 cut(s) 332, 608, 1108
MscI TGGCCA 2 cut(s) 1148, 1156
MseI TTAA 2 cut(s) 693, 1313
MslI CAYNNNNRTG 1 cut(s) 460
Msp20I TGGCCA 2 cut(s) 1148, 1156
MspA1I CMGCKG 1 cut(s) 632
MspI CCGG 2 cut(s) 180, 236
MspR9I CCNGG 4 cut(s) 181, 537, 582, 829
MunI CAATTG 1 cut(s) 792
Mva1269I GAATGC 1 cut(s) 712
MvaI CCWGG 3 cut(s) 537, 582, 829
MwoI GCNNNNNNNGC 6 cut(s) 176, 316, 638, 864, 1130, 1382
NciI CCSGG 1 cut(s) 181
NcoI CCATGG 1 cut(s) 1143
NdeI CATATG 1 cut(s) 688
NdeII GATC 4 cut(s) 5, 163, 550, 1032
NlaIII CATG 9 cut(s) 64, 135, 219, 262, 360, 412, 440, 1147, 1444
NlaIV GGNNCC 6 cut(s) 7, 652, 834, 1047, 1140, 1230
NmuCI GTSAC 4 cut(s) 658, 1065, 1166, 1195
NspI RCATGY 2 cut(s) 262, 412
OliI CACNNNNGTG 1 cut(s) 460
PceI AGGCCT 1 cut(s) 1026
PciI ACATGT 1 cut(s) 408
PcsI WCGNNNNNNNCGW 1 cut(s) 675
PctI GAATGC 1 cut(s) 712
PdmI GAANNNNTTC 3 cut(s) 332, 608, 1108
PfeI GAWTC 4 cut(s) 64, 515, 555, 824
PflMI CCANNNNNTGG 1 cut(s) 1163
PkrI GCNGC 2 cut(s) 142, 631
PscI ACATGT 1 cut(s) 408
PshBI ATTAAT 1 cut(s) 1313
PsiI TTATAA 2 cut(s) 489, 1091
Psp6I CCWGG 3 cut(s) 535, 580, 827
PspEI GGTNACC 1 cut(s) 1166
PspFI CCCAGC 2 cut(s) 18, 1133
PspGI CCWGG 3 cut(s) 535, 580, 827
PspN4I GGNNCC 6 cut(s) 7, 652, 834, 1047, 1140, 1230
PspPI GGNCC 3 cut(s) 49, 584, 740
PsuI RGATCY 1 cut(s) 5
PvuII CAGCTG 1 cut(s) 632
RsaI GTAC 4 cut(s) 420, 701, 945, 1389
RsaNI GTAC 4 cut(s) 419, 700, 944, 1388
RseI CAYNNNNRTG 1 cut(s) 460
SaqAI TTAA 2 cut(s) 693, 1313
SatI GCNGC 2 cut(s) 141, 630
Sau3AI GATC 4 cut(s) 5, 163, 550, 1032
Sau96I GGNCC 3 cut(s) 49, 584, 740
ScrFI CCNGG 4 cut(s) 181, 537, 582, 829
SduI GDGCHC 2 cut(s) 849, 1048
SfaNI GCATC 2 cut(s) 870, 1195
SinI GGWCC 2 cut(s) 584, 740
SmiMI CAYNNNNRTG 1 cut(s) 460
SmlI CTYRAG 1 cut(s) 1050
SmoI CTYRAG 1 cut(s) 1050
SseBI AGGCCT 1 cut(s) 1026
SsiI CCGC 1 cut(s) 141
SspI AATATT 1 cut(s) 1311
SspMI CTAG 1 cut(s) 84
StuI AGGCCT 1 cut(s) 1026
StyD4I CCNGG 4 cut(s) 179, 535, 580, 827
StyI CCWWGG 4 cut(s) 52, 386, 422, 1143
TaaI ACNGT 4 cut(s) 446, 650, 1201, 1291
TaqI TCGA 7 cut(s) 193, 201, 255, 553, 558, 602, 678
TatI WGTACW 2 cut(s) 699, 1387
TauI GCSGC 1 cut(s) 143
TfiI GAWTC 4 cut(s) 64, 515, 555, 824
Tru1I TTAA 2 cut(s) 693, 1313
Tru9I TTAA 2 cut(s) 693, 1313
TscAI CASTG 5 cut(s) 102, 449, 594, 812, 1245
TseFI GTSAC 4 cut(s) 658, 1065, 1166, 1195
TseI GCWGC 1 cut(s) 629
Tsp45I GTSAC 4 cut(s) 658, 1065, 1166, 1195
TspDTI ATGAA 5 cut(s) 473, 1101, 1335, 1392, 1429
TspRI CASTG 5 cut(s) 102, 449, 594, 812, 1245
Van91I CCANNNNNTGG 1 cut(s) 1163
VpaK11BI GGWCC 2 cut(s) 584, 740
VspI ATTAAT 1 cut(s) 1313
XapI RAATTY 2 cut(s) 189, 674
XceI RCATGY 2 cut(s) 262, 412
XmiI GTMKAC 1 cut(s) 232
XmnI GAANNNNTTC 3 cut(s) 332, 608, 1108
XspI CTAG 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.