FvH4_6g17030

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
10912000 .. 10914472
2473 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g17030.t1

Sequence Viewer

Length: 1539 bp
ATGCATATAGCATCACCAGAAATAAAAAAAAGGGAAAGGCTGGCTTGCATTCTCTATAAAATGCACTCCATGGAAACTCTTCATATCATGGGATCCCAAACACCCCAGCTTCACTTTACCTTATTCCCTCTTATGGCCCAAGGCCACATGATTCCAATGGTTGATATGGCTAGAATGTTGGCACTGCGAGGTGTTACCATAACCATTTTCACCACACCATGCAACGCCGCCCGTTTCAAATCAGTCCTTGATCGTTCCATCGAAGCCGGGCTTCAAATTCGAGTAATCGAACTGAAGTTTCCATGTCAAAAGGCAGGACTACCGGAGGGGTGCGAGAACTTCGACATGTTACCTTCACCCGACCTAGCCTTCAACTTCTATAATGCAACAGCAATGCTGCAAGAGCAAGTAGAGAAGTTGTTCCCAGAGCTCACACCGAAGCCAAGTTGCATAATCGCAGACCTATGCTTGCCTTACACAAACAACATTGCTAACATGTTTGATGTACCAAGGATAAGTTTCCATGTACATTGTTGCTTTTCACTCTTGTGTATGTACAATTTACGAGTTCATTCCAAGTTTCTTGAGAGTGTAACCTCCGATTCGGAGTACTTTATTGTTCCAGGTAATTTGCCTGATCCAATCGAGGTTACGAAAGCTCAGATACCAGGACCATTACTTCCAAACTTGAAGGGTTTCCTTATCGGAATGGGAGCAGCTGAGAGAGCCTCATACGGTTCCATTGTGACCACTTACGAAGAATTCGAGGGAGCATATGTTAATGAGTACAAGAATGCAACAAAAAAGAACCATCTCTGGAGTATAGGACCAACCTTTTTGTGTAACCAAGATGACTTGGAAAGAGGAAACAAGTACTCAATTGATAAAAATCAGTGTTTGAAGTGGCTTGATTCCTGGGAACCAAACTCTGTGCTCTATGTTTGCCTTGGAAGCCTATGTAATCTGATGCCTTCACAACTCTTAGAGCTTGGCTTGGGGATAGAAGAGACAAAGAGGCCATTTATTTGGGTACTAAAGGAAGGGAGAACATCAAAAGAGTTAGAGGAGTTGATCTTGAAAGATGGTTTTGAGGAAAGAAACAAAGAAAGAGGCCTTGTGATCAGGGGTTGGGCACCTCAAGTGTTGATTTTGTCACACCAATCAACTGGAGGGTTTATAACACATTGTGGAACGAGTTCATTTCTTGAAGCAGTATGTGCTGGGGTTCCCATGGCCACTTGGCCACTATTTGGTGACCAATTTTTTGCTGAGCATCTTCTTGTGACAGTTCTGAAAATTGCTGTGAGAATTGGGGTGCCAAAACCACTGAATTGGGGAGAGGAAGAGAAGACTGGGATATTGGTGTATAAGGAAACTGTGAAGGAAGCCATAGAAATATTAATGGATGAAGGTAAAGTAAGCCAAGAGAGAAGGGAGAGAGTTAGGGAGCTTGCAATTTTGGCAAAGAAAGCTGTACAAGAAGGGGGTTCATCTTATGCCAACATTACAAATCTAATCCAACATTTCATGCAATTATGA

Protein Analysis

513

Amino Acids

57.71

Weight (kDa)

6.06

Isoelectric Point (pI)

46.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 309 - 421 6.2e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1178
AccB1I GGYRCC 2 cut(s) 1132, 1315
AccB7I CCANNNNNTGG 1 cut(s) 1250
AciI CCGC 1 cut(s) 228
AclWI GGATC 3 cut(s) 87, 100, 632
AcoI YGGCCR 2 cut(s) 1233, 1241
AcsI RAATTY 2 cut(s) 276, 761
AcuI CTGAAG 1 cut(s) 314
AdeI CACNNNGTG 1 cut(s) 1187
AfaI GTAC 8 cut(s) 507, 528, 557, 611, 788, 875, 1032, 1476
AfiI CCNNNNNNNGG 2 cut(s) 133, 1250
AflIII ACRYGT 2 cut(s) 345, 495
AgsI TTSAA 7 cut(s) 238, 275, 373, 691, 901, 1078, 1208
AjnI CCWGG 3 cut(s) 622, 667, 914
AleI CACNNNNGTG 1 cut(s) 547
AluBI AGCT 7 cut(s) 109, 430, 659, 719, 988, 1450, 1472
AluI AGCT 7 cut(s) 109, 430, 659, 719, 988, 1450, 1472
Alw21I GWGCWC 2 cut(s) 432, 936
Alw26I GTCTC 1 cut(s) 1001
AlwI GGATC 3 cut(s) 87, 100, 632
AoxI GGCC 6 cut(s) 135, 142, 1016, 1111, 1233, 1241
ApeKI GCWGC 2 cut(s) 397, 716
ApoI RAATTY 2 cut(s) 276, 761
ArsI GACNNNNNNTTYG 2 cut(s) 1247, 1279
AseI ATTAAT 1 cut(s) 1400
Asp700I GAANNNNTTC 4 cut(s) 78, 419, 695, 1195
AspS9I GGNCC 3 cut(s) 136, 671, 827
AsuC2I CCSGG 1 cut(s) 268
AsuHPI GGTGA 4 cut(s) 6, 202, 348, 1265
AvaII GGWCC 2 cut(s) 671, 827
BaeGI GKGCMC 1 cut(s) 1135
BalI TGGCCA 2 cut(s) 1235, 1243
BamHI GGATCC 1 cut(s) 92
BanI GGYRCC 2 cut(s) 1132, 1315
BanII GRGCYC 1 cut(s) 432
BbsI GAAGAC 1 cut(s) 1355
Bbv12I GWGCWC 2 cut(s) 432, 936
BbvI GCAGC 2 cut(s) 384, 728
BccI CCATC 3 cut(s) 266, 819, 1076
BciT130I CCWGG 3 cut(s) 624, 669, 916
BclI TGATCA 1 cut(s) 1119
BcnI CCSGG 1 cut(s) 268
BcoDI GTCTC 1 cut(s) 1001
BfaI CTAG 2 cut(s) 171, 365
BisI GCNGC 3 cut(s) 228, 398, 717
BlpI GCTNAGC 1 cut(s) 1269
BlsI GCNGC 3 cut(s) 229, 399, 718
BmcAI AGTACT 2 cut(s) 611, 875
Bme1390I CCNGG 4 cut(s) 268, 624, 669, 916
Bme18I GGWCC 2 cut(s) 671, 827
BmgT120I GGNCC 3 cut(s) 136, 671, 827
BmiI GGNNCC 6 cut(s) 94, 739, 921, 1134, 1227, 1317
BmrFI CCNGG 4 cut(s) 268, 624, 669, 916
BmrI ACTGGG 1 cut(s) 1362
BmsI GCATC 3 cut(s) 20, 957, 1282
BmuI ACTGGG 1 cut(s) 1362
BpiI GAAGAC 1 cut(s) 1355
BplI GAGNNNNNCTC 2 cut(s) 713, 745
BpmI CTGGAG 2 cut(s) 838, 1188
Bpu1102I GCTNAGC 1 cut(s) 1269
BpuEI CTTGAG 2 cut(s) 605, 1122
BpuMI CCSGG 1 cut(s) 268
BsaBI GATNNNNATC 1 cut(s) 888
BsaJI CCNNGG 6 cut(s) 69, 139, 509, 915, 946, 1230
BsaWI WCCGGW 1 cut(s) 322
BsaXI ACNNNNNCTCC 2 cut(s) 762, 792
Bsc4I CCNNNNNNNGG 2 cut(s) 133, 1250
Bse1I ACTGG 2 cut(s) 1171, 1357
Bse3DI GCAATG 2 cut(s) 399, 486
Bse8I GATNNNNATC 1 cut(s) 888
BseBI CCWGG 3 cut(s) 624, 669, 916
BseDI CCNNGG 6 cut(s) 69, 139, 509, 915, 946, 1230
BseGI GGATG 1 cut(s) 1411
BseJI GATNNNNATC 1 cut(s) 888
BseLI CCNNNNNNNGG 2 cut(s) 133, 1250
BseMI GCAATG 2 cut(s) 399, 486
BseMII CTCAG 3 cut(s) 674, 711, 1260
BseNI ACTGG 2 cut(s) 1171, 1357
BseRI GAGGAG 1 cut(s) 1079
BseSI GKGCMC 1 cut(s) 1135
BseXI GCAGC 2 cut(s) 384, 728
BseYI CCCAGC 2 cut(s) 105, 1220
BshFI GGCC 6 cut(s) 137, 144, 1018, 1113, 1235, 1243
BshNI GGYRCC 2 cut(s) 1132, 1315
BsiHKAI GWGCWC 2 cut(s) 432, 936
BsiSI CCGG 2 cut(s) 267, 323
BslI CCNNNNNNNGG 2 cut(s) 133, 1250
BsmAI GTCTC 1 cut(s) 1001
BsmI GAATGC 2 cut(s) 48, 799
BsnI GGCC 6 cut(s) 137, 144, 1018, 1113, 1235, 1243
Bsp1286I GDGCHC 3 cut(s) 432, 936, 1135
Bsp1407I TGTACA 3 cut(s) 526, 555, 1474
Bsp143I GATC 5 cut(s) 92, 250, 637, 1071, 1119
Bsp1720I GCTNAGC 1 cut(s) 1269
Bsp19I CCATGG 2 cut(s) 69, 1230
BspACI CCGC 1 cut(s) 228
BspANI GGCC 6 cut(s) 137, 144, 1018, 1113, 1235, 1243
BspCNI CTCAG 3 cut(s) 673, 712, 1261
BspLI GGNNCC 6 cut(s) 94, 739, 921, 1134, 1227, 1317
BspPI GGATC 3 cut(s) 87, 100, 632
BspT107I GGYRCC 2 cut(s) 1132, 1315
BsrDI GCAATG 2 cut(s) 399, 486
BsrGI TGTACA 3 cut(s) 526, 555, 1474
BsrI ACTGG 2 cut(s) 1171, 1357
BssECI CCNNGG 6 cut(s) 69, 139, 509, 915, 946, 1230
BssMI GATC 5 cut(s) 92, 250, 637, 1071, 1119
BssT1I CCWWGG 5 cut(s) 69, 139, 509, 946, 1230
Bst2UI CCWGG 3 cut(s) 624, 669, 916
Bst4CI ACNGT 3 cut(s) 737, 1288, 1378
Bst6I CTCTTC 3 cut(s) 84, 999, 1338
BstAPI GCANNNNNTGC 1 cut(s) 1217
BstAUI TGTACA 3 cut(s) 526, 555, 1474
BstC8I GCNNGC 4 cut(s) 42, 46, 470, 1452
BstDEI CTNAG 4 cut(s) 660, 720, 982, 1269
BstDSI CCRYGG 2 cut(s) 69, 1230
BstEII GGTNACC 1 cut(s) 1253
BstF5I GGATG 1 cut(s) 1411
BstKTI GATC 5 cut(s) 95, 253, 640, 1074, 1122
BstMAI GTCTC 1 cut(s) 1001
BstMBI GATC 5 cut(s) 92, 250, 637, 1071, 1119
BstMWI GCNNNNNNNGC 6 cut(s) 403, 725, 951, 1217, 1460, 1469
BstNI CCWGG 3 cut(s) 624, 669, 916
BstNSI RCATGY 2 cut(s) 349, 499
BstPI GGTNACC 1 cut(s) 1253
BstSCI CCNGG 4 cut(s) 266, 622, 667, 914
BstSLI GKGCMC 1 cut(s) 1135
BstV1I GCAGC 2 cut(s) 384, 728
BstV2I GAAGAC 1 cut(s) 1355
BstX2I RGATCY 1 cut(s) 92
BstXI CCANNNNNNTGG 3 cut(s) 1026, 1166, 1332
BstYI RGATCY 1 cut(s) 92
BsuRI GGCC 6 cut(s) 137, 144, 1018, 1113, 1235, 1243
BtgI CCRYGG 2 cut(s) 69, 1230
BtsCI GGATG 1 cut(s) 1411
BtsI GCAGTG 1 cut(s) 182
BtsIMutI CAGTG 3 cut(s) 182, 899, 1325
Cac8I GCNNGC 4 cut(s) 42, 46, 470, 1452
Cfr13I GGNCC 3 cut(s) 136, 671, 827
Csp6I GTAC 8 cut(s) 506, 527, 556, 610, 787, 874, 1031, 1475
CviQI GTAC 8 cut(s) 506, 527, 556, 610, 787, 874, 1031, 1475
DdeI CTNAG 4 cut(s) 660, 720, 982, 1269
DpnI GATC 5 cut(s) 94, 252, 639, 1073, 1121
DpnII GATC 5 cut(s) 92, 250, 637, 1071, 1119
DraIII CACNNNGTG 1 cut(s) 1187
EaeI YGGCCR 2 cut(s) 1233, 1241
Eam1104I CTCTTC 3 cut(s) 84, 999, 1338
EarI CTCTTC 3 cut(s) 84, 999, 1338
Ecl136II GAGCTC 1 cut(s) 430
Eco130I CCWWGG 5 cut(s) 69, 139, 509, 946, 1230
Eco147I AGGCCT 1 cut(s) 1113
Eco24I GRGCYC 1 cut(s) 432
Eco47I GGWCC 2 cut(s) 671, 827
Eco53kI GAGCTC 1 cut(s) 430
Eco57I CTGAAG 1 cut(s) 314
Eco91I GGTNACC 1 cut(s) 1253
EcoICRI GAGCTC 1 cut(s) 430
EcoO65I GGTNACC 1 cut(s) 1253
EcoRI GAATTC 1 cut(s) 761
EcoRII CCWGG 3 cut(s) 622, 667, 914
EcoT14I CCWWGG 5 cut(s) 69, 139, 509, 946, 1230
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 432
ErhI CCWWGG 5 cut(s) 69, 139, 509, 946, 1230
FalI AAGNNNNNCTT 4 cut(s) 28, 60, 255, 287
FauNDI CATATG 1 cut(s) 775
FbaI TGATCA 1 cut(s) 1119
Fnu4HI GCNGC 3 cut(s) 228, 398, 717
FokI GGATG 1 cut(s) 1418
FriOI GRGCYC 1 cut(s) 432
Fsp4HI GCNGC 3 cut(s) 228, 398, 717
FspBI CTAG 2 cut(s) 171, 365
GluI GCNGC 3 cut(s) 228, 398, 717
GsaI CCCAGC 2 cut(s) 109, 1224
GsuI CTGGAG 2 cut(s) 838, 1188
HaeIII GGCC 6 cut(s) 137, 144, 1018, 1113, 1235, 1243
HapII CCGG 2 cut(s) 267, 323
HinfI GANTC 3 cut(s) 151, 602, 911
HpaII CCGG 2 cut(s) 267, 323
HphI GGTGA 4 cut(s) 6, 202, 348, 1265
Hpy188I TCNGA 6 cut(s) 601, 607, 663, 707, 966, 1293
Hpy188III TCNNGA 4 cut(s) 584, 817, 1075, 1205
HpyAV CCTTC 9 cut(s) 363, 379, 685, 981, 1034, 1375, 1403, 1425, 1475
HpyCH4III ACNGT 3 cut(s) 737, 1288, 1378
HpyF10VI GCNNNNNNNGC 6 cut(s) 403, 725, 951, 1217, 1460, 1469
HpyF3I CTNAG 4 cut(s) 660, 720, 982, 1269
Ksp22I TGATCA 1 cut(s) 1119
Kzo9I GATC 5 cut(s) 92, 250, 637, 1071, 1119
LmnI GCTCC 3 cut(s) 713, 770, 1447
Lsp1109I GCAGC 2 cut(s) 384, 728
LweI GCATC 3 cut(s) 20, 957, 1282
MaeI CTAG 2 cut(s) 171, 365
MaeIII GTNAC 9 cut(s) 193, 348, 592, 649, 745, 842, 1152, 1253, 1282
MalI GATC 5 cut(s) 94, 252, 639, 1073, 1121
MboI GATC 5 cut(s) 92, 250, 637, 1071, 1119
MboII GAAGA 6 cut(s) 71, 770, 1016, 1268, 1355, 1360
MfeI CAATTG 1 cut(s) 879
MflI RGATCY 1 cut(s) 92
MhlI GDGCHC 3 cut(s) 432, 936, 1135
MlsI TGGCCA 2 cut(s) 1235, 1243
MluNI TGGCCA 2 cut(s) 1235, 1243
Mox20I TGGCCA 2 cut(s) 1235, 1243
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 4 cut(s) 78, 419, 695, 1195
MscI TGGCCA 2 cut(s) 1235, 1243
MseI TTAA 2 cut(s) 780, 1400
MslI CAYNNNNRTG 1 cut(s) 547
Msp20I TGGCCA 2 cut(s) 1235, 1243
MspA1I CMGCKG 1 cut(s) 719
MspI CCGG 2 cut(s) 267, 323
MspR9I CCNGG 4 cut(s) 268, 624, 669, 916
MunI CAATTG 1 cut(s) 879
Mva1269I GAATGC 2 cut(s) 48, 799
MvaI CCWGG 3 cut(s) 624, 669, 916
MwoI GCNNNNNNNGC 6 cut(s) 403, 725, 951, 1217, 1460, 1469
NciI CCSGG 1 cut(s) 268
NcoI CCATGG 2 cut(s) 69, 1230
NdeI CATATG 1 cut(s) 775
NdeII GATC 5 cut(s) 92, 250, 637, 1071, 1119
NlaIV GGNNCC 6 cut(s) 94, 739, 921, 1134, 1227, 1317
NmuCI GTSAC 4 cut(s) 745, 1152, 1253, 1282
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 349, 499
OliI CACNNNNGTG 1 cut(s) 547
PceI AGGCCT 1 cut(s) 1113
PciI ACATGT 2 cut(s) 345, 495
PcsI WCGNNNNNNNCGW 1 cut(s) 762
PctI GAATGC 2 cut(s) 48, 799
PdmI GAANNNNTTC 4 cut(s) 78, 419, 695, 1195
PfeI GAWTC 3 cut(s) 151, 602, 911
PflMI CCANNNNNTGG 1 cut(s) 1250
PkrI GCNGC 3 cut(s) 229, 399, 718
PscI ACATGT 2 cut(s) 345, 495
PshBI ATTAAT 1 cut(s) 1400
PsiI TTATAA 1 cut(s) 1178
Psp124BI GAGCTC 1 cut(s) 432
Psp6I CCWGG 3 cut(s) 622, 667, 914
PspEI GGTNACC 1 cut(s) 1253
PspFI CCCAGC 2 cut(s) 105, 1220
PspGI CCWGG 3 cut(s) 622, 667, 914
PspN4I GGNNCC 6 cut(s) 94, 739, 921, 1134, 1227, 1317
PspPI GGNCC 3 cut(s) 136, 671, 827
PsuI RGATCY 1 cut(s) 92
PvuII CAGCTG 1 cut(s) 719
RsaI GTAC 8 cut(s) 507, 528, 557, 611, 788, 875, 1032, 1476
RsaNI GTAC 8 cut(s) 506, 527, 556, 610, 787, 874, 1031, 1475
RseI CAYNNNNRTG 1 cut(s) 547
SacI GAGCTC 1 cut(s) 432
SaqAI TTAA 2 cut(s) 780, 1400
SatI GCNGC 3 cut(s) 228, 398, 717
Sau3AI GATC 5 cut(s) 92, 250, 637, 1071, 1119
Sau96I GGNCC 3 cut(s) 136, 671, 827
ScaI AGTACT 2 cut(s) 611, 875
ScrFI CCNGG 4 cut(s) 268, 624, 669, 916
SduI GDGCHC 3 cut(s) 432, 936, 1135
SfaNI GCATC 3 cut(s) 20, 957, 1282
SinI GGWCC 2 cut(s) 671, 827
SmiMI CAYNNNNRTG 1 cut(s) 547
SmlI CTYRAG 2 cut(s) 584, 1137
SmoI CTYRAG 2 cut(s) 584, 1137
SseBI AGGCCT 1 cut(s) 1113
SsiI CCGC 1 cut(s) 228
SspI AATATT 1 cut(s) 1398
SspMI CTAG 2 cut(s) 171, 365
SstI GAGCTC 1 cut(s) 432
StuI AGGCCT 1 cut(s) 1113
StyD4I CCNGG 4 cut(s) 266, 622, 667, 914
StyI CCWWGG 5 cut(s) 69, 139, 509, 946, 1230
TaaI ACNGT 3 cut(s) 737, 1288, 1378
TaqI TCGA 6 cut(s) 261, 280, 288, 342, 645, 765
TatI WGTACW 6 cut(s) 526, 555, 609, 786, 873, 1474
TauI GCSGC 1 cut(s) 230
TfiI GAWTC 3 cut(s) 151, 602, 911
Tru1I TTAA 2 cut(s) 780, 1400
Tru9I TTAA 2 cut(s) 780, 1400
TscAI CASTG 3 cut(s) 189, 899, 1332
TseFI GTSAC 4 cut(s) 745, 1152, 1253, 1282
TseI GCWGC 2 cut(s) 397, 716
Tsp45I GTSAC 4 cut(s) 745, 1152, 1253, 1282
TspDTI ATGAA 6 cut(s) 71, 560, 1188, 1422, 1479, 1516
TspRI CASTG 3 cut(s) 189, 899, 1332
Van91I CCANNNNNTGG 1 cut(s) 1250
VpaK11BI GGWCC 2 cut(s) 671, 827
VspI ATTAAT 1 cut(s) 1400
XapI RAATTY 2 cut(s) 276, 761
XceI RCATGY 2 cut(s) 349, 499
XmnI GAANNNNTTC 4 cut(s) 78, 419, 695, 1195
XspI CTAG 2 cut(s) 171, 365
ZrmI AGTACT 2 cut(s) 611, 875
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.