RLG00000024207

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
33082783 .. 33083106
324 bp
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UTR
Exon/CDS
Intron
RLM00000024207

Sequence Viewer

Length: 324 bp
ATGGCTTCTCAAAACCCCCAGCTTCACTTTGTCTTGTTTCCATTTATGGCTCAAGGTCACATGATCCCAATGATAGATATTGCTAGAATTCTGGCACAGCGAGGCGTGATGATCACCACAGTCACCACACCACATAATGGTGCTCGTTTTCAAACAGTTCTTGCTCGTGCCATAGAATCTGGGCTCCAAATCCGATTAGTCCAACTGAAATTTCCATGTGAAGAAGCAGGACTACCTGATGGGTGTGAAAACCTTGAGATGCTACCTTCACAAGACTTGGCCTTGAATTTCTTACAGGAACTGCGGTGCTACAACTGCCAGTAG

Protein Analysis

108

Amino Acids

12.01

Weight (kDa)

5.82

Isoelectric Point (pI)

42.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 137
AciI CCGC 1 cut(s) 304
AclWI GGATC 1 cut(s) 58
AcsI RAATTY 3 cut(s) 87, 209, 286
AfiI CCNNNNNNNGG 1 cut(s) 137
AgsI TTSAA 2 cut(s) 152, 286
AjuI GAANNNNNNNTTGG 2 cut(s) 195, 227
AluBI AGCT 1 cut(s) 22
AluI AGCT 1 cut(s) 22
Alw21I GWGCWC 1 cut(s) 145
AlwI GGATC 1 cut(s) 58
AlwNI CAGNNNCTG 1 cut(s) 301
AoxI GGCC 1 cut(s) 279
ApoI RAATTY 3 cut(s) 87, 209, 286
AsuHPI GGTGA 2 cut(s) 106, 115
BanII GRGCYC 1 cut(s) 186
BarI GAAGNNNNNNTAC 2 cut(s) 216, 248
BauI CACGAG 1 cut(s) 165
Bbv12I GWGCWC 1 cut(s) 145
BccI CCATC 1 cut(s) 233
BclI TGATCA 1 cut(s) 111
BfaI CTAG 1 cut(s) 84
BmiI GGNNCC 1 cut(s) 185
BmsI GCATC 1 cut(s) 249
BpuEI CTTGAG 2 cut(s) 36, 275
Bsc4I CCNNNNNNNGG 1 cut(s) 137
Bse1I ACTGG 1 cut(s) 319
BseLI CCNNNNNNNGG 1 cut(s) 137
BseNI ACTGG 1 cut(s) 319
BseYI CCCAGC 1 cut(s) 18
BshFI GGCC 1 cut(s) 281
BsiHKAI GWGCWC 1 cut(s) 145
BslI CCNNNNNNNGG 1 cut(s) 137
BsnI GGCC 1 cut(s) 281
Bsp1286I GDGCHC 2 cut(s) 145, 186
Bsp143I GATC 2 cut(s) 63, 111
BspACI CCGC 1 cut(s) 304
BspANI GGCC 1 cut(s) 281
BspLI GGNNCC 1 cut(s) 185
BspPI GGATC 1 cut(s) 58
BsrI ACTGG 1 cut(s) 319
BssMI GATC 2 cut(s) 63, 111
BssSI CACGAG 1 cut(s) 165
Bst2BI CACGAG 1 cut(s) 165
Bst4CI ACNGT 2 cut(s) 121, 157
BstKTI GATC 2 cut(s) 66, 114
BstMBI GATC 2 cut(s) 63, 111
BstMWI GCNNNNNNNGC 1 cut(s) 315
BsuRI GGCC 1 cut(s) 281
CaiI CAGNNNCTG 1 cut(s) 301
CviAII CATG 2 cut(s) 61, 216
CviJI RGCY 5 cut(s) 5, 22, 50, 184, 281
CviKI_1 RGCY 5 cut(s) 5, 22, 50, 184, 281
DpnI GATC 2 cut(s) 65, 113
DpnII GATC 2 cut(s) 63, 111
Eco24I GRGCYC 1 cut(s) 186
EcoRI GAATTC 1 cut(s) 87
EcoT38I GRGCYC 1 cut(s) 186
FaeI CATG 2 cut(s) 64, 219
FaiI YATR 5 cut(s) 47, 62, 135, 173, 217
FatI CATG 2 cut(s) 60, 215
FbaI TGATCA 1 cut(s) 111
FriOI GRGCYC 1 cut(s) 186
FspBI CTAG 1 cut(s) 84
GsaI CCCAGC 1 cut(s) 22
HaeIII GGCC 1 cut(s) 281
Hin1II CATG 2 cut(s) 64, 219
HinfI GANTC 1 cut(s) 176
HphI GGTGA 2 cut(s) 106, 115
Hpy188I TCNGA 1 cut(s) 194
HpyAV CCTTC 1 cut(s) 276
HpyCH4III ACNGT 2 cut(s) 121, 157
HpyF10VI GCNNNNNNNGC 1 cut(s) 315
Hsp92II CATG 2 cut(s) 64, 219
Ksp22I TGATCA 1 cut(s) 111
Kzo9I GATC 2 cut(s) 63, 111
LmnI GCTCC 1 cut(s) 189
LpnPI CCDG 6 cut(s) 32, 77, 165, 213, 249, 281
LweI GCATC 1 cut(s) 249
MaeI CTAG 1 cut(s) 84
MaeIII GTNAC 2 cut(s) 56, 121
MalI GATC 2 cut(s) 65, 113
MboI GATC 2 cut(s) 63, 111
MboII GAAGA 1 cut(s) 233
MhlI GDGCHC 2 cut(s) 145, 186
MluCI AATT 3 cut(s) 87, 209, 286
MmeI TCCRAC 1 cut(s) 226
MnlI CCTC 1 cut(s) 95
MslI CAYNNNNRTG 1 cut(s) 138
MwoI GCNNNNNNNGC 1 cut(s) 315
NdeII GATC 2 cut(s) 63, 111
NlaIII CATG 2 cut(s) 64, 219
NlaIV GGNNCC 1 cut(s) 185
NmuCI GTSAC 2 cut(s) 56, 121
PfeI GAWTC 1 cut(s) 176
PflMI CCANNNNNTGG 1 cut(s) 137
PspFI CCCAGC 1 cut(s) 18
PspN4I GGNNCC 1 cut(s) 185
PstNI CAGNNNCTG 1 cut(s) 301
RseI CAYNNNNRTG 1 cut(s) 138
Sau3AI GATC 2 cut(s) 63, 111
SduI GDGCHC 2 cut(s) 145, 186
SetI ASST 5 cut(s) 24, 58, 238, 255, 268
SfaNI GCATC 1 cut(s) 249
SmiMI CAYNNNNRTG 1 cut(s) 138
SmlI CTYRAG 2 cut(s) 51, 254
SmoI CTYRAG 2 cut(s) 51, 254
Sse9I AATT 3 cut(s) 87, 209, 286
SsiI CCGC 1 cut(s) 304
SspMI CTAG 1 cut(s) 84
TaaI ACNGT 2 cut(s) 121, 157
TasI AATT 3 cut(s) 87, 209, 286
TfiI GAWTC 1 cut(s) 176
TseFI GTSAC 2 cut(s) 56, 121
Tsp45I GTSAC 2 cut(s) 56, 121
Van91I CCANNNNNTGG 1 cut(s) 137
XapI RAATTY 3 cut(s) 87, 209, 286
XspI CTAG 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.