Rmu_sc0000839.1_g000005

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000839.1
Physical Location & Seq
Reverse (-)
9172 .. 10638
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000839.1_g000005.1.cds

Sequence Viewer

Length: 1467 bp
atggcttctcaggaatgccagcttcactttgtcttgtttccttttatggcccaaggccacatgattccaatggtagacattgctagaatgcttgcacaacacggggtggctatcaccatagtcaccacaccacttaatgcagctcgtttcgaaacagttcttactcgcgccaaaaaatcggggcaccaaatccggttgatccagctgaaatttccatctgaaggagctgggttgcctcatggttgtgagaacttggacatgataccttccaacttggcctcaaatttcttcagtgcaaccaaaaggctacaagagccggtagagaaactgtttgaagagctgacccccagaccaagttgtatcatctcagacatgtgcttgccatggacaattaacatctctcgcatgtttaacattccacggatatctttcagtggaacgtgttgctttttcctcttatgttttagcaaagtcggcatatctaaggttcttgatgatataacctctgaggaggagtactttgtcctgcctgacttgccagatcgcattgaggtgaccaaggctcagctgccggcaacccatgcatcaaacatggaagattttaatgaagctttgcttgcagctgagatggcctcatatgggataattatgaatagctttgaagagttggagccagcatatgttaaagaatacaagaaggtaaagaaagataaagtatggtgtgttggccctgcatcattatgcaacaaagatgacttggataaggcacaaagaggtaacaaggcctcggtgaatgaacattactgcttgaagtggcttgattcttgggaagcaagctcagtgctctatgcttgctttggaagtttatgtaatctcatacctgcacaactcatagaacttggattgggactagaggcatccaataaaccattcatttgggctgtgaggagcagtagtcagtcagaggaattggaaaagtggataacagagaacggatttgaggaaaggaccaaaggaaggggcctgctgatttggggttgggctccgcagacactaatactatcacaccctgcagttgggggtttcttaacacattgtggttggaactctatattagaagggatatgtgctggggtgcctttgattacatggccattgttcggagaccaattcttcgatgagaaactagtagtgcagattctaaagattgcggtgagagttggggtggagtatccgatgaagtggggagaggaggaaagtattggggtgttggtgaaaaaggaaaatgtgaaggaagcgatagacaagttgctggatggagaagaaagccaagcgcgaagagatagagccagagagcttgctaaattgtcaaagagagcagtagaagaagggggatcttctcacctcaacattgaactactaatccatgatatcatgcaacaaggaaattgcacagagagaaaataa

Protein Analysis

488

Amino Acids

54.71

Weight (kDa)

5.54

Isoelectric Point (pI)

43.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 889
AccB1I GGYRCC 2 cut(s) 183, 1135
AccI GTMKAC 1 cut(s) 75
AccII CGCG 2 cut(s) 168, 1336
AciI CCGC 2 cut(s) 1046, 1211
AclWI GGATC 2 cut(s) 193, 1402
AcoI YGGCCR 1 cut(s) 1151
AcsI RAATTY 2 cut(s) 209, 283
AcuI CTGAAG 2 cut(s) 240, 274
AdeI CACNNNGTG 2 cut(s) 106, 1097
AfaI GTAC 1 cut(s) 518
AfiI CCNNNNNNNGG 5 cut(s) 221, 639, 1017, 1076, 1160
AflIII ACRYGT 2 cut(s) 372, 440
AgsI TTSAA 4 cut(s) 335, 662, 811, 1415
AhlI ACTAGT 1 cut(s) 1186
AjuI GAANNNNNNNTTGG 2 cut(s) 914, 946
AloI GAACNNNNNNTCC 2 cut(s) 1407, 1439
Alw21I GWGCWC 1 cut(s) 846
Alw26I GTCTC 1 cut(s) 1158
AlwI GGATC 2 cut(s) 193, 1402
AoxI GGCC 8 cut(s) 48, 55, 276, 630, 727, 783, 1021, 1151
ApeKI GCWGC 3 cut(s) 140, 568, 620
ApoI RAATTY 2 cut(s) 209, 283
ArsI GACNNNNNNTTYG 2 cut(s) 1157, 1189
Asp700I GAANNNNTTC 1 cut(s) 156
AspLEI GCGC 2 cut(s) 170, 1336
AspS9I GGNCC 4 cut(s) 49, 728, 1008, 1021
AsuHPI GGTGA 7 cut(s) 106, 115, 565, 802, 1225, 1285, 1394
AsuII TTCGAA 1 cut(s) 150
AvaII GGWCC 1 cut(s) 1008
BaeGI GKGCMC 1 cut(s) 186
BalI TGGCCA 1 cut(s) 1153
BanI GGYRCC 2 cut(s) 183, 1135
BanII GRGCYC 1 cut(s) 1045
Bbv12I GWGCWC 1 cut(s) 846
BbvI GCAGC 3 cut(s) 152, 555, 632
BccI CCATC 3 cut(s) 223, 622, 1310
BciVI GTATCC 1 cut(s) 1242
BcoDI GTCTC 1 cut(s) 1158
BcuI ACTAGT 1 cut(s) 1186
BfaI CTAG 3 cut(s) 84, 911, 1187
BfmI CTRYAG 1 cut(s) 1071
BfuAI ACCTGC 1 cut(s) 889
BfuI GTATCC 1 cut(s) 1242
BisI GCNGC 3 cut(s) 141, 569, 621
BlpI GCTNAGC 1 cut(s) 564
BlsI GCNGC 3 cut(s) 142, 570, 622
BmcAI AGTACT 1 cut(s) 518
Bme18I GGWCC 1 cut(s) 1008
BmgT120I GGNCC 4 cut(s) 49, 728, 1008, 1021
BmiI GGNNCC 5 cut(s) 185, 672, 1022, 1044, 1137
BmsI GCATC 3 cut(s) 593, 743, 926
BplI GAGNNNNNCTC 2 cut(s) 617, 649
Bpu1102I GCTNAGC 1 cut(s) 564
Bpu14I TTCGAA 1 cut(s) 150
BsaI GGTCTC 1 cut(s) 1158
BsaJI CCNNGG 5 cut(s) 52, 383, 419, 558, 786
BsaWI WCCGGW 1 cut(s) 192
BsaXI ACNNNNNCTCC 2 cut(s) 940, 970
Bsc4I CCNNNNNNNGG 5 cut(s) 221, 639, 1017, 1076, 1160
Bse118I RCCGGY 2 cut(s) 316, 571
Bse3DI GCAATG 1 cut(s) 78
BseDI CCNNGG 5 cut(s) 52, 383, 419, 558, 786
BseGI GGATG 2 cut(s) 917, 1321
BseLI CCNNNNNNNGG 5 cut(s) 221, 639, 1017, 1076, 1160
BseMI GCAATG 1 cut(s) 78
BseMII CTCAG 6 cut(s) 23, 381, 498, 578, 615, 852
BseRI GAGGAG 4 cut(s) 524, 527, 961, 1265
BseSI GKGCMC 1 cut(s) 186
BseXI GCAGC 3 cut(s) 152, 555, 632
BseYI CCCAGC 2 cut(s) 227, 1130
BsgI GTGCAG 2 cut(s) 867, 1214
Bsh1236I CGCG 2 cut(s) 168, 1336
BshFI GGCC 8 cut(s) 50, 57, 278, 632, 729, 785, 1023, 1153
BshNI GGYRCC 2 cut(s) 183, 1135
BsiHKAI GWGCWC 1 cut(s) 846
BsiSI CCGG 3 cut(s) 193, 317, 572
BslFI GGGAC 1 cut(s) 921
BslI CCNNNNNNNGG 5 cut(s) 221, 639, 1017, 1076, 1160
BsmAI GTCTC 1 cut(s) 1158
BsmFI GGGAC 1 cut(s) 921
BsmI GAATGC 2 cut(s) 20, 93
BsnI GGCC 8 cut(s) 50, 57, 278, 632, 729, 785, 1023, 1153
Bso31I GGTCTC 1 cut(s) 1158
Bsp119I TTCGAA 1 cut(s) 150
Bsp1286I GDGCHC 3 cut(s) 186, 846, 1045
Bsp143I GATC 3 cut(s) 198, 541, 1394
Bsp1720I GCTNAGC 1 cut(s) 564
Bsp19I CCATGG 1 cut(s) 383
BspACI CCGC 2 cut(s) 1046, 1211
BspANI GGCC 8 cut(s) 50, 57, 278, 632, 729, 785, 1023, 1153
BspCNI CTCAG 6 cut(s) 22, 380, 499, 577, 616, 851
BspFNI CGCG 2 cut(s) 168, 1336
BspLI GGNNCC 5 cut(s) 185, 672, 1022, 1044, 1137
BspMAI CTGCAG 1 cut(s) 1075
BspMI ACCTGC 1 cut(s) 889
BspPI GGATC 2 cut(s) 193, 1402
BspQI GCTCTTC 1 cut(s) 330
BspT104I TTCGAA 1 cut(s) 150
BspT107I GGYRCC 2 cut(s) 183, 1135
BspTNI GGTCTC 1 cut(s) 1158
BsrDI GCAATG 1 cut(s) 78
BsrFI RCCGGY 2 cut(s) 316, 571
BssAI RCCGGY 2 cut(s) 316, 571
BssECI CCNNGG 5 cut(s) 52, 383, 419, 558, 786
BssMI GATC 3 cut(s) 198, 541, 1394
BssT1I CCWWGG 3 cut(s) 52, 383, 558
Bst4CI ACNGT 2 cut(s) 157, 330
Bst6I CTCTTC 3 cut(s) 330, 657, 1333
BstAPI GCANNNNNTGC 1 cut(s) 581
BstBI TTCGAA 1 cut(s) 150
BstDEI CTNAG 7 cut(s) 9, 367, 483, 507, 564, 624, 838
BstDSI CCRYGG 2 cut(s) 383, 419
BstEII GGTNACC 1 cut(s) 553
BstF5I GGATG 2 cut(s) 917, 1321
BstFNI CGCG 2 cut(s) 168, 1336
BstHHI GCGC 2 cut(s) 170, 1336
BstKTI GATC 3 cut(s) 201, 544, 1397
BstMAI GTCTC 1 cut(s) 1158
BstMBI GATC 3 cut(s) 198, 541, 1394
BstMWI GCNNNNNNNGC 6 cut(s) 313, 474, 535, 581, 617, 629
BstNSI RCATGY 2 cut(s) 376, 409
BstPI GGTNACC 1 cut(s) 553
BstSFI CTRYAG 1 cut(s) 1071
BstSLI GKGCMC 1 cut(s) 186
BstUI CGCG 2 cut(s) 168, 1336
BstV1I GCAGC 3 cut(s) 152, 555, 632
BstX2I RGATCY 1 cut(s) 1394
BstXI CCANNNNNNTGG 1 cut(s) 936
BstYI RGATCY 1 cut(s) 1394
BsuI GTATCC 1 cut(s) 1242
BsuRI GGCC 8 cut(s) 50, 57, 278, 632, 729, 785, 1023, 1153
BtgI CCRYGG 2 cut(s) 383, 419
BtsCI GGATG 2 cut(s) 917, 1321
BtsIMutI CAGTG 3 cut(s) 298, 439, 846
BveI ACCTGC 1 cut(s) 889
CfoI GCGC 2 cut(s) 170, 1336
Cfr10I RCCGGY 2 cut(s) 316, 571
Cfr13I GGNCC 4 cut(s) 49, 728, 1008, 1021
Csp6I GTAC 1 cut(s) 517
CviQI GTAC 1 cut(s) 517
DdeI CTNAG 7 cut(s) 9, 367, 483, 507, 564, 624, 838
DpnI GATC 3 cut(s) 200, 543, 1396
DpnII GATC 3 cut(s) 198, 541, 1394
DraIII CACNNNGTG 2 cut(s) 106, 1097
EaeI YGGCCR 1 cut(s) 1151
Eam1104I CTCTTC 3 cut(s) 330, 657, 1333
EarI CTCTTC 3 cut(s) 330, 657, 1333
Eco130I CCWWGG 3 cut(s) 52, 383, 558
Eco147I AGGCCT 1 cut(s) 785
Eco24I GRGCYC 1 cut(s) 1045
Eco31I GGTCTC 1 cut(s) 1158
Eco32I GATATC 2 cut(s) 426, 1432
Eco47I GGWCC 1 cut(s) 1008
Eco57I CTGAAG 2 cut(s) 240, 274
Eco91I GGTNACC 1 cut(s) 553
EcoO109I RGGNCCY 1 cut(s) 1021
EcoO65I GGTNACC 1 cut(s) 553
EcoRV GATATC 2 cut(s) 426, 1432
EcoT14I CCWWGG 3 cut(s) 52, 383, 558
EcoT22I ATGCAT 1 cut(s) 586
EcoT38I GRGCYC 1 cut(s) 1045
ErhI CCWWGG 3 cut(s) 52, 383, 558
FalI AAGNNNNNCTT 2 cut(s) 600, 632
FaqI GGGAC 1 cut(s) 921
FauNDI CATATG 2 cut(s) 637, 679
FblI GTMKAC 1 cut(s) 75
Fnu4HI GCNGC 3 cut(s) 141, 569, 621
FokI GGATG 2 cut(s) 904, 1328
FriOI GRGCYC 1 cut(s) 1045
Fsp4HI GCNGC 3 cut(s) 141, 569, 621
FspBI CTAG 3 cut(s) 84, 911, 1187
GlaI GCGC 2 cut(s) 169, 1335
GluI GCNGC 3 cut(s) 141, 569, 621
GsaI CCCAGC 2 cut(s) 231, 1134
HaeIII GGCC 8 cut(s) 50, 57, 278, 632, 729, 785, 1023, 1153
HapII CCGG 3 cut(s) 193, 317, 572
HhaI GCGC 2 cut(s) 170, 1336
Hin6I GCGC 2 cut(s) 168, 1334
HinP1I GCGC 2 cut(s) 168, 1334
HindIII AAGCTT 1 cut(s) 609
HinfI GANTC 3 cut(s) 64, 821, 1198
HpaII CCGG 3 cut(s) 193, 317, 572
HphI GGTGA 7 cut(s) 106, 115, 565, 802, 1225, 1285, 1394
Hpy166II GTNNAC 1 cut(s) 76
Hpy188I TCNGA 6 cut(s) 220, 370, 508, 964, 1163, 1236
Hpy188III TCNNGA 2 cut(s) 11, 491
Hpy8I GTNNAC 1 cut(s) 76
HpyAV CCTTC 7 cut(s) 215, 276, 691, 1011, 1112, 1285, 1382
HpyCH4III ACNGT 2 cut(s) 157, 330
HpyCH4IV ACGT 1 cut(s) 440
HpyF10VI GCNNNNNNNGC 6 cut(s) 313, 474, 535, 581, 617, 629
HpyF3I CTNAG 7 cut(s) 9, 367, 483, 507, 564, 624, 838
HpySE526I ACGT 1 cut(s) 440
HspAI GCGC 2 cut(s) 168, 1334
KroI GCCGGC 1 cut(s) 571
KroNI GCCGGC 1 cut(s) 573
Kzo9I GATC 3 cut(s) 198, 541, 1394
LguI GCTCTTC 1 cut(s) 330
LmnI GCTCC 4 cut(s) 224, 670, 948, 1048
Lsp1109I GCAGC 3 cut(s) 152, 555, 632
LweI GCATC 3 cut(s) 593, 743, 926
MaeI CTAG 3 cut(s) 84, 911, 1187
MaeII ACGT 1 cut(s) 440
MaeIII GTNAC 3 cut(s) 121, 553, 776
MalI GATC 3 cut(s) 200, 543, 1396
MboI GATC 3 cut(s) 198, 541, 1394
MboII GAAGA 9 cut(s) 280, 347, 608, 674, 1165, 1334, 1350, 1389, 1397
MflI RGATCY 1 cut(s) 1394
MhlI GDGCHC 3 cut(s) 186, 846, 1045
MlsI TGGCCA 1 cut(s) 1153
MluCI AATT 8 cut(s) 209, 283, 390, 645, 968, 1169, 1364, 1447
MluNI TGGCCA 1 cut(s) 1153
MmeI TCCRAC 3 cut(s) 294, 648, 1082
Mox20I TGGCCA 1 cut(s) 1153
Mph1103I ATGCAT 1 cut(s) 586
MroNI GCCGGC 1 cut(s) 571
MroXI GAANNNNTTC 1 cut(s) 156
MscI TGGCCA 1 cut(s) 1153
MseI TTAA 6 cut(s) 135, 393, 411, 603, 684, 1088
MslI CAYNNNNRTG 3 cut(s) 243, 551, 739
Msp20I TGGCCA 1 cut(s) 1153
MspA1I CMGCKG 3 cut(s) 205, 568, 623
MspI CCGG 3 cut(s) 193, 317, 572
Mva1269I GAATGC 2 cut(s) 20, 93
MvnI CGCG 2 cut(s) 168, 1336
MwoI GCNNNNNNNGC 6 cut(s) 313, 474, 535, 581, 617, 629
NaeI GCCGGC 1 cut(s) 573
NcoI CCATGG 1 cut(s) 383
NdeI CATATG 2 cut(s) 637, 679
NdeII GATC 3 cut(s) 198, 541, 1394
NgoMIV GCCGGC 1 cut(s) 571
NlaIV GGNNCC 5 cut(s) 185, 672, 1022, 1044, 1137
NmuCI GTSAC 2 cut(s) 121, 553
NsiI ATGCAT 1 cut(s) 586
NspI RCATGY 2 cut(s) 376, 409
NspV TTCGAA 1 cut(s) 150
PceI AGGCCT 1 cut(s) 785
PciI ACATGT 1 cut(s) 372
PciSI GCTCTTC 1 cut(s) 330
PctI GAATGC 2 cut(s) 20, 93
PdiI GCCGGC 1 cut(s) 573
PdmI GAANNNNTTC 1 cut(s) 156
PfeI GAWTC 3 cut(s) 64, 821, 1198
PkrI GCNGC 3 cut(s) 142, 570, 622
PscI ACATGT 1 cut(s) 372
PspEI GGTNACC 1 cut(s) 553
PspFI CCCAGC 2 cut(s) 227, 1130
PspN4I GGNNCC 5 cut(s) 185, 672, 1022, 1044, 1137
PspPI GGNCC 4 cut(s) 49, 728, 1008, 1021
PstI CTGCAG 1 cut(s) 1075
PsuI RGATCY 1 cut(s) 1394
PvuII CAGCTG 3 cut(s) 205, 568, 623
RsaI GTAC 1 cut(s) 518
RsaNI GTAC 1 cut(s) 517
RseI CAYNNNNRTG 3 cut(s) 243, 551, 739
SapI GCTCTTC 1 cut(s) 330
SaqAI TTAA 6 cut(s) 135, 393, 411, 603, 684, 1088
SatI GCNGC 3 cut(s) 141, 569, 621
Sau3AI GATC 3 cut(s) 198, 541, 1394
Sau96I GGNCC 4 cut(s) 49, 728, 1008, 1021
ScaI AGTACT 1 cut(s) 518
SduI GDGCHC 3 cut(s) 186, 846, 1045
SfaNI GCATC 3 cut(s) 593, 743, 926
SfcI CTRYAG 1 cut(s) 1071
SfuI TTCGAA 1 cut(s) 150
SinI GGWCC 1 cut(s) 1008
SmiMI CAYNNNNRTG 3 cut(s) 243, 551, 739
SpeI ACTAGT 1 cut(s) 1186
Sse9I AATT 8 cut(s) 209, 283, 390, 645, 968, 1169, 1364, 1447
SseBI AGGCCT 1 cut(s) 785
SsiI CCGC 2 cut(s) 1046, 1211
SspMI CTAG 3 cut(s) 84, 911, 1187
StuI AGGCCT 1 cut(s) 785
StyI CCWWGG 3 cut(s) 52, 383, 558
TaaI ACNGT 2 cut(s) 157, 330
TaiI ACGT 1 cut(s) 443
TaqI TCGA 2 cut(s) 150, 1176
TasI AATT 8 cut(s) 209, 283, 390, 645, 968, 1169, 1364, 1447
TatI WGTACW 1 cut(s) 516
TfiI GAWTC 3 cut(s) 64, 821, 1198
Tru1I TTAA 6 cut(s) 135, 393, 411, 603, 684, 1088
Tru9I TTAA 6 cut(s) 135, 393, 411, 603, 684, 1088
TscAI CASTG 3 cut(s) 298, 439, 846
TseFI GTSAC 2 cut(s) 121, 553
TseI GCWGC 3 cut(s) 140, 568, 620
Tsp45I GTSAC 2 cut(s) 121, 553
TspDTI ATGAA 5 cut(s) 621, 665, 810, 922, 1253
TspGWI ACGGA 2 cut(s) 436, 1008
TspRI CASTG 3 cut(s) 298, 439, 846
VpaK11BI GGWCC 1 cut(s) 1008
XapI RAATTY 2 cut(s) 209, 283
XceI RCATGY 2 cut(s) 376, 409
XmiI GTMKAC 1 cut(s) 75
XmnI GAANNNNTTC 1 cut(s) 156
XspI CTAG 3 cut(s) 84, 911, 1187
ZrmI AGTACT 1 cut(s) 518
Zsp2I ATGCAT 1 cut(s) 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.