Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001852

Physical Location & Seq

Genomic Coordinates Reverse (-)

14653939 .. 14655348

Gene Structure 1410 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G124500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGCTTCAGGCCACATGATCCCATTGATAGACATTGCTAGATTGTTTGCACAACAAGGCATCATTGTCACCATATTCACCACACCCCACAATGCAACCCGATTTCAAGCAGTTCTTACTCGAGACCTAGAATCTAGTCTCCAAATCCGCATAATCCAAGTGAAATTTCCAGCCGAAGAAGTAGGATCGCCCGAAGGCTGCGAAAACTACGACATGCTACCTTCACCAAACTTGGTCGTCAATCTCTCTGCTGCAACTACCTTGCTTCACAAGCCAGTAGAGAAATTGTTTGAAGAGCTAACTCCAAAGCCAAACTGCATAATCTCAGACATGTGTTTAACATGGACAACCAGCATTGCCAGAAAGTATCACATTCCAAGGATATCTTTCTCTGGAAGAGGCTGCTTTTCTGACTTGTGCGTTCACAATTTGCGTGTATCCAACGTGCTTGAGAGTGTAACGTCTGATTCAGAGTACCTTGTTCTGCCCAACCTGCCTGATCGAATTGAGATGACGAAAGCTCAGCTTCCAGAGGGGACAGTGACAGCAAGACTGAAAGATTTTCTTGACAAAATAATAGCAACTGAGACTGAGACATATGCGATGATCATGAATACTTTTGAGGAATTGGAGCCAGCATATGTTCAAGCATACAAGGTAACAAAGGATAAACTCTGGTGCATTGGCCCTGCTTCCCTATGCAACAAGGATGACTTGGACAAGGCACAAAGAGGTAACAAGGTGTCCATTGATGAGCTTCATAGCTTCAAGTGGCTTGACTCAAGGGCACCAGCTTCTGTAATTTATGTTTGCCTTGGAAGTATGTGTAACCTCAGCTCTGAACAGTTGATAGAGATTGGATTGGCATTAGAGGTGTCGAATAAACCGTTCATTTGGGTTGTAAGGGGTTGCAATGAAACACAGGAATTGGAGAAGTGGATTGCAGAAAGTGGATTTGAGGAAAGGAATGAAGCAAGGAGCATCGTGATTCGGGGTTGGGCTCCGCAGACACTCATATTATCACACCCTGCAGTTGGTGGGTTCTTGACACATTGTGGCTGGAATTCCACATTGGAAGGGATTTGTGCTGGGGTGCCTTTGCTCACATGGCCAATGTTTGGGGACCAATTTCTGAATGAGAAACTTGTTGAACAGATTCTAAAGATTGCAGTGAGAGTTGGGGTGGAATTTCCAGTGAAATGGGGAGAGGAGGAGAAGATTAGGGTGGTGGTAAGAAAGGAAAAGGTGAAGGAGGCCATAGAGAAATTGATGGACGGAGAAGAAAGCCAAGGGAGAAGAGAGAGAGCCAGAGAGTTAGCAGAGATGGCAAAGAGAGCGGTAGCAGAAGGTGGATCTTCTGACCTCAACATTAAACAGCTAATCCAAGAGATCAAAGAACTAACTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0006629 GO:0008150 GO:0008152 GO:0008194 GO:0008202 GO:0009058 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009607 GO:0009628 GO:0009636 GO:0009812 GO:0009813 GO:0010224 GO:0010817 GO:0016128 GO:0016131 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0042221 GO:0042440 GO:0042445 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044464 GO:0046148 GO:0046527 GO:0050403 GO:0050502 GO:0050896 GO:0051552 GO:0051553 GO:0051554 GO:0051555 GO:0051704 GO:0051707 GO:0065007 GO:0065008 GO:0071704 GO:0080043 GO:0080044 GO:0080046 GO:0098754 GO:1901360 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko01110 map01110

Pfam Domains

Protein Families

UDPGT

Protein Analysis

470

Amino Acids

52.59

Weight (kDa)

5.38

Isoelectric Point (pI)

41.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001852)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36750 AT2G36760 AT2G36770 AT2G36780 AT2G36790 AT2G36800 AT3G53160
fragaria_vesca	FvH4_6g13320 FvH4_6g17020 FvH4_6g17030 FvH4_6g17063
malus_domestica	MD12G1104300.v1.1 MD12G1104800.v1.1
prunus_persica	Prupe.7G124200_v2.0.a1 Prupe.7G124300_v2.0.a1 Prupe.7G124400_v2.0.a1 Prupe.7G124500_v2.0.a1 Prupe.7G124600_v2.0.a1
pyrus_communis	pycom12g10290 pycom12g10300
rosa_chinensis	RchiOBHm_Chr3g0466191 RchiOBHm_Chr3g0471011 RchiOBHm_Chr3g0471051 RchiOBHm_Chr3g0471071 RchiOBHm_Chr3g0471081
rosa_laevigata	RLG00000024207 RLG00000024208 RLG00000024209 RLG00000024598
rosa_multiflora	Rmu_sc0000350.1_g000005 Rmu_sc0000839.1_g000004 Rmu_sc0000839.1_g000005 Rmu_sc0000839.1_g000006 Rmu_sc0016760.1_g000001
rosa_roxburghii	Rroxscaffold_6G00410310
rosa_rugosa	Rorug03G0079900 Rorug03G0114900 Rorug03G0115000 Rorug03G0115100 Rorug03G0115200
rosa_samantha	Rh6DG066500
rosa_wichuraiana	Rw3G011920 Rw3G015460 Rw3G015470 Rw3G015480 Rw3G015490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	501
AccB1I	GGYRCC	2 cut(s)	787, 1093
AccB7I	CCANNNNNTGG	1 cut(s)	1118
AccBSI	CCGCTC	1 cut(s)	1337
AciI	CCGC	3 cut(s)	148, 1004, 1337
AclWI	GGATC	3 cut(s)	13, 193, 1360
AcoI	YGGCCR	1 cut(s)	1109
AcsI	RAATTY	3 cut(s)	164, 1063, 1187
AdeI	CACNNNGTG	1 cut(s)	1055
AfaI	GTAC	1 cut(s)	476
AfiI	CCNNNNNNNGG	2 cut(s)	1034, 1118
AflIII	ACRYGT	1 cut(s)	330
AgsI	TTSAA	5 cut(s)	107, 293, 647, 769, 1151
AjuI	GAANNNNNNNTTGG	4 cut(s)	150, 182, 1055, 1087
AluBI	AGCT	8 cut(s)	298, 521, 526, 757, 765, 794, 837, 1378
AluI	AGCT	8 cut(s)	298, 521, 526, 757, 765, 794, 837, 1378
Alw26I	GTCTC	4 cut(s)	117, 143, 581, 587
AlwI	GGATC	3 cut(s)	13, 193, 1360
AlwNI	CAGNNNCTG	1 cut(s)	797
Ama87I	CYCGRG	1 cut(s)	120
AoxI	GGCC	4 cut(s)	10, 685, 1109, 1254
ApeKI	GCWGC	3 cut(s)	198, 251, 402
ApoI	RAATTY	3 cut(s)	164, 1063, 1187
Asp700I	GAANNNNTTC	1 cut(s)	1155
AspS9I	GGNCC	2 cut(s)	686, 1123
AsuHPI	GGTGA	4 cut(s)	61, 70, 216, 1258
AvaI	CYCGRG	1 cut(s)	120
AvaII	GGWCC	1 cut(s)	1123
BaeGI	GKGCMC	1 cut(s)	790
BalI	TGGCCA	1 cut(s)	1111
BanI	GGYRCC	2 cut(s)	787, 1093
BanII	GRGCYC	1 cut(s)	1003
BbvCI	CCTCAGC	1 cut(s)	833
BbvI	GCAGC	3 cut(s)	185, 238, 389
BccI	CCATC	2 cut(s)	1264, 1318
BciVI	GTATCC	1 cut(s)	448
BclI	TGATCA	1 cut(s)	606
BcoDI	GTCTC	4 cut(s)	117, 143, 581, 587
BfaI	CTAG	3 cut(s)	39, 128, 135
BfmI	CTRYAG	1 cut(s)	1029
BfuAI	ACCTGC	1 cut(s)	501
BfuI	GTATCC	1 cut(s)	448
BisI	GCNGC	3 cut(s)	199, 252, 403
BlpI	GCTNAGC	1 cut(s)	522
BlsI	GCNGC	3 cut(s)	200, 253, 404
Bme18I	GGWCC	1 cut(s)	1123
BmeT110I	CYCGRG	1 cut(s)	120
BmgT120I	GGNCC	2 cut(s)	686, 1123
BmiI	GGNNCC	5 cut(s)	633, 789, 1002, 1095, 1124
BmsI	GCATC	2 cut(s)	69, 990
Bpu10I	CCTNAGC	1 cut(s)	833
Bpu1102I	GCTNAGC	1 cut(s)	522
BpuEI	CTTGAG	2 cut(s)	470, 766
BsaI	GGTCTC	1 cut(s)	117
BsaJI	CCNNGG	3 cut(s)	377, 814, 1288
Bsc4I	CCNNNNNNNGG	2 cut(s)	1034, 1118
Bse1I	ACTGG	2 cut(s)	275, 1193
Bse3DI	GCAATG	3 cut(s)	33, 354, 919
BseDI	CCNNGG	3 cut(s)	377, 814, 1288
BseGI	GGATG	1 cut(s)	715
BseLI	CCNNNNNNNGG	2 cut(s)	1034, 1118
BseMI	GCAATG	3 cut(s)	33, 354, 919
BseMII	CTCAG	5 cut(s)	339, 536, 576, 582, 847
BseNI	ACTGG	2 cut(s)	275, 1193
BseRI	GAGGAG	2 cut(s)	1223, 1226
BseSI	GKGCMC	1 cut(s)	790
BseXI	GCAGC	3 cut(s)	185, 238, 389
BseYI	CCCAGC	1 cut(s)	1088
BshFI	GGCC	4 cut(s)	12, 687, 1111, 1256
BshNI	GGYRCC	2 cut(s)	787, 1093
BsiHKCI	CYCGRG	1 cut(s)	120
BslFI	GGGAC	2 cut(s)	550, 1136
BslI	CCNNNNNNNGG	2 cut(s)	1034, 1118
BsmAI	GTCTC	4 cut(s)	117, 143, 581, 587
BsmFI	GGGAC	2 cut(s)	550, 1136
BsnI	GGCC	4 cut(s)	12, 687, 1111, 1256
Bso31I	GGTCTC	1 cut(s)	117
BsoBI	CYCGRG	1 cut(s)	120
Bsp1286I	GDGCHC	2 cut(s)	790, 1003
Bsp143I	GATC	6 cut(s)	18, 185, 499, 606, 1352, 1389
Bsp1720I	GCTNAGC	1 cut(s)	522
BspACI	CCGC	3 cut(s)	148, 1004, 1337
BspANI	GGCC	4 cut(s)	12, 687, 1111, 1256
BspCNI	CTCAG	5 cut(s)	338, 535, 577, 583, 846
BspHI	TCATGA	1 cut(s)	609
BspLI	GGNNCC	5 cut(s)	633, 789, 1002, 1095, 1124
BspMAI	CTGCAG	1 cut(s)	1033
BspMI	ACCTGC	1 cut(s)	501
BspPI	GGATC	3 cut(s)	13, 193, 1360
BspQI	GCTCTTC	1 cut(s)	288
BspT107I	GGYRCC	2 cut(s)	787, 1093
BspTNI	GGTCTC	1 cut(s)	117
BsrBI	CCGCTC	1 cut(s)	1337
BsrDI	GCAATG	3 cut(s)	33, 354, 919
BsrI	ACTGG	2 cut(s)	275, 1193
BssECI	CCNNGG	3 cut(s)	377, 814, 1288
BssMI	GATC	6 cut(s)	18, 185, 499, 606, 1352, 1389
BssT1I	CCWWGG	3 cut(s)	377, 814, 1288
Bst4CI	ACNGT	3 cut(s)	541, 846, 888
Bst6I	CTCTTC	3 cut(s)	288, 391, 1291
BstC8I	GCNNGC	1 cut(s)	636
BstDEI	CTNAG	5 cut(s)	325, 522, 585, 591, 833
BstF5I	GGATG	1 cut(s)	715
BstKTI	GATC	6 cut(s)	21, 188, 502, 609, 1355, 1392
BstMAI	GTCTC	4 cut(s)	117, 143, 581, 587
BstMBI	GATC	6 cut(s)	18, 185, 499, 606, 1352, 1389
BstMWI	GCNNNNNNNGC	5 cut(s)	271, 493, 1108, 1325, 1334
BstNSI	RCATGY	2 cut(s)	217, 334
BstSFI	CTRYAG	1 cut(s)	1029
BstSLI	GKGCMC	1 cut(s)	790
BstV1I	GCAGC	3 cut(s)	185, 238, 389
BstX2I	RGATCY	1 cut(s)	1352
BstXI	CCANNNNNNTGG	1 cut(s)	1200
BstYI	RGATCY	1 cut(s)	1352
BsuI	GTATCC	1 cut(s)	448
BsuRI	GGCC	4 cut(s)	12, 687, 1111, 1256
BtgZI	GCGATG	1 cut(s)	617
BtsCI	GGATG	1 cut(s)	715
BtsI	GCAGTG	1 cut(s)	1176
BtsIMutI	CAGTG	3 cut(s)	546, 1176, 1200
BveI	ACCTGC	1 cut(s)	501
Cac8I	GCNNGC	1 cut(s)	636
CaiI	CAGNNNCTG	1 cut(s)	797
CciI	TCATGA	1 cut(s)	609
Cfr13I	GGNCC	2 cut(s)	686, 1123
Csp6I	GTAC	1 cut(s)	475
CviAII	CATG	6 cut(s)	16, 214, 331, 342, 610, 1107
CviQI	GTAC	1 cut(s)	475
DdeI	CTNAG	5 cut(s)	325, 522, 585, 591, 833
DpnI	GATC	6 cut(s)	20, 187, 501, 608, 1354, 1391
DpnII	GATC	6 cut(s)	18, 185, 499, 606, 1352, 1389
DraIII	CACNNNGTG	1 cut(s)	1055
EaeI	YGGCCR	1 cut(s)	1109
Eam1104I	CTCTTC	3 cut(s)	288, 391, 1291
EarI	CTCTTC	3 cut(s)	288, 391, 1291
Eco130I	CCWWGG	3 cut(s)	377, 814, 1288
Eco24I	GRGCYC	1 cut(s)	1003
Eco31I	GGTCTC	1 cut(s)	117
Eco32I	GATATC	1 cut(s)	384
Eco47I	GGWCC	1 cut(s)	1123
Eco88I	CYCGRG	1 cut(s)	120
EcoRI	GAATTC	1 cut(s)	1063
EcoRV	GATATC	1 cut(s)	384
EcoT14I	CCWWGG	3 cut(s)	377, 814, 1288
EcoT38I	GRGCYC	1 cut(s)	1003
ErhI	CCWWGG	3 cut(s)	377, 814, 1288
FaeI	CATG	6 cut(s)	19, 217, 334, 345, 613, 1110
FaqI	GGGAC	2 cut(s)	550, 1136
FatI	CATG	6 cut(s)	15, 213, 330, 341, 609, 1106
FauNDI	CATATG	2 cut(s)	598, 640
FbaI	TGATCA	1 cut(s)	606
Fnu4HI	GCNGC	3 cut(s)	199, 252, 403
FokI	GGATG	1 cut(s)	722
FriOI	GRGCYC	1 cut(s)	1003
Fsp4HI	GCNGC	3 cut(s)	199, 252, 403
FspBI	CTAG	3 cut(s)	39, 128, 135
GluI	GCNGC	3 cut(s)	199, 252, 403
GsaI	CCCAGC	1 cut(s)	1092
HaeIII	GGCC	4 cut(s)	12, 687, 1111, 1256
Hin1II	CATG	6 cut(s)	19, 217, 334, 345, 613, 1110
HinfI	GANTC	5 cut(s)	131, 467, 779, 988, 1156
HphI	GGTGA	4 cut(s)	61, 70, 216, 1258
Hpy166II	GTNNAC	1 cut(s)	424
Hpy188I	TCNGA	7 cut(s)	328, 412, 466, 472, 841, 1134, 1360
Hpy188III	TCNNGA	7 cut(s)	122, 393, 530, 566, 610, 985, 1045
Hpy8I	GTNNAC	1 cut(s)	424
HpyAV	CCTTC	5 cut(s)	188, 231, 1070, 1243, 1340
HpyCH4III	ACNGT	3 cut(s)	541, 846, 888
HpyCH4IV	ACGT	2 cut(s)	444, 461
HpyF10VI	GCNNNNNNNGC	5 cut(s)	271, 493, 1108, 1325, 1334
HpyF3I	CTNAG	5 cut(s)	325, 522, 585, 591, 833
HpySE526I	ACGT	2 cut(s)	444, 461
Hsp92II	CATG	6 cut(s)	19, 217, 334, 345, 613, 1110
Ksp22I	TGATCA	1 cut(s)	606
Kzo9I	GATC	6 cut(s)	18, 185, 499, 606, 1352, 1389
LguI	GCTCTTC	1 cut(s)	288
LmnI	GCTCC	3 cut(s)	631, 978, 1006
Lsp1109I	GCAGC	3 cut(s)	185, 238, 389
LweI	GCATC	2 cut(s)	69, 990
MaeI	CTAG	3 cut(s)	39, 128, 135
MaeII	ACGT	2 cut(s)	444, 461
MaeIII	GTNAC	6 cut(s)	67, 457, 541, 658, 734, 827
MalI	GATC	6 cut(s)	20, 187, 501, 608, 1354, 1391
MbiI	CCGCTC	1 cut(s)	1337
MboI	GATC	6 cut(s)	18, 185, 499, 606, 1352, 1389
MboII	GAAGA	7 cut(s)	188, 305, 408, 1228, 1292, 1308, 1347
MflI	RGATCY	1 cut(s)	1352
MhlI	GDGCHC	2 cut(s)	790, 1003
MlsI	TGGCCA	1 cut(s)	1111
MluNI	TGGCCA	1 cut(s)	1111
MlyI	GAGTC	1 cut(s)	773
MmeI	TCCRAC	1 cut(s)	465
Mox20I	TGGCCA	1 cut(s)	1111
MroXI	GAANNNNTTC	1 cut(s)	1155
MscI	TGGCCA	1 cut(s)	1111
MseI	TTAA	2 cut(s)	338, 1371
Msp20I	TGGCCA	1 cut(s)	1111
MwoI	GCNNNNNNNGC	5 cut(s)	271, 493, 1108, 1325, 1334
NdeI	CATATG	2 cut(s)	598, 640
NdeII	GATC	6 cut(s)	18, 185, 499, 606, 1352, 1389
NlaIII	CATG	6 cut(s)	19, 217, 334, 345, 613, 1110
NlaIV	GGNNCC	5 cut(s)	633, 789, 1002, 1095, 1124
NmuCI	GTSAC	2 cut(s)	67, 541
NspI	RCATGY	2 cut(s)	217, 334
PaeR7I	CTCGAG	1 cut(s)	120
PagI	TCATGA	1 cut(s)	609
PciI	ACATGT	1 cut(s)	330
PciSI	GCTCTTC	1 cut(s)	288
PcsI	WCGNNNNNNNCGW	1 cut(s)	884
PdmI	GAANNNNTTC	1 cut(s)	1155
PfeI	GAWTC	4 cut(s)	131, 467, 988, 1156
PflMI	CCANNNNNTGG	1 cut(s)	1118
PkrI	GCNGC	3 cut(s)	200, 253, 404
PleI	GAGTC	1 cut(s)	773
PpsI	GAGTC	1 cut(s)	773
PscI	ACATGT	1 cut(s)	330
PspFI	CCCAGC	1 cut(s)	1088
PspN4I	GGNNCC	5 cut(s)	633, 789, 1002, 1095, 1124
PspPI	GGNCC	2 cut(s)	686, 1123
PstI	CTGCAG	1 cut(s)	1033
PstNI	CAGNNNCTG	1 cut(s)	797
PsuI	RGATCY	1 cut(s)	1352
RsaI	GTAC	1 cut(s)	476
RsaNI	GTAC	1 cut(s)	475
SapI	GCTCTTC	1 cut(s)	288
SaqAI	TTAA	2 cut(s)	338, 1371
SatI	GCNGC	3 cut(s)	199, 252, 403
Sau3AI	GATC	6 cut(s)	18, 185, 499, 606, 1352, 1389
Sau96I	GGNCC	2 cut(s)	686, 1123
SchI	GAGTC	1 cut(s)	773
SduI	GDGCHC	2 cut(s)	790, 1003
SfaNI	GCATC	2 cut(s)	69, 990
SfcI	CTRYAG	1 cut(s)	1029
Sfr274I	CTCGAG	1 cut(s)	120
SinI	GGWCC	1 cut(s)	1123
SlaI	CTCGAG	1 cut(s)	120
SmlI	CTYRAG	3 cut(s)	120, 449, 781
SmoI	CTYRAG	3 cut(s)	120, 449, 781
SsiI	CCGC	3 cut(s)	148, 1004, 1337
SspMI	CTAG	3 cut(s)	39, 128, 135
StyI	CCWWGG	3 cut(s)	377, 814, 1288
TaaI	ACNGT	3 cut(s)	541, 846, 888
TaiI	ACGT	2 cut(s)	447, 464
TaqI	TCGA	3 cut(s)	121, 502, 878
TfiI	GAWTC	4 cut(s)	131, 467, 988, 1156
Tru1I	TTAA	2 cut(s)	338, 1371
Tru9I	TTAA	2 cut(s)	338, 1371
TscAI	CASTG	3 cut(s)	546, 1176, 1200
TseFI	GTSAC	2 cut(s)	67, 541
TseI	GCWGC	3 cut(s)	198, 251, 402
Tsp45I	GTSAC	2 cut(s)	67, 541
TspDTI	ATGAA	5 cut(s)	626, 749, 880, 930, 984
TspGWI	ACGGA	1 cut(s)	1290
TspRI	CASTG	3 cut(s)	546, 1176, 1200
Van91I	CCANNNNNTGG	1 cut(s)	1118
VpaK11BI	GGWCC	1 cut(s)	1123
XapI	RAATTY	3 cut(s)	164, 1063, 1187
XceI	RCATGY	2 cut(s)	217, 334
XhoI	CTCGAG	1 cut(s)	120
XmnI	GAANNNNTTC	1 cut(s)	1155
XspI	CTAG	3 cut(s)	39, 128, 135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.