RchiOBHm_Chr3g0466191

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
12703014 .. 12704468
1455 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43229

Sequence Viewer

Length: 1455 bp
ATGGCCTCTCAACAGCAGAAGCTTCACTTTGCTTTGTTTCCGTTTATGGCTCCAGGCCACATGATTCCATTAATCGACATTGCTAAATTGCTTGCACAAGAAGGCATGATCATCACCATATTCACGACACCACACAATGCAGCCCGTTTCAAAGCAGCTCTTGATCGCGCCACAGAATCCGGGCTCCAAATCCGAGTAATCCAGCTGAAATTCCCATGTGAAGAAGTCGGATTACCTCAAGGGTGTGAGAACTTCGACATGGTACATTCACACGACATGACCTTCAACTTCTTTGCTGCAATCGCCATGCTACAACCGGAAGTGGAGAAACTGTTTGCGGAGCTAACTCCGAAGCCAAATTGCATAATCTCGGACATGTCTTTGCCATGGACAATCAACATCTCTCGCACGTTTCACATTCCCAGGATCTCTTTCAGTGGAACATGTTGCTTCTGTTTCTTGTGCCTCCGCAATGTGCGCATATCCAATGTCCTTGAGAATACAGCCTCAGAATTGGACTATTTTGTTGTGCCTGACGTGCCTGATCGAATTGAGATGAACAAAGCTCAGCTACCAGGGCCTCTGAGTCCAAAAATGATTGATTTTACTAGAGAAATGTTTGCCGCCGAGTACGATTCATACGGCACAATTATGAATACTTTTGAAGAATTGGAGCAAGCGTATGTGAAAGACTACAAGAAGGCAAGAAATGGTAAGGTGTGGTGTGTTGGCCCTGTTTCACTCTGCAACAAAGATGACTTGGACAAAGCACAAAGGGGTGACAAGGCCTCGGTTGATGAACAACACTGCTTGAACTGGCTTGATTCTTGGCAACCAAGTTCTGTAATTTATGCTTGCCTCGGAACTCTATGTAATGCAGTCACTGAGCAATGGATAGAGCTTGGATTAGGCTTGGAGGCATCAAAGAAACCTTTCATTTGGGTTTTGAAAGAAGGCATTCGATCCGAAGAGTTGGAAAGGTGGATTGCAGAAAATGGTTTTGAGGAAAGAACCAAGAAGATGAGCCTCTTGATTCGGGGTTGGGCTCCGCAGACACTACTGTTGTCACACCCTGCCATTGGGGGGTTCTTGACACATTGTGGCTGGAATTCAACACTAGAAGGCATATGTGCTGGGATTCCTATGATCACGTGGCCATTGTTTGCAGATCAATTTCTCAATGAAAAACTAATACAACAGGTTCTAAAGATTGCAGTCAGGGTTGGGGTGGAACATCCAATGAAGTGGGGTGAGGAGGAGGAGATTGGGGTGTTGGTGAAGAAGGAAAATGTGAAGGAAGCAATAGACAAGTTGATGGATGGAGACGAAAGCGAAGCGAGAAGAGATCGAGCTAGGCAGCTTGCGAAAATGGCCGTAAGAGCGGTGGAACAAGGCGGATCTTCTCACCGTAACATTGCACTACTAGTCCAAGACCTCATTCAACAAGGAAGTTGA

Protein Analysis

484

Amino Acids

54.62

Weight (kDa)

5.52

Isoelectric Point (pI)

42.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 280 - 411 3.2e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 479
AccBSI CCGCTC 1 cut(s) 1382
AccII CGCG 1 cut(s) 168
AciI CCGC 6 cut(s) 338, 469, 624, 1049, 1382, 1395
AclWI GGATC 3 cut(s) 434, 957, 1405
AcoI YGGCCR 2 cut(s) 1154, 1371
AcsI RAATTY 2 cut(s) 209, 1108
AcvI CACGTG 1 cut(s) 1152
AdeI CACNNNGTG 1 cut(s) 1100
AfaI GTAC 2 cut(s) 264, 632
AfiI CCNNNNNNNGG 2 cut(s) 1079, 1083
AflIII ACRYGT 2 cut(s) 375, 443
AgsI TTSAA 7 cut(s) 151, 286, 665, 814, 949, 1113, 1442
AhlI ACTAGT 1 cut(s) 1423
AjiI CACGTC 1 cut(s) 538
AjnI CCWGG 3 cut(s) 52, 422, 574
AjuI GAANNNNNNNTTGG 2 cut(s) 1422, 1454
AluBI AGCT 9 cut(s) 22, 158, 205, 343, 566, 571, 901, 1352, 1360
AluI AGCT 9 cut(s) 22, 158, 205, 343, 566, 571, 901, 1352, 1360
Alw26I GTCTC 1 cut(s) 1317
AlwI GGATC 3 cut(s) 434, 957, 1405
AlwNI CAGNNNCTG 1 cut(s) 884
AoxI GGCC 7 cut(s) 3, 55, 578, 730, 786, 1154, 1371
ApeKI GCWGC 4 cut(s) 140, 155, 296, 1357
ApoI RAATTY 2 cut(s) 209, 1108
AseI ATTAAT 1 cut(s) 71
Asp700I GAANNNNTTC 2 cut(s) 932, 957
AspLEI GCGC 2 cut(s) 170, 480
AspS9I GGNCC 2 cut(s) 578, 731
AsuC2I CCSGG 1 cut(s) 181
AsuHPI GGTGA 5 cut(s) 106, 791, 1262, 1288, 1397
BalI TGGCCA 1 cut(s) 1156
BanII GRGCYC 2 cut(s) 186, 1048
BarI GAAGNNNNNNTAC 2 cut(s) 216, 248
BbrPI CACGTG 1 cut(s) 1152
BbvI GCAGC 4 cut(s) 152, 167, 283, 1369
BccI CCATC 2 cut(s) 1309, 1313
BceAI ACGGC 2 cut(s) 658, 1358
BciT130I CCWGG 3 cut(s) 54, 424, 576
BclI TGATCA 2 cut(s) 108, 1146
BcnI CCSGG 1 cut(s) 181
BcoDI GTCTC 1 cut(s) 1317
BcuI ACTAGT 1 cut(s) 1423
BfaI CTAG 4 cut(s) 609, 1118, 1353, 1424
BisI GCNGC 5 cut(s) 141, 156, 297, 624, 1358
BlpI GCTNAGC 1 cut(s) 567
BlsI GCNGC 5 cut(s) 142, 157, 298, 625, 1359
Bme1390I CCNGG 4 cut(s) 54, 181, 424, 576
BmgBI CACGTC 1 cut(s) 538
BmgT120I GGNCC 2 cut(s) 578, 731
BmiI GGNNCC 3 cut(s) 51, 185, 1047
BmrFI CCNGG 4 cut(s) 54, 181, 424, 576
BmsI GCATC 1 cut(s) 929
BpmI CTGGAG 1 cut(s) 36
Bpu1102I GCTNAGC 1 cut(s) 567
BpuEI CTTGAG 2 cut(s) 222, 515
BpuMI CCSGG 1 cut(s) 181
BsaAI YACGTR 1 cut(s) 1152
BsaJI CCNNGG 5 cut(s) 386, 422, 575, 789, 859
BsaWI WCCGGW 1 cut(s) 316
BsaXI ACNNNNNCTCC 4 cut(s) 317, 347, 665, 695
Bsc4I CCNNNNNNNGG 2 cut(s) 1079, 1083
Bse1I ACTGG 1 cut(s) 821
Bse3DI GCAATG 4 cut(s) 78, 478, 896, 1413
BseBI CCWGG 3 cut(s) 54, 424, 576
BseDI CCNNGG 5 cut(s) 386, 422, 575, 789, 859
BseGI GGATG 2 cut(s) 1234, 1324
BseLI CCNNNNNNNGG 2 cut(s) 1079, 1083
BseMI GCAATG 4 cut(s) 78, 478, 896, 1413
BseMII CTCAG 4 cut(s) 522, 575, 581, 876
BseNI ACTGG 1 cut(s) 821
BseRI GAGGAG 3 cut(s) 1268, 1271, 1274
BseXI GCAGC 4 cut(s) 152, 167, 283, 1369
BseYI CCCAGC 1 cut(s) 1133
Bsh1236I CGCG 1 cut(s) 168
BshFI GGCC 7 cut(s) 5, 57, 580, 732, 788, 1156, 1373
BsiSI CCGG 2 cut(s) 180, 317
BslI CCNNNNNNNGG 2 cut(s) 1079, 1083
BsmAI GTCTC 1 cut(s) 1317
BsmBI CGTCTC 1 cut(s) 1317
BsmI GAATGC 1 cut(s) 957
BsnI GGCC 7 cut(s) 5, 57, 580, 732, 788, 1156, 1373
Bsp1286I GDGCHC 2 cut(s) 186, 1048
Bsp143I GATC 9 cut(s) 108, 163, 426, 544, 962, 1146, 1168, 1345, 1397
Bsp1720I GCTNAGC 1 cut(s) 567
Bsp19I CCATGG 1 cut(s) 386
BspACI CCGC 6 cut(s) 338, 469, 624, 1049, 1382, 1395
BspANI GGCC 7 cut(s) 5, 57, 580, 732, 788, 1156, 1373
BspCNI CTCAG 4 cut(s) 521, 576, 580, 877
BspFNI CGCG 1 cut(s) 168
BspLI GGNNCC 3 cut(s) 51, 185, 1047
BspPI GGATC 3 cut(s) 434, 957, 1405
BsrBI CCGCTC 1 cut(s) 1382
BsrDI GCAATG 4 cut(s) 78, 478, 896, 1413
BsrI ACTGG 1 cut(s) 821
BssECI CCNNGG 5 cut(s) 386, 422, 575, 789, 859
BssMI GATC 9 cut(s) 108, 163, 426, 544, 962, 1146, 1168, 1345, 1397
BssT1I CCWWGG 1 cut(s) 386
Bst2UI CCWGG 3 cut(s) 54, 424, 576
Bst4CI ACNGT 3 cut(s) 333, 1062, 1409
Bst6I CTCTTC 2 cut(s) 963, 1336
BstBAI YACGTR 1 cut(s) 1152
BstC8I GCNNGC 4 cut(s) 93, 678, 856, 1362
BstDEI CTNAG 4 cut(s) 508, 567, 584, 885
BstDSI CCRYGG 1 cut(s) 386
BstF5I GGATG 2 cut(s) 1234, 1324
BstFNI CGCG 1 cut(s) 168
BstHHI GCGC 2 cut(s) 170, 480
BstKTI GATC 9 cut(s) 111, 166, 429, 547, 965, 1149, 1171, 1348, 1400
BstMAI GTCTC 1 cut(s) 1317
BstMBI GATC 9 cut(s) 108, 163, 426, 544, 962, 1146, 1168, 1345, 1397
BstMWI GCNNNNNNNGC 6 cut(s) 302, 477, 538, 577, 1370, 1379
BstNI CCWGG 3 cut(s) 54, 424, 576
BstNSI RCATGY 2 cut(s) 379, 447
BstSCI CCNGG 4 cut(s) 52, 179, 422, 574
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 4 cut(s) 152, 167, 283, 1369
BstX2I RGATCY 2 cut(s) 426, 1397
BstXI CCANNNNNNTGG 1 cut(s) 1245
BstYI RGATCY 2 cut(s) 426, 1397
BsuRI GGCC 7 cut(s) 5, 57, 580, 732, 788, 1156, 1373
BtgI CCRYGG 1 cut(s) 386
BtrI CACGTC 1 cut(s) 538
BtsCI GGATG 2 cut(s) 1234, 1324
BtsI GCAGTG 1 cut(s) 805
BtsIMutI CAGTG 3 cut(s) 442, 805, 882
Cac8I GCNNGC 4 cut(s) 93, 678, 856, 1362
CaiI CAGNNNCTG 1 cut(s) 884
CfoI GCGC 2 cut(s) 170, 480
Cfr13I GGNCC 2 cut(s) 578, 731
Csp6I GTAC 2 cut(s) 263, 631
CviAII CATG 9 cut(s) 61, 106, 216, 259, 277, 307, 376, 387, 444
CviQI GTAC 2 cut(s) 263, 631
DdeI CTNAG 4 cut(s) 508, 567, 584, 885
DpnI GATC 9 cut(s) 110, 165, 428, 546, 964, 1148, 1170, 1347, 1399
DpnII GATC 9 cut(s) 108, 163, 426, 544, 962, 1146, 1168, 1345, 1397
DraIII CACNNNGTG 1 cut(s) 1100
EaeI YGGCCR 2 cut(s) 1154, 1371
Eam1104I CTCTTC 2 cut(s) 963, 1336
EarI CTCTTC 2 cut(s) 963, 1336
EciI GGCGGA 1 cut(s) 1410
Eco130I CCWWGG 1 cut(s) 386
Eco147I AGGCCT 1 cut(s) 788
Eco24I GRGCYC 2 cut(s) 186, 1048
Eco72I CACGTG 1 cut(s) 1152
EcoO109I RGGNCCY 1 cut(s) 578
EcoRI GAATTC 1 cut(s) 1108
EcoRII CCWGG 3 cut(s) 52, 422, 574
EcoT14I CCWWGG 1 cut(s) 386
EcoT38I GRGCYC 2 cut(s) 186, 1048
ErhI CCWWGG 1 cut(s) 386
Esp3I CGTCTC 1 cut(s) 1317
FaeI CATG 9 cut(s) 64, 109, 219, 262, 280, 310, 379, 390, 447
FalI AAGNNNNNCTT 4 cut(s) 11, 43, 144, 176
FatI CATG 9 cut(s) 60, 105, 215, 258, 276, 306, 375, 386, 443
FauNDI CATATG 1 cut(s) 1127
FbaI TGATCA 2 cut(s) 108, 1146
Fnu4HI GCNGC 5 cut(s) 141, 156, 297, 624, 1358
FokI GGATG 2 cut(s) 1221, 1331
FriOI GRGCYC 2 cut(s) 186, 1048
Fsp4HI GCNGC 5 cut(s) 141, 156, 297, 624, 1358
FspAI RTGCGCAY 1 cut(s) 479
FspBI CTAG 4 cut(s) 609, 1118, 1353, 1424
FspI TGCGCA 1 cut(s) 479
GlaI GCGC 2 cut(s) 169, 479
GluI GCNGC 5 cut(s) 141, 156, 297, 624, 1358
GsaI CCCAGC 1 cut(s) 1137
GsuI CTGGAG 1 cut(s) 36
HaeIII GGCC 7 cut(s) 5, 57, 580, 732, 788, 1156, 1373
HapII CCGG 2 cut(s) 180, 317
HhaI GCGC 2 cut(s) 170, 480
Hin1II CATG 9 cut(s) 64, 109, 219, 262, 280, 310, 379, 390, 447
Hin6I GCGC 2 cut(s) 168, 478
HinP1I GCGC 2 cut(s) 168, 478
HindIII AAGCTT 1 cut(s) 20
HinfI GANTC 7 cut(s) 64, 176, 586, 635, 824, 1033, 1138
HpaII CCGG 2 cut(s) 180, 317
HphI GGTGA 5 cut(s) 106, 791, 1262, 1288, 1397
Hpy188I TCNGA 8 cut(s) 194, 230, 351, 373, 511, 585, 863, 967
Hpy188III TCNNGA 4 cut(s) 124, 161, 1030, 1090
HpyAV CCTTC 7 cut(s) 95, 292, 694, 947, 1115, 1276, 1288
HpyCH4III ACNGT 3 cut(s) 333, 1062, 1409
HpyCH4IV ACGT 3 cut(s) 410, 537, 1151
HpyF10VI GCNNNNNNNGC 6 cut(s) 302, 477, 538, 577, 1370, 1379
HpyF3I CTNAG 4 cut(s) 508, 567, 584, 885
HpySE526I ACGT 3 cut(s) 410, 537, 1151
Hsp92II CATG 9 cut(s) 64, 109, 219, 262, 280, 310, 379, 390, 447
HspAI GCGC 2 cut(s) 168, 478
Ksp22I TGATCA 2 cut(s) 108, 1146
Kzo9I GATC 9 cut(s) 108, 163, 426, 544, 962, 1146, 1168, 1345, 1397
LmnI GCTCC 5 cut(s) 55, 189, 340, 673, 1051
Lsp1109I GCAGC 4 cut(s) 152, 167, 283, 1369
LweI GCATC 1 cut(s) 929
MaeI CTAG 4 cut(s) 609, 1118, 1353, 1424
MaeII ACGT 3 cut(s) 410, 537, 1151
MaeIII GTNAC 4 cut(s) 779, 880, 1065, 1409
MalI GATC 9 cut(s) 110, 165, 428, 546, 964, 1148, 1170, 1347, 1399
MbiI CCGCTC 1 cut(s) 1382
MboI GATC 9 cut(s) 108, 163, 426, 544, 962, 1146, 1168, 1345, 1397
MboII GAAGA 7 cut(s) 233, 677, 980, 1030, 1291, 1353, 1392
MflI RGATCY 2 cut(s) 426, 1397
MhlI GDGCHC 2 cut(s) 186, 1048
MlsI TGGCCA 1 cut(s) 1156
MluNI TGGCCA 1 cut(s) 1156
MlyI GAGTC 1 cut(s) 595
MmeI TCCRAC 2 cut(s) 208, 954
Mox20I TGGCCA 1 cut(s) 1156
MroXI GAANNNNTTC 2 cut(s) 932, 957
MscI TGGCCA 1 cut(s) 1156
MseI TTAA 1 cut(s) 71
MslI CAYNNNNRTG 1 cut(s) 650
Msp20I TGGCCA 1 cut(s) 1156
MspA1I CMGCKG 1 cut(s) 205
MspI CCGG 2 cut(s) 180, 317
MspR9I CCNGG 4 cut(s) 54, 181, 424, 576
Mva1269I GAATGC 1 cut(s) 957
MvaI CCWGG 3 cut(s) 54, 424, 576
MvnI CGCG 1 cut(s) 168
MwoI GCNNNNNNNGC 6 cut(s) 302, 477, 538, 577, 1370, 1379
NciI CCSGG 1 cut(s) 181
NcoI CCATGG 1 cut(s) 386
NdeI CATATG 1 cut(s) 1127
NdeII GATC 9 cut(s) 108, 163, 426, 544, 962, 1146, 1168, 1345, 1397
NlaIII CATG 9 cut(s) 64, 109, 219, 262, 280, 310, 379, 390, 447
NlaIV GGNNCC 3 cut(s) 51, 185, 1047
NmeAIII GCCGAG 1 cut(s) 652
NmuCI GTSAC 3 cut(s) 779, 880, 1065
NsbI TGCGCA 1 cut(s) 479
NspI RCATGY 2 cut(s) 379, 447
PceI AGGCCT 1 cut(s) 788
PciI ACATGT 2 cut(s) 375, 443
PctI GAATGC 1 cut(s) 957
PdmI GAANNNNTTC 2 cut(s) 932, 957
PfeI GAWTC 6 cut(s) 64, 176, 635, 824, 1033, 1138
PkrI GCNGC 5 cut(s) 142, 157, 298, 625, 1359
PleI GAGTC 1 cut(s) 594
PmaCI CACGTG 1 cut(s) 1152
PmlI CACGTG 1 cut(s) 1152
PpsI GAGTC 1 cut(s) 594
Ppu21I YACGTR 1 cut(s) 1152
PscI ACATGT 2 cut(s) 375, 443
PshBI ATTAAT 1 cut(s) 71
Psp6I CCWGG 3 cut(s) 52, 422, 574
PspCI CACGTG 1 cut(s) 1152
PspFI CCCAGC 1 cut(s) 1133
PspGI CCWGG 3 cut(s) 52, 422, 574
PspN4I GGNNCC 3 cut(s) 51, 185, 1047
PspPI GGNCC 2 cut(s) 578, 731
PstNI CAGNNNCTG 1 cut(s) 884
PsuI RGATCY 2 cut(s) 426, 1397
PvuII CAGCTG 1 cut(s) 205
RsaI GTAC 2 cut(s) 264, 632
RsaNI GTAC 2 cut(s) 263, 631
RseI CAYNNNNRTG 1 cut(s) 650
SaqAI TTAA 1 cut(s) 71
SatI GCNGC 5 cut(s) 141, 156, 297, 624, 1358
Sau3AI GATC 9 cut(s) 108, 163, 426, 544, 962, 1146, 1168, 1345, 1397
Sau96I GGNCC 2 cut(s) 578, 731
SchI GAGTC 1 cut(s) 595
ScrFI CCNGG 4 cut(s) 54, 181, 424, 576
SduI GDGCHC 2 cut(s) 186, 1048
SfaNI GCATC 1 cut(s) 929
SmiMI CAYNNNNRTG 1 cut(s) 650
SmlI CTYRAG 2 cut(s) 237, 494
SmoI CTYRAG 2 cut(s) 237, 494
SpeI ACTAGT 1 cut(s) 1423
SseBI AGGCCT 1 cut(s) 788
SsiI CCGC 6 cut(s) 338, 469, 624, 1049, 1382, 1395
SspMI CTAG 4 cut(s) 609, 1118, 1353, 1424
StuI AGGCCT 1 cut(s) 788
StyD4I CCNGG 4 cut(s) 52, 179, 422, 574
StyI CCWWGG 1 cut(s) 386
TaaI ACNGT 3 cut(s) 333, 1062, 1409
TaiI ACGT 3 cut(s) 413, 540, 1154
TaqI TCGA 5 cut(s) 75, 255, 547, 961, 1348
TauI GCSGC 1 cut(s) 626
TfiI GAWTC 6 cut(s) 64, 176, 635, 824, 1033, 1138
Tru1I TTAA 1 cut(s) 71
Tru9I TTAA 1 cut(s) 71
TscAI CASTG 3 cut(s) 442, 812, 889
TseFI GTSAC 3 cut(s) 779, 880, 1065
TseI GCWGC 4 cut(s) 140, 155, 296, 1357
Tsp45I GTSAC 3 cut(s) 779, 880, 1065
TspDTI ATGAA 7 cut(s) 572, 627, 668, 813, 925, 1197, 1256
TspGWI ACGGA 1 cut(s) 30
TspRI CASTG 3 cut(s) 442, 812, 889
VspI ATTAAT 1 cut(s) 71
XapI RAATTY 2 cut(s) 209, 1108
XceI RCATGY 2 cut(s) 379, 447
XmnI GAANNNNTTC 2 cut(s) 932, 957
XspI CTAG 4 cut(s) 609, 1118, 1353, 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.