Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003768

Physical Location & Seq

Genomic Coordinates Reverse (-)

23016174 .. 23018509

Gene Structure 2336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G62170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGGCAGTAGGAAAGGTTGTGGTATCTGTGGCATCACTCCTCCTAGTGGTGGGTGTTGCCATAGGAGTTATCACGTTCGTTAATAAAGGAGGCGGCGCCAATGGCGACAGTAATGGTCCCATAAACTCTCATCAGAAAGCGGTTCAGACAATTTGCCAGTCAACCACAGACCAAGGTTCGTGCGCGAAAACACTCGACCCAGTCAAAAGTGATGATCCAAGCAAGCTTGTCAAAGCCTTCCTGATGGCTACTAAAGACGCGATCACAAAATCCTCAAACTTCACGGCTTCGACCGAAGGAGGTATGGGTACTAACATGAACGCGACCAGCAAAGCCGTTCTTGATTACTGCAAGAGAGTATTGATGTACGCTCTTGAGGATCTTGAGACCATTGTTGAAGAGATGGGTGAGGATCTTCAGCAGAGTGGAACTAAGCTTGACCAGCTCAAACAATGGTTAACTGGAGTTTTCAACTACCAAACCGATTGTCTTGACGACATCGAGGAAGTTGAGCTAAAGAAGATCATGGGTGAAGGAATCTCTAACTCCAAGGTTTTGACCAGTAACGCTATCGATATCTTCCATTCCGTTGTTACCGCGATGGCCCAAATGGGTGTCAAAGTCGACGATATGAAGAACATAACCATGGGAGCCGGAGCCGGTGGAGCTGCACGTCGCCTTCTTGAAGACAACGACTCTAAGGGACTCCCCAAATGGTTTTCTGGTAAAGACAGGAAGCTTATGGCTAAGGCCGGACGTGGCGCTCCAGCTGGCGGTGATGATGGTATCGGTGAAGGCGGTGGTGGTGGCGGTAAGATCAAGGCGACTCATGTAGTGGCTAAGGATGGAAGTGGACAGTTTAAGACCATTTCTGAGGCGGTTATGGCTTGCCCGGATAAAAACCCTGGAAGGTGCATTATCCATATCAAGGCTGGTATCTACAATGAACAAGTCAGAATCCCTAAGAAGAAGAACAACATTTTCATGTTCGGTGATGGTGCTACACAAACCATCATTACCTTTGACAGAAGTGTTAAACTTAGCCCAGGAACCACTACTTCACTCAGTGGCACCGTTCAGGTCGAATCTGAGGGATTCATGGCGAAATGGATTGGGTTTAAGAACACTGCTGGTCCATTGGGACACCAAGCGGTCGCACTCCGTGTGAACGGAGACCGTGCGGTCATATTCAACTGTAGATTCGACGGTTACCAAGACACACTCTACGTCAACAACGGACGTCAATTCTACAGGAACATTGTTGTATCCGGTACAGTGGATTTCATCTTCGGAAAATCCGCAACTGTGATCCAAAACTCTCTCATCCTCGTCCGAAAGGGAAGCCCCGGACAATCCAACTACGTTACGGCTGACGGTAATGAAAAGGGTGCAGCGATGAAGATCGGTATCGTCCTCCATAACTGCCGTATCATACCGGACAAGGAGCTCGAAGCTGACAAGCTAACCATCAAATCGTACCTAGGAAGGCCGTGGAAGAAGTTTGCCACGACTGTGATTATTGGAACTGAGATTGGTGATTTGATTAAACCAGAAGGATGGACCGAATGGCAAGGAGAACAAAACCACAAGACTGCTAAATACATTGAGTTCAATAACCGTGGACCGGGAGCTGCCACTACTCAGAGGCCTCCTTGGGTTAAGGTGGCTAAGTCTGCGGCTGAGGTTGAAACTTACACCGTGGCTAACTGGGTTGGTCCAGCTAACTGGATCCAAGAAGCCAACGTGCCCGTCCAACTAGGATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0008150 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0042995 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0090406 GO:0098772 GO:0120025

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

588

Amino Acids

62.96

Weight (kDa)

8.75

Isoelectric Point (pI)

26.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	47 - 193	7.9e-21	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	278 - 571	3.3e-109	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003768)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47030 AT2G47040 AT2G47050 AT3G62170 AT3G62180 AT3G62180
fragaria_vesca	FvH4_1g26360 FvH4_4g21500
malus_domestica	MD16G1136400.v1.1 MD17G1283800.v1.1
prunus_persica	Prupe.1G105400_v2.0.a1 Prupe.3G003700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0486131 RchiOBHm_Chr4g0427511
rosa_laevigata	RLG00000007232 RLG00000023101
rosa_multiflora	Rmu_sc0001006.1_g000002 Rmu_sc0009627.1_g000001 Rmu_sc0017895.1_g000001 Rmu_sc0017895.1_g000002
rosa_roxburghii	Rroxscaffold_5G00369150 Rroxscaffold_6G00396030
rosa_rugosa	Rorug03G0223700 Rorug04G0218200
rosa_samantha	Rh3AG273500 Rh3BG308600 Rh3CG307100 Rh3DG303400 Rh4AG274700 Rh4BG280500 Rh4CG295800 Rh4DG277900
rosa_wichuraiana	Rw3G024240 Rw4G023810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1181
AatII	GACGTC	1 cut(s)	1243
AccB1I	GGYRCC	2 cut(s)	95, 1070
AccI	GTMKAC	1 cut(s)	624
AccII	CGCG	4 cut(s)	185, 260, 323, 599
AclWI	GGATC	6 cut(s)	209, 387, 420, 1303, 1723, 1736
AcuI	CTGAAG	1 cut(s)	401
AcyI	GRCGYC	2 cut(s)	96, 1240
AdeI	CACNNNGTG	2 cut(s)	1067, 1163
AfaI	GTAC	4 cut(s)	310, 368, 1273, 1478
AfiI	CCNNNNNNNGG	5 cut(s)	46, 49, 773, 928, 1624
AgsI	TTSAA	6 cut(s)	398, 472, 686, 1192, 1612, 1688
AjiI	CACGTC	2 cut(s)	674, 758
AjnI	CCWGG	2 cut(s)	904, 1045
AleI	CACNNNNGTG	1 cut(s)	1511
Alw21I	GWGCWC	1 cut(s)	1449
Alw26I	GTCTC	2 cut(s)	380, 1167
AlwI	GGATC	6 cut(s)	209, 387, 420, 1303, 1723, 1736
AoxI	GGCC	4 cut(s)	603, 750, 1487, 1646
ApeKI	GCWGC	3 cut(s)	668, 1391, 1631
ArsI	GACNNNNNNTTYG	2 cut(s)	472, 504
AspA2I	CCTAGG	1 cut(s)	1480
AspLEI	GCGC	3 cut(s)	98, 185, 764
AspS9I	GGNCC	6 cut(s)	116, 604, 1133, 1560, 1622, 1715
AsuC2I	CCSGG	3 cut(s)	893, 1347, 1626
AsuHPI	GGTGA	6 cut(s)	419, 542, 788, 803, 1004, 1547
AvaII	GGWCC	5 cut(s)	116, 1133, 1560, 1622, 1715
AvrII	CCTAGG	1 cut(s)	1480
BaeGI	GKGCMC	1 cut(s)	1749
BaeI	ACNNNNGTAYC	2 cut(s)	1411, 1444
BamHI	GGATCC	1 cut(s)	1728
BanI	GGYRCC	2 cut(s)	95, 1070
BanII	GRGCYC	1 cut(s)	1449
BbsI	GAAGAC	1 cut(s)	693
Bbv12I	GWGCWC	1 cut(s)	1449
BbvCI	CCTCAGC	1 cut(s)	1680
BbvI	GCAGC	3 cut(s)	655, 1403, 1618
BccI	CCATC	9 cut(s)	238, 397, 595, 776, 839, 989, 1019, 1475, 1551
BceAI	ACGGC	5 cut(s)	300, 320, 1383, 1410, 1474
BciT130I	CCWGG	2 cut(s)	906, 1047
BciVI	GTATCC	1 cut(s)	1276
BcnI	CCSGG	3 cut(s)	893, 1347, 1626
BcoDI	GTCTC	2 cut(s)	380, 1167
BfaI	CTAG	3 cut(s)	44, 1481, 1757
BfmI	CTRYAG	2 cut(s)	1195, 1249
BfoI	RGCGCY	2 cut(s)	99, 765
BfuI	GTATCC	1 cut(s)	1276
BisI	GCNGC	5 cut(s)	94, 669, 1392, 1632, 1677
BlnI	CCTAGG	1 cut(s)	1480
BlsI	GCNGC	5 cut(s)	95, 670, 1393, 1633, 1678
Bme1390I	CCNGG	5 cut(s)	893, 906, 1047, 1347, 1626
Bme18I	GGWCC	5 cut(s)	116, 1133, 1560, 1622, 1715
BmgBI	CACGTC	2 cut(s)	674, 758
BmgT120I	GGNCC	6 cut(s)	116, 604, 1133, 1560, 1622, 1715
BmiI	GGNNCC	7 cut(s)	97, 118, 652, 658, 1051, 1072, 1730
BmrFI	CCNGG	5 cut(s)	893, 906, 1047, 1347, 1626
BmrI	ACTGGG	2 cut(s)	194, 1717
BmsI	GCATC	1 cut(s)	41
BmuI	ACTGGG	2 cut(s)	194, 1717
BpiI	GAAGAC	1 cut(s)	693
BpmI	CTGGAG	2 cut(s)	483, 750
Bpu10I	CCTNAGC	3 cut(s)	747, 840, 1680
BpuEI	CTTGAG	2 cut(s)	395, 404
BpuMI	CCSGG	3 cut(s)	893, 1347, 1626
Bsa29I	ATCGAT	1 cut(s)	573
BsaBI	GATNNNNATC	2 cut(s)	1400, 1406
BsaHI	GRCGYC	2 cut(s)	96, 1240
BsaI	GGTCTC	2 cut(s)	380, 1167
BsaWI	WCCGGW	2 cut(s)	1268, 1435
Bsc4I	CCNNNNNNNGG	5 cut(s)	46, 49, 773, 928, 1624
Bse118I	RCCGGY	1 cut(s)	659
Bse1I	ACTGG	6 cut(s)	157, 200, 466, 561, 1712, 1730
Bse8I	GATNNNNATC	2 cut(s)	1400, 1406
BseBI	CCWGG	2 cut(s)	906, 1047
BseCI	ATCGAT	1 cut(s)	573
BseGI	GGATG	3 cut(s)	850, 1323, 1562
BseJI	GATNNNNATC	2 cut(s)	1400, 1406
BseLI	CCNNNNNNNGG	5 cut(s)	46, 49, 773, 928, 1624
BseMII	CTCAG	6 cut(s)	864, 1078, 1080, 1518, 1655, 1671
BseNI	ACTGG	6 cut(s)	157, 200, 466, 561, 1712, 1730
BseRI	GAGGAG	1 cut(s)	29
BseSI	GKGCMC	1 cut(s)	1749
BseXI	GCAGC	3 cut(s)	655, 1403, 1618
BsgI	GTGCAG	2 cut(s)	654, 1410
Bsh1236I	CGCG	4 cut(s)	185, 260, 323, 599
Bsh1285I	CGRYCG	2 cut(s)	294, 1155
BshFI	GGCC	4 cut(s)	605, 752, 1489, 1648
BshNI	GGYRCC	2 cut(s)	95, 1070
BshVI	ATCGAT	1 cut(s)	573
BsiEI	CGRYCG	2 cut(s)	294, 1155
BsiHKAI	GWGCWC	1 cut(s)	1449
BsiSI	CCGG	8 cut(s)	654, 660, 753, 893, 1269, 1347, 1436, 1625
BslFI	GGGAC	3 cut(s)	102, 717, 1155
BslI	CCNNNNNNNGG	5 cut(s)	46, 49, 773, 928, 1624
BsmAI	GTCTC	2 cut(s)	380, 1167
BsmFI	GGGAC	3 cut(s)	102, 717, 1155
BsnI	GGCC	4 cut(s)	605, 752, 1489, 1648
Bso31I	GGTCTC	2 cut(s)	380, 1167
Bsp1286I	GDGCHC	2 cut(s)	1449, 1749
Bsp143I	GATC	9 cut(s)	214, 261, 379, 412, 522, 816, 1308, 1401, 1728
Bsp19I	CCATGG	1 cut(s)	645
BspANI	GGCC	4 cut(s)	605, 752, 1489, 1648
BspCNI	CTCAG	6 cut(s)	865, 1077, 1081, 1519, 1654, 1672
BspDI	ATCGAT	1 cut(s)	573
BspFNI	CGCG	4 cut(s)	185, 260, 323, 599
BspLI	GGNNCC	7 cut(s)	97, 118, 652, 658, 1051, 1072, 1730
BspPI	GGATC	6 cut(s)	209, 387, 420, 1303, 1723, 1736
BspT107I	GGYRCC	2 cut(s)	95, 1070
BspTNI	GGTCTC	2 cut(s)	380, 1167
BsrFI	RCCGGY	1 cut(s)	659
BsrI	ACTGG	6 cut(s)	157, 200, 466, 561, 1712, 1730
BssAI	RCCGGY	1 cut(s)	659
BssMI	GATC	9 cut(s)	214, 261, 379, 412, 522, 816, 1308, 1401, 1728
BssNI	GRCGYC	2 cut(s)	96, 1240
BssT1I	CCWWGG	5 cut(s)	172, 549, 645, 1480, 1652
Bst2UI	CCWGG	2 cut(s)	906, 1047
Bst6I	CTCTTC	1 cut(s)	393
BstACI	GRCGYC	2 cut(s)	96, 1240
BstC8I	GCNNGC	3 cut(s)	224, 772, 889
BstDSI	CCRYGG	4 cut(s)	645, 1490, 1618, 1698
BstEII	GGTNACC	1 cut(s)	1208
BstF5I	GGATG	3 cut(s)	850, 1323, 1562
BstFNI	CGCG	4 cut(s)	185, 260, 323, 599
BstH2I	RGCGCY	2 cut(s)	99, 765
BstHHI	GCGC	3 cut(s)	98, 185, 764
BstKTI	GATC	9 cut(s)	217, 264, 382, 415, 525, 819, 1311, 1404, 1731
BstMAI	GTCTC	2 cut(s)	380, 1167
BstMBI	GATC	9 cut(s)	214, 261, 379, 412, 522, 816, 1308, 1401, 1728
BstMCI	CGRYCG	2 cut(s)	294, 1155
BstMWI	GCNNNNNNNGC	5 cut(s)	102, 442, 665, 884, 1673
BstNI	CCWGG	2 cut(s)	906, 1047
BstPI	GGTNACC	1 cut(s)	1208
BstSCI	CCNGG	5 cut(s)	891, 904, 1045, 1345, 1624
BstSFI	CTRYAG	2 cut(s)	1195, 1249
BstSLI	GKGCMC	1 cut(s)	1749
BstUI	CGCG	4 cut(s)	185, 260, 323, 599
BstV1I	GCAGC	3 cut(s)	655, 1403, 1618
BstV2I	GAAGAC	1 cut(s)	693
BstX2I	RGATCY	3 cut(s)	379, 412, 1728
BstXI	CCANNNNNNTGG	2 cut(s)	1557, 1725
BstYI	RGATCY	3 cut(s)	379, 412, 1728
Bsu15I	ATCGAT	1 cut(s)	573
BsuI	GTATCC	1 cut(s)	1276
BsuRI	GGCC	4 cut(s)	605, 752, 1489, 1648
BsuTUI	ATCGAT	1 cut(s)	573
BtgI	CCRYGG	4 cut(s)	645, 1490, 1618, 1698
BtgZI	GCGATG	2 cut(s)	614, 1409
BtrI	CACGTC	2 cut(s)	674, 758
BtsCI	GGATG	3 cut(s)	850, 1323, 1562
BtsI	GCAGTG	1 cut(s)	1125
BtsIMutI	CAGTG	3 cut(s)	1072, 1125, 1281
Cac8I	GCNNGC	3 cut(s)	224, 772, 889
CfoI	GCGC	3 cut(s)	98, 185, 764
Cfr10I	RCCGGY	1 cut(s)	659
Cfr13I	GGNCC	6 cut(s)	116, 604, 1133, 1560, 1622, 1715
ClaI	ATCGAT	1 cut(s)	573
CseI	GACGC	1 cut(s)	266
Csp6I	GTAC	4 cut(s)	309, 367, 1272, 1477
CspCI	CAANNNNNGTGG	2 cut(s)	1600, 1635
CviAII	CATG	6 cut(s)	316, 526, 646, 830, 985, 1099
CviQI	GTAC	4 cut(s)	309, 367, 1272, 1477
DinI	GGCGCC	1 cut(s)	97
DpnI	GATC	9 cut(s)	216, 263, 381, 414, 524, 818, 1310, 1403, 1730
DpnII	GATC	9 cut(s)	214, 261, 379, 412, 522, 816, 1308, 1401, 1728
DraIII	CACNNNGTG	2 cut(s)	1067, 1163
DrdI	GACNNNNNNGTC	1 cut(s)	1181
DseDI	GACNNNNNNGTC	1 cut(s)	1181
Eam1104I	CTCTTC	1 cut(s)	393
EarI	CTCTTC	1 cut(s)	393
Ecl136II	GAGCTC	1 cut(s)	1447
Eco130I	CCWWGG	5 cut(s)	172, 549, 645, 1480, 1652
Eco147I	AGGCCT	1 cut(s)	1648
Eco24I	GRGCYC	1 cut(s)	1449
Eco31I	GGTCTC	2 cut(s)	380, 1167
Eco32I	GATATC	1 cut(s)	577
Eco47I	GGWCC	5 cut(s)	116, 1133, 1560, 1622, 1715
Eco53kI	GAGCTC	1 cut(s)	1447
Eco57I	CTGAAG	1 cut(s)	401
Eco91I	GGTNACC	1 cut(s)	1208
EcoICRI	GAGCTC	1 cut(s)	1447
EcoO65I	GGTNACC	1 cut(s)	1208
EcoRII	CCWGG	2 cut(s)	904, 1045
EcoRV	GATATC	1 cut(s)	577
EcoT14I	CCWWGG	5 cut(s)	172, 549, 645, 1480, 1652
EcoT38I	GRGCYC	1 cut(s)	1449
EgeI	GGCGCC	1 cut(s)	97
EheI	GGCGCC	1 cut(s)	97
ErhI	CCWWGG	5 cut(s)	172, 549, 645, 1480, 1652
FaeI	CATG	6 cut(s)	319, 529, 649, 833, 988, 1102
FalI	AAGNNNNNCTT	2 cut(s)	324, 356
FaqI	GGGAC	3 cut(s)	102, 717, 1155
FatI	CATG	6 cut(s)	315, 525, 645, 829, 984, 1098
FblI	GTMKAC	1 cut(s)	624
Fnu4HI	GCNGC	5 cut(s)	94, 669, 1392, 1632, 1677
FokI	GGATG	3 cut(s)	857, 1310, 1569
FriOI	GRGCYC	1 cut(s)	1449
Fsp4HI	GCNGC	5 cut(s)	94, 669, 1392, 1632, 1677
FspBI	CTAG	3 cut(s)	44, 1481, 1757
GlaI	GCGC	3 cut(s)	97, 184, 763
GluI	GCNGC	5 cut(s)	94, 669, 1392, 1632, 1677
GsuI	CTGGAG	2 cut(s)	483, 750
HaeII	RGCGCY	2 cut(s)	99, 765
HaeIII	GGCC	4 cut(s)	605, 752, 1489, 1648
HapII	CCGG	8 cut(s)	654, 660, 753, 893, 1269, 1347, 1436, 1625
HgaI	GACGC	1 cut(s)	266
HhaI	GCGC	3 cut(s)	98, 185, 764
Hin1I	GRCGYC	2 cut(s)	96, 1240
Hin1II	CATG	6 cut(s)	319, 529, 649, 833, 988, 1102
Hin6I	GCGC	3 cut(s)	96, 183, 762
HinP1I	GCGC	3 cut(s)	96, 183, 762
HincII	GTYRAC	4 cut(s)	162, 459, 625, 1231
HindII	GTYRAC	4 cut(s)	162, 459, 625, 1231
HindIII	AAGCTT	3 cut(s)	224, 434, 737
HinfI	GANTC	8 cut(s)	537, 695, 705, 826, 957, 1085, 1095, 1200
HpaI	GTTAAC	1 cut(s)	459
HpaII	CCGG	8 cut(s)	654, 660, 753, 893, 1269, 1347, 1436, 1625
HphI	GGTGA	6 cut(s)	419, 542, 788, 803, 1004, 1547
Hpy166II	GTNNAC	7 cut(s)	162, 459, 625, 854, 1168, 1231, 1622
Hpy188I	TCNGA	8 cut(s)	135, 147, 874, 956, 1090, 1292, 1334, 1644
Hpy188III	TCNNGA	6 cut(s)	241, 341, 374, 383, 491, 683
Hpy8I	GTNNAC	7 cut(s)	162, 459, 625, 854, 1168, 1231, 1622
Hpy99I	CGWCG	3 cut(s)	629, 678, 1208
HpyAV	CCTTC	8 cut(s)	247, 290, 527, 689, 788, 903, 1479, 1547
HpyCH4IV	ACGT	7 cut(s)	74, 673, 757, 1227, 1240, 1362, 1743
HpyCH4V	TGCA	4 cut(s)	351, 671, 915, 1391
HpyF10VI	GCNNNNNNNGC	5 cut(s)	102, 442, 665, 884, 1673
HpySE526I	ACGT	7 cut(s)	74, 673, 757, 1227, 1240, 1362, 1743
Hsp92I	GRCGYC	2 cut(s)	96, 1240
Hsp92II	CATG	6 cut(s)	319, 529, 649, 833, 988, 1102
HspAI	GCGC	3 cut(s)	96, 183, 762
KasI	GGCGCC	1 cut(s)	95
KspAI	GTTAAC	1 cut(s)	459
Kzo9I	GATC	9 cut(s)	214, 261, 379, 412, 522, 816, 1308, 1401, 1728
LmnI	GCTCC	6 cut(s)	650, 656, 665, 769, 1444, 1628
Lsp1109I	GCAGC	3 cut(s)	655, 1403, 1618
LweI	GCATC	1 cut(s)	41
MaeI	CTAG	3 cut(s)	44, 1481, 1757
MaeII	ACGT	7 cut(s)	74, 673, 757, 1227, 1240, 1362, 1743
MaeIII	GTNAC	4 cut(s)	563, 592, 1208, 1363
MalI	GATC	9 cut(s)	216, 263, 381, 414, 524, 818, 1310, 1403, 1730
MboI	GATC	9 cut(s)	214, 261, 379, 412, 522, 816, 1308, 1401, 1728
MflI	RGATCY	3 cut(s)	379, 412, 1728
MhlI	GDGCHC	2 cut(s)	1449, 1749
MluCI	AATT	2 cut(s)	150, 1244
Mly113I	GGCGCC	1 cut(s)	96
MlyI	GAGTC	3 cut(s)	689, 699, 820
MmeI	TCCRAC	1 cut(s)	1380
MseI	TTAA	7 cut(s)	81, 458, 861, 1035, 1119, 1545, 1659
MslI	CAYNNNNRTG	3 cut(s)	644, 983, 1511
MspA1I	CMGCKG	1 cut(s)	770
MspI	CCGG	8 cut(s)	654, 660, 753, 893, 1269, 1347, 1436, 1625
MspR9I	CCNGG	5 cut(s)	893, 906, 1047, 1347, 1626
MvaI	CCWGG	2 cut(s)	906, 1047
MvnI	CGCG	4 cut(s)	185, 260, 323, 599
MwoI	GCNNNNNNNGC	5 cut(s)	102, 442, 665, 884, 1673
NarI	GGCGCC	1 cut(s)	96
NciI	CCSGG	3 cut(s)	893, 1347, 1626
NcoI	CCATGG	1 cut(s)	645
NdeII	GATC	9 cut(s)	214, 261, 379, 412, 522, 816, 1308, 1401, 1728
NlaIII	CATG	6 cut(s)	319, 529, 649, 833, 988, 1102
NlaIV	GGNNCC	7 cut(s)	97, 118, 652, 658, 1051, 1072, 1730
OliI	CACNNNNGTG	1 cut(s)	1511
PceI	AGGCCT	1 cut(s)	1648
PfeI	GAWTC	5 cut(s)	537, 957, 1085, 1095, 1200
PflFI	GACNNNGTC	1 cut(s)	200
PkrI	GCNGC	5 cut(s)	95, 670, 1393, 1633, 1678
PleI	GAGTC	3 cut(s)	689, 699, 820
PluTI	GGCGCC	1 cut(s)	99
PpsI	GAGTC	3 cut(s)	689, 699, 820
Psp124BI	GAGCTC	1 cut(s)	1449
Psp6I	CCWGG	2 cut(s)	904, 1045
PspEI	GGTNACC	1 cut(s)	1208
PspGI	CCWGG	2 cut(s)	904, 1045
PspN4I	GGNNCC	7 cut(s)	97, 118, 652, 658, 1051, 1072, 1730
PspPI	GGNCC	6 cut(s)	116, 604, 1133, 1560, 1622, 1715
PsuI	RGATCY	3 cut(s)	379, 412, 1728
PsyI	GACNNNGTC	1 cut(s)	200
PvuII	CAGCTG	1 cut(s)	770
RsaI	GTAC	4 cut(s)	310, 368, 1273, 1478
RsaNI	GTAC	4 cut(s)	309, 367, 1272, 1477
RseI	CAYNNNNRTG	3 cut(s)	644, 983, 1511
SacI	GAGCTC	1 cut(s)	1449
SalI	GTCGAC	1 cut(s)	623
SaqAI	TTAA	7 cut(s)	81, 458, 861, 1035, 1119, 1545, 1659
SatI	GCNGC	5 cut(s)	94, 669, 1392, 1632, 1677
Sau3AI	GATC	9 cut(s)	214, 261, 379, 412, 522, 816, 1308, 1401, 1728
Sau96I	GGNCC	6 cut(s)	116, 604, 1133, 1560, 1622, 1715
SchI	GAGTC	3 cut(s)	689, 699, 820
ScrFI	CCNGG	5 cut(s)	893, 906, 1047, 1347, 1626
SduI	GDGCHC	2 cut(s)	1449, 1749
SfaNI	GCATC	1 cut(s)	41
SfcI	CTRYAG	2 cut(s)	1195, 1249
SfoI	GGCGCC	1 cut(s)	97
SinI	GGWCC	5 cut(s)	116, 1133, 1560, 1622, 1715
SmiMI	CAYNNNNRTG	3 cut(s)	644, 983, 1511
SmlI	CTYRAG	2 cut(s)	374, 383
SmoI	CTYRAG	2 cut(s)	374, 383
Sse9I	AATT	2 cut(s)	150, 1244
SseBI	AGGCCT	1 cut(s)	1648
SspDI	GGCGCC	1 cut(s)	95
SspMI	CTAG	3 cut(s)	44, 1481, 1757
SstI	GAGCTC	1 cut(s)	1449
StuI	AGGCCT	1 cut(s)	1648
StyD4I	CCNGG	5 cut(s)	891, 904, 1045, 1345, 1624
StyI	CCWWGG	5 cut(s)	172, 549, 645, 1480, 1652
TaiI	ACGT	7 cut(s)	77, 676, 760, 1230, 1243, 1365, 1746
TaqI	TCGA	8 cut(s)	195, 290, 501, 573, 624, 1083, 1203, 1449
TaqII	GACCGA	2 cut(s)	308, 1577
TasI	AATT	2 cut(s)	150, 1244
TauI	GCSGC	2 cut(s)	96, 1679
TfiI	GAWTC	5 cut(s)	537, 957, 1085, 1095, 1200
Tru1I	TTAA	7 cut(s)	81, 458, 861, 1035, 1119, 1545, 1659
Tru9I	TTAA	7 cut(s)	81, 458, 861, 1035, 1119, 1545, 1659
TscAI	CASTG	3 cut(s)	1072, 1132, 1281
TseI	GCWGC	3 cut(s)	668, 1391, 1631
TspDTI	ATGAA	8 cut(s)	332, 647, 960, 973, 1087, 1273, 1395, 1412
TspGWI	ACGGA	4 cut(s)	577, 1151, 1185, 1251
TspRI	CASTG	3 cut(s)	1072, 1132, 1281
Tth111I	GACNNNGTC	1 cut(s)	200
VpaK11BI	GGWCC	5 cut(s)	116, 1133, 1560, 1622, 1715
XcmI	CCANNNNNNNNNTGG	1 cut(s)	929
XmaJI	CCTAGG	1 cut(s)	1480
XmiI	GTMKAC	1 cut(s)	624
XspI	CTAG	3 cut(s)	44, 1481, 1757
ZraI	GACGTC	1 cut(s)	1241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.