Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009627.1

Orthogroup ID

OG0003768

Physical Location & Seq

Genomic Coordinates Forward (+)

4720 .. 6663

Gene Structure 1944 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009627.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

atggaaaagaaaggaaaggcaatagtaggtggaatttcaatcatccttgtggttggagcagtagttggttgtgtagctgttgtttcacataatcgcagcaaaggcaaggataggctttcgacgagttccaaggccgtcaatgcaatgtgtgaaccaactgattacaaggaagaatgcattgacagcctggctgacgctgccaagaatcaaagcgccaccccaaaagaacttatccgagctgccattgattacacaatcgataaggtgaaagcggcaatagagaaatcagatagcattatcaaagaagctaaaaatgtcagttccactgggaaaatggccttcaaggattgcaatgacttgttggaatcttcaatcgaaagtcttcaatattcgcttttgacactcgttgatactgaaatgcaaaacatgaataataaagaggctgatcttaagaactggttcagtgctgcgatatcatttcaggaatcatgcattgatgggattccatacgaagaccttaagaaccaaatgaacgaggcaatgctccatgcttcacaactgaccagcaacgccttagcaattgtgtcttcccttgctcccatcctaggcaaattcaatatctccatgaaaactgacagtaaaagttcaaccagtcgtcgtctcctggatgtagaaatggaaacggatgaacatggcacttttccagcatggttcccagctgcagataggaagctattcgcacaccacaacgagaacaataacaatagcagcaacgacgacgtcgacaacaacgacaacaacaacaacaacaacgggagagtcgacaacgacgacaacaacaacaacgggagagtcgacaacgacgacgacaacaacaacgggagagttacacccaacgcagtagtggcaaaagatgggagtggacaatacaaaacaattggtgaagctcttgctgcgtacccaaagggattccagggaagatatgttatatatgtgaaagctgggatttacaatgagtatgttactgtggccaagaatcaggtcaatgtgtacatgtatggagatggaccccggaggaccatgatcacaggcagtaaaagctttgctgatggcatcaccacccaggacactgccacattcatcgtaatggggaatgggttcattggtagagcaatgggatttcagaacacagccggccccgaaaagcatcaggcagtggcactccgagtccagtcggaaatgtcagccttcttcaactgcagaatggacgcctaccaagacacattgtacgtgcaagcatatcgccaattttatcgcaactgtgtcatatccggtaccgttgacttcatttttggtgactcatcaacagtcatccagaatagtttactcattgtaaggaagcctatggacggccaaaagaacattgtgactgctcatggaagaaaagataagcgggaaaccactggtctggttatccagaactgcaggatagtcccagaacaggctttgttcccaatgagattccagattcagtcatacttggggcggccgtggaagatgtactcgagaacagttatcatggagtccgaatttggggactttatccaaccagccggttggctagaatgggaagggacttttggactagacacactgtattatgcagagtatgcaaatcggggtccgggtgctgtaaccacaggaagggtaaaatggaacggataccatgtgattacggacagaaatgaggctcttcaattcactcccggtaattttctaacaggagaccaatggttgaaagacgcgggtataccttacttcctgggtttaaaaaactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0008150 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

612

Amino Acids

67.83

Weight (kDa)

5.67

Isoelectric Point (pI)

26.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003768)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47030 AT2G47040 AT2G47050 AT3G62170 AT3G62180 AT3G62180
fragaria_vesca	FvH4_1g26360 FvH4_4g21500
malus_domestica	MD16G1136400.v1.1 MD17G1283800.v1.1
prunus_persica	Prupe.1G105400_v2.0.a1 Prupe.3G003700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0486131 RchiOBHm_Chr4g0427511
rosa_laevigata	RLG00000007232 RLG00000023101
rosa_multiflora	Rmu_sc0001006.1_g000002 Rmu_sc0009627.1_g000001 Rmu_sc0017895.1_g000001 Rmu_sc0017895.1_g000002
rosa_roxburghii	Rroxscaffold_5G00369150 Rroxscaffold_6G00396030
rosa_rugosa	Rorug03G0223700 Rorug04G0218200
rosa_samantha	Rh3AG273500 Rh3BG308600 Rh3CG307100 Rh3DG303400 Rh4AG274700 Rh4BG280500 Rh4CG295800 Rh4DG277900
rosa_wichuraiana	Rw3G024240 Rw4G023810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	783
Acc65I	GGTACC	1 cut(s)	1334
AccB1I	GGYRCC	1 cut(s)	1334
AccI	GTMKAC	4 cut(s)	783, 822, 855, 1810
AccII	CGCG	1 cut(s)	1805
AciI	CCGC	4 cut(s)	272, 1453, 1546, 1805
AcoI	YGGCCR	3 cut(s)	1029, 1411, 1547
AcsI	RAATTY	3 cut(s)	33, 611, 1589
AcyI	GRCGYC	2 cut(s)	780, 1269
AfaI	GTAC	5 cut(s)	959, 1052, 1289, 1336, 1562
AfiI	CCNNNNNNNGG	5 cut(s)	605, 1409, 1501, 1593, 1704
AflII	CTTAAG	2 cut(s)	449, 518
AflIII	ACRYGT	1 cut(s)	1053
AgsI	TTSAA	9 cut(s)	39, 343, 372, 386, 616, 648, 1255, 1757, 1798
AjnI	CCWGG	5 cut(s)	186, 663, 972, 1122, 1821
AjuI	GAANNNNNNNTTGG	2 cut(s)	1623, 1655
AluBI	AGCT	8 cut(s)	77, 239, 308, 719, 733, 947, 1001, 1101
AluI	AGCT	8 cut(s)	77, 239, 308, 719, 733, 947, 1001, 1101
Alw26I	GTCTC	2 cut(s)	665, 1779
Ama87I	CYCGRG	1 cut(s)	1564
AoxI	GGCC	6 cut(s)	132, 336, 1029, 1195, 1411, 1547
ApeKI	GCWGC	7 cut(s)	96, 197, 239, 467, 719, 768, 953
ApoI	RAATTY	3 cut(s)	33, 611, 1589
ArsI	GACNNNNNNTTYG	2 cut(s)	1334, 1366
Asp700I	GAANNNNTTC	4 cut(s)	381, 458, 734, 1157
Asp718I	GGTACC	1 cut(s)	1334
AspA2I	CCTAGG	1 cut(s)	604
AspLEI	GCGC	1 cut(s)	215
AspS9I	GGNCC	4 cut(s)	1067, 1077, 1196, 1682
AsuC2I	CCSGG	3 cut(s)	1072, 1686, 1767
AsuHPI	GGTGA	4 cut(s)	277, 953, 1108, 1367
AvaI	CYCGRG	1 cut(s)	1564
AvaII	GGWCC	3 cut(s)	1067, 1077, 1682
AvrII	CCTAGG	1 cut(s)	604
BalI	TGGCCA	1 cut(s)	1031
BanI	GGYRCC	1 cut(s)	1334
BbsI	GAAGAC	3 cut(s)	374, 519, 579
BbvI	GCAGC	7 cut(s)	108, 184, 226, 454, 706, 780, 940
BccI	CCATC	5 cut(s)	491, 608, 908, 1058, 1103
BceAI	ACGGC	3 cut(s)	119, 1426, 1534
BcgI	CGANNNNNNTGC	2 cut(s)	1283, 1317
BciT130I	CCWGG	5 cut(s)	188, 665, 974, 1124, 1823
BciVI	GTATCC	1 cut(s)	1715
BclI	TGATCA	1 cut(s)	1083
BcnI	CCSGG	3 cut(s)	1072, 1686, 1767
BcoDI	GTCTC	2 cut(s)	665, 1779
BfaI	CTAG	4 cut(s)	605, 1622, 1646, 1837
BfmI	CTRYAG	3 cut(s)	720, 1258, 1483
BfoI	RGCGCY	1 cut(s)	216
BfrI	CTTAAG	2 cut(s)	449, 518
BfuI	GTATCC	1 cut(s)	1715
BisI	GCNGC	9 cut(s)	97, 198, 240, 273, 468, 720, 769, 954, 1547
BlnI	CCTAGG	1 cut(s)	604
BlsI	GCNGC	9 cut(s)	98, 199, 241, 274, 469, 721, 770, 955, 1548
Bme1390I	CCNGG	8 cut(s)	188, 665, 974, 1072, 1124, 1686, 1767, 1823
Bme18I	GGWCC	3 cut(s)	1067, 1077, 1682
BmeT110I	CYCGRG	1 cut(s)	1564
BmgT120I	GGNCC	4 cut(s)	1067, 1077, 1196, 1682
BmiI	GGNNCC	5 cut(s)	713, 1069, 1198, 1336, 1683
BmrFI	CCNGG	8 cut(s)	188, 665, 974, 1072, 1124, 1686, 1767, 1823
BmrI	ACTGGG	1 cut(s)	336
BmsI	GCATC	2 cut(s)	1122, 1216
BmuI	ACTGGG	1 cut(s)	336
BpiI	GAAGAC	3 cut(s)	374, 519, 579
Bpu10I	CCTNAGC	1 cut(s)	574
BpuMI	CCSGG	3 cut(s)	1072, 1686, 1767
Bsa29I	ATCGAT	1 cut(s)	258
BsaAI	YACGTR	1 cut(s)	1291
BsaHI	GRCGYC	2 cut(s)	780, 1269
BsaI	GGTCTC	1 cut(s)	1779
BsaJI	CCNNGG	7 cut(s)	129, 604, 973, 1070, 1122, 1550, 1822
BsaWI	WCCGGW	1 cut(s)	1331
BsaXI	ACNNNNNCTCC	2 cut(s)	48, 78
Bsc4I	CCNNNNNNNGG	5 cut(s)	605, 1409, 1501, 1593, 1704
Bse118I	RCCGGY	2 cut(s)	1193, 1613
Bse1I	ACTGG	5 cut(s)	331, 461, 651, 1231, 1468
Bse3DI	GCAATG	4 cut(s)	150, 358, 546, 1179
BseBI	CCWGG	5 cut(s)	188, 665, 974, 1124, 1823
BseCI	ATCGAT	1 cut(s)	258
BseDI	CCNNGG	7 cut(s)	129, 604, 973, 1070, 1122, 1550, 1822
BseGI	GGATG	5 cut(s)	42, 600, 673, 691, 1371
BseLI	CCNNNNNNNGG	5 cut(s)	605, 1409, 1501, 1593, 1704
BseMI	GCAATG	4 cut(s)	150, 358, 546, 1179
BseNI	ACTGG	5 cut(s)	331, 461, 651, 1231, 1468
BseX3I	CGGCCG	1 cut(s)	1547
BseXI	GCAGC	7 cut(s)	108, 184, 226, 454, 706, 780, 940
BseYI	CCCAGC	2 cut(s)	715, 1001
Bsh1236I	CGCG	1 cut(s)	1805
Bsh1285I	CGRYCG	1 cut(s)	1550
BshFI	GGCC	6 cut(s)	134, 338, 1031, 1197, 1413, 1549
BshNI	GGYRCC	1 cut(s)	1334
BshVI	ATCGAT	1 cut(s)	258
BsiEI	CGRYCG	1 cut(s)	1550
BsiHKCI	CYCGRG	1 cut(s)	1564
BsiSI	CCGG	6 cut(s)	1072, 1194, 1332, 1614, 1685, 1767
BslFI	GGGAC	3 cut(s)	1478, 1610, 1648
BslI	CCNNNNNNNGG	5 cut(s)	605, 1409, 1501, 1593, 1704
BsmAI	GTCTC	2 cut(s)	665, 1779
BsmBI	CGTCTC	1 cut(s)	665
BsmFI	GGGAC	3 cut(s)	1478, 1610, 1648
BsmI	GAATGC	1 cut(s)	179
BsnI	GGCC	6 cut(s)	134, 338, 1031, 1197, 1413, 1549
Bso31I	GGTCTC	1 cut(s)	1779
BsoBI	CYCGRG	1 cut(s)	1564
Bsp1407I	TGTACA	1 cut(s)	1050
Bsp143I	GATC	2 cut(s)	445, 1083
BspACI	CCGC	4 cut(s)	272, 1453, 1546, 1805
BspANI	GGCC	6 cut(s)	134, 338, 1031, 1197, 1413, 1549
BspDI	ATCGAT	1 cut(s)	258
BspFNI	CGCG	1 cut(s)	1805
BspLI	GGNNCC	5 cut(s)	713, 1069, 1198, 1336, 1683
BspMAI	CTGCAG	3 cut(s)	724, 1262, 1487
BspQI	GCTCTTC	1 cut(s)	1758
BspT107I	GGYRCC	1 cut(s)	1334
BspTI	CTTAAG	2 cut(s)	449, 518
BspTNI	GGTCTC	1 cut(s)	1779
BsrDI	GCAATG	4 cut(s)	150, 358, 546, 1179
BsrFI	RCCGGY	2 cut(s)	1193, 1613
BsrGI	TGTACA	1 cut(s)	1050
BsrI	ACTGG	5 cut(s)	331, 461, 651, 1231, 1468
BssAI	RCCGGY	2 cut(s)	1193, 1613
BssECI	CCNNGG	7 cut(s)	129, 604, 973, 1070, 1122, 1550, 1822
BssMI	GATC	2 cut(s)	445, 1083
BssNAI	GTATAC	1 cut(s)	1811
BssNI	GRCGYC	2 cut(s)	780, 1269
BssT1I	CCWWGG	2 cut(s)	129, 604
Bst1107I	GTATAC	1 cut(s)	1811
Bst2UI	CCWGG	5 cut(s)	188, 665, 974, 1124, 1823
Bst4CI	ACNGT	7 cut(s)	638, 1027, 1322, 1339, 1369, 1573, 1656
Bst6I	CTCTTC	1 cut(s)	1758
BstACI	GRCGYC	2 cut(s)	780, 1269
BstAFI	CTTAAG	2 cut(s)	449, 518
BstAPI	GCANNNNNTGC	1 cut(s)	1670
BstAUI	TGTACA	1 cut(s)	1050
BstBAI	YACGTR	1 cut(s)	1291
BstC8I	GCNNGC	2 cut(s)	1195, 1296
BstDEI	CTNAG	1 cut(s)	574
BstDSI	CCRYGG	1 cut(s)	1550
BstF5I	GGATG	5 cut(s)	42, 600, 673, 691, 1371
BstFNI	CGCG	1 cut(s)	1805
BstH2I	RGCGCY	1 cut(s)	216
BstHHI	GCGC	1 cut(s)	215
BstKTI	GATC	2 cut(s)	448, 1086
BstMAI	GTCTC	2 cut(s)	665, 1779
BstMBI	GATC	2 cut(s)	445, 1083
BstMCI	CGRYCG	1 cut(s)	1550
BstMWI	GCNNNNNNNGC	8 cut(s)	102, 140, 183, 197, 905, 953, 1098, 1670
BstNI	CCWGG	5 cut(s)	188, 665, 974, 1124, 1823
BstNSI	RCATGY	1 cut(s)	1057
BstSCI	CCNGG	8 cut(s)	186, 663, 972, 1070, 1122, 1684, 1765, 1821
BstSFI	CTRYAG	3 cut(s)	720, 1258, 1483
BstUI	CGCG	1 cut(s)	1805
BstV1I	GCAGC	7 cut(s)	108, 184, 226, 454, 706, 780, 940
BstV2I	GAAGAC	3 cut(s)	374, 519, 579
BstXI	CCANNNNNNTGG	2 cut(s)	1468, 1617
BstZ17I	GTATAC	1 cut(s)	1811
BstZI	CGGCCG	1 cut(s)	1547
Bsu15I	ATCGAT	1 cut(s)	258
BsuI	GTATCC	1 cut(s)	1715
BsuRI	GGCC	6 cut(s)	134, 338, 1031, 1197, 1413, 1549
BsuTUI	ATCGAT	1 cut(s)	258
BtgI	CCRYGG	1 cut(s)	1550
BtsCI	GGATG	5 cut(s)	42, 600, 673, 691, 1371
BtsI	GCAGTG	2 cut(s)	1128, 1221
BtsIMutI	CAGTG	6 cut(s)	324, 469, 1128, 1221, 1461, 1652
Cac8I	GCNNGC	2 cut(s)	1195, 1296
CfoI	GCGC	1 cut(s)	215
Cfr10I	RCCGGY	2 cut(s)	1193, 1613
Cfr13I	GGNCC	4 cut(s)	1067, 1077, 1196, 1682
ClaI	ATCGAT	1 cut(s)	258
CseI	GACGC	3 cut(s)	203, 1277, 1811
Csp6I	GTAC	5 cut(s)	958, 1051, 1288, 1335, 1561
CviQI	GTAC	5 cut(s)	958, 1051, 1288, 1335, 1561
DdeI	CTNAG	1 cut(s)	574
DpnI	GATC	2 cut(s)	447, 1085
DpnII	GATC	2 cut(s)	445, 1083
DraI	TTTAAA	1 cut(s)	1830
EaeI	YGGCCR	3 cut(s)	1029, 1411, 1547
EagI	CGGCCG	1 cut(s)	1547
Eam1104I	CTCTTC	1 cut(s)	1758
EarI	CTCTTC	1 cut(s)	1758
EclXI	CGGCCG	1 cut(s)	1547
Eco130I	CCWWGG	2 cut(s)	129, 604
Eco31I	GGTCTC	1 cut(s)	1779
Eco32I	GATATC	1 cut(s)	474
Eco47I	GGWCC	3 cut(s)	1067, 1077, 1682
Eco52I	CGGCCG	1 cut(s)	1547
Eco88I	CYCGRG	1 cut(s)	1564
EcoRII	CCWGG	5 cut(s)	186, 663, 972, 1122, 1821
EcoRV	GATATC	1 cut(s)	474
EcoT14I	CCWWGG	2 cut(s)	129, 604
EcoT22I	ATGCAT	2 cut(s)	179, 494
ErhI	CCWWGG	2 cut(s)	129, 604
Esp3I	CGTCTC	1 cut(s)	665
FaqI	GGGAC	3 cut(s)	1478, 1610, 1648
FauI	CCCGC	2 cut(s)	1446, 1798
FbaI	TGATCA	1 cut(s)	1083
FblI	GTMKAC	4 cut(s)	783, 822, 855, 1810
Fnu4HI	GCNGC	9 cut(s)	97, 198, 240, 273, 468, 720, 769, 954, 1547
FokI	GGATG	5 cut(s)	29, 587, 680, 698, 1358
Fsp4HI	GCNGC	9 cut(s)	97, 198, 240, 273, 468, 720, 769, 954, 1547
FspBI	CTAG	4 cut(s)	605, 1622, 1646, 1837
GlaI	GCGC	1 cut(s)	214
GluI	GCNGC	9 cut(s)	97, 198, 240, 273, 468, 720, 769, 954, 1547
GsaI	CCCAGC	2 cut(s)	719, 1005
HaeII	RGCGCY	1 cut(s)	216
HaeIII	GGCC	6 cut(s)	134, 338, 1031, 1197, 1413, 1549
HapII	CCGG	6 cut(s)	1072, 1194, 1332, 1614, 1685, 1767
HgaI	GACGC	3 cut(s)	203, 1277, 1811
HhaI	GCGC	1 cut(s)	215
Hin1I	GRCGYC	2 cut(s)	780, 1269
Hin6I	GCGC	1 cut(s)	213
HinP1I	GCGC	1 cut(s)	213
HincII	GTYRAC	4 cut(s)	784, 823, 856, 1342
HindII	GTYRAC	4 cut(s)	784, 823, 856, 1342
HindIII	AAGCTT	1 cut(s)	1099
HpaII	CCGG	6 cut(s)	1072, 1194, 1332, 1614, 1685, 1767
HphI	GGTGA	4 cut(s)	277, 953, 1108, 1367
Hpy166II	GTNNAC	9 cut(s)	152, 784, 823, 856, 923, 1051, 1342, 1385, 1811
Hpy188I	TCNGA	6 cut(s)	236, 289, 1185, 1226, 1237, 1588
Hpy188III	TCNNGA	5 cut(s)	482, 1375, 1477, 1525, 1566
Hpy8I	GTNNAC	9 cut(s)	152, 784, 823, 856, 923, 1051, 1342, 1385, 1811
Hpy99I	CGWCG	8 cut(s)	124, 660, 779, 782, 785, 833, 866, 869
HpyAV	CCTTC	4 cut(s)	349, 1258, 1625, 1698
HpyCH4III	ACNGT	7 cut(s)	638, 1027, 1322, 1339, 1369, 1573, 1656
HpyCH4IV	ACGT	2 cut(s)	780, 1290
HpyF10VI	GCNNNNNNNGC	8 cut(s)	102, 140, 183, 197, 905, 953, 1098, 1670
HpyF3I	CTNAG	1 cut(s)	574
HpySE526I	ACGT	2 cut(s)	780, 1290
Hsp92I	GRCGYC	2 cut(s)	780, 1269
HspAI	GCGC	1 cut(s)	213
KpnI	GGTACC	1 cut(s)	1338
KroI	GCCGGC	1 cut(s)	1193
KroNI	GCCGGC	1 cut(s)	1195
Ksp22I	TGATCA	1 cut(s)	1083
Kzo9I	GATC	2 cut(s)	445, 1083
LguI	GCTCTTC	1 cut(s)	1758
LmnI	GCTCC	3 cut(s)	56, 549, 601
Lsp1109I	GCAGC	7 cut(s)	108, 184, 226, 454, 706, 780, 940
LweI	GCATC	2 cut(s)	1122, 1216
MaeI	CTAG	4 cut(s)	605, 1622, 1646, 1837
MaeII	ACGT	2 cut(s)	780, 1290
MaeIII	GTNAC	5 cut(s)	886, 1021, 1355, 1426, 1693
MalI	GATC	2 cut(s)	447, 1085
MboI	GATC	2 cut(s)	445, 1083
MfeI	CAATTG	2 cut(s)	579, 936
MlsI	TGGCCA	1 cut(s)	1031
MluCI	AATT	8 cut(s)	33, 579, 611, 936, 1307, 1589, 1757, 1771
MluNI	TGGCCA	1 cut(s)	1031
MlyI	GAGTC	5 cut(s)	828, 861, 1236, 1352, 1592
MmeI	TCCRAC	4 cut(s)	34, 342, 1215, 1630
MnlI	CCTC	4 cut(s)	433, 529, 1068, 1741
Mox20I	TGGCCA	1 cut(s)	1031
Mph1103I	ATGCAT	2 cut(s)	179, 494
MroNI	GCCGGC	1 cut(s)	1193
MroXI	GAANNNNTTC	4 cut(s)	381, 458, 734, 1157
MscI	TGGCCA	1 cut(s)	1031
MseI	TTAA	3 cut(s)	450, 519, 1829
MslI	CAYNNNNRTG	2 cut(s)	47, 1145
Msp20I	TGGCCA	1 cut(s)	1031
MspA1I	CMGCKG	1 cut(s)	719
MspCI	CTTAAG	2 cut(s)	449, 518
MspI	CCGG	6 cut(s)	1072, 1194, 1332, 1614, 1685, 1767
MspR9I	CCNGG	8 cut(s)	188, 665, 974, 1072, 1124, 1686, 1767, 1823
MunI	CAATTG	2 cut(s)	579, 936
Mva1269I	GAATGC	1 cut(s)	179
MvaI	CCWGG	5 cut(s)	188, 665, 974, 1124, 1823
MvnI	CGCG	1 cut(s)	1805
MwoI	GCNNNNNNNGC	8 cut(s)	102, 140, 183, 197, 905, 953, 1098, 1670
NaeI	GCCGGC	1 cut(s)	1195
NciI	CCSGG	3 cut(s)	1072, 1686, 1767
NdeII	GATC	2 cut(s)	445, 1083
NgoMIV	GCCGGC	1 cut(s)	1193
NlaIV	GGNNCC	5 cut(s)	713, 1069, 1198, 1336, 1683
NmuCI	GTSAC	2 cut(s)	1355, 1426
NsiI	ATGCAT	2 cut(s)	179, 494
NspI	RCATGY	1 cut(s)	1057
PaeR7I	CTCGAG	1 cut(s)	1564
PciI	ACATGT	1 cut(s)	1053
PciSI	GCTCTTC	1 cut(s)	1758
PcsI	WCGNNNNNNNCGW	6 cut(s)	780, 789, 819, 828, 852, 861
PctI	GAATGC	1 cut(s)	179
PdiI	GCCGGC	1 cut(s)	1195
PdmI	GAANNNNTTC	4 cut(s)	381, 458, 734, 1157
PfeI	GAWTC	8 cut(s)	205, 365, 485, 502, 969, 1036, 1521, 1528
PflFI	GACNNNGTC	1 cut(s)	779
PfoI	TCCNGGA	1 cut(s)	663
PkrI	GCNGC	9 cut(s)	98, 199, 241, 274, 469, 721, 770, 955, 1548
PleI	GAGTC	5 cut(s)	827, 860, 1235, 1352, 1591
PpsI	GAGTC	5 cut(s)	827, 860, 1235, 1352, 1591
Ppu21I	YACGTR	1 cut(s)	1291
PscI	ACATGT	1 cut(s)	1053
Psp6I	CCWGG	5 cut(s)	186, 663, 972, 1122, 1821
PspFI	CCCAGC	2 cut(s)	715, 1001
PspGI	CCWGG	5 cut(s)	186, 663, 972, 1122, 1821
PspN4I	GGNNCC	5 cut(s)	713, 1069, 1198, 1336, 1683
PspPI	GGNCC	4 cut(s)	1067, 1077, 1196, 1682
PstI	CTGCAG	3 cut(s)	724, 1262, 1487
PsyI	GACNNNGTC	1 cut(s)	779
PvuII	CAGCTG	1 cut(s)	719
RsaI	GTAC	5 cut(s)	959, 1052, 1289, 1336, 1562
RsaNI	GTAC	5 cut(s)	958, 1051, 1288, 1335, 1561
RseI	CAYNNNNRTG	2 cut(s)	47, 1145
SalI	GTCGAC	3 cut(s)	782, 821, 854
SapI	GCTCTTC	1 cut(s)	1758
SaqAI	TTAA	3 cut(s)	450, 519, 1829
SatI	GCNGC	9 cut(s)	97, 198, 240, 273, 468, 720, 769, 954, 1547
Sau3AI	GATC	2 cut(s)	445, 1083
Sau96I	GGNCC	4 cut(s)	1067, 1077, 1196, 1682
SchI	GAGTC	5 cut(s)	828, 861, 1236, 1352, 1592
ScrFI	CCNGG	8 cut(s)	188, 665, 974, 1072, 1124, 1686, 1767, 1823
SfaNI	GCATC	2 cut(s)	1122, 1216
SfcI	CTRYAG	3 cut(s)	720, 1258, 1483
Sfr274I	CTCGAG	1 cut(s)	1564
SinI	GGWCC	3 cut(s)	1067, 1077, 1682
SlaI	CTCGAG	1 cut(s)	1564
SmiMI	CAYNNNNRTG	2 cut(s)	47, 1145
SmlI	CTYRAG	3 cut(s)	449, 518, 1564
SmoI	CTYRAG	3 cut(s)	449, 518, 1564
Sse9I	AATT	8 cut(s)	33, 579, 611, 936, 1307, 1589, 1757, 1771
SsiI	CCGC	4 cut(s)	272, 1453, 1546, 1805
SspI	AATATT	1 cut(s)	389
SspMI	CTAG	4 cut(s)	605, 1622, 1646, 1837
StyD4I	CCNGG	8 cut(s)	186, 663, 972, 1070, 1122, 1684, 1765, 1821
StyI	CCWWGG	2 cut(s)	129, 604
TaaI	ACNGT	7 cut(s)	638, 1027, 1322, 1339, 1369, 1573, 1656
TaiI	ACGT	2 cut(s)	783, 1293
TaqI	TCGA	7 cut(s)	119, 258, 375, 783, 822, 855, 1565
TasI	AATT	8 cut(s)	33, 579, 611, 936, 1307, 1589, 1757, 1771
TatI	WGTACW	2 cut(s)	1050, 1560
TauI	GCSGC	2 cut(s)	275, 1549
TfiI	GAWTC	8 cut(s)	205, 365, 485, 502, 969, 1036, 1521, 1528
Tru1I	TTAA	3 cut(s)	450, 519, 1829
Tru9I	TTAA	3 cut(s)	450, 519, 1829
TscAI	CASTG	6 cut(s)	331, 469, 1135, 1221, 1468, 1659
TseFI	GTSAC	2 cut(s)	1355, 1426
TseI	GCWGC	7 cut(s)	96, 197, 239, 467, 719, 768, 953
Tsp45I	GTSAC	2 cut(s)	1355, 1426
TspDTI	ATGAA	7 cut(s)	443, 545, 641, 702, 1129, 1150, 1336
TspGWI	ACGGA	3 cut(s)	698, 1734, 1751
TspRI	CASTG	6 cut(s)	331, 469, 1135, 1221, 1468, 1659
Tth111I	GACNNNGTC	1 cut(s)	779
Vha464I	CTTAAG	2 cut(s)	449, 518
VpaK11BI	GGWCC	3 cut(s)	1067, 1077, 1682
XapI	RAATTY	3 cut(s)	33, 611, 1589
XceI	RCATGY	1 cut(s)	1057
XcmI	CCANNNNNNNNNTGG	2 cut(s)	331, 901
XhoI	CTCGAG	1 cut(s)	1564
XmaJI	CCTAGG	1 cut(s)	604
XmiI	GTMKAC	4 cut(s)	783, 822, 855, 1810
XmnI	GAANNNNTTC	4 cut(s)	381, 458, 734, 1157
XspI	CTAG	4 cut(s)	605, 1622, 1646, 1837
ZraI	GACGTC	1 cut(s)	781
Zsp2I	ATGCAT	2 cut(s)	179, 494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.