Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001006.1

Orthogroup ID

OG0003768

Physical Location & Seq

Genomic Coordinates Reverse (-)

2123 .. 4075

Gene Structure 1953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001006.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

atggaaaagaagggaaaggcaatagtaggtggaatttcaatcatccttgtggttggagcagtagttggttgtgtagctgttgtttcacataatcgcagcaaaggcaaggataggctttcgacgagttccaaggccgtcaatgcaatgtgtgaaccaactgattacaaggaagaatgcattgacagcctggctgacgctgccaagaatcaaagcgccaccccaaaagaacttatccgagctgccattgattacacaatcgataaggtgaaagcggcaatagagaaatcagatagcattatcaaagaagctaaaaatgtcagttccactgggaaaatggccttcaaggattgcaatgacttgttggaatcttcaatcgaaagtcttcaatattcgcttttgacactcgttgatactgaaatgcaaaacatgaataataaagaggctgatcttaagaactggttcagtgctgcgatatcatttcaggaatcatgcattgatgggattccatacgaagaccttaagaaccaaatgaacgaggcaatgctccatgcttcacaactgaccagcaacgccttagcaattgtgtcttcccttgctcccatcctaggcaaattcaatatctccatgaaaactgacagtaaaagttcaaccagtcgtcgtctcctggatgtagaaatggaaacggatgaacatggcacttttccagcatggttcccagctgcagataggaagctattcgcacaccacaacgagaacaataacaatagcagcaacaacaacaacaacgacgacgtcgacaacaacgacaacaacaacaacaacgggagagtcgacaacgacgacaacaacaacaacgggagagtcgacaacgacgacgacaacaacaacgggagagttacacccaacgcagtagtggcaaaagatgggagtggacaatacaaaacaattggtgaagctcttgctgcgtacccaaagggattccagggaagatatgttatatatgtgaaagctgggatttacaatgagtatgttactgtggccaagaatcaggtcaatgtgtacatgtatggagatggaccccggaggaccatgatcacaggcagtaaaagctttgctgatggcatcaccacccaggacactgccacattcatcgtaatggggaatgggttcattggtagagcaatgggatttcagaacacagccggccccgaaaagcatcaggcagtggcactccgagtccagtcggaaatgtcagccttcttcaactgcagaatggacgcctaccaagacacattgtacgtgcaagcatatcgccaattttatcgcaactgtgtcatatccggtaccgttgacttcatttttggtgactcatcaacagtcatccagaatagtttactcattgtgaggaagcctatggacggccaaaagaacattgtgactgctcatggaagaaaagataagcgggaaaccactggtctggttatccagaactgcaggatagtcccagaacaggctttgttcccaatgagattccagattcagtcatacttggggcggccgtggaagatgtactcgagaacagttatcatggagtccgaatttggggactttatccaaccagccggttggctagaatgggaagggacttttggactagacacactgtattatgcagagtatgcaaatcggggtccgggtgctgtaaccacaggaagggtaaaatggaacggataccatgtgattacggacagaaatgaggctcttcaattcactcccggtaattttctaacaggagaccaatggttgaaagacgcgggtataccttacttcctgggtttaaaaaactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0008150 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

615

Amino Acids

68.18

Weight (kDa)

5.67

Isoelectric Point (pI)

26.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003768)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47030 AT2G47040 AT2G47050 AT3G62170 AT3G62180 AT3G62180
fragaria_vesca	FvH4_1g26360 FvH4_4g21500
malus_domestica	MD16G1136400.v1.1 MD17G1283800.v1.1
prunus_persica	Prupe.1G105400_v2.0.a1 Prupe.3G003700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0486131 RchiOBHm_Chr4g0427511
rosa_laevigata	RLG00000007232 RLG00000023101
rosa_multiflora	Rmu_sc0001006.1_g000002 Rmu_sc0009627.1_g000001 Rmu_sc0017895.1_g000001 Rmu_sc0017895.1_g000002
rosa_roxburghii	Rroxscaffold_5G00369150 Rroxscaffold_6G00396030
rosa_rugosa	Rorug03G0223700 Rorug04G0218200
rosa_samantha	Rh3AG273500 Rh3BG308600 Rh3CG307100 Rh3DG303400 Rh4AG274700 Rh4BG280500 Rh4CG295800 Rh4DG277900
rosa_wichuraiana	Rw3G024240 Rw4G023810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	795
Acc65I	GGTACC	1 cut(s)	1343
AccB1I	GGYRCC	1 cut(s)	1343
AccI	GTMKAC	4 cut(s)	795, 831, 864, 1819
AccII	CGCG	1 cut(s)	1814
AciI	CCGC	4 cut(s)	272, 1462, 1555, 1814
AcoI	YGGCCR	3 cut(s)	1038, 1420, 1556
AcsI	RAATTY	3 cut(s)	33, 611, 1598
AcyI	GRCGYC	2 cut(s)	792, 1278
AfaI	GTAC	5 cut(s)	968, 1061, 1298, 1345, 1571
AfiI	CCNNNNNNNGG	5 cut(s)	605, 1418, 1510, 1602, 1713
AflII	CTTAAG	2 cut(s)	449, 518
AflIII	ACRYGT	1 cut(s)	1062
AgsI	TTSAA	9 cut(s)	39, 343, 372, 386, 616, 648, 1264, 1766, 1807
AjnI	CCWGG	5 cut(s)	186, 663, 981, 1131, 1830
AjuI	GAANNNNNNNTTGG	2 cut(s)	1632, 1664
AluBI	AGCT	8 cut(s)	77, 239, 308, 719, 733, 956, 1010, 1110
AluI	AGCT	8 cut(s)	77, 239, 308, 719, 733, 956, 1010, 1110
Alw26I	GTCTC	2 cut(s)	665, 1788
Ama87I	CYCGRG	1 cut(s)	1573
AoxI	GGCC	6 cut(s)	132, 336, 1038, 1204, 1420, 1556
ApeKI	GCWGC	7 cut(s)	96, 197, 239, 467, 719, 768, 962
ApoI	RAATTY	3 cut(s)	33, 611, 1598
ArsI	GACNNNNNNTTYG	2 cut(s)	1343, 1375
Asp700I	GAANNNNTTC	4 cut(s)	381, 458, 734, 1166
Asp718I	GGTACC	1 cut(s)	1343
AspA2I	CCTAGG	1 cut(s)	604
AspLEI	GCGC	1 cut(s)	215
AspS9I	GGNCC	4 cut(s)	1076, 1086, 1205, 1691
AsuC2I	CCSGG	3 cut(s)	1081, 1695, 1776
AsuHPI	GGTGA	4 cut(s)	277, 962, 1117, 1376
AvaI	CYCGRG	1 cut(s)	1573
AvaII	GGWCC	3 cut(s)	1076, 1086, 1691
AvrII	CCTAGG	1 cut(s)	604
BalI	TGGCCA	1 cut(s)	1040
BanI	GGYRCC	1 cut(s)	1343
BbsI	GAAGAC	3 cut(s)	374, 519, 579
BbvI	GCAGC	7 cut(s)	108, 184, 226, 454, 706, 780, 949
BccI	CCATC	5 cut(s)	491, 608, 917, 1067, 1112
BceAI	ACGGC	3 cut(s)	119, 1435, 1543
BcgI	CGANNNNNNTGC	2 cut(s)	1292, 1326
BciT130I	CCWGG	5 cut(s)	188, 665, 983, 1133, 1832
BciVI	GTATCC	1 cut(s)	1724
BclI	TGATCA	1 cut(s)	1092
BcnI	CCSGG	3 cut(s)	1081, 1695, 1776
BcoDI	GTCTC	2 cut(s)	665, 1788
BfaI	CTAG	4 cut(s)	605, 1631, 1655, 1846
BfmI	CTRYAG	3 cut(s)	720, 1267, 1492
BfoI	RGCGCY	1 cut(s)	216
BfrI	CTTAAG	2 cut(s)	449, 518
BfuI	GTATCC	1 cut(s)	1724
BisI	GCNGC	9 cut(s)	97, 198, 240, 273, 468, 720, 769, 963, 1556
BlnI	CCTAGG	1 cut(s)	604
BlsI	GCNGC	9 cut(s)	98, 199, 241, 274, 469, 721, 770, 964, 1557
Bme1390I	CCNGG	8 cut(s)	188, 665, 983, 1081, 1133, 1695, 1776, 1832
Bme18I	GGWCC	3 cut(s)	1076, 1086, 1691
BmeT110I	CYCGRG	1 cut(s)	1573
BmgT120I	GGNCC	4 cut(s)	1076, 1086, 1205, 1691
BmiI	GGNNCC	5 cut(s)	713, 1078, 1207, 1345, 1692
BmrFI	CCNGG	8 cut(s)	188, 665, 983, 1081, 1133, 1695, 1776, 1832
BmrI	ACTGGG	1 cut(s)	336
BmsI	GCATC	2 cut(s)	1131, 1225
BmuI	ACTGGG	1 cut(s)	336
BpiI	GAAGAC	3 cut(s)	374, 519, 579
Bpu10I	CCTNAGC	1 cut(s)	574
BpuMI	CCSGG	3 cut(s)	1081, 1695, 1776
Bsa29I	ATCGAT	1 cut(s)	258
BsaAI	YACGTR	1 cut(s)	1300
BsaHI	GRCGYC	2 cut(s)	792, 1278
BsaI	GGTCTC	1 cut(s)	1788
BsaJI	CCNNGG	7 cut(s)	129, 604, 982, 1079, 1131, 1559, 1831
BsaWI	WCCGGW	1 cut(s)	1340
BsaXI	ACNNNNNCTCC	2 cut(s)	48, 78
Bsc4I	CCNNNNNNNGG	5 cut(s)	605, 1418, 1510, 1602, 1713
Bse118I	RCCGGY	2 cut(s)	1202, 1622
Bse1I	ACTGG	5 cut(s)	331, 461, 651, 1240, 1477
Bse3DI	GCAATG	4 cut(s)	150, 358, 546, 1188
BseBI	CCWGG	5 cut(s)	188, 665, 983, 1133, 1832
BseCI	ATCGAT	1 cut(s)	258
BseDI	CCNNGG	7 cut(s)	129, 604, 982, 1079, 1131, 1559, 1831
BseGI	GGATG	5 cut(s)	42, 600, 673, 691, 1380
BseLI	CCNNNNNNNGG	5 cut(s)	605, 1418, 1510, 1602, 1713
BseMI	GCAATG	4 cut(s)	150, 358, 546, 1188
BseNI	ACTGG	5 cut(s)	331, 461, 651, 1240, 1477
BseX3I	CGGCCG	1 cut(s)	1556
BseXI	GCAGC	7 cut(s)	108, 184, 226, 454, 706, 780, 949
BseYI	CCCAGC	2 cut(s)	715, 1010
Bsh1236I	CGCG	1 cut(s)	1814
Bsh1285I	CGRYCG	1 cut(s)	1559
BshFI	GGCC	6 cut(s)	134, 338, 1040, 1206, 1422, 1558
BshNI	GGYRCC	1 cut(s)	1343
BshVI	ATCGAT	1 cut(s)	258
BsiEI	CGRYCG	1 cut(s)	1559
BsiHKCI	CYCGRG	1 cut(s)	1573
BsiSI	CCGG	6 cut(s)	1081, 1203, 1341, 1623, 1694, 1776
BslFI	GGGAC	3 cut(s)	1487, 1619, 1657
BslI	CCNNNNNNNGG	5 cut(s)	605, 1418, 1510, 1602, 1713
BsmAI	GTCTC	2 cut(s)	665, 1788
BsmBI	CGTCTC	1 cut(s)	665
BsmFI	GGGAC	3 cut(s)	1487, 1619, 1657
BsmI	GAATGC	1 cut(s)	179
BsnI	GGCC	6 cut(s)	134, 338, 1040, 1206, 1422, 1558
Bso31I	GGTCTC	1 cut(s)	1788
BsoBI	CYCGRG	1 cut(s)	1573
Bsp1407I	TGTACA	1 cut(s)	1059
Bsp143I	GATC	2 cut(s)	445, 1092
BspACI	CCGC	4 cut(s)	272, 1462, 1555, 1814
BspANI	GGCC	6 cut(s)	134, 338, 1040, 1206, 1422, 1558
BspDI	ATCGAT	1 cut(s)	258
BspFNI	CGCG	1 cut(s)	1814
BspLI	GGNNCC	5 cut(s)	713, 1078, 1207, 1345, 1692
BspMAI	CTGCAG	3 cut(s)	724, 1271, 1496
BspQI	GCTCTTC	1 cut(s)	1767
BspT107I	GGYRCC	1 cut(s)	1343
BspTI	CTTAAG	2 cut(s)	449, 518
BspTNI	GGTCTC	1 cut(s)	1788
BsrDI	GCAATG	4 cut(s)	150, 358, 546, 1188
BsrFI	RCCGGY	2 cut(s)	1202, 1622
BsrGI	TGTACA	1 cut(s)	1059
BsrI	ACTGG	5 cut(s)	331, 461, 651, 1240, 1477
BssAI	RCCGGY	2 cut(s)	1202, 1622
BssECI	CCNNGG	7 cut(s)	129, 604, 982, 1079, 1131, 1559, 1831
BssMI	GATC	2 cut(s)	445, 1092
BssNAI	GTATAC	1 cut(s)	1820
BssNI	GRCGYC	2 cut(s)	792, 1278
BssT1I	CCWWGG	2 cut(s)	129, 604
Bst1107I	GTATAC	1 cut(s)	1820
Bst2UI	CCWGG	5 cut(s)	188, 665, 983, 1133, 1832
Bst4CI	ACNGT	7 cut(s)	638, 1036, 1331, 1348, 1378, 1582, 1665
Bst6I	CTCTTC	1 cut(s)	1767
BstACI	GRCGYC	2 cut(s)	792, 1278
BstAFI	CTTAAG	2 cut(s)	449, 518
BstAPI	GCANNNNNTGC	1 cut(s)	1679
BstAUI	TGTACA	1 cut(s)	1059
BstBAI	YACGTR	1 cut(s)	1300
BstC8I	GCNNGC	2 cut(s)	1204, 1305
BstDEI	CTNAG	1 cut(s)	574
BstDSI	CCRYGG	1 cut(s)	1559
BstF5I	GGATG	5 cut(s)	42, 600, 673, 691, 1380
BstFNI	CGCG	1 cut(s)	1814
BstH2I	RGCGCY	1 cut(s)	216
BstHHI	GCGC	1 cut(s)	215
BstKTI	GATC	2 cut(s)	448, 1095
BstMAI	GTCTC	2 cut(s)	665, 1788
BstMBI	GATC	2 cut(s)	445, 1092
BstMCI	CGRYCG	1 cut(s)	1559
BstMWI	GCNNNNNNNGC	8 cut(s)	102, 140, 183, 197, 914, 962, 1107, 1679
BstNI	CCWGG	5 cut(s)	188, 665, 983, 1133, 1832
BstNSI	RCATGY	1 cut(s)	1066
BstSCI	CCNGG	8 cut(s)	186, 663, 981, 1079, 1131, 1693, 1774, 1830
BstSFI	CTRYAG	3 cut(s)	720, 1267, 1492
BstUI	CGCG	1 cut(s)	1814
BstV1I	GCAGC	7 cut(s)	108, 184, 226, 454, 706, 780, 949
BstV2I	GAAGAC	3 cut(s)	374, 519, 579
BstXI	CCANNNNNNTGG	2 cut(s)	1477, 1626
BstZ17I	GTATAC	1 cut(s)	1820
BstZI	CGGCCG	1 cut(s)	1556
Bsu15I	ATCGAT	1 cut(s)	258
BsuI	GTATCC	1 cut(s)	1724
BsuRI	GGCC	6 cut(s)	134, 338, 1040, 1206, 1422, 1558
BsuTUI	ATCGAT	1 cut(s)	258
BtgI	CCRYGG	1 cut(s)	1559
BtsCI	GGATG	5 cut(s)	42, 600, 673, 691, 1380
BtsI	GCAGTG	2 cut(s)	1137, 1230
BtsIMutI	CAGTG	6 cut(s)	324, 469, 1137, 1230, 1470, 1661
Cac8I	GCNNGC	2 cut(s)	1204, 1305
CfoI	GCGC	1 cut(s)	215
Cfr10I	RCCGGY	2 cut(s)	1202, 1622
Cfr13I	GGNCC	4 cut(s)	1076, 1086, 1205, 1691
ClaI	ATCGAT	1 cut(s)	258
CseI	GACGC	3 cut(s)	203, 1286, 1820
Csp6I	GTAC	5 cut(s)	967, 1060, 1297, 1344, 1570
CviQI	GTAC	5 cut(s)	967, 1060, 1297, 1344, 1570
DdeI	CTNAG	1 cut(s)	574
DpnI	GATC	2 cut(s)	447, 1094
DpnII	GATC	2 cut(s)	445, 1092
DraI	TTTAAA	1 cut(s)	1839
EaeI	YGGCCR	3 cut(s)	1038, 1420, 1556
EagI	CGGCCG	1 cut(s)	1556
Eam1104I	CTCTTC	1 cut(s)	1767
EarI	CTCTTC	1 cut(s)	1767
EclXI	CGGCCG	1 cut(s)	1556
Eco130I	CCWWGG	2 cut(s)	129, 604
Eco31I	GGTCTC	1 cut(s)	1788
Eco32I	GATATC	1 cut(s)	474
Eco47I	GGWCC	3 cut(s)	1076, 1086, 1691
Eco52I	CGGCCG	1 cut(s)	1556
Eco88I	CYCGRG	1 cut(s)	1573
EcoRII	CCWGG	5 cut(s)	186, 663, 981, 1131, 1830
EcoRV	GATATC	1 cut(s)	474
EcoT14I	CCWWGG	2 cut(s)	129, 604
EcoT22I	ATGCAT	2 cut(s)	179, 494
ErhI	CCWWGG	2 cut(s)	129, 604
Esp3I	CGTCTC	1 cut(s)	665
FaqI	GGGAC	3 cut(s)	1487, 1619, 1657
FauI	CCCGC	2 cut(s)	1455, 1807
FbaI	TGATCA	1 cut(s)	1092
FblI	GTMKAC	4 cut(s)	795, 831, 864, 1819
Fnu4HI	GCNGC	9 cut(s)	97, 198, 240, 273, 468, 720, 769, 963, 1556
FokI	GGATG	5 cut(s)	29, 587, 680, 698, 1367
Fsp4HI	GCNGC	9 cut(s)	97, 198, 240, 273, 468, 720, 769, 963, 1556
FspBI	CTAG	4 cut(s)	605, 1631, 1655, 1846
GlaI	GCGC	1 cut(s)	214
GluI	GCNGC	9 cut(s)	97, 198, 240, 273, 468, 720, 769, 963, 1556
GsaI	CCCAGC	2 cut(s)	719, 1014
HaeII	RGCGCY	1 cut(s)	216
HaeIII	GGCC	6 cut(s)	134, 338, 1040, 1206, 1422, 1558
HapII	CCGG	6 cut(s)	1081, 1203, 1341, 1623, 1694, 1776
HgaI	GACGC	3 cut(s)	203, 1286, 1820
HhaI	GCGC	1 cut(s)	215
Hin1I	GRCGYC	2 cut(s)	792, 1278
Hin6I	GCGC	1 cut(s)	213
HinP1I	GCGC	1 cut(s)	213
HincII	GTYRAC	4 cut(s)	796, 832, 865, 1351
HindII	GTYRAC	4 cut(s)	796, 832, 865, 1351
HindIII	AAGCTT	1 cut(s)	1108
HpaII	CCGG	6 cut(s)	1081, 1203, 1341, 1623, 1694, 1776
HphI	GGTGA	4 cut(s)	277, 962, 1117, 1376
Hpy166II	GTNNAC	9 cut(s)	152, 796, 832, 865, 932, 1060, 1351, 1394, 1820
Hpy188I	TCNGA	6 cut(s)	236, 289, 1194, 1235, 1246, 1597
Hpy188III	TCNNGA	5 cut(s)	482, 1384, 1486, 1534, 1575
Hpy8I	GTNNAC	9 cut(s)	152, 796, 832, 865, 932, 1060, 1351, 1394, 1820
Hpy99I	CGWCG	8 cut(s)	124, 660, 791, 794, 797, 842, 875, 878
HpyAV	CCTTC	5 cut(s)	4, 349, 1267, 1634, 1707
HpyCH4III	ACNGT	7 cut(s)	638, 1036, 1331, 1348, 1378, 1582, 1665
HpyCH4IV	ACGT	2 cut(s)	792, 1299
HpyF10VI	GCNNNNNNNGC	8 cut(s)	102, 140, 183, 197, 914, 962, 1107, 1679
HpyF3I	CTNAG	1 cut(s)	574
HpySE526I	ACGT	2 cut(s)	792, 1299
Hsp92I	GRCGYC	2 cut(s)	792, 1278
HspAI	GCGC	1 cut(s)	213
KpnI	GGTACC	1 cut(s)	1347
KroI	GCCGGC	1 cut(s)	1202
KroNI	GCCGGC	1 cut(s)	1204
Ksp22I	TGATCA	1 cut(s)	1092
Kzo9I	GATC	2 cut(s)	445, 1092
LguI	GCTCTTC	1 cut(s)	1767
LmnI	GCTCC	3 cut(s)	56, 549, 601
Lsp1109I	GCAGC	7 cut(s)	108, 184, 226, 454, 706, 780, 949
LweI	GCATC	2 cut(s)	1131, 1225
MaeI	CTAG	4 cut(s)	605, 1631, 1655, 1846
MaeII	ACGT	2 cut(s)	792, 1299
MaeIII	GTNAC	5 cut(s)	895, 1030, 1364, 1435, 1702
MalI	GATC	2 cut(s)	447, 1094
MboI	GATC	2 cut(s)	445, 1092
MfeI	CAATTG	2 cut(s)	579, 945
MlsI	TGGCCA	1 cut(s)	1040
MluCI	AATT	8 cut(s)	33, 579, 611, 945, 1316, 1598, 1766, 1780
MluNI	TGGCCA	1 cut(s)	1040
MlyI	GAGTC	5 cut(s)	837, 870, 1245, 1361, 1601
MmeI	TCCRAC	4 cut(s)	34, 342, 1224, 1639
MnlI	CCTC	5 cut(s)	433, 529, 1077, 1398, 1750
Mox20I	TGGCCA	1 cut(s)	1040
Mph1103I	ATGCAT	2 cut(s)	179, 494
MroNI	GCCGGC	1 cut(s)	1202
MroXI	GAANNNNTTC	4 cut(s)	381, 458, 734, 1166
MscI	TGGCCA	1 cut(s)	1040
MseI	TTAA	3 cut(s)	450, 519, 1838
MslI	CAYNNNNRTG	2 cut(s)	47, 1154
Msp20I	TGGCCA	1 cut(s)	1040
MspA1I	CMGCKG	1 cut(s)	719
MspCI	CTTAAG	2 cut(s)	449, 518
MspI	CCGG	6 cut(s)	1081, 1203, 1341, 1623, 1694, 1776
MspR9I	CCNGG	8 cut(s)	188, 665, 983, 1081, 1133, 1695, 1776, 1832
MunI	CAATTG	2 cut(s)	579, 945
Mva1269I	GAATGC	1 cut(s)	179
MvaI	CCWGG	5 cut(s)	188, 665, 983, 1133, 1832
MvnI	CGCG	1 cut(s)	1814
MwoI	GCNNNNNNNGC	8 cut(s)	102, 140, 183, 197, 914, 962, 1107, 1679
NaeI	GCCGGC	1 cut(s)	1204
NciI	CCSGG	3 cut(s)	1081, 1695, 1776
NdeII	GATC	2 cut(s)	445, 1092
NgoMIV	GCCGGC	1 cut(s)	1202
NlaIV	GGNNCC	5 cut(s)	713, 1078, 1207, 1345, 1692
NmuCI	GTSAC	2 cut(s)	1364, 1435
NsiI	ATGCAT	2 cut(s)	179, 494
NspI	RCATGY	1 cut(s)	1066
PaeR7I	CTCGAG	1 cut(s)	1573
PciI	ACATGT	1 cut(s)	1062
PciSI	GCTCTTC	1 cut(s)	1767
PcsI	WCGNNNNNNNCGW	6 cut(s)	792, 801, 828, 837, 861, 870
PctI	GAATGC	1 cut(s)	179
PdiI	GCCGGC	1 cut(s)	1204
PdmI	GAANNNNTTC	4 cut(s)	381, 458, 734, 1166
PfeI	GAWTC	8 cut(s)	205, 365, 485, 502, 978, 1045, 1530, 1537
PflFI	GACNNNGTC	1 cut(s)	791
PfoI	TCCNGGA	1 cut(s)	663
PkrI	GCNGC	9 cut(s)	98, 199, 241, 274, 469, 721, 770, 964, 1557
PleI	GAGTC	5 cut(s)	836, 869, 1244, 1361, 1600
PpsI	GAGTC	5 cut(s)	836, 869, 1244, 1361, 1600
Ppu21I	YACGTR	1 cut(s)	1300
PscI	ACATGT	1 cut(s)	1062
Psp6I	CCWGG	5 cut(s)	186, 663, 981, 1131, 1830
PspFI	CCCAGC	2 cut(s)	715, 1010
PspGI	CCWGG	5 cut(s)	186, 663, 981, 1131, 1830
PspN4I	GGNNCC	5 cut(s)	713, 1078, 1207, 1345, 1692
PspPI	GGNCC	4 cut(s)	1076, 1086, 1205, 1691
PstI	CTGCAG	3 cut(s)	724, 1271, 1496
PsyI	GACNNNGTC	1 cut(s)	791
PvuII	CAGCTG	1 cut(s)	719
RsaI	GTAC	5 cut(s)	968, 1061, 1298, 1345, 1571
RsaNI	GTAC	5 cut(s)	967, 1060, 1297, 1344, 1570
RseI	CAYNNNNRTG	2 cut(s)	47, 1154
SalI	GTCGAC	3 cut(s)	794, 830, 863
SapI	GCTCTTC	1 cut(s)	1767
SaqAI	TTAA	3 cut(s)	450, 519, 1838
SatI	GCNGC	9 cut(s)	97, 198, 240, 273, 468, 720, 769, 963, 1556
Sau3AI	GATC	2 cut(s)	445, 1092
Sau96I	GGNCC	4 cut(s)	1076, 1086, 1205, 1691
SchI	GAGTC	5 cut(s)	837, 870, 1245, 1361, 1601
ScrFI	CCNGG	8 cut(s)	188, 665, 983, 1081, 1133, 1695, 1776, 1832
SfaNI	GCATC	2 cut(s)	1131, 1225
SfcI	CTRYAG	3 cut(s)	720, 1267, 1492
Sfr274I	CTCGAG	1 cut(s)	1573
SinI	GGWCC	3 cut(s)	1076, 1086, 1691
SlaI	CTCGAG	1 cut(s)	1573
SmiMI	CAYNNNNRTG	2 cut(s)	47, 1154
SmlI	CTYRAG	3 cut(s)	449, 518, 1573
SmoI	CTYRAG	3 cut(s)	449, 518, 1573
Sse9I	AATT	8 cut(s)	33, 579, 611, 945, 1316, 1598, 1766, 1780
SsiI	CCGC	4 cut(s)	272, 1462, 1555, 1814
SspI	AATATT	1 cut(s)	389
SspMI	CTAG	4 cut(s)	605, 1631, 1655, 1846
StyD4I	CCNGG	8 cut(s)	186, 663, 981, 1079, 1131, 1693, 1774, 1830
StyI	CCWWGG	2 cut(s)	129, 604
TaaI	ACNGT	7 cut(s)	638, 1036, 1331, 1348, 1378, 1582, 1665
TaiI	ACGT	2 cut(s)	795, 1302
TaqI	TCGA	7 cut(s)	119, 258, 375, 795, 831, 864, 1574
TasI	AATT	8 cut(s)	33, 579, 611, 945, 1316, 1598, 1766, 1780
TatI	WGTACW	2 cut(s)	1059, 1569
TauI	GCSGC	2 cut(s)	275, 1558
TfiI	GAWTC	8 cut(s)	205, 365, 485, 502, 978, 1045, 1530, 1537
Tru1I	TTAA	3 cut(s)	450, 519, 1838
Tru9I	TTAA	3 cut(s)	450, 519, 1838
TscAI	CASTG	6 cut(s)	331, 469, 1144, 1230, 1477, 1668
TseFI	GTSAC	2 cut(s)	1364, 1435
TseI	GCWGC	7 cut(s)	96, 197, 239, 467, 719, 768, 962
Tsp45I	GTSAC	2 cut(s)	1364, 1435
TspDTI	ATGAA	7 cut(s)	443, 545, 641, 702, 1138, 1159, 1345
TspGWI	ACGGA	3 cut(s)	698, 1743, 1760
TspRI	CASTG	6 cut(s)	331, 469, 1144, 1230, 1477, 1668
Tth111I	GACNNNGTC	1 cut(s)	791
Vha464I	CTTAAG	2 cut(s)	449, 518
VpaK11BI	GGWCC	3 cut(s)	1076, 1086, 1691
XapI	RAATTY	3 cut(s)	33, 611, 1598
XceI	RCATGY	1 cut(s)	1066
XcmI	CCANNNNNNNNNTGG	2 cut(s)	331, 910
XhoI	CTCGAG	1 cut(s)	1573
XmaJI	CCTAGG	1 cut(s)	604
XmiI	GTMKAC	4 cut(s)	795, 831, 864, 1819
XmnI	GAANNNNTTC	4 cut(s)	381, 458, 734, 1166
XspI	CTAG	4 cut(s)	605, 1631, 1655, 1846
ZraI	GACGTC	1 cut(s)	793
Zsp2I	ATGCAT	2 cut(s)	179, 494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.