Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0003768

Physical Location & Seq

Genomic Coordinates Reverse (-)

14767305 .. 14769229

Gene Structure 1925 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007232

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGAAAAGAAGGGAAAGGCAATAGTAGGTGGAATTTCAATCATCCTTGTGGTTGGAGCAGTAGTTGGTTGTGTAGCTGTTGTTTCACATAATCGCAGCAAAGGCAAGGATAGGCTTTCGACGAGTTCCAAGGCCGTCACTGCAATGTGTGAACCAACTGATTACAAGGAAGAATGCATTAACAGCCTGGCTGACGCTGCCAAGAATCAAAGCGCCACCCCAAAAGAACTTATCCGAGCCGCCATTGATTACACAATCGATAAGGTGAAAGCGGCAATAGAGAAATCTGGTAGCATTATCAAAGAAGCTAAAAATGTCAATTCCACTGGAAAAATGGCCTTCGAGGATTGCAATGACTTGTTGGAATCTTCAATCGAAAGTCTTCAATATTCGCTTTTGACACTCGTTGATACTGAAATGCAAAACATGAATAATAAAGAGGCTGATCTTAAGAACTGGTTCAGTGCTGCGATATCATTTCAGGAATCATGCATTGATGGGATTCCATACGAGGACCTTAAGAACCAAATGAACGAGGCGATGCTCCATGGTTCACAACTGACCAGCAACGCCTTAGCAATTGTGTCTTCCCTTGCTCCCATCCTAGGCAAATTCAATATCTCCATGAAAACTGACAGTAAAAGTTCAACCAGTCGTCGTCTCCTGGATGTAGAAATGGAAACGGATGAACATGGCACTTTTCCAGCATGGTTCCCAGCTGCAGATAGGAAGCTATTCGCACACCACAACAAGAACAATAACAATAGCAGCAGCAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACGACAACGACGACAACAACAACAACAACAACGGGAGAGTTACACCCAACGCAGTAGTGGCAAAAGATGGGAGTGGACAATACCAAACAATTGGTGAAGCTCTTGCTGCGTACCCAAAGGGATTCCAGGGAAGATATGTTATATATGTGAAAGCTGGGATTTACAATGAGTATGTTACTGTGGCCAAGAATCAGATCAATGTGTACATGTATGGAGATGGACCCCGGAGGACCATGATCACAGGTAGTAAAAGCTTTGCTGATGGCATCACCACCCAGGACACTGCCACATTCATCGTAATGGGGCATGGGTTCATTGGTAGAGCAATGGGATTTCAGAACACAGCCGGCCCCGAAAAGCATCAGGCAGTGGCACTCCGAGTCCAGTCGGAAATGTCAGCCTTCTTCAACTGCAGAATGGACGCTTACCAAGACACTTTGTACGTGCAAGCATATCGCCAATTTTATCGCAACTGTGTCATATCCGGTACCGTTGACTTCATTTTTGGTGACTCATCAACAGTCATCCAGAATAGTTTACTCATTGTGAGGAAGCCTATGAACGGCCAAAAGAACATTGTGACTGCTCATGGAAGAAAAGATAAGCGGGAAACCACTGGTCTGGTTATCCAGAACTGCAGGATAGTCCCAGAACAGGCTTTGTTCCCAGTGAGATTCCAGATTCAGTCATACTTGGGGCGGCCGTGGAAGATGTACTCGAGAACAGTTATCATGGAGTCCGAATTTGGGGACTTTATCCAACCAGCCGGTTGGCTAGAATGGCAAGGGACTTTTGGACTAGACACACTGTATTATGCAGAGTATGCAAATCGGGGTCCGGGTGCTGTAACCACAGGAAGGGTAAAATGGAAAGGATACCATGTGATTACGGACAAAAATGAGGCTCTTCAATTCACTCCGGGTAATTTTCTAACAGGAGACCAATGGTTGAAAGACACGGGTGTACCTTACTTCCTGGGTTTAAAAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0008150 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

603

Amino Acids

66.68

Weight (kDa)

7.95

Isoelectric Point (pI)

28.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	45 - 194	2.5e-29	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	289 - 586	1.3e-135	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003768)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47030 AT2G47040 AT2G47050 AT3G62170 AT3G62180 AT3G62180
fragaria_vesca	FvH4_1g26360 FvH4_4g21500
malus_domestica	MD16G1136400.v1.1 MD17G1283800.v1.1
prunus_persica	Prupe.1G105400_v2.0.a1 Prupe.3G003700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0486131 RchiOBHm_Chr4g0427511
rosa_laevigata	RLG00000007232 RLG00000023101
rosa_multiflora	Rmu_sc0001006.1_g000002 Rmu_sc0009627.1_g000001 Rmu_sc0017895.1_g000001 Rmu_sc0017895.1_g000002
rosa_roxburghii	Rroxscaffold_5G00369150 Rroxscaffold_6G00396030
rosa_rugosa	Rorug03G0223700 Rorug04G0218200
rosa_samantha	Rh3AG273500 Rh3BG308600 Rh3CG307100 Rh3DG303400 Rh4AG274700 Rh4BG280500 Rh4CG295800 Rh4DG277900
rosa_wichuraiana	Rw3G024240 Rw4G023810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1304
AccB1I	GGYRCC	1 cut(s)	1304
AciI	CCGC	4 cut(s)	240, 272, 1423, 1516
AcoI	YGGCCR	3 cut(s)	999, 1381, 1517
AcsI	RAATTY	3 cut(s)	33, 611, 1559
AfaI	GTAC	6 cut(s)	929, 1022, 1259, 1306, 1532, 1782
AfiI	CCNNNNNNNGG	5 cut(s)	605, 1379, 1471, 1563, 1674
AflII	CTTAAG	2 cut(s)	449, 518
AflIII	ACRYGT	1 cut(s)	1023
AgsI	TTSAA	8 cut(s)	39, 372, 386, 616, 648, 1225, 1727, 1768
AjnI	CCWGG	5 cut(s)	186, 663, 942, 1092, 1791
AluBI	AGCT	7 cut(s)	77, 308, 719, 733, 917, 971, 1071
AluI	AGCT	7 cut(s)	77, 308, 719, 733, 917, 971, 1071
Alw26I	GTCTC	2 cut(s)	665, 1749
Ama87I	CYCGRG	1 cut(s)	1534
AoxI	GGCC	6 cut(s)	132, 336, 999, 1165, 1381, 1517
ApeKI	GCWGC	7 cut(s)	96, 197, 467, 719, 768, 771, 923
ApoI	RAATTY	3 cut(s)	33, 611, 1559
ArsI	GACNNNNNNTTYG	2 cut(s)	1304, 1336
Asp700I	GAANNNNTTC	3 cut(s)	381, 458, 734
Asp718I	GGTACC	1 cut(s)	1304
AspA2I	CCTAGG	1 cut(s)	604
AspLEI	GCGC	1 cut(s)	215
AspS9I	GGNCC	5 cut(s)	514, 1037, 1047, 1166, 1652
AsuC2I	CCSGG	3 cut(s)	1042, 1656, 1737
AsuHPI	GGTGA	4 cut(s)	277, 923, 1078, 1337
AvaI	CYCGRG	1 cut(s)	1534
AvaII	GGWCC	4 cut(s)	514, 1037, 1047, 1652
AvrII	CCTAGG	1 cut(s)	604
BaeI	ACNNNNGTAYC	2 cut(s)	1764, 1797
BalI	TGGCCA	1 cut(s)	1001
BanI	GGYRCC	1 cut(s)	1304
BbsI	GAAGAC	2 cut(s)	374, 579
BbvI	GCAGC	7 cut(s)	108, 184, 454, 706, 780, 783, 910
BccI	CCATC	5 cut(s)	491, 608, 878, 1028, 1073
BceAI	ACGGC	3 cut(s)	119, 1396, 1504
BcgI	CGANNNNNNTGC	2 cut(s)	1253, 1287
BciT130I	CCWGG	5 cut(s)	188, 665, 944, 1094, 1793
BciVI	GTATCC	1 cut(s)	1685
BclI	TGATCA	1 cut(s)	1053
BcnI	CCSGG	3 cut(s)	1042, 1656, 1737
BcoDI	GTCTC	2 cut(s)	665, 1749
BfaI	CTAG	4 cut(s)	605, 1592, 1616, 1807
BfmI	CTRYAG	3 cut(s)	720, 1228, 1453
BfoI	RGCGCY	1 cut(s)	216
BfrI	CTTAAG	2 cut(s)	449, 518
BfuI	GTATCC	1 cut(s)	1685
BlnI	CCTAGG	1 cut(s)	604
Bme1390I	CCNGG	8 cut(s)	188, 665, 944, 1042, 1094, 1656, 1737, 1793
Bme18I	GGWCC	4 cut(s)	514, 1037, 1047, 1652
BmeT110I	CYCGRG	1 cut(s)	1534
BmgT120I	GGNCC	5 cut(s)	514, 1037, 1047, 1166, 1652
BmiI	GGNNCC	5 cut(s)	713, 1039, 1168, 1306, 1653
BmrFI	CCNGG	8 cut(s)	188, 665, 944, 1042, 1094, 1656, 1737, 1793
BmrI	ACTGGG	1 cut(s)	1478
BmsI	GCATC	3 cut(s)	531, 1092, 1186
BmuI	ACTGGG	1 cut(s)	1478
BpiI	GAAGAC	2 cut(s)	374, 579
Bpu10I	CCTNAGC	1 cut(s)	574
BpuMI	CCSGG	3 cut(s)	1042, 1656, 1737
Bsa29I	ATCGAT	1 cut(s)	258
BsaAI	YACGTR	1 cut(s)	1261
BsaI	GGTCTC	1 cut(s)	1749
BsaJI	CCNNGG	8 cut(s)	129, 547, 604, 943, 1040, 1092, 1520, 1792
BsaWI	WCCGGW	1 cut(s)	1301
BsaXI	ACNNNNNCTCC	2 cut(s)	48, 78
Bsc4I	CCNNNNNNNGG	5 cut(s)	605, 1379, 1471, 1563, 1674
Bse118I	RCCGGY	2 cut(s)	1163, 1583
Bse1I	ACTGG	6 cut(s)	331, 461, 651, 1201, 1438, 1484
Bse3DI	GCAATG	3 cut(s)	150, 358, 1149
BseBI	CCWGG	5 cut(s)	188, 665, 944, 1094, 1793
BseCI	ATCGAT	1 cut(s)	258
BseDI	CCNNGG	8 cut(s)	129, 547, 604, 943, 1040, 1092, 1520, 1792
BseGI	GGATG	5 cut(s)	42, 600, 673, 691, 1341
BseLI	CCNNNNNNNGG	5 cut(s)	605, 1379, 1471, 1563, 1674
BseMI	GCAATG	3 cut(s)	150, 358, 1149
BseNI	ACTGG	6 cut(s)	331, 461, 651, 1201, 1438, 1484
BseX3I	CGGCCG	1 cut(s)	1517
BseXI	GCAGC	7 cut(s)	108, 184, 454, 706, 780, 783, 910
BseYI	CCCAGC	2 cut(s)	715, 971
Bsh1285I	CGRYCG	1 cut(s)	1520
BshFI	GGCC	6 cut(s)	134, 338, 1001, 1167, 1383, 1519
BshNI	GGYRCC	1 cut(s)	1304
BshVI	ATCGAT	1 cut(s)	258
BsiEI	CGRYCG	1 cut(s)	1520
BsiHKCI	CYCGRG	1 cut(s)	1534
BsiSI	CCGG	6 cut(s)	1042, 1164, 1302, 1584, 1655, 1736
BslFI	GGGAC	3 cut(s)	1448, 1580, 1618
BslI	CCNNNNNNNGG	5 cut(s)	605, 1379, 1471, 1563, 1674
BsmAI	GTCTC	2 cut(s)	665, 1749
BsmBI	CGTCTC	1 cut(s)	665
BsmFI	GGGAC	3 cut(s)	1448, 1580, 1618
BsmI	GAATGC	1 cut(s)	179
BsnI	GGCC	6 cut(s)	134, 338, 1001, 1167, 1383, 1519
Bso31I	GGTCTC	1 cut(s)	1749
BsoBI	CYCGRG	1 cut(s)	1534
Bsp1407I	TGTACA	1 cut(s)	1020
Bsp143I	GATC	3 cut(s)	445, 1011, 1053
Bsp19I	CCATGG	1 cut(s)	547
BspACI	CCGC	4 cut(s)	240, 272, 1423, 1516
BspANI	GGCC	6 cut(s)	134, 338, 1001, 1167, 1383, 1519
BspDI	ATCGAT	1 cut(s)	258
BspLI	GGNNCC	5 cut(s)	713, 1039, 1168, 1306, 1653
BspMAI	CTGCAG	3 cut(s)	724, 1232, 1457
BspQI	GCTCTTC	1 cut(s)	1728
BspT107I	GGYRCC	1 cut(s)	1304
BspTI	CTTAAG	2 cut(s)	449, 518
BspTNI	GGTCTC	1 cut(s)	1749
BsrDI	GCAATG	3 cut(s)	150, 358, 1149
BsrFI	RCCGGY	2 cut(s)	1163, 1583
BsrGI	TGTACA	1 cut(s)	1020
BsrI	ACTGG	6 cut(s)	331, 461, 651, 1201, 1438, 1484
BssAI	RCCGGY	2 cut(s)	1163, 1583
BssECI	CCNNGG	8 cut(s)	129, 547, 604, 943, 1040, 1092, 1520, 1792
BssMI	GATC	3 cut(s)	445, 1011, 1053
BssT1I	CCWWGG	3 cut(s)	129, 547, 604
Bst2UI	CCWGG	5 cut(s)	188, 665, 944, 1094, 1793
Bst4CI	ACNGT	7 cut(s)	638, 997, 1292, 1309, 1339, 1543, 1626
Bst6I	CTCTTC	1 cut(s)	1728
BstAFI	CTTAAG	2 cut(s)	449, 518
BstAPI	GCANNNNNTGC	1 cut(s)	1640
BstAUI	TGTACA	1 cut(s)	1020
BstBAI	YACGTR	1 cut(s)	1261
BstC8I	GCNNGC	2 cut(s)	1165, 1266
BstDEI	CTNAG	1 cut(s)	574
BstDSI	CCRYGG	2 cut(s)	547, 1520
BstF5I	GGATG	5 cut(s)	42, 600, 673, 691, 1341
BstH2I	RGCGCY	1 cut(s)	216
BstHHI	GCGC	1 cut(s)	215
BstKTI	GATC	3 cut(s)	448, 1014, 1056
BstMAI	GTCTC	2 cut(s)	665, 1749
BstMBI	GATC	3 cut(s)	445, 1011, 1053
BstMCI	CGRYCG	1 cut(s)	1520
BstMWI	GCNNNNNNNGC	8 cut(s)	102, 140, 183, 197, 875, 923, 1597, 1640
BstNI	CCWGG	5 cut(s)	188, 665, 944, 1094, 1793
BstNSI	RCATGY	1 cut(s)	1027
BstSCI	CCNGG	8 cut(s)	186, 663, 942, 1040, 1092, 1654, 1735, 1791
BstSFI	CTRYAG	3 cut(s)	720, 1228, 1453
BstV1I	GCAGC	7 cut(s)	108, 184, 454, 706, 780, 783, 910
BstV2I	GAAGAC	2 cut(s)	374, 579
BstXI	CCANNNNNNTGG	3 cut(s)	908, 1438, 1587
BstZI	CGGCCG	1 cut(s)	1517
Bsu15I	ATCGAT	1 cut(s)	258
BsuI	GTATCC	1 cut(s)	1685
BsuRI	GGCC	6 cut(s)	134, 338, 1001, 1167, 1383, 1519
BsuTUI	ATCGAT	1 cut(s)	258
BtgI	CCRYGG	2 cut(s)	547, 1520
BtgZI	GCGATG	1 cut(s)	554
BtsCI	GGATG	5 cut(s)	42, 600, 673, 691, 1341
BtsI	GCAGTG	3 cut(s)	138, 1098, 1191
BtsIMutI	CAGTG	8 cut(s)	138, 324, 469, 1098, 1191, 1431, 1491, 1622
Cac8I	GCNNGC	2 cut(s)	1165, 1266
CfoI	GCGC	1 cut(s)	215
Cfr10I	RCCGGY	2 cut(s)	1163, 1583
Cfr13I	GGNCC	5 cut(s)	514, 1037, 1047, 1166, 1652
ClaI	ATCGAT	1 cut(s)	258
CseI	GACGC	2 cut(s)	203, 1247
Csp6I	GTAC	6 cut(s)	928, 1021, 1258, 1305, 1531, 1781
CviQI	GTAC	6 cut(s)	928, 1021, 1258, 1305, 1531, 1781
DdeI	CTNAG	1 cut(s)	574
DpnI	GATC	3 cut(s)	447, 1013, 1055
DpnII	GATC	3 cut(s)	445, 1011, 1053
DraI	TTTAAA	1 cut(s)	1800
EaeI	YGGCCR	3 cut(s)	999, 1381, 1517
EagI	CGGCCG	1 cut(s)	1517
Eam1104I	CTCTTC	1 cut(s)	1728
EarI	CTCTTC	1 cut(s)	1728
EclXI	CGGCCG	1 cut(s)	1517
Eco130I	CCWWGG	3 cut(s)	129, 547, 604
Eco31I	GGTCTC	1 cut(s)	1749
Eco32I	GATATC	1 cut(s)	474
Eco47I	GGWCC	4 cut(s)	514, 1037, 1047, 1652
Eco52I	CGGCCG	1 cut(s)	1517
Eco88I	CYCGRG	1 cut(s)	1534
EcoO109I	RGGNCCY	1 cut(s)	514
EcoRII	CCWGG	5 cut(s)	186, 663, 942, 1092, 1791
EcoRV	GATATC	1 cut(s)	474
EcoT14I	CCWWGG	3 cut(s)	129, 547, 604
EcoT22I	ATGCAT	2 cut(s)	179, 494
ErhI	CCWWGG	3 cut(s)	129, 547, 604
Esp3I	CGTCTC	1 cut(s)	665
FaqI	GGGAC	3 cut(s)	1448, 1580, 1618
FauI	CCCGC	1 cut(s)	1416
FbaI	TGATCA	1 cut(s)	1053
FokI	GGATG	5 cut(s)	29, 587, 680, 698, 1328
FspBI	CTAG	4 cut(s)	605, 1592, 1616, 1807
GlaI	GCGC	1 cut(s)	214
GsaI	CCCAGC	2 cut(s)	719, 975
HaeII	RGCGCY	1 cut(s)	216
HaeIII	GGCC	6 cut(s)	134, 338, 1001, 1167, 1383, 1519
HapII	CCGG	6 cut(s)	1042, 1164, 1302, 1584, 1655, 1736
HgaI	GACGC	2 cut(s)	203, 1247
HhaI	GCGC	1 cut(s)	215
Hin6I	GCGC	1 cut(s)	213
HinP1I	GCGC	1 cut(s)	213
HincII	GTYRAC	1 cut(s)	1312
HindII	GTYRAC	1 cut(s)	1312
HindIII	AAGCTT	1 cut(s)	1069
HpaII	CCGG	6 cut(s)	1042, 1164, 1302, 1584, 1655, 1736
HphI	GGTGA	4 cut(s)	277, 923, 1078, 1337
Hpy166II	GTNNAC	7 cut(s)	152, 554, 893, 1021, 1312, 1355, 1781
Hpy188I	TCNGA	6 cut(s)	236, 1011, 1155, 1196, 1207, 1558
Hpy188III	TCNNGA	5 cut(s)	482, 1345, 1447, 1495, 1536
Hpy8I	GTNNAC	7 cut(s)	152, 554, 893, 1021, 1312, 1355, 1781
Hpy99I	CGWCG	3 cut(s)	124, 660, 830
HpyAV	CCTTC	4 cut(s)	4, 349, 1228, 1668
HpyCH4III	ACNGT	7 cut(s)	638, 997, 1292, 1309, 1339, 1543, 1626
HpyCH4IV	ACGT	1 cut(s)	1260
HpyF10VI	GCNNNNNNNGC	8 cut(s)	102, 140, 183, 197, 875, 923, 1597, 1640
HpyF3I	CTNAG	1 cut(s)	574
HpySE526I	ACGT	1 cut(s)	1260
HspAI	GCGC	1 cut(s)	213
KpnI	GGTACC	1 cut(s)	1308
KroI	GCCGGC	1 cut(s)	1163
KroNI	GCCGGC	1 cut(s)	1165
Ksp22I	TGATCA	1 cut(s)	1053
Kzo9I	GATC	3 cut(s)	445, 1011, 1053
LguI	GCTCTTC	1 cut(s)	1728
LmnI	GCTCC	3 cut(s)	56, 549, 601
Lsp1109I	GCAGC	7 cut(s)	108, 184, 454, 706, 780, 783, 910
LweI	GCATC	3 cut(s)	531, 1092, 1186
MaeI	CTAG	4 cut(s)	605, 1592, 1616, 1807
MaeII	ACGT	1 cut(s)	1260
MaeIII	GTNAC	6 cut(s)	136, 856, 991, 1325, 1396, 1663
MalI	GATC	3 cut(s)	447, 1013, 1055
MboI	GATC	3 cut(s)	445, 1011, 1053
MboII	GAAGA	9 cut(s)	182, 360, 374, 579, 960, 1213, 1422, 1537, 1715
MfeI	CAATTG	2 cut(s)	579, 906
MlsI	TGGCCA	1 cut(s)	1001
MluCI	AATT	9 cut(s)	33, 319, 579, 611, 906, 1277, 1559, 1727, 1741
MluNI	TGGCCA	1 cut(s)	1001
MlyI	GAGTC	3 cut(s)	1206, 1322, 1562
MmeI	TCCRAC	4 cut(s)	34, 342, 1185, 1600
MnlI	CCTC	7 cut(s)	337, 433, 505, 529, 1038, 1359, 1711
Mox20I	TGGCCA	1 cut(s)	1001
Mph1103I	ATGCAT	2 cut(s)	179, 494
MroNI	GCCGGC	1 cut(s)	1163
MroXI	GAANNNNTTC	3 cut(s)	381, 458, 734
MscI	TGGCCA	1 cut(s)	1001
MseI	TTAA	4 cut(s)	180, 450, 519, 1799
MslI	CAYNNNNRTG	3 cut(s)	47, 143, 1115
Msp20I	TGGCCA	1 cut(s)	1001
MspA1I	CMGCKG	1 cut(s)	719
MspCI	CTTAAG	2 cut(s)	449, 518
MspI	CCGG	6 cut(s)	1042, 1164, 1302, 1584, 1655, 1736
MspR9I	CCNGG	8 cut(s)	188, 665, 944, 1042, 1094, 1656, 1737, 1793
MunI	CAATTG	2 cut(s)	579, 906
Mva1269I	GAATGC	1 cut(s)	179
MvaI	CCWGG	5 cut(s)	188, 665, 944, 1094, 1793
MwoI	GCNNNNNNNGC	8 cut(s)	102, 140, 183, 197, 875, 923, 1597, 1640
NaeI	GCCGGC	1 cut(s)	1165
NciI	CCSGG	3 cut(s)	1042, 1656, 1737
NcoI	CCATGG	1 cut(s)	547
NdeII	GATC	3 cut(s)	445, 1011, 1053
NgoMIV	GCCGGC	1 cut(s)	1163
NlaIV	GGNNCC	5 cut(s)	713, 1039, 1168, 1306, 1653
NmuCI	GTSAC	3 cut(s)	136, 1325, 1396
NsiI	ATGCAT	2 cut(s)	179, 494
NspI	RCATGY	1 cut(s)	1027
PaeR7I	CTCGAG	1 cut(s)	1534
PciI	ACATGT	1 cut(s)	1023
PciSI	GCTCTTC	1 cut(s)	1728
PcsI	WCGNNNNNNNCGW	1 cut(s)	825
PctI	GAATGC	1 cut(s)	179
PdiI	GCCGGC	1 cut(s)	1165
PdmI	GAANNNNTTC	3 cut(s)	381, 458, 734
PfeI	GAWTC	8 cut(s)	205, 365, 485, 502, 939, 1006, 1491, 1498
PfoI	TCCNGGA	1 cut(s)	663
PleI	GAGTC	3 cut(s)	1205, 1322, 1561
PpsI	GAGTC	3 cut(s)	1205, 1322, 1561
Ppu21I	YACGTR	1 cut(s)	1261
PpuMI	RGGWCCY	1 cut(s)	514
PscI	ACATGT	1 cut(s)	1023
Psp5II	RGGWCCY	1 cut(s)	514
Psp6I	CCWGG	5 cut(s)	186, 663, 942, 1092, 1791
PspFI	CCCAGC	2 cut(s)	715, 971
PspGI	CCWGG	5 cut(s)	186, 663, 942, 1092, 1791
PspN4I	GGNNCC	5 cut(s)	713, 1039, 1168, 1306, 1653
PspPI	GGNCC	5 cut(s)	514, 1037, 1047, 1166, 1652
PspPPI	RGGWCCY	1 cut(s)	514
PstI	CTGCAG	3 cut(s)	724, 1232, 1457
PvuII	CAGCTG	1 cut(s)	719
RsaI	GTAC	6 cut(s)	929, 1022, 1259, 1306, 1532, 1782
RsaNI	GTAC	6 cut(s)	928, 1021, 1258, 1305, 1531, 1781
RseI	CAYNNNNRTG	3 cut(s)	47, 143, 1115
SapI	GCTCTTC	1 cut(s)	1728
SaqAI	TTAA	4 cut(s)	180, 450, 519, 1799
Sau3AI	GATC	3 cut(s)	445, 1011, 1053
Sau96I	GGNCC	5 cut(s)	514, 1037, 1047, 1166, 1652
SchI	GAGTC	3 cut(s)	1206, 1322, 1562
ScrFI	CCNGG	8 cut(s)	188, 665, 944, 1042, 1094, 1656, 1737, 1793
SfaNI	GCATC	3 cut(s)	531, 1092, 1186
SfcI	CTRYAG	3 cut(s)	720, 1228, 1453
Sfr274I	CTCGAG	1 cut(s)	1534
SinI	GGWCC	4 cut(s)	514, 1037, 1047, 1652
SlaI	CTCGAG	1 cut(s)	1534
SmiMI	CAYNNNNRTG	3 cut(s)	47, 143, 1115
SmlI	CTYRAG	3 cut(s)	449, 518, 1534
SmoI	CTYRAG	3 cut(s)	449, 518, 1534
Sse9I	AATT	9 cut(s)	33, 319, 579, 611, 906, 1277, 1559, 1727, 1741
SsiI	CCGC	4 cut(s)	240, 272, 1423, 1516
SspI	AATATT	1 cut(s)	389
SspMI	CTAG	4 cut(s)	605, 1592, 1616, 1807
StyD4I	CCNGG	8 cut(s)	186, 663, 942, 1040, 1092, 1654, 1735, 1791
StyI	CCWWGG	3 cut(s)	129, 547, 604
TaaI	ACNGT	7 cut(s)	638, 997, 1292, 1309, 1339, 1543, 1626
TaiI	ACGT	1 cut(s)	1263
TaqI	TCGA	5 cut(s)	119, 258, 342, 375, 1535
TasI	AATT	9 cut(s)	33, 319, 579, 611, 906, 1277, 1559, 1727, 1741
TatI	WGTACW	2 cut(s)	1020, 1530
TauI	GCSGC	3 cut(s)	242, 275, 1519
TfiI	GAWTC	8 cut(s)	205, 365, 485, 502, 939, 1006, 1491, 1498
Tru1I	TTAA	4 cut(s)	180, 450, 519, 1799
Tru9I	TTAA	4 cut(s)	180, 450, 519, 1799
TscAI	CASTG	8 cut(s)	145, 331, 469, 1105, 1191, 1438, 1491, 1629
TseFI	GTSAC	3 cut(s)	136, 1325, 1396
TseI	GCWGC	7 cut(s)	96, 197, 467, 719, 768, 771, 923
Tsp45I	GTSAC	3 cut(s)	136, 1325, 1396
TspDTI	ATGAA	8 cut(s)	443, 545, 641, 702, 1099, 1120, 1306, 1391
TspGWI	ACGGA	2 cut(s)	698, 1721
TspRI	CASTG	8 cut(s)	145, 331, 469, 1105, 1191, 1438, 1491, 1629
Vha464I	CTTAAG	2 cut(s)	449, 518
VpaK11BI	GGWCC	4 cut(s)	514, 1037, 1047, 1652
XapI	RAATTY	3 cut(s)	33, 611, 1559
XceI	RCATGY	1 cut(s)	1027
XcmI	CCANNNNNNNNNTGG	2 cut(s)	331, 871
XhoI	CTCGAG	1 cut(s)	1534
XmaJI	CCTAGG	1 cut(s)	604
XmnI	GAANNNNTTC	3 cut(s)	381, 458, 734
XspI	CTAG	4 cut(s)	605, 1592, 1616, 1807
Zsp2I	ATGCAT	2 cut(s)	179, 494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.