Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0003768

Physical Location & Seq

Genomic Coordinates Forward (+)

51031149 .. 51033049

Gene Structure 1901 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00369150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGAAAAGAAAGGAAAGGCAATAGTAGGTGGAATTTCAATCATCCTTGTGGTTGGAGCAGTAGTTGGTTGTGTAGCTGTTGTTTCACATAATCGCAGCAAAGGCAAGGATAGGCTTTCGACGAGTTCCAAGGCCGTCACTGCAATGTGTGAACCAACTGATTACAAGGAAGAATGCATTAACAGCCTGGCTGACGCTGCCAAGAATCAAAGCGCCACCCCAAAAGAACTTATCCGAGCCGCCATTGATTACACAATTGACAAGGTGAAAGCAGCAATAGAGAAATCAGATAGCATTATCAAAGAAGCTAAAAATGTCAATTCCACTGGAAAAATGGCCTTCGAGGATTGCAAAGACTTGTTGGAATCTTCAATCGAAAGTCTTCAATATTCGCTTTTGACACTCATTGATACTGAAATGCAAAACATGAATAATAAAGAGGCTGATCTTAAGAACTGGTTCAGTGCTGCGATATCATTTCAGGAATCATGCATTGATGGGATTACATACGAAGACCTTAAGAACCAAATGAATGAGGCGATGCTCCATGCTTCACAACTGACCAGCAACGCCTTAGCAATTGTGTCTTCCCTTGCTCCCATCCTAGGCAAATTCAATATCTCCATGAAAACTGACAGTAAAAGTTCAACCAGTCGTCGTCTCCTGGATGTAGAAATGGAAACGGATGAACATGGCACTTTTCCAGCATGGTTCCCAGCTGCAGATAGGAAGCTATTCGCACTCCACAACAAGAACAATAACAATAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACAACGACAACGACAACAACAACAACAACAACGGGAGAGTTACACCCAACGCAGTAGTGGCAAAAGATGGGAGTGGACAATACAAAACAATTGGTGAAGCTCTTGCTGCGTACCCAAAGGGATTCCAGGGAAGATATGTTATATATGTGAAAGCTGGGATTTACAATGAGTATGTTACTGTGGCCAAGAATCAGATCAATGTGTACATGTATGGAGATGGACCCCGGAGGACCATGATCACAGGCAGTAAAAGCTTTGCTGATGGCATCACCACCCAGGACACTGCCACATTCATCGTAATGGGGCATGGGTTCATTGGTAGAGCAATGGGATTTCAGAACACAGCCGGCCCCGAAAAGCATCAGGCAGTGGCACTCCGAGTCCAGTCGGAAATGTCAGCCTTCTTCAACTGCAGAATGGACGCCTACCAAGACACATTGTACGTGCAAGCATATCGCCAATTTTATCGCAACTGTGTCATATCCGGTACCGTTGACTTCATTTTTGGTGACTCATCAACAGTCATCCAGAATAGTTTACTCATTGTGAGGAAGCCTATGAACGGCCAAAAGAACATTGTGACTGCCCATGGAAGAAAAGATAAGCGGGAAACCACTGGTCTGGTCATCCAGAACTGCAGGATAGTCCCAGAACAGGCTTTGTTCCCAATGAGATTCCAGATTCAGTCATACTTGGGGCGGCCGTGGAAGATGTACTCGAGAACAGTTATCATGGAGTCCGAATTTGGGGACTTTATCCAACCAGCCGGTTGGCTAGAATGGGAAGGGACTTTTGGACTAGACACACTGTATTATGCAGAGTATGCAAATCGGGGTCCGGGTGCTGTAACCACAGGAAGGGTAAAATGGAAAGGATACCATGTGATTACGGACAGAAATGAGGCTCTTCAATTCACTCCGGGTAATTTTCTAACAGGAGACCAATGGTTGAAAGACACGGGTGTACCTTACTTCCTGGGTTTAAAAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0008150 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

597

Amino Acids

66.22

Weight (kDa)

8.21

Isoelectric Point (pI)

29.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	45 - 194	1.4e-29	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	284 - 581	9.9e-136	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003768)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47030 AT2G47040 AT2G47050 AT3G62170 AT3G62180 AT3G62180
fragaria_vesca	FvH4_1g26360 FvH4_4g21500
malus_domestica	MD16G1136400.v1.1 MD17G1283800.v1.1
prunus_persica	Prupe.1G105400_v2.0.a1 Prupe.3G003700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0486131 RchiOBHm_Chr4g0427511
rosa_laevigata	RLG00000007232 RLG00000023101
rosa_multiflora	Rmu_sc0001006.1_g000002 Rmu_sc0009627.1_g000001 Rmu_sc0017895.1_g000001 Rmu_sc0017895.1_g000002
rosa_roxburghii	Rroxscaffold_5G00369150 Rroxscaffold_6G00396030
rosa_rugosa	Rorug03G0223700 Rorug04G0218200
rosa_samantha	Rh3AG273500 Rh3BG308600 Rh3CG307100 Rh3DG303400 Rh4AG274700 Rh4BG280500 Rh4CG295800 Rh4DG277900
rosa_wichuraiana	Rw3G024240 Rw4G023810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1289
AccB1I	GGYRCC	1 cut(s)	1289
AciI	CCGC	3 cut(s)	240, 1408, 1501
AcoI	YGGCCR	3 cut(s)	984, 1366, 1502
AcsI	RAATTY	3 cut(s)	33, 611, 1544
AcyI	GRCGYC	1 cut(s)	1224
AfaI	GTAC	6 cut(s)	914, 1007, 1244, 1291, 1517, 1767
AfiI	CCNNNNNNNGG	5 cut(s)	605, 1364, 1456, 1548, 1659
AflII	CTTAAG	2 cut(s)	449, 518
AflIII	ACRYGT	1 cut(s)	1008
AgsI	TTSAA	8 cut(s)	39, 372, 386, 616, 648, 1210, 1712, 1753
AjnI	CCWGG	5 cut(s)	186, 663, 927, 1077, 1776
AjuI	GAANNNNNNNTTGG	2 cut(s)	1578, 1610
AluBI	AGCT	7 cut(s)	77, 308, 719, 733, 902, 956, 1056
AluI	AGCT	7 cut(s)	77, 308, 719, 733, 902, 956, 1056
Alw26I	GTCTC	2 cut(s)	665, 1734
Ama87I	CYCGRG	1 cut(s)	1519
AoxI	GGCC	6 cut(s)	132, 336, 984, 1150, 1366, 1502
ApeKI	GCWGC	9 cut(s)	96, 197, 272, 467, 719, 768, 771, 774, 908
ApoI	RAATTY	3 cut(s)	33, 611, 1544
ArsI	GACNNNNNNTTYG	2 cut(s)	1289, 1321
Asp700I	GAANNNNTTC	3 cut(s)	381, 458, 734
Asp718I	GGTACC	1 cut(s)	1289
AspA2I	CCTAGG	1 cut(s)	604
AspLEI	GCGC	1 cut(s)	215
AspS9I	GGNCC	4 cut(s)	1022, 1032, 1151, 1637
AsuC2I	CCSGG	3 cut(s)	1027, 1641, 1722
AsuHPI	GGTGA	4 cut(s)	277, 908, 1063, 1322
AvaI	CYCGRG	1 cut(s)	1519
AvaII	GGWCC	3 cut(s)	1022, 1032, 1637
AvrII	CCTAGG	1 cut(s)	604
BaeI	ACNNNNGTAYC	2 cut(s)	1749, 1782
BalI	TGGCCA	1 cut(s)	986
BanI	GGYRCC	1 cut(s)	1289
BbsI	GAAGAC	3 cut(s)	374, 519, 579
BbvI	GCAGC	9 cut(s)	108, 184, 284, 454, 706, 780, 783, 786, 895
BccI	CCATC	5 cut(s)	491, 608, 863, 1013, 1058
BceAI	ACGGC	3 cut(s)	119, 1381, 1489
BcgI	CGANNNNNNTGC	2 cut(s)	1238, 1272
BciT130I	CCWGG	5 cut(s)	188, 665, 929, 1079, 1778
BciVI	GTATCC	1 cut(s)	1670
BclI	TGATCA	1 cut(s)	1038
BcnI	CCSGG	3 cut(s)	1027, 1641, 1722
BcoDI	GTCTC	2 cut(s)	665, 1734
BfaI	CTAG	4 cut(s)	605, 1577, 1601, 1792
BfmI	CTRYAG	3 cut(s)	720, 1213, 1438
BfoI	RGCGCY	1 cut(s)	216
BfrI	CTTAAG	2 cut(s)	449, 518
BfuI	GTATCC	1 cut(s)	1670
BlnI	CCTAGG	1 cut(s)	604
Bme1390I	CCNGG	8 cut(s)	188, 665, 929, 1027, 1079, 1641, 1722, 1778
Bme18I	GGWCC	3 cut(s)	1022, 1032, 1637
BmeT110I	CYCGRG	1 cut(s)	1519
BmgT120I	GGNCC	4 cut(s)	1022, 1032, 1151, 1637
BmiI	GGNNCC	5 cut(s)	713, 1024, 1153, 1291, 1638
BmrFI	CCNGG	8 cut(s)	188, 665, 929, 1027, 1079, 1641, 1722, 1778
BmsI	GCATC	3 cut(s)	531, 1077, 1171
BpiI	GAAGAC	3 cut(s)	374, 519, 579
Bpu10I	CCTNAGC	1 cut(s)	574
BpuMI	CCSGG	3 cut(s)	1027, 1641, 1722
BsaAI	YACGTR	1 cut(s)	1246
BsaHI	GRCGYC	1 cut(s)	1224
BsaI	GGTCTC	1 cut(s)	1734
BsaJI	CCNNGG	8 cut(s)	129, 604, 928, 1025, 1077, 1390, 1505, 1777
BsaWI	WCCGGW	1 cut(s)	1286
BsaXI	ACNNNNNCTCC	2 cut(s)	48, 78
Bsc4I	CCNNNNNNNGG	5 cut(s)	605, 1364, 1456, 1548, 1659
Bse118I	RCCGGY	2 cut(s)	1148, 1568
Bse1I	ACTGG	5 cut(s)	331, 461, 651, 1186, 1423
Bse3DI	GCAATG	2 cut(s)	150, 1134
BseBI	CCWGG	5 cut(s)	188, 665, 929, 1079, 1778
BseDI	CCNNGG	8 cut(s)	129, 604, 928, 1025, 1077, 1390, 1505, 1777
BseGI	GGATG	6 cut(s)	42, 600, 673, 691, 1326, 1428
BseLI	CCNNNNNNNGG	5 cut(s)	605, 1364, 1456, 1548, 1659
BseMI	GCAATG	2 cut(s)	150, 1134
BseNI	ACTGG	5 cut(s)	331, 461, 651, 1186, 1423
BseX3I	CGGCCG	1 cut(s)	1502
BseXI	GCAGC	9 cut(s)	108, 184, 284, 454, 706, 780, 783, 786, 895
BseYI	CCCAGC	2 cut(s)	715, 956
Bsh1285I	CGRYCG	1 cut(s)	1505
BshFI	GGCC	6 cut(s)	134, 338, 986, 1152, 1368, 1504
BshNI	GGYRCC	1 cut(s)	1289
BsiEI	CGRYCG	1 cut(s)	1505
BsiHKCI	CYCGRG	1 cut(s)	1519
BsiSI	CCGG	6 cut(s)	1027, 1149, 1287, 1569, 1640, 1721
BslFI	GGGAC	3 cut(s)	1433, 1565, 1603
BslI	CCNNNNNNNGG	5 cut(s)	605, 1364, 1456, 1548, 1659
BsmAI	GTCTC	2 cut(s)	665, 1734
BsmBI	CGTCTC	1 cut(s)	665
BsmFI	GGGAC	3 cut(s)	1433, 1565, 1603
BsmI	GAATGC	1 cut(s)	179
BsnI	GGCC	6 cut(s)	134, 338, 986, 1152, 1368, 1504
Bso31I	GGTCTC	1 cut(s)	1734
BsoBI	CYCGRG	1 cut(s)	1519
Bsp1407I	TGTACA	1 cut(s)	1005
Bsp143I	GATC	3 cut(s)	445, 996, 1038
Bsp19I	CCATGG	1 cut(s)	1390
BspACI	CCGC	3 cut(s)	240, 1408, 1501
BspANI	GGCC	6 cut(s)	134, 338, 986, 1152, 1368, 1504
BspLI	GGNNCC	5 cut(s)	713, 1024, 1153, 1291, 1638
BspMAI	CTGCAG	3 cut(s)	724, 1217, 1442
BspQI	GCTCTTC	1 cut(s)	1713
BspT107I	GGYRCC	1 cut(s)	1289
BspTI	CTTAAG	2 cut(s)	449, 518
BspTNI	GGTCTC	1 cut(s)	1734
BsrDI	GCAATG	2 cut(s)	150, 1134
BsrFI	RCCGGY	2 cut(s)	1148, 1568
BsrGI	TGTACA	1 cut(s)	1005
BsrI	ACTGG	5 cut(s)	331, 461, 651, 1186, 1423
BssAI	RCCGGY	2 cut(s)	1148, 1568
BssECI	CCNNGG	8 cut(s)	129, 604, 928, 1025, 1077, 1390, 1505, 1777
BssMI	GATC	3 cut(s)	445, 996, 1038
BssNI	GRCGYC	1 cut(s)	1224
BssT1I	CCWWGG	3 cut(s)	129, 604, 1390
Bst2UI	CCWGG	5 cut(s)	188, 665, 929, 1079, 1778
Bst4CI	ACNGT	7 cut(s)	638, 982, 1277, 1294, 1324, 1528, 1611
Bst6I	CTCTTC	1 cut(s)	1713
BstACI	GRCGYC	1 cut(s)	1224
BstAFI	CTTAAG	2 cut(s)	449, 518
BstAPI	GCANNNNNTGC	1 cut(s)	1625
BstAUI	TGTACA	1 cut(s)	1005
BstBAI	YACGTR	1 cut(s)	1246
BstC8I	GCNNGC	2 cut(s)	1150, 1251
BstDEI	CTNAG	1 cut(s)	574
BstDSI	CCRYGG	2 cut(s)	1390, 1505
BstF5I	GGATG	6 cut(s)	42, 600, 673, 691, 1326, 1428
BstH2I	RGCGCY	1 cut(s)	216
BstHHI	GCGC	1 cut(s)	215
BstKTI	GATC	3 cut(s)	448, 999, 1041
BstMAI	GTCTC	2 cut(s)	665, 1734
BstMBI	GATC	3 cut(s)	445, 996, 1038
BstMCI	CGRYCG	1 cut(s)	1505
BstMWI	GCNNNNNNNGC	9 cut(s)	102, 140, 183, 197, 774, 860, 908, 1053, 1625
BstNI	CCWGG	5 cut(s)	188, 665, 929, 1079, 1778
BstNSI	RCATGY	1 cut(s)	1012
BstSCI	CCNGG	8 cut(s)	186, 663, 927, 1025, 1077, 1639, 1720, 1776
BstSFI	CTRYAG	3 cut(s)	720, 1213, 1438
BstV1I	GCAGC	9 cut(s)	108, 184, 284, 454, 706, 780, 783, 786, 895
BstV2I	GAAGAC	3 cut(s)	374, 519, 579
BstXI	CCANNNNNNTGG	2 cut(s)	1423, 1572
BstZI	CGGCCG	1 cut(s)	1502
BsuI	GTATCC	1 cut(s)	1670
BsuRI	GGCC	6 cut(s)	134, 338, 986, 1152, 1368, 1504
BtgI	CCRYGG	2 cut(s)	1390, 1505
BtgZI	GCGATG	1 cut(s)	554
BtsCI	GGATG	6 cut(s)	42, 600, 673, 691, 1326, 1428
BtsI	GCAGTG	3 cut(s)	138, 1083, 1176
BtsIMutI	CAGTG	7 cut(s)	138, 324, 469, 1083, 1176, 1416, 1607
Cac8I	GCNNGC	2 cut(s)	1150, 1251
CfoI	GCGC	1 cut(s)	215
Cfr10I	RCCGGY	2 cut(s)	1148, 1568
Cfr13I	GGNCC	4 cut(s)	1022, 1032, 1151, 1637
CseI	GACGC	2 cut(s)	203, 1232
Csp6I	GTAC	6 cut(s)	913, 1006, 1243, 1290, 1516, 1766
CviQI	GTAC	6 cut(s)	913, 1006, 1243, 1290, 1516, 1766
DdeI	CTNAG	1 cut(s)	574
DpnI	GATC	3 cut(s)	447, 998, 1040
DpnII	GATC	3 cut(s)	445, 996, 1038
DraI	TTTAAA	1 cut(s)	1785
EaeI	YGGCCR	3 cut(s)	984, 1366, 1502
EagI	CGGCCG	1 cut(s)	1502
Eam1104I	CTCTTC	1 cut(s)	1713
EarI	CTCTTC	1 cut(s)	1713
EclXI	CGGCCG	1 cut(s)	1502
Eco130I	CCWWGG	3 cut(s)	129, 604, 1390
Eco31I	GGTCTC	1 cut(s)	1734
Eco32I	GATATC	1 cut(s)	474
Eco47I	GGWCC	3 cut(s)	1022, 1032, 1637
Eco52I	CGGCCG	1 cut(s)	1502
Eco88I	CYCGRG	1 cut(s)	1519
EcoRII	CCWGG	5 cut(s)	186, 663, 927, 1077, 1776
EcoRV	GATATC	1 cut(s)	474
EcoT14I	CCWWGG	3 cut(s)	129, 604, 1390
EcoT22I	ATGCAT	2 cut(s)	179, 494
ErhI	CCWWGG	3 cut(s)	129, 604, 1390
Esp3I	CGTCTC	1 cut(s)	665
FaqI	GGGAC	3 cut(s)	1433, 1565, 1603
FauI	CCCGC	1 cut(s)	1401
FbaI	TGATCA	1 cut(s)	1038
FokI	GGATG	6 cut(s)	29, 587, 680, 698, 1313, 1415
FspBI	CTAG	4 cut(s)	605, 1577, 1601, 1792
GlaI	GCGC	1 cut(s)	214
GsaI	CCCAGC	2 cut(s)	719, 960
HaeII	RGCGCY	1 cut(s)	216
HaeIII	GGCC	6 cut(s)	134, 338, 986, 1152, 1368, 1504
HapII	CCGG	6 cut(s)	1027, 1149, 1287, 1569, 1640, 1721
HgaI	GACGC	2 cut(s)	203, 1232
HhaI	GCGC	1 cut(s)	215
Hin1I	GRCGYC	1 cut(s)	1224
Hin6I	GCGC	1 cut(s)	213
HinP1I	GCGC	1 cut(s)	213
HincII	GTYRAC	1 cut(s)	1297
HindII	GTYRAC	1 cut(s)	1297
HindIII	AAGCTT	1 cut(s)	1054
HpaII	CCGG	6 cut(s)	1027, 1149, 1287, 1569, 1640, 1721
HphI	GGTGA	4 cut(s)	277, 908, 1063, 1322
Hpy166II	GTNNAC	6 cut(s)	152, 878, 1006, 1297, 1340, 1766
Hpy188I	TCNGA	7 cut(s)	236, 289, 996, 1140, 1181, 1192, 1543
Hpy188III	TCNNGA	5 cut(s)	482, 1330, 1432, 1480, 1521
Hpy8I	GTNNAC	6 cut(s)	152, 878, 1006, 1297, 1340, 1766
Hpy99I	CGWCG	2 cut(s)	124, 660
HpyAV	CCTTC	4 cut(s)	349, 1213, 1580, 1653
HpyCH4III	ACNGT	7 cut(s)	638, 982, 1277, 1294, 1324, 1528, 1611
HpyCH4IV	ACGT	1 cut(s)	1245
HpyF10VI	GCNNNNNNNGC	9 cut(s)	102, 140, 183, 197, 774, 860, 908, 1053, 1625
HpyF3I	CTNAG	1 cut(s)	574
HpySE526I	ACGT	1 cut(s)	1245
Hsp92I	GRCGYC	1 cut(s)	1224
HspAI	GCGC	1 cut(s)	213
KpnI	GGTACC	1 cut(s)	1293
KroI	GCCGGC	1 cut(s)	1148
KroNI	GCCGGC	1 cut(s)	1150
Ksp22I	TGATCA	1 cut(s)	1038
Kzo9I	GATC	3 cut(s)	445, 996, 1038
LguI	GCTCTTC	1 cut(s)	1713
LmnI	GCTCC	3 cut(s)	56, 549, 601
Lsp1109I	GCAGC	9 cut(s)	108, 184, 284, 454, 706, 780, 783, 786, 895
LweI	GCATC	3 cut(s)	531, 1077, 1171
MaeI	CTAG	4 cut(s)	605, 1577, 1601, 1792
MaeII	ACGT	1 cut(s)	1245
MaeIII	GTNAC	6 cut(s)	136, 841, 976, 1310, 1381, 1648
MalI	GATC	3 cut(s)	447, 998, 1040
MboI	GATC	3 cut(s)	445, 996, 1038
MfeI	CAATTG	3 cut(s)	255, 579, 891
MlsI	TGGCCA	1 cut(s)	986
MluNI	TGGCCA	1 cut(s)	986
MlyI	GAGTC	3 cut(s)	1191, 1307, 1547
MmeI	TCCRAC	4 cut(s)	34, 342, 1170, 1585
MnlI	CCTC	6 cut(s)	337, 433, 529, 1023, 1344, 1696
Mox20I	TGGCCA	1 cut(s)	986
Mph1103I	ATGCAT	2 cut(s)	179, 494
MroNI	GCCGGC	1 cut(s)	1148
MroXI	GAANNNNTTC	3 cut(s)	381, 458, 734
MscI	TGGCCA	1 cut(s)	986
MseI	TTAA	4 cut(s)	180, 450, 519, 1784
MslI	CAYNNNNRTG	3 cut(s)	47, 143, 1100
Msp20I	TGGCCA	1 cut(s)	986
MspA1I	CMGCKG	1 cut(s)	719
MspCI	CTTAAG	2 cut(s)	449, 518
MspI	CCGG	6 cut(s)	1027, 1149, 1287, 1569, 1640, 1721
MspR9I	CCNGG	8 cut(s)	188, 665, 929, 1027, 1079, 1641, 1722, 1778
MunI	CAATTG	3 cut(s)	255, 579, 891
Mva1269I	GAATGC	1 cut(s)	179
MvaI	CCWGG	5 cut(s)	188, 665, 929, 1079, 1778
MwoI	GCNNNNNNNGC	9 cut(s)	102, 140, 183, 197, 774, 860, 908, 1053, 1625
NaeI	GCCGGC	1 cut(s)	1150
NciI	CCSGG	3 cut(s)	1027, 1641, 1722
NcoI	CCATGG	1 cut(s)	1390
NdeII	GATC	3 cut(s)	445, 996, 1038
NgoMIV	GCCGGC	1 cut(s)	1148
NlaIV	GGNNCC	5 cut(s)	713, 1024, 1153, 1291, 1638
NmuCI	GTSAC	3 cut(s)	136, 1310, 1381
NsiI	ATGCAT	2 cut(s)	179, 494
NspI	RCATGY	1 cut(s)	1012
PaeR7I	CTCGAG	1 cut(s)	1519
PciI	ACATGT	1 cut(s)	1008
PciSI	GCTCTTC	1 cut(s)	1713
PctI	GAATGC	1 cut(s)	179
PdiI	GCCGGC	1 cut(s)	1150
PdmI	GAANNNNTTC	3 cut(s)	381, 458, 734
PfeI	GAWTC	7 cut(s)	205, 365, 485, 924, 991, 1476, 1483
PfoI	TCCNGGA	1 cut(s)	663
PleI	GAGTC	3 cut(s)	1190, 1307, 1546
PpsI	GAGTC	3 cut(s)	1190, 1307, 1546
Ppu21I	YACGTR	1 cut(s)	1246
PscI	ACATGT	1 cut(s)	1008
Psp6I	CCWGG	5 cut(s)	186, 663, 927, 1077, 1776
PspFI	CCCAGC	2 cut(s)	715, 956
PspGI	CCWGG	5 cut(s)	186, 663, 927, 1077, 1776
PspN4I	GGNNCC	5 cut(s)	713, 1024, 1153, 1291, 1638
PspPI	GGNCC	4 cut(s)	1022, 1032, 1151, 1637
PstI	CTGCAG	3 cut(s)	724, 1217, 1442
PvuII	CAGCTG	1 cut(s)	719
RsaI	GTAC	6 cut(s)	914, 1007, 1244, 1291, 1517, 1767
RsaNI	GTAC	6 cut(s)	913, 1006, 1243, 1290, 1516, 1766
RseI	CAYNNNNRTG	3 cut(s)	47, 143, 1100
SapI	GCTCTTC	1 cut(s)	1713
SaqAI	TTAA	4 cut(s)	180, 450, 519, 1784
Sau3AI	GATC	3 cut(s)	445, 996, 1038
Sau96I	GGNCC	4 cut(s)	1022, 1032, 1151, 1637
SchI	GAGTC	3 cut(s)	1191, 1307, 1547
ScrFI	CCNGG	8 cut(s)	188, 665, 929, 1027, 1079, 1641, 1722, 1778
SfaNI	GCATC	3 cut(s)	531, 1077, 1171
SfcI	CTRYAG	3 cut(s)	720, 1213, 1438
Sfr274I	CTCGAG	1 cut(s)	1519
SinI	GGWCC	3 cut(s)	1022, 1032, 1637
SlaI	CTCGAG	1 cut(s)	1519
SmiMI	CAYNNNNRTG	3 cut(s)	47, 143, 1100
SmlI	CTYRAG	3 cut(s)	449, 518, 1519
SmoI	CTYRAG	3 cut(s)	449, 518, 1519
SsiI	CCGC	3 cut(s)	240, 1408, 1501
SspI	AATATT	1 cut(s)	389
SspMI	CTAG	4 cut(s)	605, 1577, 1601, 1792
StyD4I	CCNGG	8 cut(s)	186, 663, 927, 1025, 1077, 1639, 1720, 1776
StyI	CCWWGG	3 cut(s)	129, 604, 1390
TaaI	ACNGT	7 cut(s)	638, 982, 1277, 1294, 1324, 1528, 1611
TaiI	ACGT	1 cut(s)	1248
TaqI	TCGA	4 cut(s)	119, 342, 375, 1520
TatI	WGTACW	2 cut(s)	1005, 1515
TauI	GCSGC	2 cut(s)	242, 1504
TfiI	GAWTC	7 cut(s)	205, 365, 485, 924, 991, 1476, 1483
Tru1I	TTAA	4 cut(s)	180, 450, 519, 1784
Tru9I	TTAA	4 cut(s)	180, 450, 519, 1784
TscAI	CASTG	7 cut(s)	145, 331, 469, 1090, 1176, 1423, 1614
TseFI	GTSAC	3 cut(s)	136, 1310, 1381
TseI	GCWGC	9 cut(s)	96, 197, 272, 467, 719, 768, 771, 774, 908
Tsp45I	GTSAC	3 cut(s)	136, 1310, 1381
TspDTI	ATGAA	8 cut(s)	443, 545, 641, 702, 1084, 1105, 1291, 1376
TspGWI	ACGGA	2 cut(s)	698, 1706
TspRI	CASTG	7 cut(s)	145, 331, 469, 1090, 1176, 1423, 1614
Vha464I	CTTAAG	2 cut(s)	449, 518
VpaK11BI	GGWCC	3 cut(s)	1022, 1032, 1637
XapI	RAATTY	3 cut(s)	33, 611, 1544
XceI	RCATGY	1 cut(s)	1012
XcmI	CCANNNNNNNNNTGG	2 cut(s)	331, 856
XhoI	CTCGAG	1 cut(s)	1519
XmaJI	CCTAGG	1 cut(s)	604
XmnI	GAANNNNTTC	3 cut(s)	381, 458, 734
XspI	CTAG	4 cut(s)	605, 1577, 1601, 1792
Zsp2I	ATGCAT	2 cut(s)	179, 494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.