Pectinesterase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47030 AT2G47040 AT2G47050 AT3G62170 AT3G62180 AT3G62180 |
| fragaria_vesca | FvH4_1g26360 FvH4_4g21500 |
| malus_domestica | MD16G1136400.v1.1 MD17G1283800.v1.1 |
| prunus_persica | Prupe.1G105400_v2.0.a1 Prupe.3G003700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0486131 RchiOBHm_Chr4g0427511 |
| rosa_laevigata | RLG00000007232 RLG00000023101 |
| rosa_multiflora | Rmu_sc0001006.1_g000002 Rmu_sc0009627.1_g000001 Rmu_sc0017895.1_g000001 Rmu_sc0017895.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00369150 Rroxscaffold_6G00396030 |
| rosa_rugosa | Rorug03G0223700 Rorug04G0218200 |
| rosa_samantha | Rh3AG273500 Rh3BG308600 Rh3CG307100 Rh3DG303400 Rh4AG274700 Rh4BG280500 Rh4CG295800 Rh4DG277900 |
| rosa_wichuraiana | Rw3G024240 Rw4G023810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 203 |
| AciI | CCGC | 1 cut(s) | 213 |
| AclWI | GGATC | 5 cut(s) | 181, 196, 287, 300, 313 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 200 |
| AgsI | TTSAA | 1 cut(s) | 305 |
| AjnI | CCWGG | 1 cut(s) | 224 |
| Alw26I | GTCTC | 1 cut(s) | 21 |
| AlwI | GGATC | 5 cut(s) | 181, 196, 287, 300, 313 |
| AoxI | GGCC | 1 cut(s) | 228 |
| AspS9I | GGNCC | 1 cut(s) | 228 |
| AsuHPI | GGTGA | 3 cut(s) | 16, 163, 214 |
| BaeGI | GKGCMC | 1 cut(s) | 208 |
| BamHI | GGATCC | 1 cut(s) | 292 |
| BanI | GGYRCC | 1 cut(s) | 203 |
| BbsI | GAAGAC | 1 cut(s) | 312 |
| BciT130I | CCWGG | 1 cut(s) | 226 |
| BcoDI | GTCTC | 1 cut(s) | 21 |
| BisI | GCNGC | 1 cut(s) | 214 |
| BlsI | GCNGC | 1 cut(s) | 215 |
| Bme1390I | CCNGG | 1 cut(s) | 226 |
| BmgT120I | GGNCC | 1 cut(s) | 228 |
| BmiI | GGNNCC | 3 cut(s) | 56, 205, 294 |
| BmrFI | CCNGG | 1 cut(s) | 226 |
| BmsI | GCATC | 1 cut(s) | 274 |
| BpiI | GAAGAC | 1 cut(s) | 312 |
| Bsa29I | ATCGAT | 1 cut(s) | 282 |
| BsaJI | CCNNGG | 3 cut(s) | 208, 225, 288 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 200 |
| BseBI | CCWGG | 1 cut(s) | 226 |
| BseCI | ATCGAT | 1 cut(s) | 282 |
| BseDI | CCNNGG | 3 cut(s) | 208, 225, 288 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 200 |
| BseSI | GKGCMC | 1 cut(s) | 208 |
| BshFI | GGCC | 1 cut(s) | 230 |
| BshNI | GGYRCC | 1 cut(s) | 203 |
| BshVI | ATCGAT | 1 cut(s) | 282 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 200 |
| BsmAI | GTCTC | 1 cut(s) | 21 |
| BsnI | GGCC | 1 cut(s) | 230 |
| Bsp1286I | GDGCHC | 1 cut(s) | 208 |
| Bsp143I | GATC | 6 cut(s) | 43, 173, 188, 235, 292, 318 |
| Bsp19I | CCATGG | 1 cut(s) | 208 |
| BspACI | CCGC | 1 cut(s) | 213 |
| BspANI | GGCC | 1 cut(s) | 230 |
| BspDI | ATCGAT | 1 cut(s) | 282 |
| BspLI | GGNNCC | 3 cut(s) | 56, 205, 294 |
| BspPI | GGATC | 5 cut(s) | 181, 196, 287, 300, 313 |
| BspT107I | GGYRCC | 1 cut(s) | 203 |
| BssECI | CCNNGG | 3 cut(s) | 208, 225, 288 |
| BssMI | GATC | 6 cut(s) | 43, 173, 188, 235, 292, 318 |
| BssT1I | CCWWGG | 2 cut(s) | 208, 288 |
| Bst2UI | CCWGG | 1 cut(s) | 226 |
| Bst4CI | ACNGT | 1 cut(s) | 313 |
| Bst6I | CTCTTC | 1 cut(s) | 113 |
| BstDSI | CCRYGG | 1 cut(s) | 208 |
| BstKTI | GATC | 6 cut(s) | 46, 176, 191, 238, 295, 321 |
| BstMAI | GTCTC | 1 cut(s) | 21 |
| BstMBI | GATC | 6 cut(s) | 43, 173, 188, 235, 292, 318 |
| BstNI | CCWGG | 1 cut(s) | 226 |
| BstSCI | CCNGG | 1 cut(s) | 224 |
| BstSLI | GKGCMC | 1 cut(s) | 208 |
| BstV2I | GAAGAC | 1 cut(s) | 312 |
| BstX2I | RGATCY | 2 cut(s) | 292, 318 |
| BstYI | RGATCY | 2 cut(s) | 292, 318 |
| Bsu15I | ATCGAT | 1 cut(s) | 282 |
| BsuRI | GGCC | 1 cut(s) | 230 |
| BsuTUI | ATCGAT | 1 cut(s) | 282 |
| BtgI | CCRYGG | 1 cut(s) | 208 |
| Cfr13I | GGNCC | 1 cut(s) | 228 |
| ClaI | ATCGAT | 1 cut(s) | 282 |
| CviAII | CATG | 3 cut(s) | 163, 181, 209 |
| CviJI | RGCY | 3 cut(s) | 230, 243, 254 |
| CviKI_1 | RGCY | 3 cut(s) | 230, 243, 254 |
| DpnI | GATC | 6 cut(s) | 45, 175, 190, 237, 294, 320 |
| DpnII | GATC | 6 cut(s) | 43, 173, 188, 235, 292, 318 |
| Eam1104I | CTCTTC | 1 cut(s) | 113 |
| EarI | CTCTTC | 1 cut(s) | 113 |
| Eco130I | CCWWGG | 2 cut(s) | 208, 288 |
| EcoRII | CCWGG | 1 cut(s) | 224 |
| EcoT14I | CCWWGG | 2 cut(s) | 208, 288 |
| ErhI | CCWWGG | 2 cut(s) | 208, 288 |
| FaeI | CATG | 3 cut(s) | 166, 184, 212 |
| FaiI | YATR | 4 cut(s) | 52, 164, 182, 210 |
| FatI | CATG | 3 cut(s) | 162, 180, 208 |
| Fnu4HI | GCNGC | 1 cut(s) | 214 |
| Fsp4HI | GCNGC | 1 cut(s) | 214 |
| GluI | GCNGC | 1 cut(s) | 214 |
| HaeIII | GGCC | 1 cut(s) | 230 |
| Hin1II | CATG | 3 cut(s) | 166, 184, 212 |
| HinfI | GANTC | 3 cut(s) | 62, 111, 121 |
| HphI | GGTGA | 3 cut(s) | 16, 163, 214 |
| Hpy166II | GTNNAC | 1 cut(s) | 222 |
| Hpy188I | TCNGA | 2 cut(s) | 270, 332 |
| Hpy188III | TCNNGA | 4 cut(s) | 41, 115, 171, 316 |
| Hpy8I | GTNNAC | 1 cut(s) | 222 |
| HpyAV | CCTTC | 2 cut(s) | 151, 265 |
| HpyCH4III | ACNGT | 1 cut(s) | 313 |
| Hsp92II | CATG | 3 cut(s) | 166, 184, 212 |
| Kzo9I | GATC | 6 cut(s) | 43, 173, 188, 235, 292, 318 |
| LpnPI | CCDG | 4 cut(s) | 156, 211, 224, 238 |
| LweI | GCATC | 1 cut(s) | 274 |
| MaeIII | GTNAC | 2 cut(s) | 67, 122 |
| MalI | GATC | 6 cut(s) | 45, 175, 190, 237, 294, 320 |
| MboI | GATC | 6 cut(s) | 43, 173, 188, 235, 292, 318 |
| MflI | RGATCY | 2 cut(s) | 292, 318 |
| MhlI | GDGCHC | 1 cut(s) | 208 |
| MluCI | AATT | 2 cut(s) | 21, 34 |
| MlyI | GAGTC | 1 cut(s) | 130 |
| MnlI | CCTC | 2 cut(s) | 136, 252 |
| MspR9I | CCNGG | 1 cut(s) | 226 |
| MvaI | CCWGG | 1 cut(s) | 226 |
| NcoI | CCATGG | 1 cut(s) | 208 |
| NdeII | GATC | 6 cut(s) | 43, 173, 188, 235, 292, 318 |
| NlaIII | CATG | 3 cut(s) | 166, 184, 212 |
| NlaIV | GGNNCC | 3 cut(s) | 56, 205, 294 |
| NmeAIII | GCCGAG | 1 cut(s) | 280 |
| NmuCI | GTSAC | 1 cut(s) | 122 |
| PfeI | GAWTC | 2 cut(s) | 62, 111 |
| PflFI | GACNNNGTC | 1 cut(s) | 311 |
| PkrI | GCNGC | 1 cut(s) | 215 |
| PleI | GAGTC | 1 cut(s) | 129 |
| PpsI | GAGTC | 1 cut(s) | 129 |
| Psp6I | CCWGG | 1 cut(s) | 224 |
| PspGI | CCWGG | 1 cut(s) | 224 |
| PspN4I | GGNNCC | 3 cut(s) | 56, 205, 294 |
| PspPI | GGNCC | 1 cut(s) | 228 |
| PsuI | RGATCY | 2 cut(s) | 292, 318 |
| PsyI | GACNNNGTC | 1 cut(s) | 311 |
| SatI | GCNGC | 1 cut(s) | 214 |
| Sau3AI | GATC | 6 cut(s) | 43, 173, 188, 235, 292, 318 |
| Sau96I | GGNCC | 1 cut(s) | 228 |
| SchI | GAGTC | 1 cut(s) | 130 |
| ScrFI | CCNGG | 1 cut(s) | 226 |
| SduI | GDGCHC | 1 cut(s) | 208 |
| SetI | ASST | 3 cut(s) | 153, 205, 227 |
| SfaNI | GCATC | 1 cut(s) | 274 |
| Sse9I | AATT | 2 cut(s) | 21, 34 |
| SsiI | CCGC | 1 cut(s) | 213 |
| StyD4I | CCNGG | 1 cut(s) | 224 |
| StyI | CCWWGG | 2 cut(s) | 208, 288 |
| TaaI | ACNGT | 1 cut(s) | 313 |
| TaqI | TCGA | 2 cut(s) | 282, 315 |
| TasI | AATT | 2 cut(s) | 21, 34 |
| TauI | GCSGC | 1 cut(s) | 216 |
| TfiI | GAWTC | 2 cut(s) | 62, 111 |
| TseFI | GTSAC | 1 cut(s) | 122 |
| Tsp45I | GTSAC | 1 cut(s) | 122 |
| TspDTI | ATGAA | 3 cut(s) | 113, 179, 197 |
| Tth111I | GACNNNGTC | 1 cut(s) | 311 |