AT4G01850

Catalyzes the formation of S-adenosylmethionine from methionine and ATP

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
795986 .. 798381
2396 bp
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UTR
Exon/CDS
Intron
AT4G01850.2

Sequence Viewer

Length: 1182 bp
ATGGAGACTTTCCTATTCACATCTGAGTCTGTGAACGAAGGACACCCTGACAAGCTTTGCGACCAGATCTCTGATGCAGTCCTTGATGCCTGCCTTGAGCAAGACCCTGATAGCAAAGTTGCTTGTGAGACATGCACCAAGACCAACATGGTCATGGTTTTCGGTGAGATCACCACCAAGGCTACGATTGACTACGAGAAGATTGTCCGTGACACTTGCCGTTCCATTGGATTCATCTCTGACGATGTTGGTCTTGATGCTGACAAATGCAAAGTCCTTGTTAACATTGAACAACAGAGCCCAGACATTGCTCAAGGTGTTCACGGTCACTTCACCAAACGTCCAGAAGACATTGGAGCTGGTGACCAAGGACACATGTTTGGTTATGCCACTGATGAAACCCCTGAGCTCATGCCTTTGAGTCATGTCCTTGCAACCAAGATTGGTGCTCGTCTCACTGAAGTCAGGAAGAATGGAACTTGCCGTTGGTTAAGACCAGATGGCAAGACCCAAGTCACTGTTGAGTACTACAATGACAATGGCGCTATGGTTCCAGTCCGTGTCCACACCGTCCTGATCTCAACCCAGCACGATGAAACCGTTACCAATGACGAGATTGCGCGTGACCTCAAGGAGCATGTGATCAAACCAATCATCCCAGAGAAATACCTTGACGACAAAACCATCTTCCACCTCAACCCATCAGGCCGGTTTGTGATCGGGGGACCACACGGTGATGCTGGTTTAACTGGACGTAAGATCATCATTGACACATACGGAGGATGGGGAGCTCATGGAGGTGGTGCTTTCTCAGGCAAAGACCCAACCAAAGTCGACAGAAGTGGAGCTTACATCGTGAGGCAAGCAGCAAAGAGTGTGGTGGCTAATGGCATGGCTCGCAGGGCTCTTGTCCAGGTCTCATACGCCATTGGAGTACCCGAGCCATTGTCTGTCTTCGTTGACACTTACGGAACAGGGTTGATTCCAGACAAGGAGATCCTGAAGATCGTGAAAGAGACATTCGATTTCAGACCAGGAATGATGACAATCAACTTGGACTTGAAGAGAGGAGGAAATGGAAGGTTTCAGAAAACGGCAGCGTATGGACATTTCGGAAGAGACGACCCTGACTTCACCTGGGAGGTCGTGAAGCCACTCAAGTGGGACAAACCTCAAGCTTAA

Protein Analysis

393

Amino Acids

43.25

Weight (kDa)

5.67

Isoelectric Point (pI)

24.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S-AdoMet_synt_N PF00438 4 - 101 6e-43 S-adenosylmethionine synthetase, N-terminal domain
S-AdoMet_synt_M PF02772 117 - 238 3.6e-47 S-adenosylmethionine synthetase, central domain
S-AdoMet_synt_C PF02773 240 - 381 1.3e-59 S-adenosylmethionine synthetase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 834
AccII CGCG 1 cut(s) 622
AclWI GGATC 1 cut(s) 991
AcuI CTGAAG 2 cut(s) 480, 1022
AdeI CACNNNGTG 1 cut(s) 734
AfaI GTAC 2 cut(s) 527, 936
AflIII ACRYGT 1 cut(s) 375
AgsI TTSAA 2 cut(s) 290, 1063
AjnI CCWGG 3 cut(s) 912, 1033, 1136
AjuI GAANNNNNNNTTGG 2 cut(s) 469, 501
AleI CACNNNNGTG 1 cut(s) 1159
AluBI AGCT 6 cut(s) 55, 359, 409, 791, 848, 1178
AluI AGCT 6 cut(s) 55, 359, 409, 791, 848, 1178
Alw21I GWGCWC 3 cut(s) 411, 451, 793
Alw26I GTCTC 5 cut(s) 122, 458, 922, 1010, 1113
AlwI GGATC 1 cut(s) 991
Ama87I CYCGRG 1 cut(s) 938
AoxI GGCC 1 cut(s) 706
ApeKI GCWGC 2 cut(s) 866, 1097
ArsI GACNNNNNNTTYG 2 cut(s) 258, 290
AspLEI GCGC 2 cut(s) 545, 622
AspS9I GGNCC 1 cut(s) 725
AsuHPI GGTGA 6 cut(s) 163, 176, 325, 374, 746, 1126
AvaI CYCGRG 1 cut(s) 938
AvaII GGWCC 1 cut(s) 725
BanII GRGCYC 4 cut(s) 302, 411, 793, 907
BbsI GAAGAC 2 cut(s) 354, 946
Bbv12I GWGCWC 3 cut(s) 411, 451, 793
BbvI GCAGC 2 cut(s) 878, 1109
BccI CCATC 4 cut(s) 494, 692, 709, 777
BceAI ACGGC 3 cut(s) 204, 468, 1110
BciT130I CCWGG 3 cut(s) 914, 1035, 1138
BclI TGATCA 1 cut(s) 642
BcoDI GTCTC 5 cut(s) 122, 458, 922, 1010, 1113
BfoI RGCGCY 1 cut(s) 546
BglII AGATCT 1 cut(s) 66
BisI GCNGC 2 cut(s) 867, 1098
BlsI GCNGC 2 cut(s) 868, 1099
BmcAI AGTACT 1 cut(s) 527
Bme1390I CCNGG 3 cut(s) 914, 1035, 1138
Bme18I GGWCC 1 cut(s) 725
BmeT110I CYCGRG 1 cut(s) 938
BmgT120I GGNCC 1 cut(s) 725
BmiI GGNNCC 2 cut(s) 552, 726
BmrFI CCNGG 3 cut(s) 914, 1035, 1138
BmsI GCATC 4 cut(s) 64, 76, 247, 727
BoxI GACNNNNGTC 1 cut(s) 512
BpiI GAAGAC 2 cut(s) 354, 946
Bpu10I CCTNAGC 1 cut(s) 405
BpuEI CTTGAG 5 cut(s) 116, 297, 614, 1142, 1158
BsaBI GATNNNNATC 1 cut(s) 1046
BsaI GGTCTC 1 cut(s) 922
BsaJI CCNNGG 3 cut(s) 177, 367, 1137
Bse118I RCCGGY 1 cut(s) 708
Bse1I ACTGG 2 cut(s) 554, 754
Bse3DI GCAATG 1 cut(s) 306
Bse8I GATNNNNATC 1 cut(s) 1046
BseBI CCWGG 3 cut(s) 914, 1035, 1138
BseDI CCNNGG 3 cut(s) 177, 367, 1137
BseGI GGATG 2 cut(s) 654, 788
BseJI GATNNNNATC 1 cut(s) 1046
BseMI GCAATG 1 cut(s) 306
BseMII CTCAG 3 cut(s) 15, 396, 825
BseNI ACTGG 2 cut(s) 554, 754
BseRI GAGGAG 1 cut(s) 1083
BseXI GCAGC 2 cut(s) 878, 1109
BseYI CCCAGC 1 cut(s) 585
Bsh1236I CGCG 1 cut(s) 622
BshFI GGCC 1 cut(s) 708
BsiHKAI GWGCWC 3 cut(s) 411, 451, 793
BsiHKCI CYCGRG 1 cut(s) 938
BsiSI CCGG 1 cut(s) 709
BslFI GGGAC 2 cut(s) 738, 1178
BsmAI GTCTC 5 cut(s) 122, 458, 922, 1010, 1113
BsmBI CGTCTC 2 cut(s) 458, 1113
BsmFI GGGAC 2 cut(s) 738, 1178
BsnI GGCC 1 cut(s) 708
Bso31I GGTCTC 1 cut(s) 922
BsoBI CYCGRG 1 cut(s) 938
Bsp1286I GDGCHC 5 cut(s) 302, 411, 451, 793, 907
Bsp143I GATC 8 cut(s) 66, 168, 576, 642, 717, 759, 996, 1005
BspANI GGCC 1 cut(s) 708
BspCNI CTCAG 3 cut(s) 16, 397, 824
BspFNI CGCG 1 cut(s) 622
BspLI GGNNCC 2 cut(s) 552, 726
BspPI GGATC 1 cut(s) 991
BspTNI GGTCTC 1 cut(s) 922
BsrDI GCAATG 1 cut(s) 306
BsrFI RCCGGY 1 cut(s) 708
BsrI ACTGG 2 cut(s) 554, 754
BssAI RCCGGY 1 cut(s) 708
BssECI CCNNGG 3 cut(s) 177, 367, 1137
BssMI GATC 8 cut(s) 66, 168, 576, 642, 717, 759, 996, 1005
BssT1I CCWWGG 2 cut(s) 177, 367
Bst2UI CCWGG 3 cut(s) 914, 1035, 1138
Bst4CI ACNGT 5 cut(s) 326, 520, 571, 601, 734
Bst6I CTCTTC 2 cut(s) 1058, 1111
BstC8I GCNNGC 3 cut(s) 91, 864, 898
BstDEI CTNAG 3 cut(s) 24, 405, 811
BstEII GGTNACC 1 cut(s) 362
BstF5I GGATG 2 cut(s) 654, 788
BstFNI CGCG 1 cut(s) 622
BstH2I RGCGCY 1 cut(s) 546
BstHHI GCGC 2 cut(s) 545, 622
BstKTI GATC 8 cut(s) 69, 171, 579, 645, 720, 762, 999, 1008
BstMAI GTCTC 5 cut(s) 122, 458, 922, 1010, 1113
BstMBI GATC 8 cut(s) 66, 168, 576, 642, 717, 759, 996, 1005
BstMWI GCNNNNNNNGC 2 cut(s) 897, 902
BstNI CCWGG 3 cut(s) 914, 1035, 1138
BstNSI RCATGY 3 cut(s) 135, 379, 641
BstPAI GACNNNNGTC 1 cut(s) 512
BstPI GGTNACC 1 cut(s) 362
BstSCI CCNGG 3 cut(s) 912, 1033, 1136
BstUI CGCG 1 cut(s) 622
BstV1I GCAGC 2 cut(s) 878, 1109
BstV2I GAAGAC 2 cut(s) 354, 946
BstX2I RGATCY 2 cut(s) 66, 996
BstXI CCANNNNNNTGG 1 cut(s) 1161
BstYI RGATCY 2 cut(s) 66, 996
BsuRI GGCC 1 cut(s) 708
BtsCI GGATG 2 cut(s) 654, 788
BtsIMutI CAGTG 3 cut(s) 390, 456, 516
Cac8I GCNNGC 3 cut(s) 91, 864, 898
CfoI GCGC 2 cut(s) 545, 622
Cfr10I RCCGGY 1 cut(s) 708
Cfr13I GGNCC 1 cut(s) 725
Csp6I GTAC 2 cut(s) 526, 935
CspCI CAANNNNNGTGG 2 cut(s) 858, 893
CviAII CATG 9 cut(s) 132, 148, 154, 376, 412, 425, 638, 794, 892
CviQI GTAC 2 cut(s) 526, 935
DdeI CTNAG 3 cut(s) 24, 405, 811
DpnI GATC 8 cut(s) 68, 170, 578, 644, 719, 761, 998, 1007
DpnII GATC 8 cut(s) 66, 168, 576, 642, 717, 759, 996, 1005
DraIII CACNNNGTG 1 cut(s) 734
Eam1104I CTCTTC 2 cut(s) 1058, 1111
EarI CTCTTC 2 cut(s) 1058, 1111
Ecl136II GAGCTC 2 cut(s) 409, 791
Eco130I CCWWGG 2 cut(s) 177, 367
Eco24I GRGCYC 4 cut(s) 302, 411, 793, 907
Eco31I GGTCTC 1 cut(s) 922
Eco47I GGWCC 1 cut(s) 725
Eco53kI GAGCTC 2 cut(s) 409, 791
Eco57I CTGAAG 2 cut(s) 480, 1022
Eco88I CYCGRG 1 cut(s) 938
Eco91I GGTNACC 1 cut(s) 362
EcoICRI GAGCTC 2 cut(s) 409, 791
EcoO65I GGTNACC 1 cut(s) 362
EcoRII CCWGG 3 cut(s) 912, 1033, 1136
EcoT14I CCWWGG 2 cut(s) 177, 367
EcoT38I GRGCYC 4 cut(s) 302, 411, 793, 907
ErhI CCWWGG 2 cut(s) 177, 367
Esp3I CGTCTC 2 cut(s) 458, 1113
FaeI CATG 9 cut(s) 135, 151, 157, 379, 415, 428, 641, 797, 895
FalI AAGNNNNNCTT 2 cut(s) 832, 864
FaqI GGGAC 2 cut(s) 738, 1178
FatI CATG 9 cut(s) 131, 147, 153, 375, 411, 424, 637, 793, 891
FbaI TGATCA 1 cut(s) 642
FblI GTMKAC 1 cut(s) 834
Fnu4HI GCNGC 2 cut(s) 867, 1098
FokI GGATG 2 cut(s) 641, 795
FriOI GRGCYC 4 cut(s) 302, 411, 793, 907
Fsp4HI GCNGC 2 cut(s) 867, 1098
GlaI GCGC 2 cut(s) 544, 621
GluI GCNGC 2 cut(s) 867, 1098
GsaI CCCAGC 1 cut(s) 589
HaeII RGCGCY 1 cut(s) 546
HaeIII GGCC 1 cut(s) 708
HapII CCGG 1 cut(s) 709
HhaI GCGC 2 cut(s) 545, 622
Hin1II CATG 9 cut(s) 135, 151, 157, 379, 415, 428, 641, 797, 895
Hin6I GCGC 2 cut(s) 543, 620
HinP1I GCGC 2 cut(s) 543, 620
HincII GTYRAC 3 cut(s) 283, 835, 961
HindII GTYRAC 3 cut(s) 283, 835, 961
HindIII AAGCTT 2 cut(s) 53, 1176
HinfI GANTC 4 cut(s) 26, 231, 421, 982
HpaI GTTAAC 1 cut(s) 283
HpaII CCGG 1 cut(s) 709
HphI GGTGA 6 cut(s) 163, 176, 325, 374, 746, 1126
Hpy166II GTNNAC 6 cut(s) 34, 283, 322, 565, 835, 961
Hpy188I TCNGA 6 cut(s) 25, 73, 241, 1031, 1089, 1115
Hpy188III TCNNGA 9 cut(s) 254, 344, 466, 574, 856, 986, 1000, 1009, 1147
Hpy8I GTNNAC 6 cut(s) 34, 283, 322, 565, 835, 961
HpyAV CCTTC 2 cut(s) 32, 1074
HpyCH4III ACNGT 5 cut(s) 326, 520, 571, 601, 734
HpyCH4IV ACGT 2 cut(s) 340, 754
HpyCH4V TGCA 4 cut(s) 77, 135, 270, 434
HpyF10VI GCNNNNNNNGC 2 cut(s) 897, 902
HpyF3I CTNAG 3 cut(s) 24, 405, 811
HpySE526I ACGT 2 cut(s) 340, 754
Hsp92II CATG 9 cut(s) 135, 151, 157, 379, 415, 428, 641, 797, 895
HspAI GCGC 2 cut(s) 543, 620
Ksp22I TGATCA 1 cut(s) 642
KspAI GTTAAC 1 cut(s) 283
Kzo9I GATC 8 cut(s) 66, 168, 576, 642, 717, 759, 996, 1005
LmnI GCTCC 4 cut(s) 356, 634, 788, 845
Lsp1109I GCAGC 2 cut(s) 878, 1109
LweI GCATC 4 cut(s) 64, 76, 247, 727
MaeII ACGT 2 cut(s) 340, 754
MaeIII GTNAC 6 cut(s) 209, 326, 362, 514, 601, 623
MalI GATC 8 cut(s) 68, 170, 578, 644, 719, 761, 998, 1007
MboI GATC 8 cut(s) 66, 168, 576, 642, 717, 759, 996, 1005
MboII GAAGA 8 cut(s) 211, 359, 481, 679, 946, 1015, 1075, 1128
MflI RGATCY 2 cut(s) 66, 996
MhlI GDGCHC 5 cut(s) 302, 411, 451, 793, 907
MlyI GAGTC 2 cut(s) 35, 430
MnlI CCTC 9 cut(s) 638, 704, 773, 791, 852, 1061, 1064, 1135, 1182
MseI TTAA 4 cut(s) 282, 491, 746, 1180
MslI CAYNNNNRTG 4 cut(s) 152, 735, 798, 1159
MspI CCGG 1 cut(s) 709
MspR9I CCNGG 3 cut(s) 914, 1035, 1138
MvaI CCWGG 3 cut(s) 914, 1035, 1138
MvnI CGCG 1 cut(s) 622
MwoI GCNNNNNNNGC 2 cut(s) 897, 902
NdeII GATC 8 cut(s) 66, 168, 576, 642, 717, 759, 996, 1005
NlaIII CATG 9 cut(s) 135, 151, 157, 379, 415, 428, 641, 797, 895
NlaIV GGNNCC 2 cut(s) 552, 726
NmuCI GTSAC 5 cut(s) 209, 326, 362, 514, 623
NspI RCATGY 3 cut(s) 135, 379, 641
OliI CACNNNNGTG 1 cut(s) 1159
PciI ACATGT 1 cut(s) 375
PcsI WCGNNNNNNNCGW 2 cut(s) 597, 1119
PfeI GAWTC 2 cut(s) 231, 982
PkrI GCNGC 2 cut(s) 868, 1099
PleI GAGTC 2 cut(s) 34, 429
PpsI GAGTC 2 cut(s) 34, 429
PscI ACATGT 1 cut(s) 375
PshAI GACNNNNGTC 1 cut(s) 512
Psp124BI GAGCTC 2 cut(s) 411, 793
Psp6I CCWGG 3 cut(s) 912, 1033, 1136
PspEI GGTNACC 1 cut(s) 362
PspFI CCCAGC 1 cut(s) 585
PspGI CCWGG 3 cut(s) 912, 1033, 1136
PspN4I GGNNCC 2 cut(s) 552, 726
PspPI GGNCC 1 cut(s) 725
PsuI RGATCY 2 cut(s) 66, 996
RsaI GTAC 2 cut(s) 527, 936
RsaNI GTAC 2 cut(s) 526, 935
RseI CAYNNNNRTG 4 cut(s) 152, 735, 798, 1159
SacI GAGCTC 2 cut(s) 411, 793
SalI GTCGAC 1 cut(s) 833
SaqAI TTAA 4 cut(s) 282, 491, 746, 1180
SatI GCNGC 2 cut(s) 867, 1098
Sau3AI GATC 8 cut(s) 66, 168, 576, 642, 717, 759, 996, 1005
Sau96I GGNCC 1 cut(s) 725
ScaI AGTACT 1 cut(s) 527
SchI GAGTC 2 cut(s) 35, 430
ScrFI CCNGG 3 cut(s) 914, 1035, 1138
SduI GDGCHC 5 cut(s) 302, 411, 451, 793, 907
SfaNI GCATC 4 cut(s) 64, 76, 247, 727
SinI GGWCC 1 cut(s) 725
SmiMI CAYNNNNRTG 4 cut(s) 152, 735, 798, 1159
SmlI CTYRAG 5 cut(s) 95, 312, 629, 1157, 1173
SmoI CTYRAG 5 cut(s) 95, 312, 629, 1157, 1173
SstI GAGCTC 2 cut(s) 411, 793
StyD4I CCNGG 3 cut(s) 912, 1033, 1136
StyI CCWWGG 2 cut(s) 177, 367
TaaI ACNGT 5 cut(s) 326, 520, 571, 601, 734
TaiI ACGT 2 cut(s) 343, 757
TaqI TCGA 2 cut(s) 834, 1023
TatI WGTACW 1 cut(s) 525
TfiI GAWTC 2 cut(s) 231, 982
Tru1I TTAA 4 cut(s) 282, 491, 746, 1180
Tru9I TTAA 4 cut(s) 282, 491, 746, 1180
TscAI CASTG 3 cut(s) 397, 463, 523
TseFI GTSAC 5 cut(s) 209, 326, 362, 514, 623
TseI GCWGC 2 cut(s) 866, 1097
Tsp45I GTSAC 5 cut(s) 209, 326, 362, 514, 623
TspDTI ATGAA 3 cut(s) 223, 411, 609
TspGWI ACGGA 4 cut(s) 197, 548, 792, 984
TspRI CASTG 3 cut(s) 397, 463, 523
VpaK11BI GGWCC 1 cut(s) 725
XceI RCATGY 3 cut(s) 135, 379, 641
XcmI CCANNNNNNNNNTGG 2 cut(s) 145, 151
XmiI GTMKAC 1 cut(s) 834
ZrmI AGTACT 1 cut(s) 527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.