Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003103

Physical Location & Seq

Genomic Coordinates Reverse (-)

14610883 .. 14619685

Gene Structure 8803 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G29900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3210 bp

ATGAGTGGACAATTCAATAATTCTCCACGAGGGGAAGACAAGGACGTGGAGGCTGGAACCAGCAGCTTCACCGAATATGAAGATAGTCCGTTTGACATTGCCAGTACTAAGAATGCTCCAGTGGAGCGGCTACGCCGTTGGAGGCAAGCTGCGCTTGTTCTTAATGCTTCTCGTCGATTTCGATATACGCTGGACTTAAAAAGGGAAGAAGATAAGAAACAGATGCTGAGGAAGATGAGAGCGCACGCCCAAGCAATAAGAGCTGCACACCTTTTTAAAGCAGCTGCAAGCCGCGTGACTGGAATTGCAAGTCCACTTCCAACTCCTGGCGGTGGTGATTTTGGTATCGGACAGGAGCAGATTGTGTCAATATCAAGGGATCAAAATATAGGAGCTCTTCAAGAGCTTGGAGGGGTAAGAGGGTTATCTGACCTGTTGAAAACAAACTTGGAGAAGGGTATACACGGGGATGATGATGACATATTGAAAAGGAAATCTGCTTTTGGATCAAACACATACCCTCAGAAGAAAGGGAGGAGTTTCTGGAGGTTTGTATGGGAAGCTTCTCAAGATCTTACTTTGATCATACTGATTGTAGCAGCAGTTGCTTCTTTGGCATTGGGAATAAAGACCGAGGGTATCGAAAAGGGATGGTACGATGGTATCAGCATTGCTTTTGCCGTTCTTCTTGTCATTGTGGTGACAGCTACCAGTGATTATCGGCAATCTCTTCAATTCCAGAACTTAAATGAAGAGAAAAGAAATATACGTCTAGAGGTAACCCGTGATGGGAGAAGAGTGGAGATTTCAATTTATGACATTGTAGTAGGCGATGTCATACCCCTCAATATTGGTGATCAGGTACCTGCGGATGGAGTTTTAGTTGCTGGACATTCCCTTGCAGTTGATGAGTCCAGCATGACTGGAGAGAGCAAAATTGTTCAAAAAAACTCTACTAAGCATCCATTCCTAATGTCTGGCTGTAAAGTTGCAGATGGCAATGGGACAATGTTGGTTACTGGGGTAGGGGTCAACACTGAATGGGGCTTACTAATGGCTAGCGTCTCAGAGGACAATGGTGGAGAAACACCATTGCAGGTGCGCTTGAATGGTGTAGCAACATTTATCGGGATTGTCGGGCTCACAGTTGCTGGCGTTGTATTATTTGTCCTAGTTGTCCGTTACTTTACCGGTCACACGAAGAATGAACAGGGAGGCCCACAGTTTATTGGAGGGAAGACAAAATTTGAGCACGTGCTAGATGATCTTGTTGAAATCTTCACTGTTGCAGTTACAATTGTTGTAGTGGCAGTGCCTGAAGGGCTTCCTTTAGCTGTTACCTTGACTCTTGCGTATTCCATGAGAAAAATGATGGCAGATAAAGCTTTGGTGCGTAGGCTTTCAGCCTGTGAAACCATGGGGTCTGCAACAACAATTTGCAGTGATAAGACTGGAACTTTGACCTTAAACGAGATGACCGTTGTTGAGTGTTATGCTGGGTTACAAAAGATGGATTCTCCCGACAGCAGCTCAAAATTGCCATCTGCTTTTACATCCATACTTGTTGAGGGTATTGCTCACAATACAACCGGCAGTGTGTTCCGATCTGAAAGTGGTGAGATTCAGGTTTCTGGATCTCCTACAGAAAGAGCAATTCTCAATTGGGCGATAAAGTTGGGTATGGATTTTGATGCTCTTAAGTCTGAGTCTTCTGCTGTACAATTTTTTCCATTCAACTCAGAGAAGAAACGAGGAGGTGTAGCAGTGAAATCACCAGATTCGAGTGTCCATATTCACTGGAAAGGTGCTGCCGAAATTGTTTTGGGATCCTGCACGCACTATATGGATGAGAGTGAGAGTTTTGTAGATATGAGTGAAGATAAGATGGGTGGGTTAAAAGATGCTATCGATGATATGGCTGCAAGGAGTCTGCGCTGTGTTGCAATTGCCTTCCGAACATTTGAAGCGGATAAGATTCCAACTGATGAAGAGCAACTCTCTAGATGGGAATTACCTGAGGATGATCTTATATTGTTGGCTATCGTTGGTATTAAGGATCCATGTCGCCCAGGTGTCAAAAATTCAGTTTTACTGTGTCAACAAGCTGGAGTCAAGGTTCGTATGGTGACTGGTGATAACATTCAGACTGCCAAAGCAATTGCACTGGAGTGTGGTATATTAGCTTCAGACTCAGATGCTAGTGAGCCTAATCTGATTGAAGGAAAAGTATTTCGATCCTATTCAGAAGAAGAAAGAGATAGGATTTGTGAAGAGATATCTGTAATGGGTAGATCATCACCCAATGACAAACTTCTTCTTGTGCAATCGCTGAAGAGGAGGGGACACGTCGTGGCTGTGACTGGTGATGGAACCAATGATGCTCCTGCACTGCACGAGGCAGATATAGGTCTCGCAATGGGTATCCAAGGCACCGAAGTTGCAAAGGAAAAGTCAGACATCATTATCTTGGATGACAACTTTGAATCCGTTGTGAAGGTTGTCCGTTGGGGTCGATCTGTGTATGCGAATATTCAAAAGTTCATCCAGTTTCAGCTCACGGTTAATGTCGCAGCTCTTGTCATCAATGTGGTGGCTGCCATATCCGCGGGTGAAGTTCCTCTAACTGCAGTACAGCTCCTTTGGGTCAATCTTATAATGGATACTCTTGGGGCTCTTGCTTTAGCCACTGAGCCACCAACCGATCACTTAATGGATCGAGCGCCTGTTGGCAGAAGAGAACCTCTCATCACAAATATCATGTGGAGAAACTTGTTTATACAAGCGATGTACCAAGTGACAGTCTTGTTAATCCTCAATTTCCGTGGAATAAGTATCCTGCATCTGAAGAGTAAGCCAAATGCTGAGAGAGTGAAGAATACAGTCATCTTCAATGCCTTTGTCATCTGCCAGGTATTCAACGAGTTCAATGCACGGAAGCCAGATGAAATAAACATTTTCCGAGGAGTTCTCAGGAATCACCTTTTTGTGGGCATCATCTCTATCACCATTGTGCTCCAGGTAGTCATCGTCGAGTTCCTTGGAACATTTGCCTCAACGACTAAGCTTGATTGGGAGATGTGGCTCGTCTGTATCGGAATCGGTTCTATCAGTTGGCCTTTGGCGGTGATCGGAAAATTGATACCGGTTCCAGAAACTCCGGTTAGTCAATACTTTAGAATAAACCGGTGGAGAAGGAACTCATCAGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0009506 GO:0009605 GO:0009607 GO:0009624 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030054 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0043621 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1069

Amino Acids

116.86

Weight (kDa)

5.88

Isoelectric Point (pI)

45.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CaATP_NAI	PF12515	28 - 70	2.5e-17	Ca2+-ATPase N terminal autoinhibitory domain
Cation_ATPase_N	PF00690	136 - 204	3.4e-14	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	259 - 355	1.9e-20	P-type ATPase actuator domain
Hydrolase	PF00702	478 - 801	3.5e-15	haloacid dehalogenase-like hydrolase
Cation_ATPase	PF13246	519 - 690	1.5e-31	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	872 - 1047	3.4e-44	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0003103)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29900 AT4G29900 AT5G57110 AT5G57110 AT5G57110
fragaria_vesca	FvH4_4g06940 FvH4_4g06940 FvH4_4g06940 FvH4_4g06940 FvH4_4g06940 FvH4_4g06940 FvH4_4g06940
malus_domestica	MD13G1241000.v1.1 MD16G1245600.v1.1 MD16G1246100.v1.1
prunus_persica	Prupe.1G072600_v2.0.a1 Prupe.8G012900_v2.0.a1
pyrus_communis	pycom13g21220
rosa_chinensis	RchiOBHm_Chr4g0398891 RchiOBHm_Chr4g0398951
rosa_laevigata	RLG00000009307 RLG00000009309 RLG00000009365
rosa_multiflora	Rmu_sc0004094.1_g000033 Rmu_ssc0000064.1_g000006
rosa_roxburghii	Rroxscaffold_5G00343340 Rroxscaffold_5G00343930 Rroxscaffold_5G00344000
rosa_rugosa	Rorug04G0013200
rosa_samantha	Rh4AG091100 Rh4CG093100 Rh4CG099100 Rh4CG099400
rosa_wichuraiana	Rw4G007100 Rw4G007130 Rw4G007500 Rw4G007540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2654
AarI	CACCTGC	1 cut(s)	1087
Acc36I	ACCTGC	2 cut(s)	874, 1087
Acc65I	GGTACC	1 cut(s)	862
AccB1I	GGYRCC	2 cut(s)	862, 2429
AccB7I	CCANNNNNTGG	1 cut(s)	326
AccBSI	CCGCTC	1 cut(s)	127
AccI	GTMKAC	1 cut(s)	460
AccII	CGCG	2 cut(s)	294, 2606
AciI	CCGC	8 cut(s)	127, 292, 330, 869, 1967, 2604, 2606, 3122
AclWI	GGATC	9 cut(s)	387, 514, 1642, 1821, 1834, 2051, 2064, 2229, 2721
AcsI	RAATTY	2 cut(s)	1244, 2080
AcuI	CTGAAG	4 cut(s)	1338, 2169, 2351, 2864
AcvI	CACGTG	1 cut(s)	1255
AdeI	CACNNNGTG	1 cut(s)	2350
AfaI	GTAC	6 cut(s)	106, 656, 864, 1719, 2631, 2789
AfiI	CCNNNNNNNGG	5 cut(s)	326, 332, 789, 872, 2986
AflII	CTTAAG	1 cut(s)	1697
AflIII	ACRYGT	1 cut(s)	2344
AgeI	ACCGGT	3 cut(s)	1190, 3142, 3183
AjiI	CACGTC	2 cut(s)	46, 2347
AjnI	CCWGG	4 cut(s)	325, 2068, 2907, 3015
AjuI	GAANNNNNNNTTGG	2 cut(s)	431, 463
AleI	CACNNNNGTG	2 cut(s)	2167, 3008
AloI	GAACNNNNNNTCC	2 cut(s)	2100, 2132
Alw21I	GWGCWC	3 cut(s)	397, 1254, 3015
Alw26I	GTCTC	2 cut(s)	1069, 2414
AlwI	GGATC	9 cut(s)	387, 514, 1642, 1821, 1834, 2051, 2064, 2229, 2721
AlwNI	CAGNNNCTG	3 cut(s)	226, 1151, 1316
AoxI	GGCC	2 cut(s)	1216, 3113
ApoI	RAATTY	2 cut(s)	1244, 2080
ArsI	GACNNNNNNTTYG	4 cut(s)	1441, 1473, 2435, 2467
AsiGI	ACCGGT	3 cut(s)	1190, 3142, 3183
Asp700I	GAANNNNTTC	2 cut(s)	1323, 3100
Asp718I	GGTACC	1 cut(s)	862
AspLEI	GCGC	5 cut(s)	154, 244, 1104, 1935, 2722
AspS9I	GGNCC	1 cut(s)	1217
AsuNHI	GCTAGC	1 cut(s)	1058
AxyI	CCTNAGG	1 cut(s)	2016
BaeI	ACNNNNGTAYC	4 cut(s)	646, 646, 679, 679
BamHI	GGATCC	2 cut(s)	1826, 2056
BanI	GGYRCC	2 cut(s)	862, 2429
BanII	GRGCYC	3 cut(s)	397, 1143, 2674
BarI	GAAGNNNNNNTAC	2 cut(s)	2167, 2199
BauI	CACGAG	2 cut(s)	27, 2393
BbrPI	CACGTG	1 cut(s)	1255
BbsI	GAAGAC	3 cut(s)	42, 1244, 1701
Bbv12I	GWGCWC	3 cut(s)	397, 1254, 3015
BbvCI	CCTCAGC	1 cut(s)	227
BceAI	ACGGC	2 cut(s)	120, 665
BcgI	CGANNNNNNTGC	2 cut(s)	2909, 2943
BciT130I	CCWGG	4 cut(s)	327, 2070, 2909, 3017
BciVI	GTATCC	3 cut(s)	2432, 2653, 2843
BclI	TGATCA	2 cut(s)	582, 856
BcoDI	GTCTC	2 cut(s)	1069, 2414
BfaI	CTAG	6 cut(s)	773, 1059, 1172, 1259, 2001, 2199
BfmI	CTRYAG	2 cut(s)	1641, 2625
BfoI	RGCGCY	1 cut(s)	2723
BfrI	CTTAAG	1 cut(s)	1697
BfuAI	ACCTGC	2 cut(s)	874, 1087
BfuI	GTATCC	3 cut(s)	2432, 2653, 2843
BglI	GCCNNNNNGGC	1 cut(s)	1321
BglII	AGATCT	1 cut(s)	571
BmcAI	AGTACT	1 cut(s)	106
Bme1390I	CCNGG	4 cut(s)	327, 2070, 2909, 3017
BmgBI	CACGTC	2 cut(s)	46, 2347
BmgT120I	GGNCC	1 cut(s)	1217
BmiI	GGNNCC	7 cut(s)	58, 864, 1828, 2058, 2371, 2431, 3147
BmrFI	CCNGG	4 cut(s)	327, 2070, 2909, 3017
BmrI	ACTGGG	1 cut(s)	1029
BmsI	GCATC	8 cut(s)	213, 970, 1681, 1891, 2185, 2368, 2848, 3000
BmtI	GCTAGC	1 cut(s)	1062
BmuI	ACTGGG	1 cut(s)	1029
BpiI	GAAGAC	3 cut(s)	42, 1244, 1701
BplI	GAGNNNNNCTC	8 cut(s)	1641, 1673, 1982, 2014, 2727, 2759, 2952, 2984
BpmI	CTGGAG	6 cut(s)	102, 565, 945, 2127, 2186, 2999
Bpu10I	CCTNAGC	1 cut(s)	227
BpuEI	CTTGAG	1 cut(s)	552
Bsa29I	ATCGAT	1 cut(s)	1908
BsaAI	YACGTR	1 cut(s)	1255
BsaI	GGTCTC	1 cut(s)	2414
BsaJI	CCNNGG	8 cut(s)	633, 1416, 2068, 2425, 2604, 2821, 2959, 3037
BsaWI	WCCGGW	4 cut(s)	1190, 3142, 3157, 3183
BsaXI	ACNNNNNCTCC	4 cut(s)	867, 897, 2100, 2130
Bsc4I	CCNNNNNNNGG	5 cut(s)	326, 332, 789, 872, 2986
Bse118I	RCCGGY	4 cut(s)	1190, 1589, 3142, 3183
Bse21I	CCTNAGG	1 cut(s)	2016
Bse3DI	GCAATG	5 cut(s)	96, 669, 1006, 1091, 2421
BseBI	CCWGG	4 cut(s)	327, 2070, 2909, 3017
BseCI	ATCGAT	1 cut(s)	1908
BseDI	CCNNGG	8 cut(s)	633, 1416, 2068, 2425, 2604, 2821, 2959, 3037
BseGI	GGATG	9 cut(s)	475, 656, 877, 961, 1553, 1852, 2026, 2476, 2541
BseLI	CCNNNNNNNGG	5 cut(s)	326, 332, 789, 872, 2986
BseMI	GCAATG	5 cut(s)	96, 669, 1006, 1091, 2421
BseRI	GAGGAG	4 cut(s)	550, 1767, 2350, 2976
BseYI	CCCAGC	1 cut(s)	1496
BsgI	GTGCAG	4 cut(s)	249, 1816, 2370, 2375
Bsh1236I	CGCG	2 cut(s)	294, 2606
BshFI	GGCC	2 cut(s)	1218, 3115
BshNI	GGYRCC	2 cut(s)	862, 2429
BshTI	ACCGGT	3 cut(s)	1190, 3142, 3183
BshVI	ATCGAT	1 cut(s)	1908
BsiHKAI	GWGCWC	3 cut(s)	397, 1254, 3015
BsiSI	CCGG	5 cut(s)	1191, 1590, 3143, 3158, 3184
BslFI	GGGAC	2 cut(s)	1018, 2355
BslI	CCNNNNNNNGG	5 cut(s)	326, 332, 789, 872, 2986
BsmAI	GTCTC	2 cut(s)	1069, 2414
BsmBI	CGTCTC	1 cut(s)	1069
BsmFI	GGGAC	2 cut(s)	1018, 2355
BsmI	GAATGC	1 cut(s)	118
BsnI	GGCC	2 cut(s)	1218, 3115
Bso31I	GGTCTC	1 cut(s)	2414
Bsp1286I	GDGCHC	5 cut(s)	397, 1143, 1254, 2674, 3015
Bsp1407I	TGTACA	1 cut(s)	1717
Bsp19I	CCATGG	1 cut(s)	1416
BspACI	CCGC	8 cut(s)	127, 292, 330, 869, 1967, 2604, 2606, 3122
BspANI	GGCC	2 cut(s)	1218, 3115
BspDI	ATCGAT	1 cut(s)	1908
BspFNI	CGCG	2 cut(s)	294, 2606
BspLI	GGNNCC	7 cut(s)	58, 864, 1828, 2058, 2371, 2431, 3147
BspMAI	CTGCAG	1 cut(s)	2629
BspMI	ACCTGC	2 cut(s)	874, 1087
BspOI	GCTAGC	1 cut(s)	1062
BspPI	GGATC	9 cut(s)	387, 514, 1642, 1821, 1834, 2051, 2064, 2229, 2721
BspQI	GCTCTTC	2 cut(s)	402, 1983
BspT107I	GGYRCC	2 cut(s)	862, 2429
BspTI	CTTAAG	1 cut(s)	1697
BspTNI	GGTCTC	1 cut(s)	2414
BsrBI	CCGCTC	1 cut(s)	127
BsrDI	GCAATG	5 cut(s)	96, 669, 1006, 1091, 2421
BsrFI	RCCGGY	4 cut(s)	1190, 1589, 3142, 3183
BsrGI	TGTACA	1 cut(s)	1717
BssAI	RCCGGY	4 cut(s)	1190, 1589, 3142, 3183
BssECI	CCNNGG	8 cut(s)	633, 1416, 2068, 2425, 2604, 2821, 2959, 3037
BssNAI	GTATAC	1 cut(s)	461
BssSI	CACGAG	2 cut(s)	27, 2393
BssT1I	CCWWGG	3 cut(s)	1416, 2425, 3037
Bst1107I	GTATAC	1 cut(s)	461
Bst2BI	CACGAG	2 cut(s)	27, 2393
Bst2UI	CCWGG	4 cut(s)	327, 2070, 2909, 3017
Bst4CI	ACNGT	8 cut(s)	1147, 1224, 1285, 1480, 2094, 2560, 2800, 2881
Bst6I	CTCTTC	9 cut(s)	402, 735, 747, 790, 1983, 2265, 2327, 2728, 2840
BstAFI	CTTAAG	1 cut(s)	1697
BstAPI	GCANNNNNTGC	1 cut(s)	605
BstAUI	TGTACA	1 cut(s)	1717
BstBAI	YACGTR	1 cut(s)	1255
BstC8I	GCNNGC	6 cut(s)	147, 246, 289, 1060, 1153, 1835
BstDSI	CCRYGG	3 cut(s)	1416, 2604, 2821
BstEII	GGTNACC	1 cut(s)	778
BstF5I	GGATG	9 cut(s)	475, 656, 877, 961, 1553, 1852, 2026, 2476, 2541
BstFNI	CGCG	2 cut(s)	294, 2606
BstH2I	RGCGCY	1 cut(s)	2723
BstHHI	GCGC	5 cut(s)	154, 244, 1104, 1935, 2722
BstMAI	GTCTC	2 cut(s)	1069, 2414
BstMWI	GCNNNNNNNGC	7 cut(s)	151, 260, 605, 614, 1321, 1382, 2603
BstNI	CCWGG	4 cut(s)	327, 2070, 2909, 3017
BstPI	GGTNACC	1 cut(s)	778
BstSCI	CCNGG	4 cut(s)	325, 2068, 2907, 3015
BstSFI	CTRYAG	2 cut(s)	1641, 2625
BstUI	CGCG	2 cut(s)	294, 2606
BstV2I	GAAGAC	3 cut(s)	42, 1244, 1701
BstX2I	RGATCY	4 cut(s)	571, 1634, 1826, 2056
BstYI	RGATCY	4 cut(s)	571, 1634, 1826, 2056
BstZ17I	GTATAC	1 cut(s)	461
Bsu15I	ATCGAT	1 cut(s)	1908
Bsu36I	CCTNAGG	1 cut(s)	2016
BsuI	GTATCC	3 cut(s)	2432, 2653, 2843
BsuRI	GGCC	2 cut(s)	1218, 3115
BsuTUI	ATCGAT	1 cut(s)	1908
BtgI	CCRYGG	3 cut(s)	1416, 2604, 2821
BtgZI	GCGATG	2 cut(s)	846, 2798
BtrI	CACGTC	2 cut(s)	46, 2347
BtsCI	GGATG	9 cut(s)	475, 656, 877, 961, 1553, 1852, 2026, 2476, 2541
BtsI	GCAGTG	5 cut(s)	1317, 1447, 1600, 1770, 2387
BveI	ACCTGC	2 cut(s)	874, 1087
Cac8I	GCNNGC	6 cut(s)	147, 246, 289, 1060, 1153, 1835
CaiI	CAGNNNCTG	3 cut(s)	226, 1151, 1316
CfoI	GCGC	5 cut(s)	154, 244, 1104, 1935, 2722
Cfr10I	RCCGGY	4 cut(s)	1190, 1589, 3142, 3183
Cfr13I	GGNCC	1 cut(s)	1217
Cfr42I	CCGCGG	1 cut(s)	2607
ClaI	ATCGAT	1 cut(s)	1908
CseI	GACGC	1 cut(s)	1051
Csp6I	GTAC	6 cut(s)	105, 655, 863, 1718, 2630, 2788
CspAI	ACCGGT	3 cut(s)	1190, 3142, 3183
CspCI	CAANNNNNGTGG	2 cut(s)	2803, 2838
CviAII	CATG	5 cut(s)	919, 1360, 1417, 2061, 2758
CviQI	GTAC	6 cut(s)	105, 655, 863, 1718, 2630, 2788
DraI	TTTAAA	1 cut(s)	277
DraIII	CACNNNGTG	1 cut(s)	2350
Eam1104I	CTCTTC	9 cut(s)	402, 735, 747, 790, 1983, 2265, 2327, 2728, 2840
EarI	CTCTTC	9 cut(s)	402, 735, 747, 790, 1983, 2265, 2327, 2728, 2840
Ecl136II	GAGCTC	1 cut(s)	395
Eco130I	CCWWGG	3 cut(s)	1416, 2425, 3037
Eco24I	GRGCYC	3 cut(s)	397, 1143, 2674
Eco31I	GGTCTC	1 cut(s)	2414
Eco32I	GATATC	1 cut(s)	2277
Eco53kI	GAGCTC	1 cut(s)	395
Eco57I	CTGAAG	4 cut(s)	1338, 2169, 2351, 2864
Eco72I	CACGTG	1 cut(s)	1255
Eco81I	CCTNAGG	1 cut(s)	2016
Eco91I	GGTNACC	1 cut(s)	778
EcoICRI	GAGCTC	1 cut(s)	395
EcoO65I	GGTNACC	1 cut(s)	778
EcoRII	CCWGG	4 cut(s)	325, 2068, 2907, 3015
EcoRV	GATATC	1 cut(s)	2277
EcoT14I	CCWWGG	3 cut(s)	1416, 2425, 3037
EcoT38I	GRGCYC	3 cut(s)	397, 1143, 2674
ErhI	CCWWGG	3 cut(s)	1416, 2425, 3037
Esp3I	CGTCTC	1 cut(s)	1069
FaeI	CATG	5 cut(s)	922, 1363, 1420, 2064, 2761
FalI	AAGNNNNNCTT	2 cut(s)	138, 170
FaqI	GGGAC	2 cut(s)	1018, 2355
FatI	CATG	5 cut(s)	918, 1359, 1416, 2060, 2757
FauI	CCCGC	1 cut(s)	2599
FbaI	TGATCA	2 cut(s)	582, 856
FblI	GTMKAC	1 cut(s)	460
FokI	GGATG	9 cut(s)	482, 663, 884, 948, 1540, 1859, 2033, 2483, 2528
FriOI	GRGCYC	3 cut(s)	397, 1143, 2674
FspBI	CTAG	6 cut(s)	773, 1059, 1172, 1259, 2001, 2199
GlaI	GCGC	5 cut(s)	153, 243, 1103, 1934, 2721
GsaI	CCCAGC	1 cut(s)	1500
GsuI	CTGGAG	6 cut(s)	102, 565, 945, 2127, 2186, 2999
HaeII	RGCGCY	1 cut(s)	2723
HaeIII	GGCC	2 cut(s)	1218, 3115
HapII	CCGG	5 cut(s)	1191, 1590, 3143, 3158, 3184
HgaI	GACGC	1 cut(s)	1051
HhaI	GCGC	5 cut(s)	154, 244, 1104, 1935, 2722
Hin1II	CATG	5 cut(s)	922, 1363, 1420, 2064, 2761
Hin6I	GCGC	5 cut(s)	152, 242, 1102, 1933, 2720
HinP1I	GCGC	5 cut(s)	152, 242, 1102, 1933, 2720
HincII	GTYRAC	2 cut(s)	1033, 2099
HindII	GTYRAC	2 cut(s)	1033, 2099
HindIII	AAGCTT	3 cut(s)	561, 1383, 3062
HpaII	CCGG	5 cut(s)	1191, 1590, 3143, 3158, 3184
Hpy166II	GTNNAC	5 cut(s)	8, 314, 461, 1033, 2099
Hpy8I	GTNNAC	5 cut(s)	8, 314, 461, 1033, 2099
Hpy99I	CGWCG	3 cut(s)	177, 2351, 3032
HpyAV	CCTTC	6 cut(s)	448, 1313, 1960, 2213, 2488, 3186
HpyCH4III	ACNGT	8 cut(s)	1147, 1224, 1285, 1480, 2094, 2560, 2800, 2881
HpyCH4IV	ACGT	4 cut(s)	45, 769, 1254, 2346
HpyF10VI	GCNNNNNNNGC	7 cut(s)	151, 260, 605, 614, 1321, 1382, 2603
HpySE526I	ACGT	4 cut(s)	45, 769, 1254, 2346
Hsp92II	CATG	5 cut(s)	922, 1363, 1420, 2064, 2761
HspAI	GCGC	5 cut(s)	152, 242, 1102, 1933, 2720
KpnI	GGTACC	1 cut(s)	866
Ksp22I	TGATCA	2 cut(s)	582, 856
KspI	CCGCGG	1 cut(s)	2607
LguI	GCTCTTC	2 cut(s)	402, 1983
LmnI	GCTCC	7 cut(s)	121, 124, 355, 392, 2386, 2640, 3018
LweI	GCATC	8 cut(s)	213, 970, 1681, 1891, 2185, 2368, 2848, 3000
MaeI	CTAG	6 cut(s)	773, 1059, 1172, 1259, 2001, 2199
MaeII	ACGT	4 cut(s)	45, 769, 1254, 2346
MbiI	CCGCTC	1 cut(s)	127
MfeI	CAATTG	4 cut(s)	1296, 1660, 1944, 2157
MflI	RGATCY	4 cut(s)	571, 1634, 1826, 2056
MhlI	GDGCHC	5 cut(s)	397, 1143, 1254, 2674, 3015
MlyI	GAGTC	6 cut(s)	920, 1339, 1715, 1936, 2118, 2183
MmeI	TCCRAC	3 cut(s)	119, 344, 2003
MroXI	GAANNNNTTC	2 cut(s)	1323, 3100
MslI	CAYNNNNRTG	5 cut(s)	468, 698, 2167, 2585, 3008
MspA1I	CMGCKG	2 cut(s)	284, 2606
MspCI	CTTAAG	1 cut(s)	1697
MspI	CCGG	5 cut(s)	1191, 1590, 3143, 3158, 3184
MspR9I	CCNGG	4 cut(s)	327, 2070, 2909, 3017
MunI	CAATTG	4 cut(s)	1296, 1660, 1944, 2157
Mva1269I	GAATGC	1 cut(s)	118
MvaI	CCWGG	4 cut(s)	327, 2070, 2909, 3017
MvnI	CGCG	2 cut(s)	294, 2606
MwoI	GCNNNNNNNGC	7 cut(s)	151, 260, 605, 614, 1321, 1382, 2603
NcoI	CCATGG	1 cut(s)	1416
NheI	GCTAGC	1 cut(s)	1058
NlaIII	CATG	5 cut(s)	922, 1363, 1420, 2064, 2761
NlaIV	GGNNCC	7 cut(s)	58, 864, 1828, 2058, 2371, 2431, 3147
NmuCI	GTSAC	6 cut(s)	295, 700, 1193, 2125, 2356, 2794
OliI	CACNNNNGTG	2 cut(s)	2167, 3008
PaqCI	CACCTGC	1 cut(s)	1087
PciSI	GCTCTTC	2 cut(s)	402, 1983
PcsI	WCGNNNNNNNCGW	2 cut(s)	178, 1476
PctI	GAATGC	1 cut(s)	118
PdmI	GAANNNNTTC	2 cut(s)	1323, 3100
PfeI	GAWTC	7 cut(s)	1514, 1621, 1778, 1975, 2483, 2974, 3096
PflMI	CCANNNNNTGG	1 cut(s)	326
PinAI	ACCGGT	3 cut(s)	1190, 3142, 3183
PleI	GAGTC	6 cut(s)	919, 1339, 1714, 1935, 2117, 2183
PmaCI	CACGTG	1 cut(s)	1255
PmlI	CACGTG	1 cut(s)	1255
PpsI	GAGTC	6 cut(s)	919, 1339, 1714, 1935, 2117, 2183
Ppu21I	YACGTR	1 cut(s)	1255
PsiI	TTATAA	1 cut(s)	2654
Psp124BI	GAGCTC	1 cut(s)	397
Psp6I	CCWGG	4 cut(s)	325, 2068, 2907, 3015
PspCI	CACGTG	1 cut(s)	1255
PspEI	GGTNACC	1 cut(s)	778
PspFI	CCCAGC	1 cut(s)	1496
PspGI	CCWGG	4 cut(s)	325, 2068, 2907, 3015
PspN4I	GGNNCC	7 cut(s)	58, 864, 1828, 2058, 2371, 2431, 3147
PspPI	GGNCC	1 cut(s)	1217
PstI	CTGCAG	1 cut(s)	2629
PstNI	CAGNNNCTG	3 cut(s)	226, 1151, 1316
PsuI	RGATCY	4 cut(s)	571, 1634, 1826, 2056
PvuII	CAGCTG	1 cut(s)	284
RsaI	GTAC	6 cut(s)	106, 656, 864, 1719, 2631, 2789
RsaNI	GTAC	6 cut(s)	105, 655, 863, 1718, 2630, 2788
RseI	CAYNNNNRTG	5 cut(s)	468, 698, 2167, 2585, 3008
SacI	GAGCTC	1 cut(s)	397
SacII	CCGCGG	1 cut(s)	2607
SapI	GCTCTTC	2 cut(s)	402, 1983
Sau96I	GGNCC	1 cut(s)	1217
ScaI	AGTACT	1 cut(s)	106
SchI	GAGTC	6 cut(s)	920, 1339, 1715, 1936, 2118, 2183
ScrFI	CCNGG	4 cut(s)	327, 2070, 2909, 3017
SduI	GDGCHC	5 cut(s)	397, 1143, 1254, 2674, 3015
SfaNI	GCATC	8 cut(s)	213, 970, 1681, 1891, 2185, 2368, 2848, 3000
SfcI	CTRYAG	2 cut(s)	1641, 2625
Sfr303I	CCGCGG	1 cut(s)	2607
SgrBI	CCGCGG	1 cut(s)	2607
SmiMI	CAYNNNNRTG	5 cut(s)	468, 698, 2167, 2585, 3008
SmlI	CTYRAG	2 cut(s)	567, 1697
SmoI	CTYRAG	2 cut(s)	567, 1697
SsiI	CCGC	8 cut(s)	127, 292, 330, 869, 1967, 2604, 2606, 3122
SspI	AATATT	2 cut(s)	850, 2530
SspMI	CTAG	6 cut(s)	773, 1059, 1172, 1259, 2001, 2199
SstI	GAGCTC	1 cut(s)	397
StyD4I	CCNGG	4 cut(s)	325, 2068, 2907, 3015
StyI	CCWWGG	3 cut(s)	1416, 2425, 3037
TaaI	ACNGT	8 cut(s)	1147, 1224, 1285, 1480, 2094, 2560, 2800, 2881
TaiI	ACGT	4 cut(s)	48, 772, 1257, 2349
TaqI	TCGA	9 cut(s)	175, 181, 642, 1781, 1908, 2233, 2512, 2716, 3030
TaqII	GACCGA	1 cut(s)	647
TatI	WGTACW	3 cut(s)	104, 1717, 2629
TauI	GCSGC	2 cut(s)	130, 294
TfiI	GAWTC	7 cut(s)	1514, 1621, 1778, 1975, 2483, 2974, 3096
TseFI	GTSAC	6 cut(s)	295, 700, 1193, 2125, 2356, 2794
Tsp45I	GTSAC	6 cut(s)	295, 700, 1193, 2125, 2356, 2794
TspDTI	ATGAA	6 cut(s)	93, 765, 1221, 2001, 2530, 2958
TspGWI	ACGGA	6 cut(s)	78, 1169, 2476, 2492, 2810, 2947
Van91I	CCANNNNNTGG	1 cut(s)	326
Vha464I	CTTAAG	1 cut(s)	1697
XapI	RAATTY	2 cut(s)	1244, 2080
XbaI	TCTAGA	2 cut(s)	772, 2000
XmiI	GTMKAC	1 cut(s)	460
XmnI	GAANNNNTTC	2 cut(s)	1323, 3100
XspI	CTAG	6 cut(s)	773, 1059, 1172, 1259, 2001, 2199
ZrmI	AGTACT	1 cut(s)	106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.