Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005234

Physical Location & Seq

Genomic Coordinates Reverse (-)

16905579 .. 16908357

Gene Structure 2779 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G35640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1068 bp

ATGGCTTGTATAAACGGCGAGAATCGTGATTTTTCTTCCTCGTCATCTTTGTCTTCTCTTCCAATGATTGTCTCCCGGAACTTTTCTGCCAGAGACGATGGAGAGACCGGTGACGAGTTTCCTTTCGAGAGGATTTTCCCGGTTTACGCTAGAGGAACCCTTAATCCCGTGGCCGACCCGGTTTTGCTGGATTTTACCAATTCTAGTTATGACCCAATTTGGGATTCTATAAGAGAAGAAGCTAAGCTTGAGGCAGAAGAGGAGCCGGTTTTGAGTAGCTTCTTGTATGCTAGTATCTTGTCGCATGACTGTTTAGAGCAAGCATTGAGTTTTGTTCTAGCTAACCGTCTCCAAAACCCTACCTTGTTGGCAACTCAGCTTATGGATATATTTTGCAACGTTATGGTACATGACAGAGGTATTCAAAGCTCGATTCGTCTTGATGTTCAGGCATTCAAAGACAGAGATCCTGCTTGTCTATCGTATAGTTCGGCTATTTTACATCTGAAGGGCTATCTTGCACTGCAGGCGTATAGAGTAGCACATAAGTTGTGGAAGCAAGGAAGAAAACTATTAGCATTGGCACTGCAAAGCCGAGTAAGCGAGGTTTTTGGAATCGATATTCATCCCGCTGCAAGAATTGGGAAAGGAATATTGTTGGATCATGGAACTGGTGTGGTCATAGGTGAGACTGCTGTGATAGGCGACCGTGTCTCAATTTTGCATGGTGTGACATTAGGAGGAACTGGGAAAGAAACCGGTGACCGCCATCCAAATATAGGCGACGGTGCTCTTCTTGGAGCATGTGTGACTATACTTGGTAACATTAAGATAGGCGCTGGAGCAATGGTAGCTGCTGGTTCGCTTGTGTTAAAGGATGTTCCTTCGCATAGCATGGTGGCTGGAAATCCAGCAAAACTCATCGGGTTTGTTGATGAGCAAGATCCATCTATGACAATGGAGCATGATGCTACCAGAGAGTTCTTTCAAAATGTAGCTGTTGCTTATAGAGAGACAATACCAAATGGATCTTCAGTTTCAGGGAGTTGCAGGGAAAGGAGACATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0000103 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006534 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008374 GO:0008652 GO:0009001 GO:0009058 GO:0009069 GO:0009070 GO:0009987 GO:0016053 GO:0016407 GO:0016412 GO:0016413 GO:0016740 GO:0016746 GO:0016747 GO:0019344 GO:0019752 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko00920 ko01100 ko01110 ko01120 ko01200 ko01230 ko05111 map00270 map00920 map01100 map01110 map01120 map01200 map01230 map05111

Pfam Domains

Protein Families

Hexapep SATase_N

Protein Analysis

355

Amino Acids

38.42

Weight (kDa)

5.56

Isoelectric Point (pI)

38.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SATase_N	PF06426	73 - 177	4.7e-37	Serine acetyltransferase, N-terminal
Hexapep	PF00132	257 - 290	8.2e-07	Bacterial transferase hexapeptide (six repeats)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005234)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17640 AT4G35640
fragaria_vesca	FvH4_1g10540 FvH4_1g10540 FvH4_1g10540 FvH4_1g10540
malus_domestica	MD02G1119500.v1.1 MD02G1119600.v1.1 MD15G1233400.v1.1
prunus_persica	Prupe.7G179500_v2.0.a1
pyrus_communis	pycom02g09310 pycom15g20790
rosa_chinensis	RchiOBHm_Chr2g0097471 RchiOBHm_Chr2g0097571 RchiOBHm_Chr2g0097591
rosa_multiflora	Rmu_co8255597.1_g000001 Rmu_co8464327.1_g000001 Rmu_sc0004220.1_g000005 Rmu_sc0005347.1_g000010 Rmu_sc0027623.1_g000001
rosa_roxburghii	Rroxscaffold_3G00256370
rosa_rugosa	Rorug02G0067500 Rorug02G0067600 Rorug02G0067600
rosa_samantha	Rh2AG113900 Rh2BG116700 Rh2CG118700 Rh2DG117700
rosa_wichuraiana	Rw2G008910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	630, 766
AclI	AACGTT	1 cut(s)	399
AclWI	GGATC	4 cut(s)	461, 669, 938, 1036
AcoI	YGGCCR	1 cut(s)	171
AcuI	CTGAAG	2 cut(s)	527, 1017
AfaI	GTAC	1 cut(s)	408
AfiI	CCNNNNNNNGG	2 cut(s)	220, 779
AgeI	ACCGGT	2 cut(s)	107, 758
AgsI	TTSAA	3 cut(s)	425, 457, 989
AjuI	GAANNNNNNNTTGG	4 cut(s)	208, 240, 1015, 1047
AloI	GAACNNNNNNTCC	2 cut(s)	148, 180
AluBI	AGCT	8 cut(s)	242, 247, 279, 341, 379, 429, 854, 998
AluI	AGCT	8 cut(s)	242, 247, 279, 341, 379, 429, 854, 998
Alw21I	GWGCWC	1 cut(s)	793
Alw26I	GTCTC	8 cut(s)	76, 87, 98, 353, 683, 718, 1007, 1054
AlwI	GGATC	4 cut(s)	461, 669, 938, 1036
AoxI	GGCC	1 cut(s)	171
ApeKI	GCWGC	2 cut(s)	632, 854
AsiGI	ACCGGT	2 cut(s)	107, 758
AspLEI	GCGC	1 cut(s)	839
AsuC2I	CCSGG	3 cut(s)	76, 140, 179
AsuHPI	GGTGA	3 cut(s)	122, 698, 773
BbsI	GAAGAC	1 cut(s)	45
Bbv12I	GWGCWC	1 cut(s)	793
BbvI	GCAGC	2 cut(s)	619, 841
BccI	CCATC	3 cut(s)	92, 777, 955
BceAI	ACGGC	1 cut(s)	31
BcnI	CCSGG	3 cut(s)	76, 140, 179
BcoDI	GTCTC	8 cut(s)	76, 87, 98, 353, 683, 718, 1007, 1054
BfaI	CTAG	4 cut(s)	150, 204, 291, 338
BfmI	CTRYAG	1 cut(s)	524
BfoI	RGCGCY	1 cut(s)	840
BisI	GCNGC	2 cut(s)	633, 855
BlpI	GCTNAGC	1 cut(s)	243
BlsI	GCNGC	2 cut(s)	634, 856
Bme1390I	CCNGG	3 cut(s)	76, 140, 179
BmiI	GGNNCC	2 cut(s)	157, 264
BmrFI	CCNGG	3 cut(s)	76, 140, 179
BmrI	ACTGGG	1 cut(s)	756
BmsI	GCATC	1 cut(s)	958
BmuI	ACTGGG	1 cut(s)	756
BpiI	GAAGAC	1 cut(s)	45
BpmI	CTGGAG	1 cut(s)	861
Bpu1102I	GCTNAGC	1 cut(s)	243
BpuEI	CTTGAG	1 cut(s)	269
BpuMI	CCSGG	3 cut(s)	76, 140, 179
Bsa29I	ATCGAT	1 cut(s)	618
BsaBI	GATNNNNATC	1 cut(s)	624
BsaI	GGTCTC	1 cut(s)	98
BsaJI	CCNNGG	1 cut(s)	168
BsaWI	WCCGGW	2 cut(s)	107, 758
BsaXI	ACNNNNNCTCC	4 cut(s)	792, 822, 834, 864
Bsc4I	CCNNNNNNNGG	2 cut(s)	220, 779
Bse118I	RCCGGY	3 cut(s)	107, 265, 758
Bse1I	ACTGG	2 cut(s)	676, 751
Bse3DI	GCAATG	1 cut(s)	852
Bse8I	GATNNNNATC	1 cut(s)	624
BseCI	ATCGAT	1 cut(s)	618
BseDI	CCNNGG	1 cut(s)	168
BseGI	GGATG	3 cut(s)	625, 769, 883
BseJI	GATNNNNATC	1 cut(s)	624
BseLI	CCNNNNNNNGG	2 cut(s)	220, 779
BseMI	GCAATG	1 cut(s)	852
BseMII	CTCAG	1 cut(s)	389
BseNI	ACTGG	2 cut(s)	676, 751
BseRI	GAGGAG	1 cut(s)	275
BseXI	GCAGC	2 cut(s)	619, 841
Bsh1285I	CGRYCG	1 cut(s)	709
BshFI	GGCC	1 cut(s)	173
BshTI	ACCGGT	2 cut(s)	107, 758
BshVI	ATCGAT	1 cut(s)	618
BsiEI	CGRYCG	1 cut(s)	709
BsiHKAI	GWGCWC	1 cut(s)	793
BsiSI	CCGG	6 cut(s)	76, 108, 140, 179, 266, 759
BslI	CCNNNNNNNGG	2 cut(s)	220, 779
BsmAI	GTCTC	8 cut(s)	76, 87, 98, 353, 683, 718, 1007, 1054
BsmBI	CGTCTC	2 cut(s)	87, 353
BsmI	GAATGC	1 cut(s)	452
BsnI	GGCC	1 cut(s)	173
Bso31I	GGTCTC	1 cut(s)	98
Bsp1286I	GDGCHC	1 cut(s)	793
Bsp143I	GATC	4 cut(s)	466, 661, 943, 1028
Bsp1720I	GCTNAGC	1 cut(s)	243
BspACI	CCGC	2 cut(s)	630, 766
BspANI	GGCC	1 cut(s)	173
BspCNI	CTCAG	1 cut(s)	388
BspDI	ATCGAT	1 cut(s)	618
BspLI	GGNNCC	2 cut(s)	157, 264
BspMAI	CTGCAG	1 cut(s)	528
BspPI	GGATC	4 cut(s)	461, 669, 938, 1036
BspQI	GCTCTTC	1 cut(s)	798
BspTNI	GGTCTC	1 cut(s)	98
BsrDI	GCAATG	1 cut(s)	852
BsrFI	RCCGGY	3 cut(s)	107, 265, 758
BsrI	ACTGG	2 cut(s)	676, 751
BssAI	RCCGGY	3 cut(s)	107, 265, 758
BssECI	CCNNGG	1 cut(s)	168
BssMI	GATC	4 cut(s)	466, 661, 943, 1028
Bst4CI	ACNGT	4 cut(s)	311, 347, 710, 788
Bst6I	CTCTTC	3 cut(s)	63, 252, 798
BstC8I	GCNNGC	2 cut(s)	321, 528
BstDEI	CTNAG	2 cut(s)	243, 375
BstDSI	CCRYGG	1 cut(s)	168
BstEII	GGTNACC	1 cut(s)	761
BstF5I	GGATG	3 cut(s)	625, 769, 883
BstH2I	RGCGCY	1 cut(s)	840
BstHHI	GCGC	1 cut(s)	839
BstKTI	GATC	4 cut(s)	469, 664, 946, 1031
BstMAI	GTCTC	8 cut(s)	76, 87, 98, 353, 683, 718, 1007, 1054
BstMBI	GATC	4 cut(s)	466, 661, 943, 1028
BstMCI	CGRYCG	1 cut(s)	709
BstMWI	GCNNNNNNNGC	3 cut(s)	527, 600, 851
BstNSI	RCATGY	1 cut(s)	807
BstPI	GGTNACC	1 cut(s)	761
BstSCI	CCNGG	3 cut(s)	74, 138, 177
BstSFI	CTRYAG	1 cut(s)	524
BstV1I	GCAGC	2 cut(s)	619, 841
BstV2I	GAAGAC	1 cut(s)	45
BstX2I	RGATCY	3 cut(s)	466, 943, 1028
BstYI	RGATCY	3 cut(s)	466, 943, 1028
Bsu15I	ATCGAT	1 cut(s)	618
BsuRI	GGCC	1 cut(s)	173
BsuTUI	ATCGAT	1 cut(s)	618
BtgI	CCRYGG	1 cut(s)	168
BtsCI	GGATG	3 cut(s)	625, 769, 883
BtsI	GCAGTG	2 cut(s)	521, 584
BtsIMutI	CAGTG	2 cut(s)	521, 584
Cac8I	GCNNGC	2 cut(s)	321, 528
CfoI	GCGC	1 cut(s)	839
Cfr10I	RCCGGY	3 cut(s)	107, 265, 758
ClaI	ATCGAT	1 cut(s)	618
Csp6I	GTAC	1 cut(s)	407
CspAI	ACCGGT	2 cut(s)	107, 758
CviAII	CATG	7 cut(s)	305, 410, 665, 725, 804, 895, 965
CviQI	GTAC	1 cut(s)	407
DdeI	CTNAG	2 cut(s)	243, 375
DpnI	GATC	4 cut(s)	468, 663, 945, 1030
DpnII	GATC	4 cut(s)	466, 661, 943, 1028
EaeI	YGGCCR	1 cut(s)	171
Eam1104I	CTCTTC	3 cut(s)	63, 252, 798
EarI	CTCTTC	3 cut(s)	63, 252, 798
Eco31I	GGTCTC	1 cut(s)	98
Eco57I	CTGAAG	2 cut(s)	527, 1017
Eco91I	GGTNACC	1 cut(s)	761
EcoO65I	GGTNACC	1 cut(s)	761
Esp3I	CGTCTC	2 cut(s)	87, 353
FaeI	CATG	7 cut(s)	308, 413, 668, 728, 807, 898, 968
FalI	AAGNNNNNCTT	2 cut(s)	231, 263
FatI	CATG	7 cut(s)	304, 409, 664, 724, 803, 894, 964
FauI	CCCGC	1 cut(s)	637
Fnu4HI	GCNGC	2 cut(s)	633, 855
FokI	GGATG	3 cut(s)	612, 756, 890
Fsp4HI	GCNGC	2 cut(s)	633, 855
FspBI	CTAG	4 cut(s)	150, 204, 291, 338
GlaI	GCGC	1 cut(s)	838
GluI	GCNGC	2 cut(s)	633, 855
GsuI	CTGGAG	1 cut(s)	861
HaeII	RGCGCY	1 cut(s)	840
HaeIII	GGCC	1 cut(s)	173
HapII	CCGG	6 cut(s)	76, 108, 140, 179, 266, 759
HhaI	GCGC	1 cut(s)	839
Hin1II	CATG	7 cut(s)	308, 413, 668, 728, 807, 898, 968
Hin6I	GCGC	1 cut(s)	837
HinP1I	GCGC	1 cut(s)	837
HindIII	AAGCTT	1 cut(s)	245
HinfI	GANTC	4 cut(s)	22, 224, 433, 615
HpaII	CCGG	6 cut(s)	76, 108, 140, 179, 266, 759
HphI	GGTGA	3 cut(s)	122, 698, 773
Hpy166II	GTNNAC	1 cut(s)	145
Hpy188I	TCNGA	1 cut(s)	507
Hpy188III	TCNNGA	3 cut(s)	26, 127, 440
Hpy8I	GTNNAC	1 cut(s)	145
Hpy99I	CGWCG	1 cut(s)	788
HpyAV	CCTTC	2 cut(s)	502, 894
HpyCH4III	ACNGT	4 cut(s)	311, 347, 710, 788
HpyCH4IV	ACGT	1 cut(s)	399
HpyCH4V	TGCA	7 cut(s)	396, 521, 526, 589, 635, 724, 1050
HpyF10VI	GCNNNNNNNGC	3 cut(s)	527, 600, 851
HpyF3I	CTNAG	2 cut(s)	243, 375
HpySE526I	ACGT	1 cut(s)	399
Hsp92II	CATG	7 cut(s)	308, 413, 668, 728, 807, 898, 968
HspAI	GCGC	1 cut(s)	837
Kzo9I	GATC	4 cut(s)	466, 661, 943, 1028
LguI	GCTCTTC	1 cut(s)	798
LmnI	GCTCC	4 cut(s)	262, 800, 842, 961
Lsp1109I	GCAGC	2 cut(s)	619, 841
LweI	GCATC	1 cut(s)	958
MaeI	CTAG	4 cut(s)	150, 204, 291, 338
MaeII	ACGT	1 cut(s)	399
MaeIII	GTNAC	5 cut(s)	110, 730, 761, 808, 821
MalI	GATC	4 cut(s)	468, 663, 945, 1030
MboI	GATC	4 cut(s)	466, 661, 943, 1028
MboII	GAAGA	8 cut(s)	27, 45, 50, 248, 269, 576, 785, 1023
MflI	RGATCY	3 cut(s)	466, 943, 1028
MhlI	GDGCHC	1 cut(s)	793
MluCI	AATT	4 cut(s)	199, 216, 639, 717
MmeI	TCCRAC	1 cut(s)	639
MnlI	CCTC	8 cut(s)	49, 123, 146, 244, 253, 410, 598, 734
MseI	TTAA	4 cut(s)	162, 828, 872, 1066
MspA1I	CMGCKG	1 cut(s)	632
MspI	CCGG	6 cut(s)	76, 108, 140, 179, 266, 759
MspR9I	CCNGG	3 cut(s)	76, 140, 179
Mva1269I	GAATGC	1 cut(s)	452
MwoI	GCNNNNNNNGC	3 cut(s)	527, 600, 851
NciI	CCSGG	3 cut(s)	76, 140, 179
NdeII	GATC	4 cut(s)	466, 661, 943, 1028
NlaIII	CATG	7 cut(s)	308, 413, 668, 728, 807, 898, 968
NlaIV	GGNNCC	2 cut(s)	157, 264
NmeAIII	GCCGAG	1 cut(s)	620
NmuCI	GTSAC	4 cut(s)	110, 730, 761, 808
NspI	RCATGY	1 cut(s)	807
PciSI	GCTCTTC	1 cut(s)	798
PctI	GAATGC	1 cut(s)	452
PfeI	GAWTC	4 cut(s)	22, 224, 433, 615
PflFI	GACNNNGTC	1 cut(s)	710
PfoI	TCCNGGA	1 cut(s)	74
PinAI	ACCGGT	2 cut(s)	107, 758
PkrI	GCNGC	2 cut(s)	634, 856
Psp1406I	AACGTT	1 cut(s)	399
PspEI	GGTNACC	1 cut(s)	761
PspN4I	GGNNCC	2 cut(s)	157, 264
PstI	CTGCAG	1 cut(s)	528
PsuI	RGATCY	3 cut(s)	466, 943, 1028
PsyI	GACNNNGTC	1 cut(s)	710
RsaI	GTAC	1 cut(s)	408
RsaNI	GTAC	1 cut(s)	407
SapI	GCTCTTC	1 cut(s)	798
SaqAI	TTAA	4 cut(s)	162, 828, 872, 1066
SatI	GCNGC	2 cut(s)	633, 855
Sau3AI	GATC	4 cut(s)	466, 661, 943, 1028
ScrFI	CCNGG	3 cut(s)	76, 140, 179
SduI	GDGCHC	1 cut(s)	793
SfaNI	GCATC	1 cut(s)	958
SfcI	CTRYAG	1 cut(s)	524
SmlI	CTYRAG	1 cut(s)	248
SmoI	CTYRAG	1 cut(s)	248
Sse9I	AATT	4 cut(s)	199, 216, 639, 717
SsiI	CCGC	2 cut(s)	630, 766
SspI	AATATT	1 cut(s)	654
SspMI	CTAG	4 cut(s)	150, 204, 291, 338
StyD4I	CCNGG	3 cut(s)	74, 138, 177
TaaI	ACNGT	4 cut(s)	311, 347, 710, 788
TaiI	ACGT	1 cut(s)	402
TaqI	TCGA	3 cut(s)	126, 431, 618
TasI	AATT	4 cut(s)	199, 216, 639, 717
TfiI	GAWTC	4 cut(s)	22, 224, 433, 615
Tru1I	TTAA	4 cut(s)	162, 828, 872, 1066
Tru9I	TTAA	4 cut(s)	162, 828, 872, 1066
TscAI	CASTG	2 cut(s)	528, 591
TseFI	GTSAC	4 cut(s)	110, 730, 761, 808
TseI	GCWGC	2 cut(s)	632, 854
Tsp45I	GTSAC	4 cut(s)	110, 730, 761, 808
TspDTI	ATGAA	1 cut(s)	614
TspRI	CASTG	2 cut(s)	528, 591
Tth111I	GACNNNGTC	1 cut(s)	710
XceI	RCATGY	1 cut(s)	807
XspI	CTAG	4 cut(s)	150, 204, 291, 338

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.