pycom15g20790

Serine acetyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
14904062 .. 14907311
3250 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g20790.1

Sequence Viewer

Length: 1443 bp
ATGATAAGAATTAATCATCCTATAAATATCACCTTTTCAAATATTCATTTAAACATCATTTACAAAATTTTATCTATAAAACCTACGGACACGTCATATGAACCATCCGTTCACAAAATTCATCAAAAACGCTGGCACCCTCCGCGTGTCTATCTGCTTCTTCTTCCGCCCTTCCCTTTTGCTTCCCGTCCACGACAATTTCACGCCAAAATAATCCAAAAGATTATAAAAAAACATCGATGCGCAGCAGTTTCATCCCCACTACTTCCCACCACGCCACAACACTCCGCCACACACACAAAACACCGCCTTTACTCTCTCTCTCCTCACTTTCTCTCTATACCCACTCTGTTTTTCCATGAGGGGTTCGCATTCGATCCCTTCCTAAAAGCTCCCTCTTCCTTTCTTTCATTCTCTCTCATGGCTTGCGTGAGCGATGAGAGCTGGGTCGCCCTCCCCAAAATGCTCTCCGACCGCCTCTCTCTACCGGAAGACGACCGCCGCGACGACGACGATGACGACGACGACGACCAACCCGGGTTTTTCCCGTCCGAGTCCACCGCGTACAGGTTAGAGAAGGTTTTTCCGGTCTACGCATTGGGGATTCCGAAACCCGAGTCCGACCCGGTTGGACTTGCTTCCGTTTCGGGCGACCCGATTTGGGATGCCGTCCGGGAAGAGGCCAAGTTGGAGGCGGAAAAGGAGCCAATTTTGAGTAGCTTCTTGTATGCCAGCATCTTGGCACATGATTGCTTAGAGCACGCGTTGGGGTTTGTTCTCGCCAACAGACTGCAAAACCCGACACTTTTGGCAACTCAACTGATGGATATATTTTATGATGTGATGCTGCATGATAGAGATATTCAGCGATCCGTTCGCTTGGATGTGCAGGCATTTAAAGACCGTGATCCGGCCTGCTTGTCGTATTGTTCAGCCCTATTGTATCTTAAGGGCTACCATTCTTTGCAAGTACATCGAGTAGCTCATTCATTGTGGAATCAAGGACGAAAAGTATTGGCCTTGGCGTTACAAAGCCGAATTAGCGAGGTCTTTGGAGTGGACATTCACCCAGCTGCAAAAATTGGAGAGGGAATACTGTTGGATCATGGTACTGGTGTGGTTATTGGCGAAACTGCTGTTGTAGGAAACAAAGTATCACTGATGCACGGTGTGACTTTGGGGGGAACTGGGAAGGGAATTGGTGATCGACATCCAAAAGTAGGTGACGGTGCACTAATTGGAGCCAGTGTAACTGTACTTGGGAATATCAAAATAGGTCGAGGAGCAATGATAGCTGCTGGTTCCCTTGTGCTGAAAGATGTCCCTCCACACAGCATGGTGGCGGGAATACCAGCAAAGGTCATTGGATATGTAGACGAAATAGATCCTTCGTTAACAATGAAGCATGATGCTACCAAAGATTTTTTCGAAAATGTAGCGTGA

Protein Analysis

481

Amino Acids

53.02

Weight (kDa)

6.66

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SATase_N PF06426 220 - 323 4.6e-37 Serine acetyltransferase, N-terminal
Hexapep PF00132 404 - 437 4.5e-08 Bacterial transferase hexapeptide (six repeats)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 227
Acc16I TGCGCA 1 cut(s) 244
AccB1I GGYRCC 1 cut(s) 135
AccI GTMKAC 2 cut(s) 591, 1374
AccII CGCG 4 cut(s) 145, 504, 563, 764
AclWI GGATC 5 cut(s) 371, 864, 902, 1110, 1379
AcsI RAATTY 2 cut(s) 66, 117
AdeI CACNNNGTG 1 cut(s) 1171
AfaI GTAC 4 cut(s) 566, 972, 1111, 1257
AfiI CCNNNNNNNGG 5 cut(s) 567, 661, 679, 910, 1220
AflII CTTAAG 1 cut(s) 947
AflIII ACRYGT 2 cut(s) 90, 762
AgsI TTSAA 1 cut(s) 39
AjiI CACGTC 1 cut(s) 93
AjuI GAANNNNNNNTTGG 2 cut(s) 1409, 1441
AluBI AGCT 6 cut(s) 392, 444, 720, 983, 1073, 1295
AluI AGCT 6 cut(s) 392, 444, 720, 983, 1073, 1295
Alw21I GWGCWC 2 cut(s) 762, 1234
Alw44I GTGCAC 1 cut(s) 1230
AlwI GGATC 5 cut(s) 371, 864, 902, 1110, 1379
Ama87I CYCGRG 2 cut(s) 536, 614
AoxI GGCC 3 cut(s) 681, 912, 1017
ApaLI GTGCAC 1 cut(s) 1230
ApeKI GCWGC 4 cut(s) 245, 847, 1073, 1295
ApoI RAATTY 2 cut(s) 66, 117
ArsI GACNNNNNNTTYG 2 cut(s) 602, 634
AseI ATTAAT 1 cut(s) 12
AspLEI GCGC 1 cut(s) 245
AsuC2I CCSGG 4 cut(s) 537, 538, 626, 674
AsuHPI GGTGA 4 cut(s) 22, 1058, 1214, 1235
AsuII TTCGAA 1 cut(s) 1428
AvaI CYCGRG 2 cut(s) 536, 614
BaeGI GKGCMC 1 cut(s) 1234
BaeI ACNNNNGTAYC 2 cut(s) 1101, 1134
BanI GGYRCC 1 cut(s) 135
BbsI GAAGAC 1 cut(s) 498
Bbv12I GWGCWC 2 cut(s) 762, 1234
BbvI GCAGC 4 cut(s) 257, 834, 1060, 1282
BccI CCATC 2 cut(s) 112, 817
BceAI ACGGC 1 cut(s) 653
BcgI CGANNNNNNTGC 2 cut(s) 956, 990
BcnI CCSGG 4 cut(s) 537, 538, 626, 674
BfrI CTTAAG 1 cut(s) 947
BisI GCNGC 5 cut(s) 246, 502, 848, 1074, 1296
BlsI GCNGC 5 cut(s) 247, 503, 849, 1075, 1297
Bme1390I CCNGG 4 cut(s) 537, 538, 626, 674
BmeT110I CYCGRG 2 cut(s) 536, 614
BmgBI CACGTC 1 cut(s) 93
BmiI GGNNCC 4 cut(s) 137, 705, 1243, 1303
BmrFI CCNGG 4 cut(s) 537, 538, 626, 674
BmrI ACTGGG 1 cut(s) 1197
BmsI GCATC 6 cut(s) 230, 655, 744, 834, 1152, 1399
BmuI ACTGGG 1 cut(s) 1197
BpiI GAAGAC 1 cut(s) 498
Bpu14I TTCGAA 1 cut(s) 1428
BpuMI CCSGG 4 cut(s) 537, 538, 626, 674
Bsa29I ATCGAT 1 cut(s) 238
BsaBI GATNNNNATC 1 cut(s) 1209
BsaJI CCNNGG 2 cut(s) 536, 1020
BsaWI WCCGGW 2 cut(s) 487, 586
BsaXI ACNNNNNCTCC 2 cut(s) 1233, 1263
Bsc4I CCNNNNNNNGG 5 cut(s) 567, 661, 679, 910, 1220
Bse1I ACTGG 3 cut(s) 1117, 1192, 1245
Bse3DI GCAATG 1 cut(s) 1293
Bse8I GATNNNNATC 1 cut(s) 1209
BseCI ATCGAT 1 cut(s) 238
BseDI CCNNGG 2 cut(s) 536, 1020
BseGI GGATG 6 cut(s) 16, 104, 254, 670, 889, 1210
BseJI GATNNNNATC 1 cut(s) 1209
BseLI CCNNNNNNNGG 5 cut(s) 567, 661, 679, 910, 1220
BseMI GCAATG 1 cut(s) 1293
BseNI ACTGG 3 cut(s) 1117, 1192, 1245
BseRI GAGGAG 2 cut(s) 315, 1296
BseSI GKGCMC 1 cut(s) 1234
BseXI GCAGC 4 cut(s) 257, 834, 1060, 1282
BseYI CCCAGC 2 cut(s) 444, 1069
BsgI GTGCAG 1 cut(s) 908
Bsh1236I CGCG 4 cut(s) 145, 504, 563, 764
Bsh1285I CGRYCG 2 cut(s) 475, 499
BshFI GGCC 3 cut(s) 683, 914, 1019
BshNI GGYRCC 1 cut(s) 135
BshVI ATCGAT 1 cut(s) 238
BsiEI CGRYCG 2 cut(s) 475, 499
BsiHKAI GWGCWC 2 cut(s) 762, 1234
BsiHKCI CYCGRG 2 cut(s) 536, 614
BsiSI CCGG 6 cut(s) 488, 537, 587, 626, 673, 911
BslFI GGGAC 1 cut(s) 1307
BslI CCNNNNNNNGG 5 cut(s) 567, 661, 679, 910, 1220
BsmFI GGGAC 1 cut(s) 1307
BsmI GAATGC 1 cut(s) 371
BsnI GGCC 3 cut(s) 683, 914, 1019
BsoBI CYCGRG 2 cut(s) 536, 614
Bsp119I TTCGAA 1 cut(s) 1428
Bsp1286I GDGCHC 2 cut(s) 762, 1234
Bsp143I GATC 6 cut(s) 376, 869, 907, 1102, 1204, 1384
BspANI GGCC 3 cut(s) 683, 914, 1019
BspDI ATCGAT 1 cut(s) 238
BspFNI CGCG 4 cut(s) 145, 504, 563, 764
BspLI GGNNCC 4 cut(s) 137, 705, 1243, 1303
BspPI GGATC 5 cut(s) 371, 864, 902, 1110, 1379
BspT104I TTCGAA 1 cut(s) 1428
BspT107I GGYRCC 1 cut(s) 135
BspTI CTTAAG 1 cut(s) 947
BsrDI GCAATG 1 cut(s) 1293
BsrI ACTGG 3 cut(s) 1117, 1192, 1245
BssECI CCNNGG 2 cut(s) 536, 1020
BssMI GATC 6 cut(s) 376, 869, 907, 1102, 1204, 1384
BssT1I CCWWGG 1 cut(s) 1020
Bst4CI ACNGT 5 cut(s) 905, 1098, 1169, 1229, 1255
Bst6I CTCTTC 2 cut(s) 403, 672
BstAFI CTTAAG 1 cut(s) 947
BstBI TTCGAA 1 cut(s) 1428
BstC8I GCNNGC 6 cut(s) 134, 427, 733, 762, 891, 916
BstDEI CTNAG 1 cut(s) 754
BstF5I GGATG 6 cut(s) 16, 104, 254, 670, 889, 1210
BstFNI CGCG 4 cut(s) 145, 504, 563, 764
BstHHI GCGC 1 cut(s) 245
BstKTI GATC 6 cut(s) 379, 872, 910, 1105, 1207, 1387
BstMBI GATC 6 cut(s) 376, 869, 907, 1102, 1204, 1384
BstMCI CGRYCG 2 cut(s) 475, 499
BstMWI GCNNNNNNNGC 4 cut(s) 142, 441, 1041, 1292
BstSCI CCNGG 4 cut(s) 535, 536, 624, 672
BstSLI GKGCMC 1 cut(s) 1234
BstUI CGCG 4 cut(s) 145, 504, 563, 764
BstV1I GCAGC 4 cut(s) 257, 834, 1060, 1282
BstV2I GAAGAC 1 cut(s) 498
BstX2I RGATCY 1 cut(s) 1384
BstXI CCANNNNNNTGG 1 cut(s) 739
BstYI RGATCY 1 cut(s) 1384
Bsu15I ATCGAT 1 cut(s) 238
BsuRI GGCC 3 cut(s) 683, 914, 1019
BsuTUI ATCGAT 1 cut(s) 238
BtgZI GCGATG 1 cut(s) 450
BtrI CACGTC 1 cut(s) 93
BtsCI GGATG 6 cut(s) 16, 104, 254, 670, 889, 1210
BtsIMutI CAGTG 2 cut(s) 1157, 1252
Cac8I GCNNGC 6 cut(s) 134, 427, 733, 762, 891, 916
CfoI GCGC 1 cut(s) 245
Cfr9I CCCGGG 1 cut(s) 536
ClaI ATCGAT 1 cut(s) 238
Csp6I GTAC 4 cut(s) 565, 971, 1110, 1256
CviAII CATG 7 cut(s) 359, 421, 746, 851, 1106, 1336, 1406
CviQI GTAC 4 cut(s) 565, 971, 1110, 1256
DdeI CTNAG 1 cut(s) 754
DpnI GATC 6 cut(s) 378, 871, 909, 1104, 1206, 1386
DpnII GATC 6 cut(s) 376, 869, 907, 1102, 1204, 1384
DraI TTTAAA 2 cut(s) 51, 898
DraIII CACNNNGTG 1 cut(s) 1171
Eam1104I CTCTTC 2 cut(s) 403, 672
EarI CTCTTC 2 cut(s) 403, 672
EciI GGCGGA 3 cut(s) 156, 277, 710
Eco130I CCWWGG 1 cut(s) 1020
Eco88I CYCGRG 2 cut(s) 536, 614
EcoT14I CCWWGG 1 cut(s) 1020
ErhI CCWWGG 1 cut(s) 1020
FaeI CATG 7 cut(s) 362, 424, 749, 854, 1109, 1339, 1409
FaqI GGGAC 1 cut(s) 1307
FatI CATG 7 cut(s) 358, 420, 745, 850, 1105, 1335, 1405
FauI CCCGC 1 cut(s) 1336
FauNDI CATATG 1 cut(s) 97
FblI GTMKAC 2 cut(s) 591, 1374
Fnu4HI GCNGC 5 cut(s) 246, 502, 848, 1074, 1296
FokI GGATG 6 cut(s) 3, 91, 241, 677, 896, 1197
Fsp4HI GCNGC 5 cut(s) 246, 502, 848, 1074, 1296
FspI TGCGCA 1 cut(s) 244
GlaI GCGC 1 cut(s) 244
GluI GCNGC 5 cut(s) 246, 502, 848, 1074, 1296
GsaI CCCAGC 2 cut(s) 448, 1073
HaeIII GGCC 3 cut(s) 683, 914, 1019
HapII CCGG 6 cut(s) 488, 537, 587, 626, 673, 911
HhaI GCGC 1 cut(s) 245
Hin1II CATG 7 cut(s) 362, 424, 749, 854, 1109, 1339, 1409
Hin6I GCGC 1 cut(s) 243
HinP1I GCGC 1 cut(s) 243
HincII GTYRAC 1 cut(s) 1395
HindII GTYRAC 1 cut(s) 1395
HinfI GANTC 4 cut(s) 554, 604, 617, 997
HpaI GTTAAC 1 cut(s) 1395
HpaII CCGG 6 cut(s) 488, 537, 587, 626, 673, 911
HphI GGTGA 4 cut(s) 22, 1058, 1214, 1235
Hpy166II GTNNAC 8 cut(s) 112, 191, 558, 592, 1060, 1232, 1375, 1395
Hpy188I TCNGA 4 cut(s) 472, 553, 609, 622
Hpy8I GTNNAC 8 cut(s) 112, 191, 558, 592, 1060, 1232, 1375, 1395
Hpy99I CGWCG 6 cut(s) 509, 512, 515, 524, 527, 530
HpyAV CCTTC 5 cut(s) 181, 391, 571, 1186, 1398
HpyCH4III ACNGT 5 cut(s) 905, 1098, 1169, 1229, 1255
HpyCH4IV ACGT 1 cut(s) 92
HpyCH4V TGCA 7 cut(s) 793, 850, 889, 967, 1076, 1165, 1232
HpyF10VI GCNNNNNNNGC 4 cut(s) 142, 441, 1041, 1292
HpyF3I CTNAG 1 cut(s) 754
HpySE526I ACGT 1 cut(s) 92
Hsp92II CATG 7 cut(s) 362, 424, 749, 854, 1109, 1339, 1409
HspAI GCGC 1 cut(s) 243
KspAI GTTAAC 1 cut(s) 1395
Kzo9I GATC 6 cut(s) 376, 869, 907, 1102, 1204, 1384
LmnI GCTCC 4 cut(s) 397, 703, 1241, 1283
Lsp1109I GCAGC 4 cut(s) 257, 834, 1060, 1282
LweI GCATC 6 cut(s) 230, 655, 744, 834, 1152, 1399
MaeII ACGT 1 cut(s) 92
MaeIII GTNAC 4 cut(s) 1026, 1171, 1223, 1249
MalI GATC 6 cut(s) 378, 871, 909, 1104, 1206, 1386
MboI GATC 6 cut(s) 376, 869, 907, 1102, 1204, 1384
MboII GAAGA 5 cut(s) 152, 155, 390, 503, 689
MflI RGATCY 1 cut(s) 1384
MhlI GDGCHC 2 cut(s) 762, 1234
MluCI AATT 9 cut(s) 9, 66, 117, 197, 708, 1038, 1080, 1197, 1236
MluI ACGCGT 1 cut(s) 762
MlyI GAGTC 2 cut(s) 563, 626
MmeI TCCRAC 5 cut(s) 495, 610, 645, 669, 1080
MseI TTAA 5 cut(s) 12, 50, 897, 948, 1394
MspA1I CMGCKG 1 cut(s) 1073
MspCI CTTAAG 1 cut(s) 947
MspI CCGG 6 cut(s) 488, 537, 587, 626, 673, 911
MspR9I CCNGG 4 cut(s) 537, 538, 626, 674
Mva1269I GAATGC 1 cut(s) 371
MvnI CGCG 4 cut(s) 145, 504, 563, 764
MwoI GCNNNNNNNGC 4 cut(s) 142, 441, 1041, 1292
NciI CCSGG 4 cut(s) 537, 538, 626, 674
NdeI CATATG 1 cut(s) 97
NdeII GATC 6 cut(s) 376, 869, 907, 1102, 1204, 1384
NlaIII CATG 7 cut(s) 362, 424, 749, 854, 1109, 1339, 1409
NlaIV GGNNCC 4 cut(s) 137, 705, 1243, 1303
NmuCI GTSAC 2 cut(s) 1171, 1223
NsbI TGCGCA 1 cut(s) 244
NspV TTCGAA 1 cut(s) 1428
PcsI WCGNNNNNNNCGW 5 cut(s) 501, 516, 519, 525, 653
PctI GAATGC 1 cut(s) 371
PfeI GAWTC 2 cut(s) 604, 997
PfoI TCCNGGA 1 cut(s) 672
PkrI GCNGC 5 cut(s) 247, 503, 849, 1075, 1297
PleI GAGTC 2 cut(s) 562, 625
PpsI GAGTC 2 cut(s) 562, 625
PshBI ATTAAT 1 cut(s) 12
PsiI TTATAA 1 cut(s) 227
PspFI CCCAGC 2 cut(s) 444, 1069
PspN4I GGNNCC 4 cut(s) 137, 705, 1243, 1303
PsuI RGATCY 1 cut(s) 1384
PvuII CAGCTG 1 cut(s) 1073
RsaI GTAC 4 cut(s) 566, 972, 1111, 1257
RsaNI GTAC 4 cut(s) 565, 971, 1110, 1256
SaqAI TTAA 5 cut(s) 12, 50, 897, 948, 1394
SatI GCNGC 5 cut(s) 246, 502, 848, 1074, 1296
Sau3AI GATC 6 cut(s) 376, 869, 907, 1102, 1204, 1384
SchI GAGTC 2 cut(s) 563, 626
ScrFI CCNGG 4 cut(s) 537, 538, 626, 674
SduI GDGCHC 2 cut(s) 762, 1234
SfaNI GCATC 6 cut(s) 230, 655, 744, 834, 1152, 1399
SfuI TTCGAA 1 cut(s) 1428
SmaI CCCGGG 1 cut(s) 538
SmlI CTYRAG 1 cut(s) 947
SmoI CTYRAG 1 cut(s) 947
Sse9I AATT 9 cut(s) 9, 66, 117, 197, 708, 1038, 1080, 1197, 1236
SspI AATATT 1 cut(s) 43
StyD4I CCNGG 4 cut(s) 535, 536, 624, 672
StyI CCWWGG 1 cut(s) 1020
TaaI ACNGT 5 cut(s) 905, 1098, 1169, 1229, 1255
TaiI ACGT 1 cut(s) 95
TaqI TCGA 6 cut(s) 238, 375, 976, 1207, 1279, 1428
TasI AATT 9 cut(s) 9, 66, 117, 197, 708, 1038, 1080, 1197, 1236
TatI WGTACW 2 cut(s) 970, 1255
TauI GCSGC 1 cut(s) 504
TfiI GAWTC 2 cut(s) 604, 997
Tru1I TTAA 5 cut(s) 12, 50, 897, 948, 1394
Tru9I TTAA 5 cut(s) 12, 50, 897, 948, 1394
TscAI CASTG 2 cut(s) 1164, 1252
TseFI GTSAC 2 cut(s) 1171, 1223
TseI GCWGC 4 cut(s) 245, 847, 1073, 1295
Tsp45I GTSAC 2 cut(s) 1171, 1223
TspDTI ATGAA 7 cut(s) 35, 110, 114, 243, 399, 978, 1415
TspGWI ACGGA 4 cut(s) 97, 101, 631, 862
TspMI CCCGGG 1 cut(s) 536
TspRI CASTG 2 cut(s) 1164, 1252
Vha464I CTTAAG 1 cut(s) 947
VneI GTGCAC 1 cut(s) 1230
VspI ATTAAT 1 cut(s) 12
XapI RAATTY 2 cut(s) 66, 117
XmaI CCCGGG 1 cut(s) 536
XmiI GTMKAC 2 cut(s) 591, 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.