Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0005234

Physical Location & Seq

Genomic Coordinates Forward (+)

17637752 .. 17640363

Gene Structure 2612 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G179500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1035 bp

ATGGCCTGCGTCAGTGATGAGAGCTGGGTCGCGCTCCCCAAAATGCTCTCGGAACGCTTGGCTCTGAGACAAGAAGACCGCCACGACGACGAGCAGCCCAGCTTTTTCGGGTCCGAGTCCACCGCGCACCGGTTAGAGAAGGTTTTTCCTGTGTACGCATTGGGGATTCCGAAACCCGACTCCGACCCGGTTAAGCCGGCTTCGGTTTCGGGCGACCCGATATGGGATGCCGTCAGGGAAGAGGCCAAGTTGGAGGCAGAAAAGGAGCCAATTTTGAGTAGCTTCTTGTACGCGAGCATCTTGGCGCATGATTGTTTAGAGCAGGCGTTGGGCTTTGTTCTTGCCAATAGACTGCAAAACCCGACTCTTTTGGCAACCCAGCTGATGGATATATTTTATGATGTGATGATGCATGACAGAGATATTCAACGTTCTGTTCGCTTAGACGTGCAGGCATTTAAAGACCGTGATCCAGCTTGCTTGTCTTATTGTTCTGCCCTATTGTATCTTAAGGGTTACCATTCTTTGCAAGTGCATCGAGTAGCTCATTCCTTGTGGAGTCAAGGACGCAAGGTTTTGGCCTTGGCATTACAAAGCCGAATTAGTGAGGTCTTTGGAGTGGACATTCACCCAGCTGCAAAAATTGGAGAGGGAATACTGCTGGATCATGGTACAGGTGTGGTTATTGGTGAAACTGCTGTTGTAGGAAACAGAGTTTCATTGATGCATGGTGTAACTTTGGGGGGAACTGGGAAGGAAATTGGTGATCGTCACCCAAAAGTAGGTGATGGTGCACTAATTGGAGCCAGTGCAACAATACTCGGGAATATAAAAATAGGTCAAGGAGCAATGATAGCTGCTGGTTCCCTTGTGTTGAAAAATGTCCCTCCACGCAGCATGGTGGCAGGAATACCAGCAAAGGTGATTGGATATGTAGATGAAAAAGATCCTTCGTTAACAATGAAGCATGATGCCTCCAAAGAGTTTTTCGAACATGTAGCTGTTCAGTGTAGAGATACAAGATCTGCTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0000103 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006534 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008374 GO:0008652 GO:0009001 GO:0009058 GO:0009069 GO:0009070 GO:0009987 GO:0016053 GO:0016407 GO:0016412 GO:0016413 GO:0016740 GO:0016746 GO:0016747 GO:0019344 GO:0019752 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko00920 ko01100 ko01110 ko01120 ko01200 ko01230 ko05111 map00270 map00920 map01100 map01110 map01120 map01200 map01230 map05111

Pfam Domains

Protein Families

Hexapep SATase_N

Protein Analysis

345

Amino Acids

37.34

Weight (kDa)

6.0

Isoelectric Point (pI)

38.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005234)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17640 AT4G35640
fragaria_vesca	FvH4_1g10540 FvH4_1g10540 FvH4_1g10540 FvH4_1g10540
malus_domestica	MD02G1119500.v1.1 MD02G1119600.v1.1 MD15G1233400.v1.1
prunus_persica	Prupe.7G179500_v2.0.a1
pyrus_communis	pycom02g09310 pycom15g20790
rosa_chinensis	RchiOBHm_Chr2g0097471 RchiOBHm_Chr2g0097571 RchiOBHm_Chr2g0097591
rosa_multiflora	Rmu_co8255597.1_g000001 Rmu_co8464327.1_g000001 Rmu_sc0004220.1_g000005 Rmu_sc0005347.1_g000010 Rmu_sc0027623.1_g000001
rosa_roxburghii	Rroxscaffold_3G00256370
rosa_rugosa	Rorug02G0067500 Rorug02G0067600 Rorug02G0067600
rosa_samantha	Rh2AG113900 Rh2BG116700 Rh2CG118700 Rh2DG117700
rosa_wichuraiana	Rw2G008910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	385
AccII	CGCG	3 cut(s)	32, 125, 293
AciI	CCGC	2 cut(s)	79, 123
AclI	AACGTT	1 cut(s)	430
AclWI	GGATC	3 cut(s)	464, 672, 941
AfaI	GTAC	3 cut(s)	155, 290, 673
AfiI	CCNNNNNNNGG	4 cut(s)	129, 223, 385, 782
AflII	CTTAAG	1 cut(s)	509
AflIII	ACRYGT	1 cut(s)	994
AgeI	ACCGGT	1 cut(s)	129
AgsI	TTSAA	2 cut(s)	428, 877
AjiI	CACGTC	1 cut(s)	448
AjuI	GAANNNNNNNTTGG	2 cut(s)	971, 1003
AluBI	AGCT	9 cut(s)	24, 102, 282, 382, 476, 545, 635, 857, 1001
AluI	AGCT	9 cut(s)	24, 102, 282, 382, 476, 545, 635, 857, 1001
Alw21I	GWGCWC	1 cut(s)	796
Alw26I	GTCTC	1 cut(s)	61
Alw44I	GTGCAC	1 cut(s)	792
AlwI	GGATC	3 cut(s)	464, 672, 941
Ama87I	CYCGRG	1 cut(s)	821
AoxI	GGCC	3 cut(s)	3, 243, 579
ApaLI	GTGCAC	1 cut(s)	792
ApeKI	GCWGC	4 cut(s)	94, 635, 857, 894
AsiGI	ACCGGT	1 cut(s)	129
AspLEI	GCGC	3 cut(s)	34, 127, 307
AspS9I	GGNCC	1 cut(s)	111
AsuC2I	CCSGG	1 cut(s)	188
AsuHPI	GGTGA	6 cut(s)	620, 701, 764, 776, 797, 934
AsuII	TTCGAA	1 cut(s)	990
AvaI	CYCGRG	1 cut(s)	821
AvaII	GGWCC	1 cut(s)	111
BaeGI	GKGCMC	1 cut(s)	796
BaeI	ACNNNNGTAYC	2 cut(s)	663, 696
BbsI	GAAGAC	1 cut(s)	81
Bbv12I	GWGCWC	1 cut(s)	796
BbvI	GCAGC	4 cut(s)	106, 622, 844, 906
BccI	CCATC	2 cut(s)	379, 782
BceAI	ACGGC	1 cut(s)	215
BcgI	CGANNNNNNTGC	2 cut(s)	518, 552
BcnI	CCSGG	1 cut(s)	188
BcoDI	GTCTC	1 cut(s)	61
BfrI	CTTAAG	1 cut(s)	509
BglII	AGATCT	1 cut(s)	1022
BisI	GCNGC	4 cut(s)	95, 636, 858, 895
BlsI	GCNGC	4 cut(s)	96, 637, 859, 896
Bme1390I	CCNGG	1 cut(s)	188
Bme18I	GGWCC	1 cut(s)	111
BmeT110I	CYCGRG	1 cut(s)	821
BmgBI	CACGTC	1 cut(s)	448
BmgT120I	GGNCC	1 cut(s)	111
BmiI	GGNNCC	4 cut(s)	112, 267, 805, 865
BmrFI	CCNGG	1 cut(s)	188
BmrI	ACTGGG	1 cut(s)	759
BmsI	GCATC	6 cut(s)	217, 306, 399, 544, 714, 961
BmuI	ACTGGG	1 cut(s)	759
BpiI	GAAGAC	1 cut(s)	81
Bpu14I	TTCGAA	1 cut(s)	990
BpuMI	CCSGG	1 cut(s)	188
BsaJI	CCNNGG	1 cut(s)	582
BsaWI	WCCGGW	1 cut(s)	129
Bsc4I	CCNNNNNNNGG	4 cut(s)	129, 223, 385, 782
Bse118I	RCCGGY	2 cut(s)	129, 196
Bse1I	ACTGG	2 cut(s)	754, 807
Bse3DI	GCAATG	1 cut(s)	855
BseDI	CCNNGG	1 cut(s)	582
BseGI	GGATG	1 cut(s)	232
BseLI	CCNNNNNNNGG	4 cut(s)	129, 223, 385, 782
BseMI	GCAATG	1 cut(s)	855
BseMII	CTCAG	1 cut(s)	56
BseNI	ACTGG	2 cut(s)	754, 807
BseSI	GKGCMC	1 cut(s)	796
BseXI	GCAGC	4 cut(s)	106, 622, 844, 906
BseYI	CCCAGC	4 cut(s)	24, 98, 378, 631
BsgI	GTGCAG	1 cut(s)	470
Bsh1236I	CGCG	3 cut(s)	32, 125, 293
BshFI	GGCC	3 cut(s)	5, 245, 581
BshTI	ACCGGT	1 cut(s)	129
BsiHKAI	GWGCWC	1 cut(s)	796
BsiHKCI	CYCGRG	1 cut(s)	821
BsiSI	CCGG	3 cut(s)	130, 188, 197
BslFI	GGGAC	1 cut(s)	869
BslI	CCNNNNNNNGG	4 cut(s)	129, 223, 385, 782
BsmAI	GTCTC	1 cut(s)	61
BsmFI	GGGAC	1 cut(s)	869
BsnI	GGCC	3 cut(s)	5, 245, 581
BsoBI	CYCGRG	1 cut(s)	821
Bsp119I	TTCGAA	1 cut(s)	990
Bsp1286I	GDGCHC	1 cut(s)	796
Bsp143I	GATC	5 cut(s)	469, 664, 766, 946, 1022
BspACI	CCGC	2 cut(s)	79, 123
BspANI	GGCC	3 cut(s)	5, 245, 581
BspCNI	CTCAG	1 cut(s)	57
BspFNI	CGCG	3 cut(s)	32, 125, 293
BspLI	GGNNCC	4 cut(s)	112, 267, 805, 865
BspPI	GGATC	3 cut(s)	464, 672, 941
BspT104I	TTCGAA	1 cut(s)	990
BspTI	CTTAAG	1 cut(s)	509
BsrDI	GCAATG	1 cut(s)	855
BsrFI	RCCGGY	2 cut(s)	129, 196
BsrI	ACTGG	2 cut(s)	754, 807
BssAI	RCCGGY	2 cut(s)	129, 196
BssECI	CCNNGG	1 cut(s)	582
BssMI	GATC	5 cut(s)	469, 664, 766, 946, 1022
BssT1I	CCWWGG	1 cut(s)	582
Bst4CI	ACNGT	1 cut(s)	467
Bst6I	CTCTTC	1 cut(s)	234
BstAFI	CTTAAG	1 cut(s)	509
BstBI	TTCGAA	1 cut(s)	990
BstC8I	GCNNGC	6 cut(s)	7, 198, 295, 324, 453, 478
BstDEI	CTNAG	2 cut(s)	65, 442
BstEII	GGTNACC	1 cut(s)	515
BstF5I	GGATG	1 cut(s)	232
BstFNI	CGCG	3 cut(s)	32, 125, 293
BstHHI	GCGC	3 cut(s)	34, 127, 307
BstKTI	GATC	5 cut(s)	472, 667, 769, 949, 1025
BstMAI	GTCTC	1 cut(s)	61
BstMBI	GATC	5 cut(s)	469, 664, 766, 946, 1022
BstMWI	GCNNNNNNNGC	1 cut(s)	854
BstNSI	RCATGY	1 cut(s)	998
BstPI	GGTNACC	1 cut(s)	515
BstSCI	CCNGG	1 cut(s)	186
BstSLI	GKGCMC	1 cut(s)	796
BstUI	CGCG	3 cut(s)	32, 125, 293
BstV1I	GCAGC	4 cut(s)	106, 622, 844, 906
BstV2I	GAAGAC	1 cut(s)	81
BstX2I	RGATCY	2 cut(s)	946, 1022
BstYI	RGATCY	2 cut(s)	946, 1022
BsuRI	GGCC	3 cut(s)	5, 245, 581
BtrI	CACGTC	1 cut(s)	448
BtsCI	GGATG	1 cut(s)	232
BtsIMutI	CAGTG	3 cut(s)	19, 814, 1013
Cac8I	GCNNGC	6 cut(s)	7, 198, 295, 324, 453, 478
CfoI	GCGC	3 cut(s)	34, 127, 307
Cfr10I	RCCGGY	2 cut(s)	129, 196
Cfr13I	GGNCC	1 cut(s)	111
CseI	GACGC	1 cut(s)	576
Csp6I	GTAC	3 cut(s)	154, 289, 672
CspAI	ACCGGT	1 cut(s)	129
CviAII	CATG	7 cut(s)	308, 413, 668, 728, 898, 968, 995
CviQI	GTAC	3 cut(s)	154, 289, 672
DdeI	CTNAG	2 cut(s)	65, 442
DpnI	GATC	5 cut(s)	471, 666, 768, 948, 1024
DpnII	GATC	5 cut(s)	469, 664, 766, 946, 1022
DraI	TTTAAA	1 cut(s)	460
Eam1104I	CTCTTC	1 cut(s)	234
EarI	CTCTTC	1 cut(s)	234
Eco130I	CCWWGG	1 cut(s)	582
Eco47I	GGWCC	1 cut(s)	111
Eco88I	CYCGRG	1 cut(s)	821
Eco91I	GGTNACC	1 cut(s)	515
EcoO65I	GGTNACC	1 cut(s)	515
EcoT14I	CCWWGG	1 cut(s)	582
EcoT22I	ATGCAT	2 cut(s)	414, 729
ErhI	CCWWGG	1 cut(s)	582
FaeI	CATG	7 cut(s)	311, 416, 671, 731, 901, 971, 998
FaqI	GGGAC	1 cut(s)	869
FatI	CATG	7 cut(s)	307, 412, 667, 727, 897, 967, 994
Fnu4HI	GCNGC	4 cut(s)	95, 636, 858, 895
FokI	GGATG	1 cut(s)	239
Fsp4HI	GCNGC	4 cut(s)	95, 636, 858, 895
GlaI	GCGC	3 cut(s)	33, 126, 306
GluI	GCNGC	4 cut(s)	95, 636, 858, 895
GsaI	CCCAGC	4 cut(s)	28, 102, 382, 635
HaeIII	GGCC	3 cut(s)	5, 245, 581
HapII	CCGG	3 cut(s)	130, 188, 197
HgaI	GACGC	1 cut(s)	576
HhaI	GCGC	3 cut(s)	34, 127, 307
Hin1II	CATG	7 cut(s)	311, 416, 671, 731, 901, 971, 998
Hin6I	GCGC	3 cut(s)	32, 125, 305
HinP1I	GCGC	3 cut(s)	32, 125, 305
HincII	GTYRAC	1 cut(s)	957
HindII	GTYRAC	1 cut(s)	957
HinfI	GANTC	5 cut(s)	116, 166, 179, 364, 559
HpaI	GTTAAC	1 cut(s)	957
HpaII	CCGG	3 cut(s)	130, 188, 197
HphI	GGTGA	6 cut(s)	620, 701, 764, 776, 797, 934
Hpy166II	GTNNAC	5 cut(s)	120, 154, 622, 794, 957
Hpy188I	TCNGA	5 cut(s)	52, 66, 115, 171, 184
Hpy188III	TCNNGA	1 cut(s)	823
Hpy8I	GTNNAC	5 cut(s)	120, 154, 622, 794, 957
Hpy99I	CGWCG	2 cut(s)	89, 92
HpyAV	CCTTC	3 cut(s)	133, 748, 960
HpyCH4III	ACNGT	1 cut(s)	467
HpyCH4IV	ACGT	2 cut(s)	430, 447
HpyCH4V	TGCA	9 cut(s)	355, 412, 451, 529, 535, 638, 727, 794, 812
HpyF10VI	GCNNNNNNNGC	1 cut(s)	854
HpyF3I	CTNAG	2 cut(s)	65, 442
HpySE526I	ACGT	2 cut(s)	430, 447
Hsp92II	CATG	7 cut(s)	311, 416, 671, 731, 901, 971, 998
HspAI	GCGC	3 cut(s)	32, 125, 305
KroI	GCCGGC	1 cut(s)	196
KroNI	GCCGGC	1 cut(s)	198
KspAI	GTTAAC	1 cut(s)	957
Kzo9I	GATC	5 cut(s)	469, 664, 766, 946, 1022
LmnI	GCTCC	4 cut(s)	39, 265, 803, 845
Lsp1109I	GCAGC	4 cut(s)	106, 622, 844, 906
LweI	GCATC	6 cut(s)	217, 306, 399, 544, 714, 961
MaeII	ACGT	2 cut(s)	430, 447
MaeIII	GTNAC	3 cut(s)	515, 733, 770
MalI	GATC	5 cut(s)	471, 666, 768, 948, 1024
MboI	GATC	5 cut(s)	469, 664, 766, 946, 1022
MboII	GAAGA	2 cut(s)	86, 251
MflI	RGATCY	2 cut(s)	946, 1022
MhlI	GDGCHC	1 cut(s)	796
MluCI	AATT	5 cut(s)	270, 600, 642, 759, 798
MlyI	GAGTC	4 cut(s)	125, 173, 358, 568
MmeI	TCCRAC	2 cut(s)	207, 231
MnlI	CCTC	6 cut(s)	235, 247, 601, 643, 897, 985
Mph1103I	ATGCAT	2 cut(s)	414, 729
MroNI	GCCGGC	1 cut(s)	196
MseI	TTAA	4 cut(s)	192, 459, 510, 956
MspA1I	CMGCKG	2 cut(s)	382, 635
MspCI	CTTAAG	1 cut(s)	509
MspI	CCGG	3 cut(s)	130, 188, 197
MspR9I	CCNGG	1 cut(s)	188
MvnI	CGCG	3 cut(s)	32, 125, 293
MwoI	GCNNNNNNNGC	1 cut(s)	854
NaeI	GCCGGC	1 cut(s)	198
NciI	CCSGG	1 cut(s)	188
NdeII	GATC	5 cut(s)	469, 664, 766, 946, 1022
NgoMIV	GCCGGC	1 cut(s)	196
NlaIII	CATG	7 cut(s)	311, 416, 671, 731, 901, 971, 998
NlaIV	GGNNCC	4 cut(s)	112, 267, 805, 865
NmuCI	GTSAC	1 cut(s)	770
NsiI	ATGCAT	2 cut(s)	414, 729
NspI	RCATGY	1 cut(s)	998
NspV	TTCGAA	1 cut(s)	990
PciI	ACATGT	1 cut(s)	994
PcsI	WCGNNNNNNNCGW	1 cut(s)	215
PdiI	GCCGGC	1 cut(s)	198
PfeI	GAWTC	1 cut(s)	166
PflMI	CCANNNNNTGG	1 cut(s)	385
PinAI	ACCGGT	1 cut(s)	129
PkrI	GCNGC	4 cut(s)	96, 637, 859, 896
PleI	GAGTC	4 cut(s)	124, 173, 358, 567
PpsI	GAGTC	4 cut(s)	124, 173, 358, 567
PscI	ACATGT	1 cut(s)	994
Psp1406I	AACGTT	1 cut(s)	430
PspEI	GGTNACC	1 cut(s)	515
PspFI	CCCAGC	4 cut(s)	24, 98, 378, 631
PspN4I	GGNNCC	4 cut(s)	112, 267, 805, 865
PspPI	GGNCC	1 cut(s)	111
PsuI	RGATCY	2 cut(s)	946, 1022
PvuII	CAGCTG	2 cut(s)	382, 635
RsaI	GTAC	3 cut(s)	155, 290, 673
RsaNI	GTAC	3 cut(s)	154, 289, 672
SaqAI	TTAA	4 cut(s)	192, 459, 510, 956
SatI	GCNGC	4 cut(s)	95, 636, 858, 895
Sau3AI	GATC	5 cut(s)	469, 664, 766, 946, 1022
Sau96I	GGNCC	1 cut(s)	111
SchI	GAGTC	4 cut(s)	125, 173, 358, 568
ScrFI	CCNGG	1 cut(s)	188
SduI	GDGCHC	1 cut(s)	796
SfaNI	GCATC	6 cut(s)	217, 306, 399, 544, 714, 961
SfuI	TTCGAA	1 cut(s)	990
SinI	GGWCC	1 cut(s)	111
SmlI	CTYRAG	1 cut(s)	509
SmoI	CTYRAG	1 cut(s)	509
Sse9I	AATT	5 cut(s)	270, 600, 642, 759, 798
SsiI	CCGC	2 cut(s)	79, 123
StyD4I	CCNGG	1 cut(s)	186
StyI	CCWWGG	1 cut(s)	582
TaaI	ACNGT	1 cut(s)	467
TaiI	ACGT	2 cut(s)	433, 450
TaqI	TCGA	2 cut(s)	538, 990
TasI	AATT	5 cut(s)	270, 600, 642, 759, 798
TfiI	GAWTC	1 cut(s)	166
Tru1I	TTAA	4 cut(s)	192, 459, 510, 956
Tru9I	TTAA	4 cut(s)	192, 459, 510, 956
TscAI	CASTG	3 cut(s)	19, 814, 1013
TseFI	GTSAC	1 cut(s)	770
TseI	GCWGC	4 cut(s)	94, 635, 857, 894
Tsp45I	GTSAC	1 cut(s)	770
TspDTI	ATGAA	3 cut(s)	708, 954, 977
TspRI	CASTG	3 cut(s)	19, 814, 1013
Van91I	CCANNNNNTGG	1 cut(s)	385
Vha464I	CTTAAG	1 cut(s)	509
VneI	GTGCAC	1 cut(s)	792
VpaK11BI	GGWCC	1 cut(s)	111
XceI	RCATGY	1 cut(s)	998
Zsp2I	ATGCAT	2 cut(s)	414, 729

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.