Rorug02G0067600

Serine acetyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
5252222 .. 5255503
3282 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0067600.1

Sequence Viewer

Length: 1881 bp
ATGGGTCAGCAGAGCTTGGCAACTCCACTTCTGTCTGATAACAACAAGAAGAGCTGGAACAGGAATCCTAGAGCTCTGTGGATTCTGCTTGCTTTTACAGCAATCATTTTTGTGGGGCTTATTTTTGGTGGCAGCAACGGCAACACAAATGGCTGGGTAGTACTGAGAGAATCAGATAAGGGGATTGGAGCAAATGAATCTGACATTGTTGAGTCAGAGCATGGTGTTGTTGCTGCTGATGATGCCAGGTGTTCCAAAATCGGTGCATCGATTCTTAGGCAGGGTGGGCATGCTGTTGATGCTTCAGTGGCAACAGCATTGTGCCTTGGCGTTGTTAATCCGATGGCAAGTGGAATAGGAGGTGGGGGGTTTATGGTTGTCAGATCTTCAGCAACCTCGAAAACCCAAGCTTTCGATATGAGGGAAACTGCTCCTTCAGCTGCTTCACAGAATATGTATGAAAGCAATCCTGAAGCCAAGTTATATGGTGCATTGTCAATGGGGGTTCCTGGTGAGATTGCTGGTCTACATGAAACATGGTTACAACATGGGCGAATGGCGTGGAGGACTTTATTTCAGCCTGCAATAAAGCTGGCTAAAGAGGGATTTGAAGTTGCTCCTTATCTTGGAGGACATATACGTTCATGTGAAGAAATGATTTTAAAAGACCCTGGCTTAAGGCAAGTGTTTGCCCCAAACGGGAAGGTGTTAAAAGCAGGTGATAAGTGTTATAATGTGGAACTTGGCAATAGCTTGGAGGCAATTGCAGAACTGGGGCCACAAGCCTTCTACAACGGTAGTCTTGGTGAAAAAATTGTAAAAGATGTGAGAGAGGCTGGTGGGATTTTGACAATGGAGGATTTGAGGAATTACAAAGTGAATGTTACGGATGCCATGACTGCAAATGTGTTGGGATATACCATATCAGGAATGCCACCTCCTTCAGCTGGAACTTTGGGGCTTTCTATGATTCTCAACATCTTCAACAGCTATGGAAATTCAGATGCAGCAAACGGAGATCTTGGTCTGCATCGTCTGATTGAAGCATTGAAACACATGTTTGCAATCCGAATGAACTTGGGTGATCCTGCTTTTGTAGATACCCATGAATATGCATCTAATATGCTTTCTCCATCCTTTGCTAAGGAAATTCAGCAGAAGATATTTGACAACACAACTTTCCCACCAGAGTACTATTCATACAGGTGGAGTCAGCTCAGAGATCACGGAACAAGTCATTTCTGCATAGTAGATGCAGACAGAAATGCGGTATCGATGACAACCACTGTAAACTATCCTTTTGGAGGTGGAGTACTCTCTCCTTCTACTGGAATTGTGCTCAACAATGAGATGGGTGACTTCTCAATTCCCACTGACATATCGCCAGACCATCTCCCTCCTGCTCCGTCAAATTTCATTGAACCAATCAAAAGACCTTTATCTTCCATGACTCCTATAATAGTCACAAAGGATAATCAATTGGTTGGTGTGCTTGGAGGTAGTGGTGGTTTGAACATTATCCCAGCTGTAACTCAGGTGTTTATCAATTATTTCATATTGGGGATGGAACCTTTAGCCGCAGTTCAAAGTCCAAGGGTCTACCACAGGCTAATACCAAACATAGTGTCCTATGAAAACTGGACTGTAATCGATGGAGATCATATCGAGCTTTCAGACGAAAGAAAGCTCTTCTTGCAGGAGCGGGGTCATGAATTGCAGGCTAAAGCCGGGGGAGCCATCACTCAGCTCATTGTTCAAAGACTTGGAAACCCTATTCGGATGGGCAGGAAATGTGGTAGAAGTTCAAATGAAAACGTTTTCCATGGTATACTCACTGCTGTAAGTGACCCTAGAAAAGATGGAAGGCCTGCAGCTGTATGA

Protein Analysis

626

Amino Acids

67.53

Weight (kDa)

6.04

Isoelectric Point (pI)

37.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G_glu_transpept PF01019 90 - 621 7.6e-174 Gamma-glutamyltranspeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 732
AarI CACCTGC 1 cut(s) 707
Acc36I ACCTGC 1 cut(s) 707
AccBSI CCGCTC 1 cut(s) 1702
AccI GTMKAC 3 cut(s) 526, 1599, 1828
AciI CCGC 3 cut(s) 1268, 1578, 1702
AclI AACGTT 1 cut(s) 1815
AclWI GGATC 1 cut(s) 1079
AcsI RAATTY 3 cut(s) 997, 1149, 1411
AcuI CTGAAG 5 cut(s) 288, 372, 420, 492, 927
AfaI GTAC 3 cut(s) 162, 1193, 1314
AfiI CCNNNNNNNGG 5 cut(s) 626, 699, 947, 1304, 1328
AflII CTTAAG 1 cut(s) 676
AflIII ACRYGT 1 cut(s) 1056
AgsI TTSAA 9 cut(s) 611, 985, 1043, 1051, 1421, 1513, 1586, 1757, 1806
AjnI CCWGG 3 cut(s) 245, 508, 670
Alw21I GWGCWC 2 cut(s) 76, 1341
AlwI GGATC 1 cut(s) 1079
AoxI GGCC 2 cut(s) 776, 1865
ApeKI GCWGC 5 cut(s) 132, 233, 440, 1007, 1871
ApoI RAATTY 3 cut(s) 997, 1149, 1411
ArsI GACNNNNNNTTYG 2 cut(s) 1610, 1642
AspS9I GGNCC 1 cut(s) 776
AsuC2I CCSGG 1 cut(s) 1729
AsuHPI GGTGA 5 cut(s) 524, 731, 818, 1094, 1367
BanII GRGCYC 1 cut(s) 76
Bbv12I GWGCWC 2 cut(s) 76, 1341
BbvI GCAGC 4 cut(s) 144, 220, 427, 1019
BccI CCATC 9 cut(s) 337, 1141, 1345, 1398, 1558, 1646, 1745, 1774, 1853
BceAI ACGGC 1 cut(s) 154
BciT130I CCWGG 3 cut(s) 247, 510, 672
BcnI CCSGG 1 cut(s) 1729
BfaI CTAG 2 cut(s) 69, 1851
BfmI CTRYAG 1 cut(s) 1869
BfrI CTTAAG 1 cut(s) 676
BfuAI ACCTGC 1 cut(s) 707
BglII AGATCT 2 cut(s) 383, 1018
BisI GCNGC 6 cut(s) 133, 234, 441, 1008, 1578, 1872
BlsI GCNGC 6 cut(s) 134, 235, 442, 1009, 1579, 1873
BmcAI AGTACT 3 cut(s) 162, 1193, 1314
Bme1390I CCNGG 4 cut(s) 247, 510, 672, 1729
BmgT120I GGNCC 1 cut(s) 776
BmiI GGNNCC 4 cut(s) 507, 777, 1569, 1735
BmrFI CCNGG 4 cut(s) 247, 510, 672, 1729
BmrI ACTGGG 1 cut(s) 782
BmsI GCATC 8 cut(s) 232, 275, 289, 880, 994, 1039, 1124, 1243
BmuI ACTGGG 1 cut(s) 782
Bpu10I CCTNAGC 1 cut(s) 1143
BpuMI CCSGG 1 cut(s) 1729
Bsa29I ATCGAT 3 cut(s) 269, 1274, 1650
BsaBI GATNNNNATC 1 cut(s) 1656
BsaJI CCNNGG 5 cut(s) 325, 670, 1592, 1728, 1822
BsaXI ACNNNNNCTCC 2 cut(s) 1296, 1326
Bsc4I CCNNNNNNNGG 5 cut(s) 626, 699, 947, 1304, 1328
Bse1I ACTGG 3 cut(s) 777, 1333, 1643
Bse8I GATNNNNATC 1 cut(s) 1656
BseBI CCWGG 3 cut(s) 247, 510, 672
BseCI ATCGAT 3 cut(s) 269, 1274, 1650
BseDI CCNNGG 5 cut(s) 325, 670, 1592, 1728, 1822
BseGI GGATG 4 cut(s) 895, 1133, 1569, 1785
BseJI GATNNNNATC 1 cut(s) 1656
BseLI CCNNNNNNNGG 5 cut(s) 626, 699, 947, 1304, 1328
BseMII CTCAG 4 cut(s) 155, 1231, 1547, 1757
BseNI ACTGG 3 cut(s) 777, 1333, 1643
BseXI GCAGC 4 cut(s) 144, 220, 427, 1019
BseYI CCCAGC 2 cut(s) 153, 1522
BshFI GGCC 2 cut(s) 778, 1867
BshVI ATCGAT 3 cut(s) 269, 1274, 1650
BsiHKAI GWGCWC 2 cut(s) 76, 1341
BsiSI CCGG 1 cut(s) 1728
BslI CCNNNNNNNGG 5 cut(s) 626, 699, 947, 1304, 1328
BsmI GAATGC 1 cut(s) 936
BsnI GGCC 2 cut(s) 778, 1867
Bsp1286I GDGCHC 2 cut(s) 76, 1341
Bsp143I GATC 5 cut(s) 383, 1018, 1084, 1222, 1657
Bsp19I CCATGG 1 cut(s) 1822
BspACI CCGC 3 cut(s) 1268, 1578, 1702
BspANI GGCC 2 cut(s) 778, 1867
BspCNI CTCAG 4 cut(s) 156, 1230, 1546, 1756
BspDI ATCGAT 3 cut(s) 269, 1274, 1650
BspHI TCATGA 1 cut(s) 1708
BspLI GGNNCC 4 cut(s) 507, 777, 1569, 1735
BspMAI CTGCAG 1 cut(s) 1873
BspMI ACCTGC 1 cut(s) 707
BspPI GGATC 1 cut(s) 1079
BspQI GCTCTTC 2 cut(s) 44, 1694
BspTI CTTAAG 1 cut(s) 676
BsrBI CCGCTC 1 cut(s) 1702
BsrI ACTGG 3 cut(s) 777, 1333, 1643
BssECI CCNNGG 5 cut(s) 325, 670, 1592, 1728, 1822
BssMI GATC 5 cut(s) 383, 1018, 1084, 1222, 1657
BssNAI GTATAC 1 cut(s) 1829
BssT1I CCWWGG 3 cut(s) 325, 1592, 1822
Bst1107I GTATAC 1 cut(s) 1829
Bst2UI CCWGG 3 cut(s) 247, 510, 672
Bst4CI ACNGT 3 cut(s) 797, 1288, 1645
Bst6I CTCTTC 2 cut(s) 44, 1694
BstAFI CTTAAG 1 cut(s) 676
BstC8I GCNNGC 6 cut(s) 90, 291, 582, 594, 1719, 1869
BstDEI CTNAG 6 cut(s) 164, 275, 1143, 1217, 1533, 1743
BstDSI CCRYGG 1 cut(s) 1822
BstENI CCTNNNNNAGG 1 cut(s) 1302
BstF5I GGATG 4 cut(s) 895, 1133, 1569, 1785
BstKTI GATC 5 cut(s) 386, 1021, 1087, 1225, 1660
BstMBI GATC 5 cut(s) 383, 1018, 1084, 1222, 1657
BstNI CCWGG 3 cut(s) 247, 510, 672
BstNSI RCATGY 2 cut(s) 293, 1060
BstSCI CCNGG 4 cut(s) 245, 508, 670, 1727
BstSFI CTRYAG 1 cut(s) 1869
BstV1I GCAGC 4 cut(s) 144, 220, 427, 1019
BstX2I RGATCY 2 cut(s) 383, 1018
BstYI RGATCY 2 cut(s) 383, 1018
BstZ17I GTATAC 1 cut(s) 1829
Bsu15I ATCGAT 3 cut(s) 269, 1274, 1650
BsuRI GGCC 2 cut(s) 778, 1867
BsuTUI ATCGAT 3 cut(s) 269, 1274, 1650
BtgI CCRYGG 1 cut(s) 1822
BtsCI GGATG 4 cut(s) 895, 1133, 1569, 1785
BtsI GCAGTG 1 cut(s) 1833
BtsIMutI CAGTG 4 cut(s) 312, 1284, 1371, 1833
BveI ACCTGC 1 cut(s) 707
Cac8I GCNNGC 6 cut(s) 90, 291, 582, 594, 1719, 1869
CciI TCATGA 1 cut(s) 1708
Cfr13I GGNCC 1 cut(s) 776
ClaI ATCGAT 3 cut(s) 269, 1274, 1650
Csp6I GTAC 3 cut(s) 161, 1192, 1313
CviQI GTAC 3 cut(s) 161, 1192, 1313
DdeI CTNAG 6 cut(s) 164, 275, 1143, 1217, 1533, 1743
DpnI GATC 5 cut(s) 385, 1020, 1086, 1224, 1659
DpnII GATC 5 cut(s) 383, 1018, 1084, 1222, 1657
DraI TTTAAA 1 cut(s) 663
Eam1104I CTCTTC 2 cut(s) 44, 1694
EarI CTCTTC 2 cut(s) 44, 1694
Ecl136II GAGCTC 1 cut(s) 74
Eco130I CCWWGG 3 cut(s) 325, 1592, 1822
Eco147I AGGCCT 1 cut(s) 1867
Eco24I GRGCYC 1 cut(s) 76
Eco53kI GAGCTC 1 cut(s) 74
Eco57I CTGAAG 5 cut(s) 288, 372, 420, 492, 927
EcoICRI GAGCTC 1 cut(s) 74
EcoNI CCTNNNNNAGG 1 cut(s) 1302
EcoRII CCWGG 3 cut(s) 245, 508, 670
EcoT14I CCWWGG 3 cut(s) 325, 1592, 1822
EcoT22I ATGCAT 1 cut(s) 1117
EcoT38I GRGCYC 1 cut(s) 76
ErhI CCWWGG 3 cut(s) 325, 1592, 1822
FalI AAGNNNNNCTT 2 cut(s) 1676, 1708
FauI CCCGC 1 cut(s) 1695
FblI GTMKAC 3 cut(s) 526, 1599, 1828
Fnu4HI GCNGC 6 cut(s) 133, 234, 441, 1008, 1578, 1872
FokI GGATG 4 cut(s) 902, 1120, 1576, 1792
FriOI GRGCYC 1 cut(s) 76
Fsp4HI GCNGC 6 cut(s) 133, 234, 441, 1008, 1578, 1872
FspBI CTAG 2 cut(s) 69, 1851
GluI GCNGC 6 cut(s) 133, 234, 441, 1008, 1578, 1872
GsaI CCCAGC 2 cut(s) 157, 1526
HaeIII GGCC 2 cut(s) 778, 1867
HapII CCGG 1 cut(s) 1728
HindIII AAGCTT 1 cut(s) 408
HinfI GANTC 9 cut(s) 64, 82, 170, 197, 212, 271, 970, 1210, 1450
HpaII CCGG 1 cut(s) 1728
HphI GGTGA 5 cut(s) 524, 731, 818, 1094, 1367
Hpy166II GTNNAC 4 cut(s) 527, 1291, 1600, 1829
Hpy188III TCNNGA 3 cut(s) 470, 927, 1709
Hpy8I GTNNAC 4 cut(s) 527, 1291, 1600, 1829
HpyAV CCTTC 6 cut(s) 444, 697, 796, 951, 1332, 1857
HpyCH4III ACNGT 3 cut(s) 797, 1288, 1645
HpyCH4IV ACGT 2 cut(s) 640, 1815
HpyF3I CTNAG 6 cut(s) 164, 275, 1143, 1217, 1533, 1743
HpySE526I ACGT 2 cut(s) 640, 1815
Kzo9I GATC 5 cut(s) 383, 1018, 1084, 1222, 1657
LguI GCTCTTC 2 cut(s) 44, 1694
LmnI GCTCC 6 cut(s) 188, 436, 622, 1408, 1699, 1733
Lsp1109I GCAGC 4 cut(s) 144, 220, 427, 1019
LweI GCATC 8 cut(s) 232, 275, 289, 880, 994, 1039, 1124, 1243
MaeI CTAG 2 cut(s) 69, 1851
MaeII ACGT 2 cut(s) 640, 1815
MaeIII GTNAC 6 cut(s) 540, 883, 1355, 1462, 1528, 1844
MalI GATC 5 cut(s) 385, 1020, 1086, 1224, 1659
MbiI CCGCTC 1 cut(s) 1702
MboI GATC 5 cut(s) 383, 1018, 1084, 1222, 1657
MboII GAAGA 7 cut(s) 61, 378, 662, 973, 1171, 1434, 1681
MfeI CAATTG 2 cut(s) 762, 1478
MflI RGATCY 2 cut(s) 383, 1018
MhlI GDGCHC 2 cut(s) 76, 1341
MlyI GAGTC 3 cut(s) 221, 1219, 1444
Mph1103I ATGCAT 1 cut(s) 1117
MseI TTAA 4 cut(s) 336, 662, 677, 710
MslI CAYNNNNRTG 3 cut(s) 110, 1110, 1204
MspA1I CMGCKG 4 cut(s) 440, 947, 1526, 1874
MspCI CTTAAG 1 cut(s) 676
MspI CCGG 1 cut(s) 1728
MspR9I CCNGG 4 cut(s) 247, 510, 672, 1729
MunI CAATTG 2 cut(s) 762, 1478
Mva1269I GAATGC 1 cut(s) 936
MvaI CCWGG 3 cut(s) 247, 510, 672
NciI CCSGG 1 cut(s) 1729
NcoI CCATGG 1 cut(s) 1822
NdeII GATC 5 cut(s) 383, 1018, 1084, 1222, 1657
NlaIV GGNNCC 4 cut(s) 507, 777, 1569, 1735
NmuCI GTSAC 3 cut(s) 1355, 1462, 1844
NsiI ATGCAT 1 cut(s) 1117
NspI RCATGY 2 cut(s) 293, 1060
PaeI GCATGC 1 cut(s) 293
PagI TCATGA 1 cut(s) 1708
PaqCI CACCTGC 1 cut(s) 707
PceI AGGCCT 1 cut(s) 1867
PciI ACATGT 1 cut(s) 1056
PciSI GCTCTTC 2 cut(s) 44, 1694
PctI GAATGC 1 cut(s) 936
PfeI GAWTC 6 cut(s) 64, 82, 170, 197, 271, 970
PkrI GCNGC 6 cut(s) 134, 235, 442, 1009, 1579, 1873
PleI GAGTC 3 cut(s) 220, 1218, 1444
PpsI GAGTC 3 cut(s) 220, 1218, 1444
PscI ACATGT 1 cut(s) 1056
PsiI TTATAA 1 cut(s) 732
Psp124BI GAGCTC 1 cut(s) 76
Psp1406I AACGTT 1 cut(s) 1815
Psp6I CCWGG 3 cut(s) 245, 508, 670
PspFI CCCAGC 2 cut(s) 153, 1522
PspGI CCWGG 3 cut(s) 245, 508, 670
PspN4I GGNNCC 4 cut(s) 507, 777, 1569, 1735
PspPI GGNCC 1 cut(s) 776
PstI CTGCAG 1 cut(s) 1873
PsuI RGATCY 2 cut(s) 383, 1018
PvuII CAGCTG 4 cut(s) 440, 947, 1526, 1874
RsaI GTAC 3 cut(s) 162, 1193, 1314
RsaNI GTAC 3 cut(s) 161, 1192, 1313
RseI CAYNNNNRTG 3 cut(s) 110, 1110, 1204
SacI GAGCTC 1 cut(s) 76
SapI GCTCTTC 2 cut(s) 44, 1694
SaqAI TTAA 4 cut(s) 336, 662, 677, 710
SatI GCNGC 6 cut(s) 133, 234, 441, 1008, 1578, 1872
Sau3AI GATC 5 cut(s) 383, 1018, 1084, 1222, 1657
Sau96I GGNCC 1 cut(s) 776
ScaI AGTACT 3 cut(s) 162, 1193, 1314
SchI GAGTC 3 cut(s) 221, 1219, 1444
ScrFI CCNGG 4 cut(s) 247, 510, 672, 1729
SduI GDGCHC 2 cut(s) 76, 1341
SfaNI GCATC 8 cut(s) 232, 275, 289, 880, 994, 1039, 1124, 1243
SfcI CTRYAG 1 cut(s) 1869
SmiMI CAYNNNNRTG 3 cut(s) 110, 1110, 1204
SmlI CTYRAG 1 cut(s) 676
SmoI CTYRAG 1 cut(s) 676
SphI GCATGC 1 cut(s) 293
SseBI AGGCCT 1 cut(s) 1867
SsiI CCGC 3 cut(s) 1268, 1578, 1702
SspMI CTAG 2 cut(s) 69, 1851
SstI GAGCTC 1 cut(s) 76
StuI AGGCCT 1 cut(s) 1867
StyD4I CCNGG 4 cut(s) 245, 508, 670, 1727
StyI CCWWGG 3 cut(s) 325, 1592, 1822
TaaI ACNGT 3 cut(s) 797, 1288, 1645
TaiI ACGT 2 cut(s) 643, 1818
TaqI TCGA 6 cut(s) 269, 398, 414, 1274, 1650, 1665
TatI WGTACW 3 cut(s) 160, 1191, 1312
TauI GCSGC 1 cut(s) 1580
TfiI GAWTC 6 cut(s) 64, 82, 170, 197, 271, 970
Tru1I TTAA 4 cut(s) 336, 662, 677, 710
Tru9I TTAA 4 cut(s) 336, 662, 677, 710
TscAI CASTG 4 cut(s) 312, 1291, 1378, 1840
TseFI GTSAC 3 cut(s) 1355, 1462, 1844
TseI GCWGC 5 cut(s) 132, 233, 440, 1007, 1871
Tsp45I GTSAC 3 cut(s) 1355, 1462, 1844
TspGWI ACGGA 4 cut(s) 902, 1029, 1242, 1395
TspRI CASTG 4 cut(s) 312, 1291, 1378, 1840
Vha464I CTTAAG 1 cut(s) 676
XagI CCTNNNNNAGG 1 cut(s) 1302
XapI RAATTY 3 cut(s) 997, 1149, 1411
XceI RCATGY 2 cut(s) 293, 1060
XmiI GTMKAC 3 cut(s) 526, 1599, 1828
XspI CTAG 2 cut(s) 69, 1851
ZrmI AGTACT 3 cut(s) 162, 1193, 1314
Zsp2I ATGCAT 1 cut(s) 1117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.