Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003572

Physical Location & Seq

Genomic Coordinates Forward (+)

630748 .. 632792

Gene Structure 2045 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G02780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 714 bp

ATGGCTCTATCTCCTCCAAAAATTTTCGTAGAAGATCGTCAGGTTCCGCTCGATGCTACCTCTGATCCACCTGCTCTGTTCGACGGAACCACAAGGTTGTACATAAGCTACACTTGCCCATTTGCACAACGTGTTTGGATTACAAGAAACCTCAAGGGTCTGCAAGATGAGATCAAATTGGTTCCTATAGATCTTCCTAATAGGCCAGCTTGGTTAAAGGAGAAAGTTAATCCTGCAAACAAGGTTCCTGCCCTTGAACACAATGGAAAAATCACTGGGGAGAGTCTTGATCTAATCAAATATGTCGATAGCAATTTTGATGGACCTTCACTTTACCCTGAGGATTCTGCAAAGAGAGAGTTTGGTGAAGAACTGTTGAAATATGTCGATGAAACATTTGTAAAAACTGTGTTTGGCTCTTTCAAAGGTGACCCGGTTAAAGAAACAGCATCAGCCTTCGATCACGTGGAAAATGCTCTGAAAAAGTTTGATGATGGTCCTTTCTTCCTTGGCGAGCTTAGTTTGGTTGATATTGCATATATCCCATTTATCGAACGCTTTCAAGTCTTCCTCGACGAAGTTTTTAAATATGAAATTATAATCGGACGGCCAAATCTAGCTGCTTGGATTGAGCAAATGAACAAGATGGTTGCATATACGCAGACCAAAACCGACTCCGAATATGTTGTCAATTACTTCAAGAGATTCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0010731 GO:0016740 GO:0016765 GO:0019538 GO:0034641 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043603 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0050896 GO:0051186 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C_2 GST_N_3

Protein Analysis

237

Amino Acids

27.17

Weight (kDa)

4.97

Isoelectric Point (pI)

40.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GST_N_3	PF13417	33 - 109	3.8e-22	Glutathione S-transferase, N-terminal domain
GST_N_2	PF13409	38 - 104	6.8e-19	Glutathione S-transferase, N-terminal domain
GST_C_2	PF13410	150 - 211	2e-10	Glutathione S-transferase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0003572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02780 AT5G02780 AT5G02780 AT5G02790
fragaria_vesca	FvH4_6g14970 FvH4_6g14970
malus_domestica	MD04G1111400.v1.1 MD04G1111600.v1.1 MD04G1111700.v1.1 MD04G1112000.v1.1 MD04G1112100.v1.1 MD12G1129400.v1.1
prunus_persica	Prupe.6G244700_v2.0.a1
pyrus_communis	pycom04g10330 pycom04g10340 pycom12g12570
rosa_chinensis	RchiOBHm_Chr3g0468151 RchiOBHm_Chr3g0468161
rosa_laevigata	RLG00000024444
rosa_multiflora	Rmu_sc0001810.1_g000001 Rmu_sc0003659.1_g000008 Rmu_sc0005590.1_g000002 Rmu_sc0021707.1_g000001
rosa_roxburghii	Rroxscaffold_6G00412980
rosa_rugosa	Rorug03G0093700 Rorug03G0093700
rosa_samantha	Rh3AG141600 Rh3AG141700 Rh3BG163100 Rh3CG163000 Rh3CG163200 Rh3DG163600 Rh3DG163800
rosa_wichuraiana	Rw3G013380 Rw3G013390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	599
AarI	CACCTGC	1 cut(s)	79
Acc36I	ACCTGC	1 cut(s)	79
AccBSI	CCGCTC	1 cut(s)	49
AciI	CCGC	1 cut(s)	47
AclWI	GGATC	1 cut(s)	59
AcoI	YGGCCR	1 cut(s)	608
AcsI	RAATTY	1 cut(s)	21
AcvI	CACGTG	1 cut(s)	466
AdeI	CACNNNGTG	1 cut(s)	131
AfaI	GTAC	1 cut(s)	101
AflIII	ACRYGT	1 cut(s)	130
AgsI	TTSAA	5 cut(s)	257, 379, 424, 563, 700
AluBI	AGCT	4 cut(s)	108, 209, 517, 620
AluI	AGCT	4 cut(s)	108, 209, 517, 620
AlwI	GGATC	1 cut(s)	59
AoxI	GGCC	2 cut(s)	203, 608
ApeKI	GCWGC	1 cut(s)	620
ApoI	RAATTY	1 cut(s)	21
ArsI	GACNNNNNNTTYG	2 cut(s)	672, 704
Asp700I	GAANNNNTTC	1 cut(s)	558
AspS9I	GGNCC	2 cut(s)	323, 497
AsuC2I	CCSGG	1 cut(s)	434
AsuHPI	GGTGA	2 cut(s)	377, 440
AvaII	GGWCC	2 cut(s)	323, 497
AxyI	CCTNAGG	1 cut(s)	339
BbrPI	CACGTG	1 cut(s)	466
BbsI	GAAGAC	1 cut(s)	559
BbvI	GCAGC	1 cut(s)	607
BccI	CCATC	3 cut(s)	314, 488, 640
BceAI	ACGGC	1 cut(s)	623
BcnI	CCSGG	1 cut(s)	434
BfaI	CTAG	1 cut(s)	617
BfmI	CTRYAG	1 cut(s)	186
BfuAI	ACCTGC	1 cut(s)	79
BglII	AGATCT	1 cut(s)	190
BisI	GCNGC	1 cut(s)	621
BlsI	GCNGC	1 cut(s)	622
Bme1390I	CCNGG	1 cut(s)	434
Bme18I	GGWCC	2 cut(s)	323, 497
BmgT120I	GGNCC	2 cut(s)	323, 497
BmiI	GGNNCC	4 cut(s)	45, 88, 183, 246
BmrFI	CCNGG	1 cut(s)	434
BmrI	ACTGGG	1 cut(s)	285
BmsI	GCATC	2 cut(s)	43, 458
BmuI	ACTGGG	1 cut(s)	285
BpiI	GAAGAC	1 cut(s)	559
BpuEI	CTTGAG	1 cut(s)	137
BpuMI	CCSGG	1 cut(s)	434
BsaAI	YACGTR	1 cut(s)	466
BsaJI	CCNNGG	1 cut(s)	508
Bse1I	ACTGG	1 cut(s)	280
Bse21I	CCTNAGG	1 cut(s)	339
BseDI	CCNNGG	1 cut(s)	508
BseMII	CTCAG	1 cut(s)	330
BseNI	ACTGG	1 cut(s)	280
BseXI	GCAGC	1 cut(s)	607
BshFI	GGCC	2 cut(s)	205, 610
BsiSI	CCGG	1 cut(s)	434
BsnI	GGCC	2 cut(s)	205, 610
Bsp1407I	TGTACA	1 cut(s)	99
Bsp143I	GATC	6 cut(s)	34, 64, 171, 190, 289, 460
BspACI	CCGC	1 cut(s)	47
BspANI	GGCC	2 cut(s)	205, 610
BspCNI	CTCAG	1 cut(s)	331
BspLI	GGNNCC	4 cut(s)	45, 88, 183, 246
BspMI	ACCTGC	1 cut(s)	79
BspPI	GGATC	1 cut(s)	59
BsrBI	CCGCTC	1 cut(s)	49
BsrGI	TGTACA	1 cut(s)	99
BsrI	ACTGG	1 cut(s)	280
BssECI	CCNNGG	1 cut(s)	508
BssMI	GATC	6 cut(s)	34, 64, 171, 190, 289, 460
BssT1I	CCWWGG	1 cut(s)	508
Bst4CI	ACNGT	2 cut(s)	375, 409
BstAUI	TGTACA	1 cut(s)	99
BstBAI	YACGTR	1 cut(s)	466
BstC8I	GCNNGC	2 cut(s)	207, 515
BstDEI	CTNAG	2 cut(s)	339, 518
BstEII	GGTNACC	1 cut(s)	428
BstKTI	GATC	6 cut(s)	37, 67, 174, 193, 292, 463
BstMBI	GATC	6 cut(s)	34, 64, 171, 190, 289, 460
BstMWI	GCNNNNNNNGC	1 cut(s)	114
BstPI	GGTNACC	1 cut(s)	428
BstSCI	CCNGG	1 cut(s)	432
BstSFI	CTRYAG	1 cut(s)	186
BstV1I	GCAGC	1 cut(s)	607
BstV2I	GAAGAC	1 cut(s)	559
BstX2I	RGATCY	1 cut(s)	190
BstYI	RGATCY	1 cut(s)	190
Bsu36I	CCTNAGG	1 cut(s)	339
BsuRI	GGCC	2 cut(s)	205, 610
BtsIMutI	CAGTG	1 cut(s)	273
BveI	ACCTGC	1 cut(s)	79
Cac8I	GCNNGC	2 cut(s)	207, 515
Cfr13I	GGNCC	2 cut(s)	323, 497
Csp6I	GTAC	1 cut(s)	100
CviAII	CATG	1 cut(s)	709
CviJI	RGCY	9 cut(s)	5, 108, 205, 209, 417, 455, 517, 610, 620
CviKI_1	RGCY	9 cut(s)	5, 108, 205, 209, 417, 455, 517, 610, 620
CviQI	GTAC	1 cut(s)	100
DdeI	CTNAG	2 cut(s)	339, 518
DpnI	GATC	6 cut(s)	36, 66, 173, 192, 291, 462
DpnII	GATC	6 cut(s)	34, 64, 171, 190, 289, 460
DraI	TTTAAA	1 cut(s)	586
DraIII	CACNNNGTG	1 cut(s)	131
EaeI	YGGCCR	1 cut(s)	608
Eco130I	CCWWGG	1 cut(s)	508
Eco47I	GGWCC	2 cut(s)	323, 497
Eco72I	CACGTG	1 cut(s)	466
Eco81I	CCTNAGG	1 cut(s)	339
Eco91I	GGTNACC	1 cut(s)	428
EcoO65I	GGTNACC	1 cut(s)	428
EcoT14I	CCWWGG	1 cut(s)	508
ErhI	CCWWGG	1 cut(s)	508
FaeI	CATG	1 cut(s)	712
FalI	AAGNNNNNCTT	2 cut(s)	97, 129
FatI	CATG	1 cut(s)	708
Fnu4HI	GCNGC	1 cut(s)	621
Fsp4HI	GCNGC	1 cut(s)	621
FspBI	CTAG	1 cut(s)	617
GluI	GCNGC	1 cut(s)	621
HaeIII	GGCC	2 cut(s)	205, 610
HapII	CCGG	1 cut(s)	434
Hin1II	CATG	1 cut(s)	712
HinfI	GANTC	4 cut(s)	283, 344, 674, 705
HpaII	CCGG	1 cut(s)	434
HphI	GGTGA	2 cut(s)	377, 440
Hpy188I	TCNGA	4 cut(s)	64, 480, 605, 679
Hpy188III	TCNNGA	2 cut(s)	287, 700
Hpy99I	CGWCG	2 cut(s)	86, 578
HpyAV	CCTTC	2 cut(s)	336, 466
HpyCH4III	ACNGT	2 cut(s)	375, 409
HpyCH4IV	ACGT	2 cut(s)	130, 465
HpyCH4V	TGCA	6 cut(s)	125, 163, 236, 350, 536, 653
HpyF10VI	GCNNNNNNNGC	1 cut(s)	114
HpyF3I	CTNAG	2 cut(s)	339, 518
HpySE526I	ACGT	2 cut(s)	130, 465
Hsp92II	CATG	1 cut(s)	712
Kzo9I	GATC	6 cut(s)	34, 64, 171, 190, 289, 460
LpnPI	CCDG	8 cut(s)	26, 84, 219, 246, 261, 261, 351, 447
Lsp1109I	GCAGC	1 cut(s)	607
LweI	GCATC	2 cut(s)	43, 458
MaeI	CTAG	1 cut(s)	617
MaeII	ACGT	2 cut(s)	130, 465
MaeIII	GTNAC	1 cut(s)	428
MalI	GATC	6 cut(s)	36, 66, 173, 192, 291, 462
MbiI	CCGCTC	1 cut(s)	49
MboI	GATC	6 cut(s)	34, 64, 171, 190, 289, 460
MboII	GAAGA	5 cut(s)	44, 185, 380, 496, 559
MflI	RGATCY	1 cut(s)	190
MluCI	AATT	5 cut(s)	21, 176, 313, 594, 691
MlyI	GAGTC	2 cut(s)	292, 668
MnlI	CCTC	5 cut(s)	24, 70, 161, 334, 581
MroXI	GAANNNNTTC	1 cut(s)	558
MseI	TTAA	4 cut(s)	215, 228, 438, 585
MspI	CCGG	1 cut(s)	434
MspR9I	CCNGG	1 cut(s)	434
MwoI	GCNNNNNNNGC	1 cut(s)	114
NciI	CCSGG	1 cut(s)	434
NdeII	GATC	6 cut(s)	34, 64, 171, 190, 289, 460
NlaIII	CATG	1 cut(s)	712
NlaIV	GGNNCC	4 cut(s)	45, 88, 183, 246
NmuCI	GTSAC	1 cut(s)	428
PaqCI	CACCTGC	1 cut(s)	79
PdmI	GAANNNNTTC	1 cut(s)	558
PfeI	GAWTC	2 cut(s)	344, 705
PkrI	GCNGC	1 cut(s)	622
PleI	GAGTC	2 cut(s)	291, 668
PmaCI	CACGTG	1 cut(s)	466
PmlI	CACGTG	1 cut(s)	466
PpsI	GAGTC	2 cut(s)	291, 668
Ppu21I	YACGTR	1 cut(s)	466
PsiI	TTATAA	1 cut(s)	599
PspCI	CACGTG	1 cut(s)	466
PspEI	GGTNACC	1 cut(s)	428
PspN4I	GGNNCC	4 cut(s)	45, 88, 183, 246
PspPI	GGNCC	2 cut(s)	323, 497
PsuI	RGATCY	1 cut(s)	190
RsaI	GTAC	1 cut(s)	101
RsaNI	GTAC	1 cut(s)	100
SaqAI	TTAA	4 cut(s)	215, 228, 438, 585
SatI	GCNGC	1 cut(s)	621
Sau3AI	GATC	6 cut(s)	34, 64, 171, 190, 289, 460
Sau96I	GGNCC	2 cut(s)	323, 497
SchI	GAGTC	2 cut(s)	292, 668
ScrFI	CCNGG	1 cut(s)	434
SfaNI	GCATC	2 cut(s)	43, 458
SfcI	CTRYAG	1 cut(s)	186
SinI	GGWCC	2 cut(s)	323, 497
SmlI	CTYRAG	1 cut(s)	152
SmoI	CTYRAG	1 cut(s)	152
Sse9I	AATT	5 cut(s)	21, 176, 313, 594, 691
SsiI	CCGC	1 cut(s)	47
SspMI	CTAG	1 cut(s)	617
StyD4I	CCNGG	1 cut(s)	432
StyI	CCWWGG	1 cut(s)	508
TaaI	ACNGT	2 cut(s)	375, 409
TaiI	ACGT	2 cut(s)	133, 468
TaqI	TCGA	7 cut(s)	51, 81, 306, 387, 459, 552, 573
TasI	AATT	5 cut(s)	21, 176, 313, 594, 691
TatI	WGTACW	1 cut(s)	99
TfiI	GAWTC	2 cut(s)	344, 705
Tru1I	TTAA	4 cut(s)	215, 228, 438, 585
Tru9I	TTAA	4 cut(s)	215, 228, 438, 585
TscAI	CASTG	1 cut(s)	280
TseFI	GTSAC	1 cut(s)	428
TseI	GCWGC	1 cut(s)	620
Tsp45I	GTSAC	1 cut(s)	428
TspDTI	ATGAA	4 cut(s)	405, 606, 653, 697
TspGWI	ACGGA	1 cut(s)	99
TspRI	CASTG	1 cut(s)	280
VpaK11BI	GGWCC	2 cut(s)	323, 497
XapI	RAATTY	1 cut(s)	21
XmnI	GAANNNNTTC	1 cut(s)	558
XspI	CTAG	1 cut(s)	617

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.