AT5G14750
MYB Family

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0005570
Physical Location & Seq
Reverse (-)
4763372 .. 4764834
1463 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G14750.4

Sequence Viewer

Length: 612 bp
ATGAGAAAGAAAGTAAGTAGTAGTGGTGACGAAGGAAACAATGAGTACAAGAAAGGTTTGTGGACAGTAGAAGAAGACAAAATCCTCATGGATTATGTCAAAGCTCATGGCAAAGGTCACTGGAATCGTATTGCCAAAAAGACTGGTTTAAAGAGATGTGGAAAGAGTTGTAGATTGAGGTGGATGAATTATCTCAGCCCTAATGTGAAAAGAGGCAATTTCACCGAGCAAGAAGAGGATCTTATCATTAGGCTCCACAAGTTGCTTGGTAATAGGTGGTCTTTAATTGCTAAAAGAGTGCCGGGTCGAACGGATAATCAAGTGAAGAACTATTGGAACACGCATCTTAGTAAGAAACTCGGAATCAAAGATCAGAAAACCAAACAGAGCAATGGTGATATTGTTTATCAAATCAATCTCCCGAATCCTACCGAAACATCAGAAGAAACGAAAATCTCGAATATTGTCGATAACAATAATATCCTCGGAGATGAAATTCAAGAAGATCATCAAGGAAGTAACTACTTGAGTTCACTTTGGGTTCATGAGGATGAGTTTGAGCTTAGCACACTCACCAACATGATGGACTTTATAGATGGACACTGTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000902 GO:0000904 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0001708 GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009753 GO:0009755 GO:0009867 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010015 GO:0010026 GO:0010033 GO:0010053 GO:0010054 GO:0010090 GO:0010091 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010769 GO:0016043 GO:0019219 GO:0019222 GO:0021700 GO:0022603 GO:0022604 GO:0022622 GO:0023052 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0032880 GO:0032989 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045165 GO:0045168 GO:0045595 GO:0045893 GO:0045935 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048629 GO:0048731 GO:0048764 GO:0048765 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0060284 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071395 GO:0071396 GO:0071495 GO:0071695 GO:0071840 GO:0080090 GO:0090558 GO:0090626 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000024 GO:2000026 GO:2000039 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

203

Amino Acids

23.57

Weight (kDa)

8.64

Isoelectric Point (pI)

43.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 10 - 55 4.1e-20 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 13 - 58 5.9e-10 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 246
AcsI RAATTY 1 cut(s) 495
AfaI GTAC 1 cut(s) 47
AgsI TTSAA 1 cut(s) 500
AluBI AGCT 2 cut(s) 104, 562
AluI AGCT 2 cut(s) 104, 562
AlwI GGATC 1 cut(s) 246
ApoI RAATTY 1 cut(s) 495
ArsI GACNNNNNNTTYG 1 cut(s) 591
AsuC2I CCSGG 1 cut(s) 303
AsuHPI GGTGA 4 cut(s) 38, 214, 407, 565
BbsI GAAGAC 1 cut(s) 81
BccI CCATC 2 cut(s) 577, 590
BcnI CCSGG 1 cut(s) 303
BlpI GCTNAGC 1 cut(s) 563
Bme1390I CCNGG 1 cut(s) 303
BmiI GGNNCC 1 cut(s) 254
BmrFI CCNGG 1 cut(s) 303
BmsI GCATC 1 cut(s) 352
BpiI GAAGAC 1 cut(s) 81
Bpu1102I GCTNAGC 1 cut(s) 563
BpuEI CTTGAG 1 cut(s) 547
BpuMI CCSGG 1 cut(s) 303
BsaJI CCNNGG 1 cut(s) 484
Bse1I ACTGG 2 cut(s) 125, 148
Bse3DI GCAATG 1 cut(s) 397
BseDI CCNNGG 1 cut(s) 484
BseGI GGATG 2 cut(s) 189, 556
BseMI GCAATG 1 cut(s) 397
BseMII CTCAG 1 cut(s) 208
BseNI ACTGG 2 cut(s) 125, 148
BsiSI CCGG 1 cut(s) 302
Bsp143I GATC 3 cut(s) 238, 370, 505
Bsp1720I GCTNAGC 1 cut(s) 563
BspCNI CTCAG 1 cut(s) 207
BspHI TCATGA 1 cut(s) 544
BspLI GGNNCC 1 cut(s) 254
BspPI GGATC 1 cut(s) 246
BsrDI GCAATG 1 cut(s) 397
BsrI ACTGG 2 cut(s) 125, 148
BssECI CCNNGG 1 cut(s) 484
BssMI GATC 3 cut(s) 238, 370, 505
Bst4CI ACNGT 2 cut(s) 67, 605
Bst6I CTCTTC 1 cut(s) 228
BstDEI CTNAG 3 cut(s) 194, 347, 563
BstF5I GGATG 2 cut(s) 189, 556
BstKTI GATC 3 cut(s) 241, 373, 508
BstMBI GATC 3 cut(s) 238, 370, 505
BstSCI CCNGG 1 cut(s) 301
BstV2I GAAGAC 1 cut(s) 81
BstX2I RGATCY 1 cut(s) 238
BstXI CCANNNNNNTGG 1 cut(s) 583
BstYI RGATCY 1 cut(s) 238
BtsCI GGATG 2 cut(s) 189, 556
BtsIMutI CAGTG 2 cut(s) 118, 601
CciI TCATGA 1 cut(s) 544
Csp6I GTAC 1 cut(s) 46
CviAII CATG 4 cut(s) 88, 107, 545, 580
CviJI RGCY 4 cut(s) 104, 198, 253, 562
CviKI_1 RGCY 4 cut(s) 104, 198, 253, 562
CviQI GTAC 1 cut(s) 46
DdeI CTNAG 3 cut(s) 194, 347, 563
DpnI GATC 3 cut(s) 240, 372, 507
DpnII GATC 3 cut(s) 238, 370, 505
DraI TTTAAA 1 cut(s) 150
Eam1104I CTCTTC 1 cut(s) 228
EarI CTCTTC 1 cut(s) 228
FaeI CATG 4 cut(s) 91, 110, 548, 583
FaiI YATR 6 cut(s) 89, 96, 108, 546, 581, 593
FalI AAGNNNNNCTT 2 cut(s) 225, 257
FatI CATG 4 cut(s) 87, 106, 544, 579
FokI GGATG 2 cut(s) 196, 563
HapII CCGG 1 cut(s) 302
Hin1II CATG 4 cut(s) 91, 110, 548, 583
HinfI GANTC 3 cut(s) 124, 363, 424
HpaII CCGG 1 cut(s) 302
HphI GGTGA 4 cut(s) 38, 214, 407, 565
Hpy166II GTNNAC 2 cut(s) 63, 533
Hpy188I TCNGA 4 cut(s) 362, 375, 442, 488
Hpy188III TCNNGA 4 cut(s) 421, 457, 500, 545
Hpy8I GTNNAC 2 cut(s) 63, 533
HpyAV CCTTC 1 cut(s) 26
HpyCH4III ACNGT 2 cut(s) 67, 605
HpyF3I CTNAG 3 cut(s) 194, 347, 563
Hsp92II CATG 4 cut(s) 91, 110, 548, 583
Kzo9I GATC 3 cut(s) 238, 370, 505
LmnI GCTCC 1 cut(s) 258
LpnPI CCDG 3 cut(s) 106, 129, 315
LweI GCATC 1 cut(s) 352
MaeIII GTNAC 3 cut(s) 26, 116, 518
MalI GATC 3 cut(s) 240, 372, 507
MboI GATC 3 cut(s) 238, 370, 505
MboII GAAGA 6 cut(s) 83, 86, 245, 337, 455, 515
MflI RGATCY 1 cut(s) 238
MluCI AATT 4 cut(s) 187, 217, 285, 495
MnlI CCTC 6 cut(s) 95, 171, 206, 229, 494, 541
MseI TTAA 2 cut(s) 149, 284
MslI CAYNNNNRTG 2 cut(s) 549, 578
MspI CCGG 1 cut(s) 302
MspR9I CCNGG 1 cut(s) 303
NciI CCSGG 1 cut(s) 303
NdeII GATC 3 cut(s) 238, 370, 505
NlaIII CATG 4 cut(s) 91, 110, 548, 583
NlaIV GGNNCC 1 cut(s) 254
NmuCI GTSAC 2 cut(s) 26, 116
PagI TCATGA 1 cut(s) 544
PcsI WCGNNNNNNNCGW 1 cut(s) 455
PfeI GAWTC 3 cut(s) 124, 363, 424
PspN4I GGNNCC 1 cut(s) 254
PsuI RGATCY 1 cut(s) 238
RsaI GTAC 1 cut(s) 47
RsaNI GTAC 1 cut(s) 46
RseI CAYNNNNRTG 2 cut(s) 549, 578
SaqAI TTAA 2 cut(s) 149, 284
Sau3AI GATC 3 cut(s) 238, 370, 505
ScrFI CCNGG 1 cut(s) 303
SetI ASST 6 cut(s) 58, 106, 118, 182, 278, 564
SfaNI GCATC 1 cut(s) 352
SmiMI CAYNNNNRTG 2 cut(s) 549, 578
SmlI CTYRAG 1 cut(s) 526
SmoI CTYRAG 1 cut(s) 526
Sse9I AATT 4 cut(s) 187, 217, 285, 495
SspI AATATT 1 cut(s) 463
StyD4I CCNGG 1 cut(s) 301
TaaI ACNGT 2 cut(s) 67, 605
TaqI TCGA 3 cut(s) 307, 458, 468
TasI AATT 4 cut(s) 187, 217, 285, 495
TatI WGTACW 1 cut(s) 45
TfiI GAWTC 3 cut(s) 124, 363, 424
Tru1I TTAA 2 cut(s) 149, 284
Tru9I TTAA 2 cut(s) 149, 284
TscAI CASTG 2 cut(s) 125, 608
TseFI GTSAC 2 cut(s) 26, 116
Tsp45I GTSAC 2 cut(s) 26, 116
TspDTI ATGAA 3 cut(s) 200, 507, 533
TspGWI ACGGA 1 cut(s) 326
TspRI CASTG 2 cut(s) 125, 608
XapI RAATTY 1 cut(s) 495
XcmI CCANNNNNNNNNTGG 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.