AT5G23810

amino acid permease 7

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
8028238 .. 8030888
2651 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G23810.2

Sequence Viewer

Length: 1404 bp
ATGGACATTAAAGAAGATGACGAGTCTCGAGTTATAACACCAACCGAGCTTCAACTTCATGATTCAGTTACTGCAAGAACAGGAACGTTATGGACGGCGGTGGCACATATAATAACAGGAGTGATAGGAGCTGGAGTGTTGTCGTTGGCTTGGGCCACGGCGGAGCTCGGCTGGATCGCTGGTCCGGCCGCCCTTATAGCCTTCGCCGGGGTCACACTTCTCTCTGCTTTTCTTCTTTCCGATTGCTACCGTTTCCCTGATCCTAACAACGGTCCCCTCCGACTCAATTCTTACTCTCAAGCCGTTAAATTGTATTTAGGGAAGAAGAATGAAATTGTATGTGGAGTCGTTGTATACATTTCCCTTTTTGGTTGTGGCATTGCTTATACCATTGTTATAGCTACATGCAGTAGAGCAATTATGAAATCGAATTGTTATCATAGAAATGGACACAATGCAACATGTTCATATGGAGACAACAACAACTACTTCATGGTTTTGTTTGGTTTGACTCAGATATTTATGTCACAAATACCTAATTTCCACAACATGGTATGGCTCTCTCTTGTCGCCGCTATTATGTCTTTTACTTACTCGTTCATTGGCATCGGCCTCGCCCTTGGCAAAATCATAGAGAATCGAAAAATTGAGGGAAGTATAAGGGGAATACCAGCAGAAAACAGAGGTGAAAAGGTATGGATAGTGTTCCAAGCTCTTGGGAACATTGCCTTTTCATATCCTTTCTCAATCATACTTCTTGAGATTCAGGACACATTGAGATCACCACCGGCAGAGAAGCAAACGATGAAGAAAGCCTCGACGGTTGCGGTATTCATCCAAACATTCTTCTTCTTCTGTTGTGGATGTTTTGGGTACGCGGCCTTTGGAGATTCCACCCCGGGAAATCTCTTGACCGGTTTCGGCTTCTATGAGCCATTCTGGCTCGTCGATTTCGCCAACGCTTGCATTGTTCTTCATTTAGTTGGTGGATATCAGGTATACAGTCAACCAATTTTCGCGGCTGCGGAGAGATCGCTAACCAAGAAATATCCGGAAAATAAGTTTATCGCCAGATTCTACGGATTCAAACTGCCATTGTTGCGAGGAGAGACGGTGAGATTGAACCCAATGAGGATGTGTTTGAGAACGATGTACGTGTTGATCACAACGGGAGTGGCAGTGATGTTTCCCTACTTCAATGAAGTATTAGGAGTGGTGGGGGCACTTGCATTTTGGCCTCTGGCAGTGTATTTTCCTGTGGAGATGTGTATATTGCAGAAGAAAATCCGAAGTTGGACGCGACCATGGCTTCTTCTTAGAGGTTTCAGCTTTGTGTGCTTGCTCGTCTGTCTCTTGTCTCTTGTTGGATCTATTTATGGACTTGTTGGAGCTAAATTCGGATGA

Protein Analysis

467

Amino Acids

51.72

Weight (kDa)

8.9

Isoelectric Point (pI)

31.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 26 - 340 1.5e-74 Transmembrane amino acid transporter protein
Trp_Tyr_perm PF03222 29 - 199 1.9e-07 Tryptophan/tyrosine permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 35
AccB7I CCANNNNNTGG 1 cut(s) 550
AccI GTMKAC 2 cut(s) 354, 999
AccII CGCG 3 cut(s) 878, 1019, 1300
AccIII TCCGGA 1 cut(s) 1051
AciI CCGC 8 cut(s) 98, 161, 189, 573, 827, 878, 1019, 1025
AclI AACGTT 1 cut(s) 86
AclWI GGATC 3 cut(s) 182, 254, 1375
AcoI YGGCCR 1 cut(s) 186
AcsI RAATTY 1 cut(s) 1394
AfaI GTAC 2 cut(s) 875, 1154
AfiI CCNNNNNNNGG 3 cut(s) 207, 269, 550
AflIII ACRYGT 2 cut(s) 461, 1155
AgeI ACCGGT 1 cut(s) 914
AgsI TTSAA 4 cut(s) 53, 1087, 1123, 1198
AluBI AGCT 7 cut(s) 49, 131, 166, 401, 713, 1329, 1391
AluI AGCT 7 cut(s) 49, 131, 166, 401, 713, 1329, 1391
Alw21I GWGCWC 1 cut(s) 168
Alw26I GTCTC 5 cut(s) 30, 468, 1103, 1355, 1362
AlwI GGATC 3 cut(s) 182, 254, 1375
AlwNI CAGNNNCTG 1 cut(s) 71
Ama87I CYCGRG 2 cut(s) 27, 898
Aor13HI TCCGGA 1 cut(s) 1051
AoxI GGCC 5 cut(s) 153, 186, 610, 879, 1235
ApeKI GCWGC 1 cut(s) 1022
ApoI RAATTY 1 cut(s) 1394
AsiGI ACCGGT 1 cut(s) 914
AspS9I GGNCC 3 cut(s) 153, 182, 272
AsuC2I CCSGG 3 cut(s) 208, 899, 900
AsuHPI GGTGA 3 cut(s) 698, 774, 1126
AvaI CYCGRG 2 cut(s) 27, 898
AvaII GGWCC 2 cut(s) 182, 272
BaeGI GKGCMC 1 cut(s) 1225
BanII GRGCYC 1 cut(s) 168
Bbv12I GWGCWC 1 cut(s) 168
BbvI GCAGC 1 cut(s) 1009
BceAI ACGGC 3 cut(s) 111, 174, 287
BcgI CGANNNNNNTGC 2 cut(s) 595, 629
BclI TGATCA 1 cut(s) 1161
BcnI CCSGG 3 cut(s) 208, 899, 900
BcoDI GTCTC 5 cut(s) 30, 468, 1103, 1355, 1362
BglI GCCNNNNNGGC 1 cut(s) 940
BisI GCNGC 5 cut(s) 189, 573, 879, 1020, 1023
BlsI GCNGC 5 cut(s) 190, 574, 880, 1021, 1024
Bme1390I CCNGG 3 cut(s) 208, 899, 900
Bme18I GGWCC 2 cut(s) 182, 272
BmeT110I CYCGRG 2 cut(s) 27, 898
BmgT120I GGNCC 3 cut(s) 153, 182, 272
BmiI GGNNCC 1 cut(s) 274
BmrFI CCNGG 3 cut(s) 208, 899, 900
BmsI GCATC 1 cut(s) 615
BpmI CTGGAG 1 cut(s) 153
BpuEI CTTGAG 2 cut(s) 282, 779
BpuMI CCSGG 3 cut(s) 208, 899, 900
BsaAI YACGTR 1 cut(s) 1156
BsaJI CCNNGG 6 cut(s) 156, 207, 619, 897, 898, 1304
BsaWI WCCGGW 2 cut(s) 914, 1051
BsaXI ACNNNNNCTCC 8 cut(s) 120, 150, 336, 366, 1098, 1128, 1164, 1194
Bsc4I CCNNNNNNNGG 3 cut(s) 207, 269, 550
Bse118I RCCGGY 2 cut(s) 787, 914
Bse3DI GCAATG 2 cut(s) 378, 723
BseAI TCCGGA 1 cut(s) 1051
BseDI CCNNGG 6 cut(s) 156, 207, 619, 897, 898, 1304
BseGI GGATG 3 cut(s) 834, 869, 1140
BseLI CCNNNNNNNGG 3 cut(s) 207, 269, 550
BseMI GCAATG 2 cut(s) 378, 723
BseMII CTCAG 1 cut(s) 527
BseRI GAGGAG 1 cut(s) 1119
BseSI GKGCMC 1 cut(s) 1225
BseX3I CGGCCG 1 cut(s) 186
BseXI GCAGC 1 cut(s) 1009
Bsh1236I CGCG 3 cut(s) 878, 1019, 1300
Bsh1285I CGRYCG 1 cut(s) 189
BshFI GGCC 5 cut(s) 155, 188, 612, 881, 1237
BshTI ACCGGT 1 cut(s) 914
BsiEI CGRYCG 1 cut(s) 189
BsiHKAI GWGCWC 1 cut(s) 168
BsiHKCI CYCGRG 2 cut(s) 27, 898
BsiSI CCGG 6 cut(s) 185, 207, 788, 899, 915, 1052
BslFI GGGAC 1 cut(s) 258
BslI CCNNNNNNNGG 3 cut(s) 207, 269, 550
BsmAI GTCTC 5 cut(s) 30, 468, 1103, 1355, 1362
BsmBI CGTCTC 1 cut(s) 1103
BsmFI GGGAC 1 cut(s) 258
BsnI GGCC 5 cut(s) 155, 188, 612, 881, 1237
BsoBI CYCGRG 2 cut(s) 27, 898
Bsp1286I GDGCHC 2 cut(s) 168, 1225
Bsp13I TCCGGA 1 cut(s) 1051
Bsp143I GATC 6 cut(s) 174, 259, 779, 1031, 1161, 1367
Bsp19I CCATGG 1 cut(s) 1304
BspACI CCGC 8 cut(s) 98, 161, 189, 573, 827, 878, 1019, 1025
BspANI GGCC 5 cut(s) 155, 188, 612, 881, 1237
BspCNI CTCAG 1 cut(s) 526
BspEI TCCGGA 1 cut(s) 1051
BspFNI CGCG 3 cut(s) 878, 1019, 1300
BspHI TCATGA 1 cut(s) 58
BspLI GGNNCC 1 cut(s) 274
BspPI GGATC 3 cut(s) 182, 254, 1375
BsrDI GCAATG 2 cut(s) 378, 723
BsrFI RCCGGY 2 cut(s) 787, 914
BssAI RCCGGY 2 cut(s) 787, 914
BssECI CCNNGG 6 cut(s) 156, 207, 619, 897, 898, 1304
BssMI GATC 6 cut(s) 174, 259, 779, 1031, 1161, 1367
BssNAI GTATAC 2 cut(s) 355, 1000
BssT1I CCWWGG 2 cut(s) 619, 1304
Bst1107I GTATAC 2 cut(s) 355, 1000
Bst4CI ACNGT 5 cut(s) 251, 272, 823, 1004, 1114
BstBAI YACGTR 1 cut(s) 1156
BstC8I GCNNGC 2 cut(s) 964, 1340
BstDEI CTNAG 2 cut(s) 513, 1316
BstDSI CCRYGG 2 cut(s) 156, 1304
BstF5I GGATG 3 cut(s) 834, 869, 1140
BstFNI CGCG 3 cut(s) 878, 1019, 1300
BstKTI GATC 6 cut(s) 177, 262, 782, 1034, 1164, 1370
BstMAI GTCTC 5 cut(s) 30, 468, 1103, 1355, 1362
BstMBI GATC 6 cut(s) 174, 259, 779, 1031, 1161, 1367
BstMCI CGRYCG 1 cut(s) 189
BstMWI GCNNNNNNNGC 6 cut(s) 185, 197, 940, 1099, 1306, 1335
BstNSI RCATGY 2 cut(s) 408, 465
BstSCI CCNGG 3 cut(s) 206, 897, 898
BstSLI GKGCMC 1 cut(s) 1225
BstUI CGCG 3 cut(s) 878, 1019, 1300
BstV1I GCAGC 1 cut(s) 1009
BstX2I RGATCY 1 cut(s) 1367
BstXI CCANNNNNNTGG 1 cut(s) 716
BstYI RGATCY 1 cut(s) 1367
BstZ17I GTATAC 2 cut(s) 355, 1000
BstZI CGGCCG 1 cut(s) 186
BsuRI GGCC 5 cut(s) 155, 188, 612, 881, 1237
BtgI CCRYGG 2 cut(s) 156, 1304
BtsCI GGATG 3 cut(s) 834, 869, 1140
BtsI GCAGTG 2 cut(s) 1185, 1251
BtsIMutI CAGTG 2 cut(s) 1185, 1251
Cac8I GCNNGC 2 cut(s) 964, 1340
CaiI CAGNNNCTG 1 cut(s) 71
CciI TCATGA 1 cut(s) 58
Cfr10I RCCGGY 2 cut(s) 787, 914
Cfr13I GGNCC 3 cut(s) 153, 182, 272
Cfr9I CCCGGG 1 cut(s) 898
CseI GACGC 1 cut(s) 1306
Csp6I GTAC 2 cut(s) 874, 1153
CspAI ACCGGT 1 cut(s) 914
CspCI CAANNNNNGTGG 2 cut(s) 1155, 1190
CviAII CATG 6 cut(s) 59, 405, 462, 493, 550, 1305
CviQI GTAC 2 cut(s) 874, 1153
DdeI CTNAG 2 cut(s) 513, 1316
DpnI GATC 6 cut(s) 176, 261, 781, 1033, 1163, 1369
DpnII GATC 6 cut(s) 174, 259, 779, 1031, 1161, 1367
EaeI YGGCCR 1 cut(s) 186
EagI CGGCCG 1 cut(s) 186
EciI GGCGGA 1 cut(s) 176
Ecl136II GAGCTC 1 cut(s) 166
EclXI CGGCCG 1 cut(s) 186
Eco130I CCWWGG 2 cut(s) 619, 1304
Eco24I GRGCYC 1 cut(s) 168
Eco32I GATATC 1 cut(s) 992
Eco47I GGWCC 2 cut(s) 182, 272
Eco52I CGGCCG 1 cut(s) 186
Eco53kI GAGCTC 1 cut(s) 166
Eco88I CYCGRG 2 cut(s) 27, 898
EcoICRI GAGCTC 1 cut(s) 166
EcoRV GATATC 1 cut(s) 992
EcoT14I CCWWGG 2 cut(s) 619, 1304
EcoT38I GRGCYC 1 cut(s) 168
ErhI CCWWGG 2 cut(s) 619, 1304
Esp3I CGTCTC 1 cut(s) 1103
FaeI CATG 6 cut(s) 62, 408, 465, 496, 553, 1308
FaqI GGGAC 1 cut(s) 258
FatI CATG 6 cut(s) 58, 404, 461, 492, 549, 1304
FauNDI CATATG 1 cut(s) 469
FbaI TGATCA 1 cut(s) 1161
FblI GTMKAC 2 cut(s) 354, 999
Fnu4HI GCNGC 5 cut(s) 189, 573, 879, 1020, 1023
FokI GGATG 3 cut(s) 821, 876, 1147
FriOI GRGCYC 1 cut(s) 168
Fsp4HI GCNGC 5 cut(s) 189, 573, 879, 1020, 1023
GluI GCNGC 5 cut(s) 189, 573, 879, 1020, 1023
GsuI CTGGAG 1 cut(s) 153
HaeIII GGCC 5 cut(s) 155, 188, 612, 881, 1237
HapII CCGG 6 cut(s) 185, 207, 788, 899, 915, 1052
HgaI GACGC 1 cut(s) 1306
Hin1II CATG 6 cut(s) 62, 408, 465, 496, 553, 1308
HincII GTYRAC 1 cut(s) 1007
HindII GTYRAC 1 cut(s) 1007
HpaII CCGG 6 cut(s) 185, 207, 788, 899, 915, 1052
HphI GGTGA 3 cut(s) 698, 774, 1126
Hpy166II GTNNAC 3 cut(s) 355, 1000, 1007
Hpy188I TCNGA 5 cut(s) 241, 281, 516, 1289, 1400
Hpy188III TCNNGA 6 cut(s) 27, 59, 758, 767, 910, 1052
Hpy8I GTNNAC 3 cut(s) 355, 1000, 1007
Hpy99I CGWCG 2 cut(s) 823, 950
HpyAV CCTTC 1 cut(s) 211
HpyCH4III ACNGT 5 cut(s) 251, 272, 823, 1004, 1114
HpyCH4IV ACGT 2 cut(s) 86, 1155
HpyCH4V TGCA 6 cut(s) 74, 408, 458, 966, 1229, 1276
HpyF10VI GCNNNNNNNGC 6 cut(s) 185, 197, 940, 1099, 1306, 1335
HpyF3I CTNAG 2 cut(s) 513, 1316
HpySE526I ACGT 2 cut(s) 86, 1155
Hsp92II CATG 6 cut(s) 62, 408, 465, 496, 553, 1308
Kpn2I TCCGGA 1 cut(s) 1051
Ksp22I TGATCA 1 cut(s) 1161
Kzo9I GATC 6 cut(s) 174, 259, 779, 1031, 1161, 1367
LmnI GCTCC 3 cut(s) 128, 163, 1388
Lsp1109I GCAGC 1 cut(s) 1009
LweI GCATC 1 cut(s) 615
MaeII ACGT 2 cut(s) 86, 1155
MaeIII GTNAC 3 cut(s) 67, 211, 525
MalI GATC 6 cut(s) 176, 261, 781, 1033, 1163, 1369
MboI GATC 6 cut(s) 174, 259, 779, 1031, 1161, 1367
MflI RGATCY 1 cut(s) 1367
MhlI GDGCHC 2 cut(s) 168, 1225
MluCI AATT 9 cut(s) 286, 308, 333, 417, 430, 538, 645, 1011, 1394
MlyI GAGTC 4 cut(s) 32, 276, 354, 505
MmeI TCCRAC 4 cut(s) 304, 1274, 1345, 1366
MnlI CCTC 9 cut(s) 287, 623, 643, 677, 826, 1097, 1125, 1248, 1313
MroI TCCGGA 1 cut(s) 1051
MseI TTAA 2 cut(s) 9, 306
MslI CAYNNNNRTG 1 cut(s) 444
MspI CCGG 6 cut(s) 185, 207, 788, 899, 915, 1052
MspR9I CCNGG 3 cut(s) 208, 899, 900
MvnI CGCG 3 cut(s) 878, 1019, 1300
MwoI GCNNNNNNNGC 6 cut(s) 185, 197, 940, 1099, 1306, 1335
NciI CCSGG 3 cut(s) 208, 899, 900
NcoI CCATGG 1 cut(s) 1304
NdeI CATATG 1 cut(s) 469
NdeII GATC 6 cut(s) 174, 259, 779, 1031, 1161, 1367
NlaIII CATG 6 cut(s) 62, 408, 465, 496, 553, 1308
NlaIV GGNNCC 1 cut(s) 274
NmeAIII GCCGAG 1 cut(s) 147
NmuCI GTSAC 2 cut(s) 211, 525
NspI RCATGY 2 cut(s) 408, 465
PaeR7I CTCGAG 1 cut(s) 27
PagI TCATGA 1 cut(s) 58
PciI ACATGT 1 cut(s) 461
PfeI GAWTC 6 cut(s) 62, 637, 763, 890, 1074, 1083
PflMI CCANNNNNTGG 1 cut(s) 550
PinAI ACCGGT 1 cut(s) 914
PkrI GCNGC 5 cut(s) 190, 574, 880, 1021, 1024
PleI GAGTC 4 cut(s) 31, 276, 353, 505
PpsI GAGTC 4 cut(s) 31, 276, 353, 505
Ppu21I YACGTR 1 cut(s) 1156
PscI ACATGT 1 cut(s) 461
PsiI TTATAA 1 cut(s) 35
Psp124BI GAGCTC 1 cut(s) 168
Psp1406I AACGTT 1 cut(s) 86
PspN4I GGNNCC 1 cut(s) 274
PspPI GGNCC 3 cut(s) 153, 182, 272
PstNI CAGNNNCTG 1 cut(s) 71
PsuI RGATCY 1 cut(s) 1367
RsaI GTAC 2 cut(s) 875, 1154
RsaNI GTAC 2 cut(s) 874, 1153
RseI CAYNNNNRTG 1 cut(s) 444
SacI GAGCTC 1 cut(s) 168
SaqAI TTAA 2 cut(s) 9, 306
SatI GCNGC 5 cut(s) 189, 573, 879, 1020, 1023
Sau3AI GATC 6 cut(s) 174, 259, 779, 1031, 1161, 1367
Sau96I GGNCC 3 cut(s) 153, 182, 272
SchI GAGTC 4 cut(s) 32, 276, 354, 505
ScrFI CCNGG 3 cut(s) 208, 899, 900
SduI GDGCHC 2 cut(s) 168, 1225
SfaNI GCATC 1 cut(s) 615
Sfr274I CTCGAG 1 cut(s) 27
SinI GGWCC 2 cut(s) 182, 272
SlaI CTCGAG 1 cut(s) 27
SmaI CCCGGG 1 cut(s) 900
SmiMI CAYNNNNRTG 1 cut(s) 444
SmlI CTYRAG 3 cut(s) 27, 297, 758
SmoI CTYRAG 3 cut(s) 27, 297, 758
Sse9I AATT 9 cut(s) 286, 308, 333, 417, 430, 538, 645, 1011, 1394
SsiI CCGC 8 cut(s) 98, 161, 189, 573, 827, 878, 1019, 1025
SstI GAGCTC 1 cut(s) 168
StyD4I CCNGG 3 cut(s) 206, 897, 898
StyI CCWWGG 2 cut(s) 619, 1304
TaaI ACNGT 5 cut(s) 251, 272, 823, 1004, 1114
TaiI ACGT 2 cut(s) 89, 1158
TaqI TCGA 5 cut(s) 28, 428, 640, 818, 948
TasI AATT 9 cut(s) 286, 308, 333, 417, 430, 538, 645, 1011, 1394
TauI GCSGC 4 cut(s) 191, 575, 881, 1022
TfiI GAWTC 6 cut(s) 62, 637, 763, 890, 1074, 1083
Tru1I TTAA 2 cut(s) 9, 306
Tru9I TTAA 2 cut(s) 9, 306
TscAI CASTG 2 cut(s) 1185, 1251
TseFI GTSAC 2 cut(s) 211, 525
TseI GCWGC 1 cut(s) 1022
Tsp45I GTSAC 2 cut(s) 211, 525
TspGWI ACGGA 1 cut(s) 1095
TspMI CCCGGG 1 cut(s) 898
TspRI CASTG 2 cut(s) 1185, 1251
Van91I CCANNNNNTGG 1 cut(s) 550
VpaK11BI GGWCC 2 cut(s) 182, 272
XapI RAATTY 1 cut(s) 1394
XceI RCATGY 2 cut(s) 408, 465
XhoI CTCGAG 1 cut(s) 27
XmaI CCCGGG 1 cut(s) 898
XmiI GTMKAC 2 cut(s) 354, 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.