pycom11g03550

Amino acid permease

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
2738748 .. 2753241
14494 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g03550.7

Sequence Viewer

Length: 1386 bp
ATGGGTGTTGGTGAAGCAGCAGAAGATCAGCAGTTACCGCTGCTCATAAGTTCTTCATCAAATGAACGCAACCAACCTCTCAAAAGAACTGGTACAGGAACTCTACCGACTGCAGTAGCACATATAATAACAGGCGTGATAGGAGCAGGAGTATTATCCCTTGCATGGAGTGTGGCTCAGCTAGGGTGGATTGGAGGTCCATTGCTTATGCTTGTATTTGCTTCAGTCACCATTCTTTCCACCAACCTCCTCTCCGACTGCTACCGGTACCCCGAATCCGATAGCCCGACGAGGGTCGGATCCTACTTAGAAGCTGTCAAGGTCTACCTAGGAGAGAAGAGTCAGACAGTGTGTGCAATATTTGTACAGGAGAGCCTGTATGGCACCGGGATTGCCTACGTTATTACAGCTGCTGGCAGCGTCAAAGCCATTCAGAGATCCAACTGCTACCACAAAGAAGGGCATGAGGCTTCATGTGAATATGGAACTAGTCTGTATATGCTGCTATTTGGACTTGTCCAGATTGTTATGTCACAAATACCAGATTTCCACAACATGGAATGGCTTTCAGTTATTGCAGCAATCATGTCCTTTACCTACTCTTTCATTGGACTTGGCCTCGGCTTTGCGAAAGTAATAGAAAATGGGAAGATTCAAGGAAGCCTAACAGGAGTTCCAACATCAAATGTTGCTGATAAATTATGGTTGGCCTTCCAAGCACTTGGAGACATTGCTTTTGCCTACCCATACTCTATTATTGTTCTTGAAATTCAGGATACTTTGAAGTCCCCTCCACCCGAAAATCAGACAATGAAGAAGGCCTCAAAGATTGCCATATTTGTCACAACCTTCTTCTACCTCTGCTGTGGATGCTTTGGATATGCCGCCTTTGGGGATGACACGCCAGGGAACCTCTTGACAGGATTTGGATTCTACGAACCCTACTGGCTCATTGATTTTGCCAATGCTTGTATTGTTCTTCATTTGGTGGGAGGATATCAGATCTTCAGTCAACCAGTATTTGCAGTTGCTGAGAGATGGTCTAGGAAGAAATACCCGAGCAGTGGATTTGTGAACAACTTTTACTCTATCAAAGTCCCATTGTTACCGAGATTTCAAGTGAATCCCTTCAGGCTGTGTTTCCGTACTGTTTACGTTGTGTCAACTACCGCAATTGCGATGATATTTCCTTACTTCAATCAGGTTTTGGGAGTTTTAGGGGCCTTGAACTTTTGGCCTTTGGCCATATATTTCCCTGTAGAAATGTACTTTGTACAGAAGAAAATTGGGGCTTGGACAAAAACATGGGTTGTTCTGAGGACATTTAGTTTAGCTTGCTTTCTTGTGACAGTTGTGGGTGTGATCGATCAGTTGAAGGACTTATAA

Protein Analysis

462

Amino Acids

50.72

Weight (kDa)

7.48

Isoelectric Point (pI)

30.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1384
Acc65I GGTACC 1 cut(s) 267
AccB1I GGYRCC 2 cut(s) 267, 383
AccB7I CCANNNNNTGG 1 cut(s) 556
AccI GTMKAC 1 cut(s) 324
AciI CCGC 3 cut(s) 38, 885, 1170
AclWI GGATC 3 cut(s) 294, 307, 432
AcoI YGGCCR 1 cut(s) 1242
AcsI RAATTY 1 cut(s) 768
AcuI CTGAAG 3 cut(s) 207, 991, 1114
AfaI GTAC 6 cut(s) 94, 269, 366, 1147, 1268, 1275
AfiI CCNNNNNNNGG 5 cut(s) 165, 292, 556, 891, 1064
AgeI ACCGGT 1 cut(s) 264
AgsI TTSAA 7 cut(s) 656, 767, 784, 1118, 1198, 1228, 1375
AhlI ACTAGT 1 cut(s) 488
AjnI CCWGG 1 cut(s) 904
AluBI AGCT 4 cut(s) 181, 314, 410, 1334
AluI AGCT 4 cut(s) 181, 314, 410, 1334
Alw26I GTCTC 1 cut(s) 720
AlwI GGATC 3 cut(s) 294, 307, 432
AlwNI CAGNNNCTG 2 cut(s) 413, 1031
Ama87I CYCGRG 1 cut(s) 1057
AoxI GGCC 6 cut(s) 616, 708, 819, 1221, 1235, 1242
ApeKI GCWGC 6 cut(s) 17, 40, 410, 417, 502, 578
ApoI RAATTY 1 cut(s) 768
ArsI GACNNNNNNTTYG 2 cut(s) 719, 751
AsiGI ACCGGT 1 cut(s) 264
Asp700I GAANNNNTTC 1 cut(s) 1127
Asp718I GGTACC 1 cut(s) 267
AspA2I CCTAGG 1 cut(s) 328
AspS9I GGNCC 2 cut(s) 197, 1221
AsuC2I CCSGG 1 cut(s) 388
AsuHPI GGTGA 2 cut(s) 23, 220
AvaI CYCGRG 1 cut(s) 1057
AvaII GGWCC 1 cut(s) 197
AvrII CCTAGG 1 cut(s) 328
BalI TGGCCA 1 cut(s) 1244
BamHI GGATCC 1 cut(s) 299
BanI GGYRCC 2 cut(s) 267, 383
BbvI GCAGC 6 cut(s) 27, 29, 397, 429, 489, 590
BccI CCATC 1 cut(s) 1032
BciT130I CCWGG 1 cut(s) 906
BciVI GTATCC 1 cut(s) 769
BcnI CCSGG 1 cut(s) 388
BcoDI GTCTC 1 cut(s) 720
BcuI ACTAGT 1 cut(s) 488
BfaI CTAG 4 cut(s) 182, 329, 489, 1044
BfmI CTRYAG 2 cut(s) 111, 1257
BfuI GTATCC 1 cut(s) 769
BglI GCCNNNNNGGC 1 cut(s) 381
BglII AGATCT 1 cut(s) 1002
BisI GCNGC 7 cut(s) 18, 41, 411, 418, 503, 579, 885
BlnI CCTAGG 1 cut(s) 328
BlpI GCTNAGC 1 cut(s) 177
BlsI GCNGC 7 cut(s) 19, 42, 412, 419, 504, 580, 886
Bme1390I CCNGG 2 cut(s) 388, 906
Bme18I GGWCC 1 cut(s) 197
BmeT110I CYCGRG 1 cut(s) 1057
BmgT120I GGNCC 2 cut(s) 197, 1221
BmiI GGNNCC 5 cut(s) 269, 301, 385, 911, 1222
BmrFI CCNGG 2 cut(s) 388, 906
BmsI GCATC 1 cut(s) 860
BoxI GACNNNNGTC 1 cut(s) 293
BplI GAGNNNNNCTC 2 cut(s) 160, 192
Bpu1102I GCTNAGC 1 cut(s) 177
BpuMI CCSGG 1 cut(s) 388
Bsa29I ATCGAT 1 cut(s) 1365
BsaJI CCNNGG 3 cut(s) 328, 619, 905
BsaWI WCCGGW 1 cut(s) 264
BsaXI ACNNNNNCTCC 6 cut(s) 135, 165, 236, 266, 362, 392
Bsc4I CCNNNNNNNGG 5 cut(s) 165, 292, 556, 891, 1064
Bse118I RCCGGY 1 cut(s) 264
Bse1I ACTGG 3 cut(s) 94, 950, 1016
Bse3DI GCAATG 2 cut(s) 200, 729
BseBI CCWGG 1 cut(s) 906
BseCI ATCGAT 1 cut(s) 1365
BseDI CCNNGG 3 cut(s) 328, 619, 905
BseGI GGATG 2 cut(s) 875, 901
BseLI CCNNNNNNNGG 5 cut(s) 165, 292, 556, 891, 1064
BseMI GCAATG 2 cut(s) 200, 729
BseMII CTCAG 3 cut(s) 191, 1023, 1307
BseNI ACTGG 3 cut(s) 94, 950, 1016
BseRI GAGGAG 1 cut(s) 239
BseXI GCAGC 6 cut(s) 27, 29, 397, 429, 489, 590
BshFI GGCC 6 cut(s) 618, 710, 821, 1223, 1237, 1244
BshNI GGYRCC 2 cut(s) 267, 383
BshTI ACCGGT 1 cut(s) 264
BshVI ATCGAT 1 cut(s) 1365
BsiHKCI CYCGRG 1 cut(s) 1057
BsiSI CCGG 2 cut(s) 265, 387
BslFI GGGAC 2 cut(s) 772, 1082
BslI CCNNNNNNNGG 5 cut(s) 165, 292, 556, 891, 1064
BsmAI GTCTC 1 cut(s) 720
BsmFI GGGAC 2 cut(s) 772, 1082
BsnI GGCC 6 cut(s) 618, 710, 821, 1223, 1237, 1244
BsoBI CYCGRG 1 cut(s) 1057
Bsp1407I TGTACA 2 cut(s) 364, 1273
Bsp143I GATC 6 cut(s) 25, 299, 437, 1002, 1362, 1366
Bsp1720I GCTNAGC 1 cut(s) 177
BspACI CCGC 3 cut(s) 38, 885, 1170
BspANI GGCC 6 cut(s) 618, 710, 821, 1223, 1237, 1244
BspCNI CTCAG 3 cut(s) 190, 1024, 1308
BspDI ATCGAT 1 cut(s) 1365
BspLI GGNNCC 5 cut(s) 269, 301, 385, 911, 1222
BspMAI CTGCAG 1 cut(s) 115
BspPI GGATC 3 cut(s) 294, 307, 432
BspT107I GGYRCC 2 cut(s) 267, 383
BsrDI GCAATG 2 cut(s) 200, 729
BsrFI RCCGGY 1 cut(s) 264
BsrGI TGTACA 2 cut(s) 364, 1273
BsrI ACTGG 3 cut(s) 94, 950, 1016
BssAI RCCGGY 1 cut(s) 264
BssECI CCNNGG 3 cut(s) 328, 619, 905
BssMI GATC 6 cut(s) 25, 299, 437, 1002, 1362, 1366
BssT1I CCWWGG 1 cut(s) 328
Bst2UI CCWGG 1 cut(s) 906
Bst4CI ACNGT 3 cut(s) 349, 1150, 1351
Bst6I CTCTTC 1 cut(s) 332
BstAUI TGTACA 2 cut(s) 364, 1273
BstC8I GCNNGC 2 cut(s) 415, 1336
BstDEI CTNAG 4 cut(s) 177, 307, 1032, 1316
BstF5I GGATG 2 cut(s) 875, 901
BstKTI GATC 6 cut(s) 28, 302, 440, 1005, 1365, 1369
BstMAI GTCTC 1 cut(s) 720
BstMBI GATC 6 cut(s) 25, 299, 437, 1002, 1362, 1366
BstMWI GCNNNNNNNGC 4 cut(s) 37, 381, 716, 870
BstNI CCWGG 1 cut(s) 906
BstPAI GACNNNNGTC 1 cut(s) 293
BstSCI CCNGG 2 cut(s) 386, 904
BstSFI CTRYAG 2 cut(s) 111, 1257
BstV1I GCAGC 6 cut(s) 27, 29, 397, 429, 489, 590
BstX2I RGATCY 3 cut(s) 299, 437, 1002
BstXI CCANNNNNNTGG 1 cut(s) 722
BstYI RGATCY 3 cut(s) 299, 437, 1002
Bsu15I ATCGAT 1 cut(s) 1365
BsuI GTATCC 1 cut(s) 769
BsuRI GGCC 6 cut(s) 618, 710, 821, 1223, 1237, 1244
BsuTUI ATCGAT 1 cut(s) 1365
BtgZI GCGATG 1 cut(s) 1193
BtsCI GGATG 2 cut(s) 875, 901
BtsI GCAGTG 1 cut(s) 1069
BtsIMutI CAGTG 2 cut(s) 354, 1069
Cac8I GCNNGC 2 cut(s) 415, 1336
CaiI CAGNNNCTG 2 cut(s) 413, 1031
Cfr10I RCCGGY 1 cut(s) 264
Cfr13I GGNCC 2 cut(s) 197, 1221
ClaI ATCGAT 1 cut(s) 1365
CseI GACGC 1 cut(s) 409
Csp6I GTAC 6 cut(s) 93, 268, 365, 1146, 1267, 1274
CspAI ACCGGT 1 cut(s) 264
CviAII CATG 6 cut(s) 165, 464, 474, 556, 586, 1305
CviQI GTAC 6 cut(s) 93, 268, 365, 1146, 1267, 1274
DdeI CTNAG 4 cut(s) 177, 307, 1032, 1316
DpnI GATC 6 cut(s) 27, 301, 439, 1004, 1364, 1368
DpnII GATC 6 cut(s) 25, 299, 437, 1002, 1362, 1366
EaeI YGGCCR 1 cut(s) 1242
Eam1104I CTCTTC 1 cut(s) 332
EarI CTCTTC 1 cut(s) 332
Eco130I CCWWGG 1 cut(s) 328
Eco147I AGGCCT 1 cut(s) 821
Eco32I GATATC 1 cut(s) 998
Eco47I GGWCC 1 cut(s) 197
Eco57I CTGAAG 3 cut(s) 207, 991, 1114
Eco88I CYCGRG 1 cut(s) 1057
EcoO109I RGGNCCY 1 cut(s) 1221
EcoRII CCWGG 1 cut(s) 904
EcoRV GATATC 1 cut(s) 998
EcoT14I CCWWGG 1 cut(s) 328
ErhI CCWWGG 1 cut(s) 328
FaeI CATG 6 cut(s) 168, 467, 477, 559, 589, 1308
FaqI GGGAC 2 cut(s) 772, 1082
FatI CATG 6 cut(s) 164, 463, 473, 555, 585, 1304
FblI GTMKAC 1 cut(s) 324
Fnu4HI GCNGC 7 cut(s) 18, 41, 411, 418, 503, 579, 885
FokI GGATG 2 cut(s) 882, 908
Fsp4HI GCNGC 7 cut(s) 18, 41, 411, 418, 503, 579, 885
FspBI CTAG 4 cut(s) 182, 329, 489, 1044
GluI GCNGC 7 cut(s) 18, 41, 411, 418, 503, 579, 885
HaeIII GGCC 6 cut(s) 618, 710, 821, 1223, 1237, 1244
HapII CCGG 2 cut(s) 265, 387
HgaI GACGC 1 cut(s) 409
Hin1II CATG 6 cut(s) 168, 467, 477, 559, 589, 1308
HincII GTYRAC 2 cut(s) 1013, 1164
HindII GTYRAC 2 cut(s) 1013, 1164
HinfI GANTC 5 cut(s) 275, 340, 652, 930, 1123
HpaII CCGG 2 cut(s) 265, 387
HphI GGTGA 2 cut(s) 23, 220
Hpy166II GTNNAC 5 cut(s) 325, 1013, 1075, 1153, 1164
Hpy188I TCNGA 8 cut(s) 256, 280, 299, 345, 435, 807, 1002, 1317
Hpy188III TCNNGA 4 cut(s) 520, 764, 773, 916
Hpy8I GTNNAC 5 cut(s) 325, 1013, 1075, 1153, 1164
Hpy99I CGWCG 1 cut(s) 292
HpyAV CCTTC 6 cut(s) 452, 721, 811, 859, 1138, 1369
HpyCH4III ACNGT 3 cut(s) 349, 1150, 1351
HpyCH4IV ACGT 2 cut(s) 399, 1155
HpyCH4V TGCA 5 cut(s) 113, 164, 356, 578, 1025
HpyF10VI GCNNNNNNNGC 4 cut(s) 37, 381, 716, 870
HpyF3I CTNAG 4 cut(s) 177, 307, 1032, 1316
HpySE526I ACGT 2 cut(s) 399, 1155
Hsp92II CATG 6 cut(s) 168, 467, 477, 559, 589, 1308
KpnI GGTACC 1 cut(s) 271
Kzo9I GATC 6 cut(s) 25, 299, 437, 1002, 1362, 1366
LmnI GCTCC 1 cut(s) 143
Lsp1109I GCAGC 6 cut(s) 27, 29, 397, 429, 489, 590
LweI GCATC 1 cut(s) 860
MaeI CTAG 4 cut(s) 182, 329, 489, 1044
MaeII ACGT 2 cut(s) 399, 1155
MaeIII GTNAC 6 cut(s) 33, 226, 531, 841, 1104, 1345
MalI GATC 6 cut(s) 27, 301, 439, 1004, 1364, 1368
MboI GATC 6 cut(s) 25, 299, 437, 1002, 1362, 1366
MfeI CAATTG 1 cut(s) 1173
MflI RGATCY 3 cut(s) 299, 437, 1002
MlsI TGGCCA 1 cut(s) 1244
MluCI AATT 4 cut(s) 698, 768, 1173, 1284
MluNI TGGCCA 1 cut(s) 1244
MlyI GAGTC 1 cut(s) 349
MmeI TCCRAC 4 cut(s) 277, 279, 465, 701
Mox20I TGGCCA 1 cut(s) 1244
MroXI GAANNNNTTC 1 cut(s) 1127
MscI TGGCCA 1 cut(s) 1244
Msp20I TGGCCA 1 cut(s) 1244
MspA1I CMGCKG 2 cut(s) 40, 410
MspI CCGG 2 cut(s) 265, 387
MspR9I CCNGG 2 cut(s) 388, 906
MunI CAATTG 1 cut(s) 1173
MvaI CCWGG 1 cut(s) 906
MwoI GCNNNNNNNGC 4 cut(s) 37, 381, 716, 870
NciI CCSGG 1 cut(s) 388
NdeII GATC 6 cut(s) 25, 299, 437, 1002, 1362, 1366
NlaIII CATG 6 cut(s) 168, 467, 477, 559, 589, 1308
NlaIV GGNNCC 5 cut(s) 269, 301, 385, 911, 1222
NmeAIII GCCGAG 1 cut(s) 600
NmuCI GTSAC 4 cut(s) 226, 531, 841, 1345
PceI AGGCCT 1 cut(s) 821
PdmI GAANNNNTTC 1 cut(s) 1127
PfeI GAWTC 4 cut(s) 275, 652, 930, 1123
PflMI CCANNNNNTGG 1 cut(s) 556
PinAI ACCGGT 1 cut(s) 264
PkrI GCNGC 7 cut(s) 19, 42, 412, 419, 504, 580, 886
PleI GAGTC 1 cut(s) 348
PpsI GAGTC 1 cut(s) 348
PshAI GACNNNNGTC 1 cut(s) 293
PsiI TTATAA 1 cut(s) 1384
Psp6I CCWGG 1 cut(s) 904
PspGI CCWGG 1 cut(s) 904
PspN4I GGNNCC 5 cut(s) 269, 301, 385, 911, 1222
PspPI GGNCC 2 cut(s) 197, 1221
PsrI GAACNNNNNNTAC 2 cut(s) 1067, 1099
PstI CTGCAG 1 cut(s) 115
PstNI CAGNNNCTG 2 cut(s) 413, 1031
PsuI RGATCY 3 cut(s) 299, 437, 1002
PvuII CAGCTG 1 cut(s) 410
RsaI GTAC 6 cut(s) 94, 269, 366, 1147, 1268, 1275
RsaNI GTAC 6 cut(s) 93, 268, 365, 1146, 1267, 1274
SatI GCNGC 7 cut(s) 18, 41, 411, 418, 503, 579, 885
Sau3AI GATC 6 cut(s) 25, 299, 437, 1002, 1362, 1366
Sau96I GGNCC 2 cut(s) 197, 1221
SchI GAGTC 1 cut(s) 349
ScrFI CCNGG 2 cut(s) 388, 906
SfaNI GCATC 1 cut(s) 860
SfcI CTRYAG 2 cut(s) 111, 1257
SinI GGWCC 1 cut(s) 197
SpeI ACTAGT 1 cut(s) 488
Sse9I AATT 4 cut(s) 698, 768, 1173, 1284
SseBI AGGCCT 1 cut(s) 821
SsiI CCGC 3 cut(s) 38, 885, 1170
SspI AATATT 1 cut(s) 360
SspMI CTAG 4 cut(s) 182, 329, 489, 1044
StuI AGGCCT 1 cut(s) 821
StyD4I CCNGG 2 cut(s) 386, 904
StyI CCWWGG 1 cut(s) 328
TaaI ACNGT 3 cut(s) 349, 1150, 1351
TaiI ACGT 2 cut(s) 402, 1158
TaqI TCGA 1 cut(s) 1365
TasI AATT 4 cut(s) 698, 768, 1173, 1284
TatI WGTACW 3 cut(s) 364, 1266, 1273
TauI GCSGC 1 cut(s) 887
TfiI GAWTC 4 cut(s) 275, 652, 930, 1123
TscAI CASTG 2 cut(s) 354, 1069
TseFI GTSAC 4 cut(s) 226, 531, 841, 1345
TseI GCWGC 6 cut(s) 17, 40, 410, 417, 502, 578
Tsp45I GTSAC 4 cut(s) 226, 531, 841, 1345
TspDTI ATGAA 6 cut(s) 45, 78, 462, 595, 827, 971
TspGWI ACGGA 1 cut(s) 1133
TspRI CASTG 2 cut(s) 354, 1069
Van91I CCANNNNNTGG 1 cut(s) 556
VpaK11BI GGWCC 1 cut(s) 197
XapI RAATTY 1 cut(s) 768
XmaJI CCTAGG 1 cut(s) 328
XmiI GTMKAC 1 cut(s) 324
XmnI GAANNNNTTC 1 cut(s) 1127
XspI CTAG 4 cut(s) 182, 329, 489, 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.